View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0778_low_15 (Length: 511)

Name: NF0778_low_15
Description: NF0778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0778_low_15
NF0778_low_15
[»] chr2 (30 HSPs)
chr2 (1-464)||(387013-387475)
chr2 (116-436)||(39338673-39338992)
chr2 (116-437)||(10524051-10524375)
chr2 (148-433)||(7874278-7874561)
chr2 (143-433)||(14106332-14106623)
chr2 (160-392)||(14405197-14405429)
chr2 (168-464)||(5254263-5254552)
chr2 (198-436)||(17116686-17116923)
chr2 (326-433)||(7460839-7460947)
chr2 (173-276)||(4471935-4472035)
chr2 (161-283)||(10173539-10173659)
chr2 (168-245)||(1269490-1269567)
chr2 (173-267)||(22885111-22885202)
chr2 (168-243)||(16959989-16960064)
chr2 (160-307)||(37770580-37770723)
chr2 (172-245)||(2062900-2062973)
chr2 (173-245)||(13337286-13337358)
chr2 (173-245)||(15126407-15126479)
chr2 (182-464)||(16952163-16952443)
chr2 (182-464)||(17022828-17023108)
chr2 (182-464)||(17060134-17060414)
chr2 (173-236)||(36276178-36276240)
chr2 (183-245)||(7695985-7696047)
chr2 (173-210)||(4162052-4162089)
chr2 (160-220)||(23650384-23650444)
chr2 (173-213)||(27739987-27740027)
chr2 (173-221)||(33788653-33788701)
chr2 (176-247)||(18681080-18681151)
chr2 (182-275)||(17079190-17079281)
chr2 (179-245)||(34230219-34230285)
[»] chr3 (35 HSPs)
chr3 (158-464)||(43012372-43012676)
chr3 (148-460)||(19176489-19176801)
chr3 (116-434)||(20611737-20612054)
chr3 (117-436)||(2392313-2392632)
chr3 (148-448)||(9583851-9584147)
chr3 (143-433)||(23328160-23328449)
chr3 (117-464)||(34475540-34475880)
chr3 (192-464)||(47235729-47235997)
chr3 (148-464)||(40023351-40023666)
chr3 (143-464)||(45163835-45164153)
chr3 (173-408)||(17550969-17551198)
chr3 (143-464)||(45398778-45399098)
chr3 (208-464)||(53247947-53248199)
chr3 (117-436)||(2394077-2394379)
chr3 (157-392)||(31482880-31483113)
chr3 (326-436)||(30352248-30352356)
chr3 (168-221)||(14755286-14755339)
chr3 (168-245)||(47945713-47945790)
chr3 (229-363)||(21342603-21342735)
chr3 (173-294)||(33143899-33144018)
chr3 (353-462)||(7105031-7105140)
chr3 (176-245)||(37123397-37123466)
chr3 (176-245)||(39021273-39021342)
chr3 (149-245)||(1652883-1652979)
chr3 (168-212)||(14879442-14879486)
chr3 (160-230)||(14193939-14194009)
chr3 (173-230)||(30127274-30127332)
chr3 (173-230)||(5556582-5556639)
chr3 (173-210)||(20710740-20710777)
chr3 (173-230)||(2782081-2782138)
chr3 (176-245)||(30935387-30935456)
chr3 (179-243)||(823434-823498)
chr3 (173-209)||(24099360-24099396)
chr3 (173-229)||(31424248-31424304)
chr3 (432-464)||(32010030-32010062)
[»] chr4 (32 HSPs)
chr4 (116-464)||(8254981-8255326)
chr4 (116-464)||(8268399-8268744)
chr4 (116-464)||(30964395-30964736)
chr4 (143-426)||(31050478-31050761)
chr4 (116-389)||(4305679-4305951)
chr4 (154-392)||(2825776-2826012)
chr4 (178-456)||(30167355-30167628)
chr4 (189-435)||(35341148-35341391)
chr4 (326-436)||(8705951-8706061)
chr4 (160-277)||(25753171-25753285)
chr4 (173-307)||(38637171-38637301)
chr4 (358-464)||(20464786-20464888)
chr4 (160-245)||(22811157-22811242)
chr4 (173-226)||(40813797-40813850)
chr4 (160-245)||(53823418-53823503)
chr4 (173-245)||(38929839-38929911)
chr4 (175-217)||(39421038-39421080)
chr4 (173-232)||(36962626-36962684)
chr4 (173-231)||(39041285-39041343)
chr4 (173-242)||(46698784-46698854)
chr4 (173-230)||(6599957-6600014)
chr4 (176-245)||(16501746-16501815)
chr4 (173-230)||(21387216-21387273)
chr4 (160-245)||(35800488-35800573)
chr4 (160-245)||(49747526-49747611)
chr4 (173-245)||(28966879-28966951)
chr4 (168-246)||(2061734-2061812)
chr4 (173-207)||(53756768-53756802)
chr4 (181-230)||(2792286-2792335)
chr4 (173-242)||(24740103-24740172)
chr4 (173-205)||(37707392-37707424)
chr4 (185-245)||(41117964-41118024)
[»] chr7 (39 HSPs)
chr7 (119-464)||(3867073-3867414)
chr7 (116-464)||(38306215-38306559)
chr7 (116-464)||(47325666-47326012)
chr7 (115-436)||(5860095-5860416)
chr7 (123-390)||(33435070-33435337)
chr7 (143-464)||(35745602-35745926)
chr7 (143-436)||(37794971-37795263)
chr7 (116-436)||(3419462-3419783)
chr7 (116-384)||(41089607-41089875)
chr7 (153-392)||(34389954-34390192)
chr7 (183-464)||(44353346-44353623)
chr7 (116-464)||(10244136-10244479)
chr7 (143-299)||(6584891-6585046)
chr7 (117-464)||(25160770-25161108)
chr7 (288-436)||(31971941-31972089)
chr7 (119-392)||(8745110-8745384)
chr7 (185-304)||(48161964-48162083)
chr7 (326-436)||(3419203-3419313)
chr7 (173-244)||(9349761-9349832)
chr7 (355-460)||(40726291-40726392)
chr7 (160-230)||(1320793-1320863)
chr7 (176-230)||(24324810-24324864)
chr7 (160-230)||(42533264-42533334)
chr7 (173-230)||(6716748-6716805)
chr7 (173-230)||(13311851-13311908)
chr7 (161-283)||(3478352-3478471)
chr7 (176-245)||(12480901-12480970)
chr7 (173-213)||(38485568-38485608)
chr7 (326-392)||(6585045-6585112)
chr7 (160-230)||(16828948-16829018)
chr7 (160-230)||(16954652-16954722)
chr7 (173-251)||(23983207-23983285)
chr7 (116-198)||(44755581-44755663)
chr7 (160-245)||(46133274-46133360)
chr7 (173-210)||(46262151-46262188)
chr7 (173-207)||(17802851-17802885)
chr7 (173-230)||(11379139-11379196)
chr7 (173-210)||(27993568-27993605)
chr7 (173-210)||(35206725-35206762)
[»] chr1 (33 HSPs)
chr1 (116-436)||(41920407-41920731)
chr1 (117-464)||(24449712-24450056)
chr1 (116-464)||(46692602-46692946)
chr1 (116-464)||(5389205-5389548)
chr1 (153-436)||(5459153-5459435)
chr1 (116-392)||(31585610-31585887)
chr1 (143-400)||(7857635-7857891)
chr1 (123-351)||(24684370-24684598)
chr1 (148-464)||(46814247-46814561)
chr1 (116-347)||(30685800-30686031)
chr1 (148-392)||(24658916-24659158)
chr1 (148-392)||(27031692-27031934)
chr1 (117-240)||(20113523-20113647)
chr1 (290-392)||(6764232-6764334)
chr1 (173-245)||(19598648-19598720)
chr1 (160-221)||(6583237-6583298)
chr1 (180-245)||(27102210-27102275)
chr1 (160-245)||(32864558-32864643)
chr1 (361-436)||(6804739-6804814)
chr1 (160-230)||(17033585-17033655)
chr1 (160-221)||(9313310-9313371)
chr1 (370-464)||(30685706-30685797)
chr1 (173-221)||(38544759-38544807)
chr1 (160-245)||(34774870-34774955)
chr1 (173-230)||(15840924-15840981)
chr1 (173-222)||(22200020-22200069)
chr1 (379-464)||(32882583-32882667)
chr1 (176-236)||(2877652-2877711)
chr1 (173-213)||(4651792-4651832)
chr1 (183-222)||(22239699-22239738)
chr1 (176-245)||(16147570-16147639)
chr1 (177-245)||(10785456-10785524)
chr1 (173-213)||(30655572-30655612)
[»] chr8 (29 HSPs)
chr8 (116-464)||(31207144-31207488)
chr8 (116-436)||(24995201-24995522)
chr8 (116-436)||(9519453-9519774)
chr8 (116-436)||(37986665-37986985)
chr8 (116-408)||(32066130-32066422)
chr8 (116-464)||(34388789-34389132)
chr8 (116-372)||(36630791-36631047)
chr8 (183-464)||(20138448-20138725)
chr8 (143-464)||(15821158-15821478)
chr8 (173-436)||(41893209-41893469)
chr8 (158-392)||(12898126-12898358)
chr8 (143-436)||(16457282-16457559)
chr8 (192-392)||(38577640-38577840)
chr8 (248-464)||(35816026-35816238)
chr8 (116-294)||(10248504-10248680)
chr8 (178-245)||(32945700-32945767)
chr8 (354-436)||(35821432-35821514)
chr8 (116-245)||(17656999-17657128)
chr8 (173-242)||(15906698-15906767)
chr8 (173-245)||(30236125-30236197)
chr8 (262-362)||(22773598-22773699)
chr8 (160-218)||(10552267-10552325)
chr8 (173-245)||(12198066-12198138)
chr8 (173-245)||(12442494-12442566)
chr8 (173-224)||(33967338-33967389)
chr8 (362-408)||(22773815-22773861)
chr8 (173-210)||(40531244-40531281)
chr8 (374-462)||(17656518-17656606)
chr8 (395-464)||(36631057-36631122)
[»] chr5 (22 HSPs)
chr5 (154-464)||(29087474-29087777)
chr5 (153-436)||(34378090-34378371)
chr5 (116-436)||(18593197-18593517)
chr5 (116-392)||(698315-698591)
chr5 (286-464)||(7161796-7161973)
chr5 (206-293)||(7162267-7162353)
chr5 (160-245)||(13954231-13954316)
chr5 (173-245)||(7195236-7195308)
chr5 (250-464)||(18313426-18313636)
chr5 (160-221)||(7392052-7392113)
chr5 (168-244)||(22675322-22675398)
chr5 (161-298)||(14302377-14302511)
chr5 (176-245)||(21402834-21402903)
chr5 (148-221)||(33258903-33258976)
chr5 (173-245)||(27713081-27713153)
chr5 (173-221)||(39184208-39184256)
chr5 (161-245)||(25992007-25992091)
chr5 (161-245)||(26045961-26046045)
chr5 (432-462)||(7195083-7195113)
chr5 (191-245)||(8297498-8297552)
chr5 (176-209)||(12046270-12046303)
chr5 (173-242)||(23426356-23426425)
[»] chr6 (17 HSPs)
chr6 (116-436)||(3117447-3117767)
chr6 (316-464)||(14663231-14663379)
chr6 (310-436)||(10541980-10542106)
chr6 (119-239)||(16510304-16510425)
chr6 (160-245)||(32935336-32935421)
chr6 (175-294)||(20701754-20701870)
chr6 (173-294)||(26215970-26216088)
chr6 (146-219)||(26534742-26534815)
chr6 (162-221)||(9224042-9224101)
chr6 (176-227)||(34105428-34105479)
chr6 (173-230)||(34092807-34092864)
chr6 (116-199)||(3880626-3880710)
chr6 (160-244)||(21266112-21266196)
chr6 (177-244)||(13423482-13423549)
chr6 (431-464)||(15120383-15120416)
chr6 (148-219)||(12794101-12794173)
chr6 (173-213)||(34090375-34090415)
[»] scaffold0343 (1 HSPs)
scaffold0343 (203-436)||(5747-5980)
[»] scaffold0068 (1 HSPs)
scaffold0068 (117-464)||(35559-35897)
[»] scaffold0200 (1 HSPs)
scaffold0200 (160-245)||(19382-19467)
[»] scaffold0119 (1 HSPs)
scaffold0119 (168-245)||(42135-42212)
[»] scaffold0063 (1 HSPs)
scaffold0063 (160-245)||(58126-58211)
[»] scaffold0050 (1 HSPs)
scaffold0050 (160-227)||(36706-36773)
[»] scaffold1613 (1 HSPs)
scaffold1613 (173-221)||(1038-1086)
[»] scaffold0620 (2 HSPs)
scaffold0620 (173-227)||(3842-3896)
scaffold0620 (173-230)||(8141-8198)


Alignment Details
Target: chr2 (Bit Score: 400; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 1 - 464
Target Start/End: Original strand, 387013 - 387475
Alignment:
Q  1 atggaaactttctaatgatggagtcaattcaatttagcttctgcttatgaggcaattacttaaaagatatgaggtccatctctttaagaaacttgtcctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  387013 atggaaactttctaatgatggagtcaattcaatttagcttctgcttatgaggcaattacttaaaagatatgaggtccatctctttaagaaacttgtcctt 387112  T
Q  101 gctctacaaatgctaatttggtttttctctggtacaccgggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattca 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||| ||||||||||| ||||||||||||||      
T  387113 gctctacaaatgctaatttggtttttctctggtacaccggggcgaggggtgccctgctaatttggtactaaagtctggtgggctgatcacttttgatttg 387212  T
Q  201 agatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgtt 300  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  387213 agatcgggagtcaattctttgactcaagttggtttttgagcttttgtttttgtgctcttttggtggatcggaggtcacgaggttttggaagctgcatgtt 387312  T
Q  301 cattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatggg 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||    
T  387313 cattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgggggtgaatagtgacgatggg 387412  T
Q  401 cggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  387413 cggtggtgaattttgtgtttacaatgcttg-tttttgtgaaggagtctgttttaggtggtgatg 387475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 116 - 436
Target Start/End: Complemental strand, 39338992 - 39338673
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||| ||||  ||||||  |||| |||| ||||||||||||||||||  |||||||||||||||| |||||||||| |||||||||||||     
T  39338992 atttggtttttctttggtgtaccgggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcgcttttgattcgagatcgggagtcag 39338893  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    ||||||||||||||||||||||||||||||   | ||||||||||| |||||||||||||||||||||||| ||  ||||| ||| || ||| || ||||    
T  39338892 ttctttgactcaagttggtttttgggcttt--gtgttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggt 39338795  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    |||||||||   ||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||  |||||||| ||||| ||      
T  39338794 gctcttcgaattgtgactcagcttgggtgttgaggtctgggagttttattttgagggtgttctttgtgggtgagtagtgacgatgggcgatggtggatac 39338695  T
Q  414 tgtgtttacagtgcttgtttttt 436  Q
    | |||||||||||||||||||||    
T  39338694 t-tgtttacagtgcttgtttttt 39338673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 116 - 437
Target Start/End: Original strand, 10524051 - 10524375
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  || |||  ||||||||| ||||| |||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||    
T  10524051 atttggtttttctctggtctactgggggcgagaggtgccctgccaatttggtgctatagtctggtgggccgatcacttttgattcgagatcgggagtcaa 10524150  T
Q  215 t----tctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtc 309  Q
    |    |||||||||||||||||||||||||||||   | ||||||||||| ||||  ||||||||||||||||||  || ||||||||| || ||| ||     
T  10524151 tatattctttgactcaagttggtttttgggctttg--tgttgtgctctttcggtgt-tcggaggtcgcgaggtttgtgatagctgcatgatccttcggtt 10524247  T
Q  310 aggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtga 409  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||     
T  10524248 aggtgctcttcgatatgtggctcagcttgggtgttggggtttgggagttttatttggagggtgttctttgtgggtgagtagtgacgatgggcggtggtgg 10524347  T
Q  410 attttgtgtttacagtgcttgttttttg 437  Q
    ||   |||||||| ||||||||||||||    
T  10524348 ataccgtgtttacggtgcttgttttttg 10524375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 148 - 433
Target Start/End: Original strand, 7874278 - 7874561
Alignment:
Q  148 ggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgt 247  Q
    |||| |||||| ||||||| |||| |||||||||| |||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||     
T  7874278 ggtgccctgctgatttggttctaaagtctggtgggtcgatcacttttgattcgagatcgggagtcagctctttgactcaagttggtttttgggcttttg- 7874376  T
Q  248 ttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggg 347  Q
    |||||||||| || |||||||||||||||| |||||| ||||| || | ||||||||  || ||| ||| ||||| | ||||||||||||||||||||      
T  7874377 ttttgtgctcattcggtggatcggaggtcgagaggttgtggaaactacttgttcatttggttaggagcttttcga-atgtggctcagcttgggtgttgaa 7874475  T
Q  348 gtctaggagttttattttgaggg-tgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttt 433  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||  |||||| ||| ||| ||  ||||||||||||| ||||||    
T  7874476 gtcttggagttttattttgagggatgttcttt-ggggtgagtagtgacgatgggtggttgtggatactgtgtttacagtgtttgttt 7874561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 143 - 433
Target Start/End: Complemental strand, 14106623 - 14106332
Alignment:
Q  143 cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactca-agttggtttttgggc 241  Q
    |||| |||| |||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||  |||||   |||   ||||||||||||     
T  14106623 cgaggggtgccctgctgatttggtcctaaagtctggtgggccgatcacttttgattcaagatcgggagtcagctctttagatcagttttggtttttgggt 14106524  T
Q  242 ttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggt 341  Q
    ||||||||||||||||||| |||||||| ||||||| |||||| |||||| || ||| |||||| || | | ||| | ||| | ||||||||||||||||    
T  14106523 ttttgtttttgtgctctttcggtggatcagaggtcgagaggttgtggaagttgtatgatcattcggttaagagctttacga-atgtggctcagcttgggt 14106425  T
Q  342 gttggggtctaggagttttattttga-gggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttt 433  Q
    ||||  ||||  |||||||||||||| |||||||||||||||||||||||||  |||| | ||| ||| ||  |||||||||| || ||||||    
T  14106424 gttgaagtctgagagttttattttgaggggtgttctttgggggtgagtagtgacgatgagtggttgtggatactgtgtttacaatgtttgttt 14106332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 160 - 392
Target Start/End: Original strand, 14405197 - 14405429
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctctt 259  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||||| ||||||||||||    
T  14405197 atttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggctcaagttggtttttgggcttttg-ttttgtgctctt 14405295  T
Q  260 ttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttt 359  Q
    | |||||||| || |||| | |||| ||||| ||||| |||||||  || ||| |||  |||  | |||||||  |||||||||||  |||| |||||||    
T  14405296 tcggtggatcagaagtcgagtggttgtggaaactgcacgttcatttggttaggagcttgtcg-catgtggctcgacttgggtgttgaagtctgggagttt 14405394  T
Q  360 tattttgaggg-tgttc-tttgggggtgagtagtg 392  Q
    ||||||||||| ||||| |||||||||||||||||    
T  14405395 tattttgagggatgttcttttgggggtgagtagtg 14405429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 168 - 464
Target Start/End: Original strand, 5254263 - 5254552
Alignment:
Q  168 ctaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtgga 267  Q
    |||| |||| ||||||||||||||||| |||  ||||||||||||   ||||||  ||||||||||||| ||||||||||||| ||||| ||| ||||||    
T  5254263 ctaaagtctagtgggccgatcacttttaatttgagatcgggagtctgctctttggttcaagttggttttcgggcttttgtttt-gtgctttttcggtgga 5254361  T
Q  268 tcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttga 367  Q
    |||||||||| |||||| |||||||||||||||||||| ||  || ||| ||||| | ||||||||| ||||||||||  ||||  |||||   ||||||    
T  5254362 tcggaggtcgagaggttgtggaagctgcatgttcattcggtttggagcttttcga-atgtggctcagtttgggtgttgaagtctgagagtt---ttttga 5254457  T
Q  368 -gggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
     |||||||||||  ||||||||||||  |||||| ||| ||| ||  ||||||||||||| ||| ||| ||| |||| ||| || |||||||||||||    
T  5254458 ggggtgttcttt--gggtgagtagtgacgatgggtggttgtggatactgtgtttacagtgtttg-tttctgttaaggtgtccgtcttaggtggtgatg 5254552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 198 - 436
Target Start/End: Complemental strand, 17116923 - 17116686
Alignment:
Q  198 tcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgca 296  Q
    ||||||| |||||||| || ||||||||| |||||||||| ||||||   ||||||||| ||| | | ||| ||||||||||||||||  || | || |     
T  17116923 tcaagattgggagtcagtt-tttgactcatgttggtttttaggctttg--ttttgtgctttttcgatagattggaggtcgcgaggtttgtgatatctact 17116827  T
Q  297 tgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagtttt-attttgagggtgttctttgggggtgagtagtggtg 395  Q
    || ||  || || ||||||||||||  | ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||| ||  |    
T  17116826 tgatccatcggttaggtgctcttcgtaatgtggctcagcttgggtgttggggtctgagagtttttattttgagggtgttctttgtgggtgagtaatgacg 17116727  T
Q  396 atgggcggtggtgaattttgtgtttacagtgcttgtttttt 436  Q
    ||||||||||||| ||   ||||||||||||||| ||||||    
T  17116726 atgggcggtggtggataccgtgtttacagtgcttttttttt 17116686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 433
Target Start/End: Original strand, 7460839 - 7460947
Alignment:
Q  326 gtggctcagcttgggtgttggggtctaggagttttattttga-gggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacag 424  Q
    ||||||||||||||||||||  |||| ||||||||||||||| ||||||||||||||| |||||||||  |||| | ||| ||| || ||||||||||||    
T  7460839 gtggctcagcttgggtgttgaagtctgggagttttattttgaggggtgttctttggggttgagtagtgacgatgtgtggttgtggatattgtgtttacag 7460938  T
Q  425 tgcttgttt 433  Q
    || ||||||    
T  7460939 tgtttgttt 7460947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 4471935 - 4472035
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcgga 272  Q
    |||||||||||||||| | |||||||| ||||||||||||| |||||||| ||||||| ||||||||||||   | || ||| |||||||||||| ||||    
T  4471935 gtctggtgggccgatcgcctttgattcgagatcgggagtcagttctttgattcaagtttgtttttgggctt---tattggtgttcttttggtggaccgga 4472031  T
Q  273 ggtc 276  Q
    ||||    
T  4472032 ggtc 4472035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 10173659 - 10173539
Alignment:
Q  161 tttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttt 260  Q
    |||||| |||| |||| |||||||||||||||||||||| ||||||| ||| | || |||| |||||||| | |||||||||||||  || ||| |||||    
T  10173659 tttggtcctaaagtctagtgggccgatcacttttgattcgagatcggaagtaagttatttggctcaagtttggttttgggcttttg--ttggtgttcttt 10173562  T
Q  261 tggtggatcggaggtcgcgaggt 283  Q
     |||| ||||||||||| |||||    
T  10173561 cggtgaatcggaggtcgagaggt 10173539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 1269490 - 1269567
Alignment:
Q  168 ctaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||| | ||||||| ||||    
T  1269490 ctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttgggatttt 1269567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 22885202 - 22885111
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtgga 267  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||| | |||||||   ||||||| ||| ||||| ||||||    
T  22885202 gtctggtgggccgatcacttttgattcgagatcgggagtcagttctttggttcaagtttggttttggg---ttgttttggtgttctttcggtgga 22885111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 16959989 - 16960064
Alignment:
Q  168 ctaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctt 243  Q
    |||| |||||||||||||||| |||||||||| |||||| |||||| ||||||| |||||||| | ||||||||||    
T  16959989 ctaaagtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttggctcaagtttggttttgggctt 16960064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 307
Target Start/End: Complemental strand, 37770723 - 37770580
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctctt 259  Q
    ||||||| |||| || ||||||||||||||||||||||||  |||| ||||||||||||||   |||| || | |||||||||||| |  ||    ||||    
T  37770723 atttggtcctaaggtttggtgggccgatcacttttgattctggatcaggagtcaattctttagatcaattttggttttgggcttttatggtt----tctt 37770628  T
Q  260 ttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcag 307  Q
    | |||| ||||||||||| ||||| |||||||||| ||| || |||||    
T  37770627 tcggtgaatcggaggtcgagaggtgttggaagctgaatgatctttcag 37770580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 2062900 - 2062973
Alignment:
Q  172 cgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||||||||||||  |||||||||| |||||||||||||  |||||| |||||||| | ||||||||||||    
T  2062900 cgtctggtgggccgattgcttttgattcgagatcgggagtcagctctttggctcaagtttggttttgggctttt 2062973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 13337286 - 13337358
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||| ||||||||||||||||||||| | ||||| ||||| |||||||||||||||| | |||||| |||||    
T  13337286 gtctgatgggccgatcacttttgattcgaaatcggaagtcagttctttgactcaagttaggttttggactttt 13337358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 15126479 - 15126407
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||||||||||||| ||||||||| ||||||||||||  ||||||| |||| ||| | ||||||||||||    
T  15126479 gtctggtgggccgatcatttttgattcgagatcgggagtcggttctttggctcatgtttggttttgggctttt 15126407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 182 - 464
Target Start/End: Complemental strand, 16952443 - 16952163
Alignment:
Q  182 gccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgag 281  Q
    |||||||  ||||||||| |||||||||| || ||||||| |||||||| | |||||| | |||  ||| ||| ||||| |||||||||||||| | |||    
T  16952443 gccgatcttttttgattcgagatcgggagccagttctttggctcaagtttggttttggacattt--tttggtgttctttcggtggatcggaggttgagag 16952346  T
Q  282 gttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttga-gggtgttctttgg 380  Q
    ||  ||||||||  | | || ||| |  ||| ||| ||||  | |||| ||| ||| ||||||| || || ||||||| |||| || |||||||||||||    
T  16952345 gtggtggaagctaaacgatctttcggataggagcttttcg-gatgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttctttgg 16952247  T
Q  381 gggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||||||||||||  |||| | |||| ||||| |  | ||| ||||  ||  |||| ||||||| |||||||||| |||||||||    
T  16952246 gggtgagtagtgacgatgagtggtgatgaatatcttttttgcagtagtttgttttcgtgaaggcgtctgttttaagtggtgatg 16952163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 182 - 464
Target Start/End: Complemental strand, 17023108 - 17022828
Alignment:
Q  182 gccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgag 281  Q
    |||||||  ||||||||| |||||||||| || ||||||| |||||||| | |||||| | |||  ||| ||| ||||| |||||||||||||| | |||    
T  17023108 gccgatcttttttgattcgagatcgggagccagttctttggctcaagtttggttttggacattt--tttggtgttctttcggtggatcggaggttgagag 17023011  T
Q  282 gttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttga-gggtgttctttgg 380  Q
    ||  ||||||||  | | || ||| |  ||| ||| ||||  | |||| ||| ||| ||||||| || || ||||||| |||| || |||||||||||||    
T  17023010 gtggtggaagctaaacgatctttcggataggagcttttcg-gatgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttctttgg 17022912  T
Q  381 gggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||||||||||||  |||| | |||| ||||| |  | ||| ||||  ||  |||| ||||||| |||||||||| |||||||||    
T  17022911 gggtgagtagtgacgatgagtggtgatgaatatcttttttgcagtagtttgttttcgtgaaggcgtctgttttaagtggtgatg 17022828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 182 - 464
Target Start/End: Complemental strand, 17060414 - 17060134
Alignment:
Q  182 gccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgag 281  Q
    |||||||  ||||||||| |||||||||| || ||||||| |||||||| | |||||| | |||  ||| ||| ||||| |||||||||||||| | |||    
T  17060414 gccgatcttttttgattcgagatcgggagccagttctttggctcaagtttggttttggacattt--tttggtgttctttcggtggatcggaggttgagag 17060317  T
Q  282 gttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttga-gggtgttctttgg 380  Q
    ||  ||||||||  | | || ||| |  ||| ||| ||||  | |||| ||| ||| ||||||| || || ||||||| |||| || |||||||||||||    
T  17060316 gtggtggaagctaaacgatctttcggataggagcttttcg-gatgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttctttgg 17060218  T
Q  381 gggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||||||||||||  |||| | |||| ||||| |  | ||| ||||  ||  |||| ||||||| |||||||||| |||||||||    
T  17060217 gggtgagtagtgacgatgagtggtgatgaatatcttttttgcagtagtttgttttcgtgaaggcgtctgttttaagtggtgatg 17060134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 36276240 - 36276178
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttt 236  Q
    ||||||||||| | || |||||||||| |||||||||||||| ||||||||||||||| |||||    
T  36276240 gtctggtgggctgttcgcttttgattcgagatcgggagtcaa-tctttgactcaagtttgtttt 36276178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 7695985 - 7696047
Alignment:
Q  183 ccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||||||||||||| | | ||||||||| ||||||| |||||||| | ||||||||||||    
T  7695985 ccgatcacttttgattcgataccgggagtcagttctttggctcaagttaggttttgggctttt 7696047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 4162089 - 4162052
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggag 210  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  4162089 gtctggtgggccgatcacttttgattcgagatcgggag 4162052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 23650384 - 23650444
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattcttt 220  Q
    ||||||| |||  ||||||||||| |||| |||||||||| ||||||||||||| ||||||    
T  23650384 atttggttctagagtctggtgggctgatcgcttttgattcgagatcgggagtcatttcttt 23650444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 27739987 - 27740027
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtca 213  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  27739987 gtctggtgggccgatcgcttttgattcaagatcgagagtca 27740027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 33788701 - 33788653
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    |||||||||||||||| |||||||||| |||| |||||||| |||||||    
T  33788701 gtctggtgggccgatcgcttttgattcgagattgggagtcagttctttg 33788653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 18681080 - 18681151
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgt 247  Q
    ||||||||||||  | |||||||| ||||||||||||| |||| ||  ||||||| | ||||||||||||||    
T  18681080 tggtgggccgattgcatttgattcgagatcgggagtcagttctctggttcaagtttggttttgggcttttgt 18681151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 17079190 - 17079281
Alignment:
Q  182 gccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggt 275  Q
    |||||||  ||||||||| |||||||||| || ||||||| |||||||| | |||||| | |||  ||| ||| ||||| ||||||||||||||    
T  17079190 gccgatcttttttgattcgagatcgggagccagttctttggctcaagtttggttttggacattt--tttggtgttctttcggtggatcggaggt 17079281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 34230219 - 34230285
Alignment:
Q  179 tgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||||||| |||| |||| ||||| ||||||| |||||||  ||||||| | ||||||||||||    
T  34230219 tgggccgatcattttttattcgagatcaggagtcagttctttggatcaagtttgattttgggctttt 34230285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 9e-99; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 158 - 464
Target Start/End: Original strand, 43012372 - 43012676
Alignment:
Q  158 taatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctc 257  Q
    ||||||||| |||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  43012372 taatttggttctaaagtctggtggcccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgagcttttgtttt-gtgctc 43012470  T
Q  258 ttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagt 357  Q
    ||| |||| ||| |||||||||||||| |||||| |||||| || ||| |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  43012471 tttcggtgaatcagaggtcgcgaggttgtggaagttgcatgatcgttcggtcaggtgctcttcgaaatgtggctcagcttgggtgttggggtctaggagt 43012570  T
Q  358 tttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggt 457  Q
    |||| |||||||||||||||||| |||||||||||| ||||| ||| |||| ||   ||||||||| |||||| |||||||||||||||||||||||| |    
T  43012571 tttaatttgagggtgttctttggaggtgagtagtggcgatggacgggggtggataccgtgtttacaatgcttg-tttttgtgaaggagtctgttttagat 43012669  T
Q  458 ggtgatg 464  Q
    |||||||    
T  43012670 ggtgatg 43012676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 148 - 460
Target Start/End: Original strand, 19176489 - 19176801
Alignment:
Q  148 ggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgt 247  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||     
T  19176489 ggtgccctgctaatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggcttttg- 19176587  T
Q  248 ttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttc--attcagtcaggtgctcttcgataggtggctcagcttgggtgttg 345  Q
     |||||||||||||||||||||||||||||| ||||| ||||||||||||| ||   ||| |||||||||||||||  | |||||||||||||||||| |    
T  19176588 atttgtgctcttttggtggatcggaggtcgcaaggttgtggaagctgcatgatccttttcggtcaggtgctcttcgtaatgtggctcagcttgggtgtcg 19176687  T
Q  346 gggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggag 445  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||  |||||  ||||||| ||  ||||||||| ||||||||||||| |   ||||    
T  19176688 gggtctgggtgttttattttgagggtgttctttaggggtgagtagtgacgatggatggtggtggatactgtgtttactgtgcttgtttttt-ttttggag 19176786  T
Q  446 tctgttttaggtggt 460  Q
    |||||||||||||||    
T  19176787 tctgttttaggtggt 19176801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 116 - 434
Target Start/End: Original strand, 20611737 - 20612054
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  ||||||  |||| |||| ||||||||||| ||||||  || || ||||||||||| ||||||||| |||||||||||||     
T  20611737 atttggtttttctctggtgtaccgggggcgaggggtgccctgctaatttcgtactatagtttgttgggccgatcatttttgattcgagatcgggagtcag 20611836  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggt 313  Q
    |||||||||| |||||||||||||||||||   ||  ||||||||| ||||||||||||||||||||||||  || ||||| ||| || ||| || ||||    
T  20611837 ttctttgacttaagttggtttttgggctttgcgtt--gtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggt 20611934  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    ||||||||| | ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||  |||||||| ||||| ||      
T  20611935 gctcttcgaaatgtgactcagcttgggtgttggg-tctaggagttttattctgagggtgttctttgtgggtgagtagtgacgatgggcgatggtggatac 20612033  T
Q  414 tgtgtttacagtgcttgtttt 434  Q
    |||||||||||||||||||||    
T  20612034 tgtgtttacagtgcttgtttt 20612054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 117 - 436
Target Start/End: Complemental strand, 2392632 - 2392313
Alignment:
Q  117 tttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaat 215  Q
    ||||||||| |||||||  ||||||  |||| |||| ||||||||||||||||||  | ||||||| ||||||||||||||||| |||| || ||||| |    
T  2392632 tttggttttactctggtgtaccgggggcgaggggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagattggaagtcagt 2392533  T
Q  216 tctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggtg 314  Q
    |||||| || |||||||||||||||||||   | ||||||||||| |||||||||||||||||||||||| ||  ||||||||| || ||| || |||      
T  2392532 tctttgtcttaagttggtttttgggctttg--tgttgtgctctttcggtggatcggaggtcgcgaggtttgtgctagctgcatgatccttcggttaggat 2392435  T
Q  315 ctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaatttt 414  Q
    |||||| | | |||||||||||||||||||||||||||||||||||||||||  |||||| |||| ||||||||||||  |||||||||||||| ||       
T  2392434 ctcttcaaaatgtggctcagcttgggtgttggggtctaggagttttattttgtaggtgttatttgtgggtgagtagtgacgatgggcggtggtggatacc 2392335  T
Q  415 gtgtttacagtgcttgtttttt 436  Q
    ||||||||||||||| ||||||    
T  2392334 gtgtttacagtgcttttttttt 2392313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 148 - 448
Target Start/End: Complemental strand, 9584147 - 9583851
Alignment:
Q  148 ggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgt 247  Q
    |||| |||||||||||| |||||| |||||||||  |||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||     
T  9584147 ggtgccctgctaatttgatactaaagtctggtggatcgatcacttttgattcgagatcgggagtcagttctttgtctcaagatggtttttgggcttttg- 9584049  T
Q  248 ttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggg 347  Q
    ||||||| ||||| |||||||||||||| |||||||| | ||||  ||| | || ||| |||||| |||||||||   ||||||| |||||||| |||||    
T  9584048 ttttgtgatctttcggtggatcggaggttgcgaggttgt-gaagtcgcacgatccttcggtcaggcgctcttcgaattgtggctctgcttgggttttggg 9583950  T
Q  348 gtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtc 447  Q
    |||| ||||||||||||||||| |||||||| | |||||||||||  ||| |||||||||| || | |||||||| ||||||||||||| ||||||||||    
T  9583949 gtctgggagttttattttgaggatgttcttt-gcggtgagtagtgacgataggcggtggtggatatcgtgtttacggtgcttgtttttt-tgaaggagtc 9583852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 143 - 433
Target Start/End: Complemental strand, 23328449 - 23328160
Alignment:
Q  143 cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    |||| |||| |||| | ||||||| |||| || |||||| ||||||||||||||||| ||||||||||| |  | |||| |||||||||||||||| |||    
T  23328449 cgaggggtgccctgttgatttggttctaaagtttggtggaccgatcacttttgattcgagatcgggagttagctttttggctcaagttggtttttgagct 23328350  T
Q  243 tttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtg 342  Q
    |||| ||||||||||||| |||||||||||||||| |||||| |||||||| | ||||||||| || ||| ||| ||||| | |||||||||||||||||    
T  23328349 tttg-ttttgtgctctttcggtggatcggaggtcgagaggttgtggaagctccttgttcattcggttaggagcttttcga-atgtggctcagcttgggtg 23328252  T
Q  343 ttggggtctaggagttttattttgag-ggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttt 433  Q
    |||  |||| |||||||||||||||| ||||||||||||||||||||||||  |||||| ||| ||| || ||||| |||||||| ||||||    
T  23328251 ttgaagtctgggagttttattttgagtggtgttctttgggggtgagtagtgacgatgggtggttgtggatattgtgcttacagtgtttgttt 23328160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 117 - 464
Target Start/End: Complemental strand, 34475880 - 34475540
Alignment:
Q  117 tttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaat 215  Q
    |||| ||||||||||||  ||||||  |||| |||| |||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||||||||     
T  34475880 tttgatttttctctggtgtaccgggggcgaggggtgccctgctaatttgtttctatagtctggtgggccgatcacttttgattcgagatcgggagtcaaa 34475781  T
Q  216 tctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggtg 314  Q
    |||| || | |||||| ||||||||||||   | ||||||||||| ||||||| |||||||||||||||| ||  ||||| ||| || ||| || |||||    
T  34475780 tcttggaattaagttgatttttgggcttt--gtgttgtgctctttcggtggattggaggtcgcgaggtttgtgatagctgtatgatccttcggttaggtg 34475683  T
Q  315 ctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaatttt 414  Q
    |||||||| | ||| |||||||| ||||||||||| |  ||||||  |||| ||||||||||||| ||||||||||||  |||||||||||||| ||       
T  34475682 ctcttcgaaatgtgactcagcttaggtgttggggtatgagagttt--ttttaagggtgttctttgtgggtgagtagtgacgatgggcggtggtggatacc 34475585  T
Q  415 gtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||||||||| ||||||||||||     |||||||||||||||||||||||    
T  34475584 gtgtttacattgcttgtttttt-----ggagtctgttttaggtggtgatg 34475540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 192 - 464
Target Start/End: Original strand, 47235729 - 47235997
Alignment:
Q  192 tttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-a 290  Q
    |||||||| |||||| |||||  |||||||||| ||||||||||||||||||| || ||| |||||||| |||||||| |||||||||||||||  || |    
T  47235729 tttgattcgagatcgagagtcggttctttgacttaagttggtttttgggcttt-gtgttt-tgctctttcggtggatcagaggtcgcgaggtttgtgata 47235826  T
Q  291 gctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtag 390  Q
    |||||||| || ||| || ||||||||||||| | |||| |||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  47235827 gctgcatgatccttcggttaggtgctcttcgaaatgtggttcagcttgggtgttggggtctgcgagttttattttgagggtgttctttgtgggtgagtag 47235926  T
Q  391 tggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||  ||||| |||||||| ||   |||||||||||||||||||||| | |   |||||||||||||||||||||    
T  47235927 tgacgatggacggtggtggataccgtgtttacagtgcttgttttttttta---agtctgttttaggtggtgatg 47235997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 148 - 464
Target Start/End: Complemental strand, 40023666 - 40023351
Alignment:
Q  148 ggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgt 247  Q
    |||| |||||| |||| ||  ||| ||||||||| ||||||||||||||||| |||||||||||| |||||||| || |||||||||||||||||||||     
T  40023666 ggtgccctgctgattttgttttaaagtctggtggaccgatcacttttgattcgagatcgggagtcgattctttggcttaagttggtttttgggcttttg- 40023568  T
Q  248 ttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggg 347  Q
    ||||||||||||| |||||||| |||| || |||||| |||||||||||||||||||| || ||| ||| ||||| | ||||||||||| ||||||||      
T  40023567 ttttgtgctctttcggtggatcagaggacgggaggttgtggaagctgcatgttcattcggttaggagcttttcga-atgtggctcagctagggtgttgta 40023469  T
Q  348 gtctaggagttttattttga-gggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagt 446  Q
    |||| ||||||||||||||| ||| ||||||| ||| |||||||||  |||||  ||| ||| ||   |||||||||||| ||  ||| ||| |||| ||    
T  40023468 gtctgggagttttattttgaggggcgttcttttgggatgagtagtgacgatggatggttgtggataccgtgtttacagtgttttgtttctgttaaggtgt 40023369  T
Q  447 ctgttttaggtggtgatg 464  Q
    |||| |||||||||||||    
T  40023368 ctgtcttaggtggtgatg 40023351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 143 - 464
Target Start/End: Original strand, 45163835 - 45164153
Alignment:
Q  143 cgagaggtgtcctgctaatttggtactaacgtctggtg--ggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttggg 240  Q
    |||| |||| ||||||||||||||||||  |||| |||  ||||||||||||||||||| ||||| | ||||| || |||| || |||||||||||||||    
T  45163835 cgaggggtgccctgctaatttggtactatagtcttgtgtgggccgatcacttttgattcgagatcagaagtcagttttttgtcttaagttggtttttggg 45163934  T
Q  241 cttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgg 339  Q
    ||||   | ||||||||||| ||||||||||||||| ||| ||||  || ||||||||| || ||| || ||||||||||||| | |||||| |||||||    
T  45163935 ctttg--tgttgtgctctttcggtggatcggaggtcacgaagtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtggcttagcttgg 45164032  T
Q  340 gtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtg 439  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||| |||||  ||||||||||| |||||   ||||||||| ||||||||| ||       
T  45164033 gtgttggggtctaggagttttattttgagggtgttatttgtaggtgattagtgacgatgggcggtgatgaataccgtgtttacaatgcttgtttctt--- 45164129  T
Q  440 aaggagtctgttttaggtggtgatg 464  Q
      ||||||| |||||||||||||||    
T  45164130 -tggagtctattttaggtggtgatg 45164153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 173 - 408
Target Start/End: Original strand, 17550969 - 17551198
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcgga 272  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||   | ||||||||||| | || ||||||    
T  17550969 gtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggcttt--gtgttgtgctctttcgatgcatcgga 17551066  T
Q  273 ggtcgcgaggttt-tggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggt 371  Q
    ||||||||||||| ||  ||||||||| |      || ||||||||||||| | ||||||||| ||||||||||||||||  ||||||||||||||||||    
T  17551067 ggtcgcgaggtttgtgatagctgcatgat-----ggttaggtgctcttcgaaatgtggctcagtttgggtgttggggtctgagagttttattttgagggt 17551161  T
Q  372 gttctttgggggtgagtagtggtgatgggcggtggtg 408  Q
    ||||||||  |||||||||||  ||||||||||||||    
T  17551162 gttctttgtcggtgagtagtgacgatgggcggtggtg 17551198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 143 - 464
Target Start/End: Original strand, 45398778 - 45399098
Alignment:
Q  143 cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    |||| |||| |||||| ||||||   ||| ||||||||| ||||||||||||||||| |||||| ||||||  ||||||| | |||||||||||||||||    
T  45398778 cgaggggtgccctgctgatttggatttaaagtctggtggaccgatcacttttgattcgagatcgagagtcagctctttgatttaagttggtttttgggct 45398877  T
Q  243 tttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtg 342  Q
    |||| |||| |||||||| | |||||||||||||| |||||| |||||||||||||||||||| || | | ||| ||||| | ||||| || ||| ||||    
T  45398878 tttg-ttttatgctctttcgatggatcggaggtcgagaggttgtggaagctgcatgttcattcggttatgagcttttcga-atgtggcgcaacttaggtg 45398975  T
Q  343 ttggggtctaggagttttattttg-agggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaa 441  Q
    |||  || | |||||| |||||||  |||||||| ||||||||||||||||  |||||  | | ||| || |||||||||||||| ||  ||| ||| ||    
T  45398976 ttgaagtttgggagttctattttgtggggtgttcgttgggggtgagtagtgacgatggatgattgtggatattgtgtttacagtgttttgtttctgttaa 45399075  T
Q  442 ggagtctgttttaggtggtgatg 464  Q
    || ||| || |||||||||||||    
T  45399076 ggtgtccgtcttaggtggtgatg 45399098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 208 - 464
Target Start/End: Original strand, 53247947 - 53248199
Alignment:
Q  208 gagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattca 306  Q
    ||||||||||||||| |||||||||||||| |  |||||| || ||||||||| ||||||| ||||||||||||||||  || || || ||| || |||     
T  53247947 gagtcaattctttgattcaagttggtttttaga-ttttgtgtt-gtgctctttcggtggattggaggtcgcgaggtttgtgatagttgtatgatccttcg 53248044  T
Q  307 gtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagtttt-attttgagggtgttctttgggggtgagtagtggtgatgggcggtg 405  Q
    || | ||||||||||| | ||||||||| ||||||||||||||||  ||||||| |||||||| |||||||||| ||||||||||||  |||||||||||    
T  53248045 gttatgtgctcttcgaaatgtggctcagtttgggtgttggggtctgagagtttttattttgagagtgttctttgtgggtgagtagtgacgatgggcggtg 53248144  T
Q  406 gtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    |||  |   ||||||||||||||||||||||     |||||||||||||||||||||||    
T  53248145 gtggttaccgtgtttacagtgcttgttttttt----ggagtctgttttaggtggtgatg 53248199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 117 - 436
Target Start/End: Complemental strand, 2394379 - 2394077
Alignment:
Q  117 tttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaat 215  Q
    ||||||||| |||||||  ||||||  |||| |||| ||||||||||||||||||  | ||||||| ||||||||||||||||| |||| || ||||| |    
T  2394379 tttggttttactctggtgtaccgggggcgaggggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagattggaagtcagt 2394280  T
Q  216 tctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggtg 314  Q
    |||||| || |||||||||||||||                   | |||||||||||||||||||||||| ||  ||||||||| || ||| || |||      
T  2394279 tctttgtcttaagttggtttttggg-------------------tcggtggatcggaggtcgcgaggtttgtgctagctgcatgatccttcggttaggat 2394199  T
Q  315 ctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaatttt 414  Q
    |||||| | | |||||||||||||||||||||||||||||||||||||||||  |||||| |||| ||||||||||||  |||||||||||||| ||       
T  2394198 ctcttcaaaatgtggctcagcttgggtgttggggtctaggagttttattttgtaggtgttatttgtgggtgagtagtgacgatgggcggtggtggatacc 2394099  T
Q  415 gtgtttacagtgcttgtttttt 436  Q
    ||||||||||||||| ||||||    
T  2394098 gtgtttacagtgcttttttttt 2394077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 157 - 392
Target Start/End: Original strand, 31482880 - 31483113
Alignment:
Q  157 ctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgct 256  Q
    |||||||||| |||  |||||| |||| ||||||||||||||| ||||||||| |||| ||||  | | |||||| ||||||||||||   | |||||||    
T  31482880 ctaatttggttctatagtctggcgggcggatcacttttgattcgagatcgggaatcaaatcttaaaattaagttgatttttgggcttt--gtgttgtgct 31482977  T
Q  257 cttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctagga 355  Q
    |||| ||||||| |||||||||||||||| ||  ||||||||| || ||| || ||||||||||||| | |||||||||||| ||||||||||| |  ||    
T  31482978 ctttcggtggattggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtggctcagcttaggtgttggggtttgaga 31483077  T
Q  356 gttttattttgagggtgttctttgggggtgagtagtg 392  Q
    ||||| |||| ||||||||||||| |||| |||||||    
T  31483078 gtttt-ttttaagggtgttctttgtgggttagtagtg 31483113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 436
Target Start/End: Complemental strand, 30352356 - 30352248
Alignment:
Q  326 gtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagt 425  Q
    |||||||||||||||||||||||||| |||||||| |||  ||||||||||||| || |||||||||  |||||| ||||||| ||   |||||||||||    
T  30352356 gtggctcagcttgggtgttggggtctcggagtttttttt--agggtgttctttgtggatgagtagtgacgatgggtggtggtggataccgtgtttacagt 30352259  T
Q  426 gcttgtttttt 436  Q
     ||||||||||    
T  30352258 acttgtttttt 30352248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 14755339 - 14755286
Alignment:
Q  168 ctaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14755339 ctaaagtctggtgggccgatcacttttgattcaagatcgggagtcagttctttg 14755286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 47945713 - 47945790
Alignment:
Q  168 ctaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||| || |||| |||||||| | ||||||||||||    
T  47945713 ctaaagtccggtgggccgatcacttttgattcgagatcgggagtcagttatttggctcaagtttgattttgggctttt 47945790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 363
Target Start/End: Original strand, 21342603 - 21342735
Alignment:
Q  229 ttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtg 328  Q
    ||||||||| |||||||||||| ||||||||| | |||||| ||||||| |||||| |||||||||| ||||||||| || ||  ||| ||||| | |||    
T  21342603 ttggtttttaggcttttgtttt-gtgctctttcgatggatcagaggtcgagaggttgtggaagctgcttgttcattcggttagaagcttttcga-atgtg 21342700  T
Q  329 gctcagcttgggtgttggggtctaggagttttatt 363  Q
    ||||  |||||||||||  ||||  ||||||||||    
T  21342701 gctcgacttgggtgttgaagtctgagagttttatt 21342735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 33144018 - 33143899
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaag-ttggtttttgggcttttgtttttgtgctcttttggtggatcgg 271  Q
    |||||||||  |||||||||||||||| ||||||||||||| |||||||  ||||| || ||||||||||||   ||| ||   ||||| |||||||| |    
T  33144018 gtctggtggatcgatcacttttgattcgagatcgggagtcagttctttggatcaagattagtttttgggctt---tttatggtttctttcggtggatcag 33143922  T
Q  272 aggtcgcgaggttttggaagctg 294  Q
    ||||||||||||  |||||||||    
T  33143921 aggtcgcgaggtggtggaagctg 33143899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 353 - 462
Target Start/End: Original strand, 7105031 - 7105140
Alignment:
Q  353 ggagttttattttgaggg-tgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgtt 451  Q
    ||||||||||||| |||| ||||  || |||||||||||||  |||||| ||||||| ||  ||| |||| |||||||||||| | ||||| ||||||||    
T  7105031 ggagttttattttaaggggtgtttctttggggtgagtagtgacgatgggtggtggtggatactgtttttatagtgcttgttttct-tgaagaagtctgtt 7105129  T
Q  452 ttaggtggtga 462  Q
    |||||||||||    
T  7105130 ttaggtggtga 7105140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 37123397 - 37123466
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||  |||| || | ||||||||||||    
T  37123397 tggtgggccgatcacttttgattcgagattgggagtcagttctttggatcaaatttggttttgggctttt 37123466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 39021342 - 39021273
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||||||||||||||||||||| || |||||||||| |||||||  ||||||  | ||||||||||||    
T  39021342 tggtgggccgatcacttttgattcgaggtcgggagtcagttctttggatcaagtctggttttgggctttt 39021273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 1652979 - 1652883
Alignment:
Q  149 gtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||| || ||||||| || |  ||| |||||||||||||||||||||| ||||| ||||| | |||||||  ||||||| | ||||||||||||    
T  1652979 gtgtccttctgatttggtcctgaactcttgtgggccgatcacttttgattcgagatcaggagttagttctttggttcaagtttggttttgggctttt 1652883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 14879442 - 14879486
Alignment:
Q  168 ctaacgtctggtgggccgatcacttttgattcaagatcgggagtc 212  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||    
T  14879442 ctaaagtctggtgggccgatcacttttgattcgagatcgggagtc 14879486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 14193939 - 14194009
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    ||||||| |||| |||||| || ||||||||||||||||| |||| |||||||  ||||||| ||||||||    
T  14193939 atttggtcctaaagtctggcggaccgatcacttttgattcgagattgggagtcggttctttggctcaagtt 14194009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 30127274 - 30127332
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattct-ttgactcaagtt 230  Q
    |||||||| ||||||| |||||||||| ||||||||||||| |||| ||||||||||||    
T  30127274 gtctggtgagccgatcgcttttgattcgagatcgggagtcagttctcttgactcaagtt 30127332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 5556582 - 5556639
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    |||||||||| ||||| |||||||||| ||||||||||||| |||||||  |||||||    
T  5556582 gtctggtggggcgatcgcttttgattcgagatcgggagtcagttctttggttcaagtt 5556639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 20710777 - 20710740
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggag 210  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  20710777 gtctggtgggccgatcacttttgattcgagatcgggag 20710740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 2782138 - 2782081
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    |||||||||| |||||||||||||||  |||||||||| || || ||||||| |||||    
T  2782138 gtctggtgggacgatcacttttgattttagatcgggagccagttttttgactaaagtt 2782081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 30935456 - 30935387
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||||| |||| |||||||||||||||||||||| | || ||||  ||||||| | ||||| ||||||    
T  30935456 tggtgggctgatcgcttttgattcaagatcgggagttagttatttggttcaagtttggttttgagctttt 30935387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 823498 - 823434
Alignment:
Q  179 tgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctt 243  Q
    ||||||||||||||||||||| |||||| |||||| || ||| | |||||||   ||||||||||    
T  823498 tgggccgatcacttttgattcgagatcgagagtcagttgtttcattcaagttttgttttgggctt 823434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 24099396 - 24099360
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcggga 209  Q
    ||||||||||||||||||||||||||| | |||||||    
T  24099396 gtctggtgggccgatcacttttgattcgatatcggga 24099360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 31424248 - 31424304
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagt 229  Q
    ||||||| ||||| || |||||||||| ||||||||||||| | |||||| ||||||    
T  31424248 gtctggtaggccggtcgcttttgattcgagatcgggagtcagtgctttgattcaagt 31424304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 464
Target Start/End: Original strand, 32010030 - 32010062
Alignment:
Q  432 tttttgtgaaggagtctgttttaggtggtgatg 464  Q
    |||| ||||||||||||||||||||||||||||    
T  32010030 ttttcgtgaaggagtctgttttaggtggtgatg 32010062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 1e-88; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 116 - 464
Target Start/End: Original strand, 8254981 - 8255326
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  ||||||  |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||| | |||||     
T  8254981 atttggtttttctctggtgtaccgggggcgaggggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcag 8255080  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggt 313  Q
    ||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||  || |||||| || ||  ||||| ||||    
T  8255081 ttctttgactcaagttggtttttgggctttg--ttttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgcttgatccatcagttaggt 8255178  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    ||||||||  | ||||||||||||||||||| ||||||  |||||||||||||||||||||||||| ||||||||||||  ||||||  |||||| ||      
T  8255179 gctcttcgtaatgtggctcagcttgggtgttagggtctgtgagttttattttgagggtgttctttgtgggtgagtagtgacgatgggatgtggtggatac 8255278  T
Q  414 tgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||||||||||||||||||||| | |   |||||||||||||||||||||||    
T  8255279 tgtgtttacagtgcttgttttattt---ggagtctgttttaggtggtgatg 8255326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 116 - 464
Target Start/End: Original strand, 8268399 - 8268744
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  ||||||  |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||| | |||||     
T  8268399 atttggtttttctctggtgtaccgggggcgaggggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcag 8268498  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggt 313  Q
    ||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||  || |||||| || ||  ||||| ||||    
T  8268499 ttctttgactcaagttggtttttgggctttg--ttttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgcttgatccatcagttaggt 8268596  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    ||||||||  | ||||||||||||||||||| ||||||  |||||||||||||||||||||||||| ||||||||||||  ||||||  |||||| ||      
T  8268597 gctcttcgtaatgtggctcagcttgggtgttagggtctgtgagttttattttgagggtgttctttgtgggtgagtagtgacgatgggatgtggtggatac 8268696  T
Q  414 tgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||||||||||||||||||||| | |   |||||||||||||||||||||||    
T  8268697 tgtgtttacagtgcttgttttattt---ggagtctgttttaggtggtgatg 8268744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 116 - 464
Target Start/End: Original strand, 30964395 - 30964736
Alignment:
Q  116 atttggtttttctctggtacaccg-ggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  |||| || |||| |||| ||||||||||||||||||   |||| |||||||||||||||||||||  |||||||||||      
T  30964395 atttggtttttctctggtgtaccgagggcgaggggtgccctgctaatttggtactataatctgatgggccgatcacttttgattcgtgatcgggagtccg 30964494  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||| ||  ||||||||| |||||| || ||||    
T  30964495 ttctttgactcaagttggtttttggg-ttttg-tgttgtgctcttttggtggttcggaggtcgcgaggtttgtgatagctgcatgatcattcggttaggt 30964592  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    ||||||||| | ||||| | ||||||||    ||  || ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |    
T  30964593 gctcttcgaaatgtggccctgcttgggt----ggtactgggagttttattttgagggtgttctttgtgggtgagtagtgatgatgggcggtggtgaatat 30964688  T
Q  414 tgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
     || |||||||||| || ||||| |   |||||||||||||||||||||||    
T  30964689 cgtatttacagtgcgtgattttttt---ggagtctgttttaggtggtgatg 30964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 143 - 426
Target Start/End: Complemental strand, 31050761 - 31050478
Alignment:
Q  143 cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    |||| |||| ||| || ||||||| |||| ||||||||||||||||||||||||||| ||||||| ||| |  ||||||  |  ||||||||||||||||    
T  31050761 cgaggggtgccctactgatttggttctaaagtctggtgggccgatcacttttgattcgagatcggaagttaggtctttggtttgagttggtttttgggct 31050662  T
Q  243 tttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtg 342  Q
    ||||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||||||| || ||| ||| ||||||  |||||| ||||||||||    
T  31050661 tttgtttttgtgctctttcagtggatcggaggtcgagaggttgtggaagctgcatgttcattcggttaggagcttttcgat-tgtggctaagcttgggtg 31050563  T
Q  343 ttggggtctaggagttttattttga-gggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtg 426  Q
    |||  |||| |  |||||||||||| |||||||| ||||||||||||||||  |||||  | ||||| || ||||||||||||||    
T  31050562 ttgaagtctggctgttttattttgaggggtgttccttgggggtgagtagtgacgatggatgatggtggatgttgtgtttacagtg 31050478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 116 - 389
Target Start/End: Original strand, 4305679 - 4305951
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    |||| |||||||||||||  ||||||  | || |||| ||||||||||||||||||  |||||||||| |||||||||||||||| ||||||||||| |     
T  4305679 atttcgtttttctctggtgtaccgggggcaagcggtgccctgctaatttggtactatagtctggtggggcgatcacttttgattcgagatcgggagttag 4305778  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    ||||||| ||||||||||||||| ||||||   | |||||||||||||||||  | |||||||| |||||| ||  | ||||||| || ||| || ||||    
T  4305779 ttctttgtctcaagttggtttttaggcttt--gtgttgtgctcttttggtggtccagaggtcgcaaggtttgtgataactgcatgatccttcggtgaggt 4305876  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagta 389  Q
    ||||||||| | |||||||| ||||||| || |||| | ||||||||||||| |||||| |||||| |||||||||    
T  4305877 gctcttcga-atgtggctcaacttgggtatttgggtttgggagttttattttcagggtgatctttgtgggtgagta 4305951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 154 - 392
Target Start/End: Original strand, 2825776 - 2826012
Alignment:
Q  154 ctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgt 253  Q
    ||||| ||||||| |||| ||| ||||||||||||| ||||||||| ||||||||| |||  |||||| |||||  ||||||||||||||||  ||||||    
T  2825776 ctgctgatttggttctaaagtccggtgggccgatcatttttgattcgagatcgggaatcacctctttggctcaatgtggtttttgggctttt-attttgt 2825874  T
Q  254 gctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctag 353  Q
     |||||| |||||||||||||||  |||||| |||||||||||||||||||| || ||| ||| ||||| |||||| |||| ||||||||||  || | |    
T  2825875 actctttcggtggatcggaggtctagaggttgtggaagctgcatgttcattcggttaggagcttttcga-aggtggttcagtttgggtgttgaagtttgg 2825973  T
Q  354 gagttttattttga-gggtgttctttgggggtgagtagtg 392  Q
    |||||||||||||| ||||||||| | |||||||||||||    
T  2825974 gagttttattttgaggggtgttctct-ggggtgagtagtg 2826012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 178 - 456
Target Start/End: Complemental strand, 30167628 - 30167355
Alignment:
Q  178 gtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcg 277  Q
    ||||| |||||||||||||||| ||||||||||||  ||||||||||||||||| |||||||| |||   | ||||||||||| |||||  |||||||||    
T  30167628 gtgggtcgatcacttttgattcgagatcgggagtcggttctttgactcaagttgatttttggggtttg--tgttgtgctctttcggtggtccggaggtcg 30167531  T
Q  278 cgaggttttgga-agctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttct 376  Q
    ||||||||  || |||||||||  | ||| || | | ||||||||| | ||||| || ||||||||||||||| | ||||||||||||||||||||||||    
T  30167530 cgaggtttatgatagctgcatgacccttcggttaagcgctcttcgaaatgtggcccaacttgggtgttggggtatgggagttttattttgagggtgttct 30167431  T
Q  377 ttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttagg 456  Q
    ||| |||||||| |||  | | |||||||||| ||   |||||||||||||||| ||||| |   |||||||||||||||    
T  30167430 ttgtgggtgagtggtgacg-ttggcggtggtggataccgtgtttacagtgcttgattttttt---ggagtctgttttagg 30167355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 189 - 435
Target Start/End: Complemental strand, 35341391 - 35341148
Alignment:
Q  189 acttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgg 288  Q
    ||||||||| | ||||||| |||||  |||||| ||||||||||||||||| |||||||||| ||||||||| |||||||||||| ||| |||||| |||    
T  35341391 acttttgatccgagatcggaagtcagctctttggctcaagttggtttttggccttttgtttt-gtgctctttcggtggatcggagttcgagaggttgtgg 35341293  T
Q  289 aagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttga-gggtgttctttgggggtgag 387  Q
    |||||||||||||||||||| | | ||| ||||| | ||||||||| || |||||||  || | ||||||||||||||| ||||||||| | ||||||||    
T  35341292 aagctgcatgttcattcagttatgagcttttcga-atgtggctcag-tttggtgttgaagtttgggagttttattttgaggggtgttctct-ggggtgag 35341196  T
Q  388 tagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttt 435  Q
    |||||  |||||| ||| | | ||  ||||||||||||| ||||||||    
T  35341195 tagtgacgatgggtggttgcggatactgtgtttacagtgtttgttttt 35341148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 326 - 436
Target Start/End: Complemental strand, 8706061 - 8705951
Alignment:
Q  326 gtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagt 425  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||| ||  ||||||||||||    
T  8706061 gtggctcagcttgggtgttggggtctaagagttttattttgagggtgttctttgtgggtgggtagtgacgatgggcagtggtggatactgtgtttacagt 8705962  T
Q  426 gcttgtttttt 436  Q
    |||||||||||    
T  8705961 gcttgtttttt 8705951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 277
Target Start/End: Original strand, 25753171 - 25753285
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctctt 259  Q
    ||||||| |||| |||||||||| |||||||||||||||| ||||||||||||| ||||||| |||||||| | |||||||||||  || ||||  ||||    
T  25753171 atttggtcctaaagtctggtggggcgatcacttttgattcgagatcgggagtcagttctttggctcaagtttgattttgggcttt--ttattgt-ttctt 25753267  T
Q  260 ttggtggatcggaggtcg 277  Q
    | ||||||||||||||||    
T  25753268 tcggtggatcggaggtcg 25753285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 38637301 - 38637171
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcgga 272  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||| || |||| || ||||||||||   ||| ||   |||||||||||||||||    
T  38637301 gtctggcgggccgatcacttttgattcgagatcgggagtcaattctttggcttaagtagg-ttttgggctt---tttatggtttcttttggtggatcgga 38637206  T
Q  273 ggtcgcgaggttttggaagctgcatgttcattcag 307  Q
    ||||| |||||  ||||||||| ||| || |||||    
T  38637205 ggtcgagaggtggtggaagctgaatgatctttcag 38637171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 464
Target Start/End: Original strand, 20464786 - 20464888
Alignment:
Q  358 tttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggt 457  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||||| ||   |||||||||| | ||||||||| |||   ||| ||||||||||    
T  20464786 tttattttgagggtgttatttgggggtgagtagtgacgatgggcggtggtggataccgtgtttacagggtttgtttttt-tga---agtttgttttaggt 20464881  T
Q  458 ggtgatg 464  Q
    |||||||    
T  20464882 ggtgatg 20464888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 22811242 - 22811157
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||||  ||| ||||||||||||||||| |||| |||| ||||||||||||| ||||||| |||||||| | |||| |||||||    
T  22811242 atttggtcttaaagtctggtgggccgatcattttttattcgagatcgggagtcagttctttggctcaagtttggttttaggctttt 22811157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 40813850 - 40813797
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactca 226  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  40813850 gtctggtgggccgatcacttttgattcgagatcgggagccaattttttgactca 40813797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 53823503 - 53823418
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||||  ||| ||||||||| || |||||||||||||| ||||||||||||| ||||||| |||||||| | ||||||| ||||    
T  53823503 atttggtcataaagtctggtggaccaatcacttttgattcgagatcgggagtcagttctttggctcaagtttggttttgggttttt 53823418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 38929839 - 38929911
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||| ||||||||||||||||||||| |||||  |||||| ||||||| |||||||| | ||||||||||||    
T  38929839 gtctgctgggccgatcacttttgattcgagatcaagagtcagttctttggctcaagtttgattttgggctttt 38929911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 39421080 - 39421038
Alignment:
Q  175 ctggtgggccgatcacttttgattcaagatcgggagtcaattc 217  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  39421080 ctggtgggccgatcacttttgattcgagatcgggagtcaattc 39421038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 36962684 - 36962626
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttgg 232  Q
    ||||||||||||||| ||||||||||| ||||| |||||| | |||||||||||||||||    
T  36962684 gtctggtgggccgattacttttgattcgagatcaggagtc-agtctttgactcaagttgg 36962626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 39041343 - 39041285
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttg 231  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||  | |||||||||||    
T  39041343 gtctggtgggccgatcacttttgattcgagatcaggagtcagtttctagactcaagttg 39041285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 46698854 - 46698784
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaag-ttggtttttgggct 242  Q
    |||||||||||||||  |||||||||| ||||||||||||| |||||||  ||||| || |||||||||||    
T  46698854 gtctggtgggccgattgcttttgattcgagatcgggagtcagttctttggttcaagttttgtttttgggct 46698784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 6600014 - 6599957
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    |||||||||||||||| |||||||||  ||||||||||||  |||||||| |||||||    
T  6600014 gtctggtgggccgatcgcttttgattagagatcgggagtcggttctttgattcaagtt 6599957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 16501746 - 16501815
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||||||||| |||||||||| |||||||||||||  ||||||  || |||| | ||||||||||||    
T  16501746 tggtgggccgatcgcttttgattcgagatcgggagtcagctctttggttctagtttggttttgggctttt 16501815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 21387273 - 21387216
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    ||||||||| ||||||||||||||||| ||||||| ||||| ||||| || |||||||    
T  21387273 gtctggtggaccgatcacttttgattcgagatcggaagtcagttcttcgattcaagtt 21387216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 35800488 - 35800573
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||| || | ||||||||  |||||| |||||||||| ||||||| ||||| |||||||| || |||| | ||||||||||||    
T  35800488 atttggttctgaagtctggtgaaccgatcgcttttgattcgagatcggaagtcagttctttgattccagtttggttttgggctttt 35800573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 49747526 - 49747611
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||| |||| |||||||| |||||||||||||||||  |||||| |||||| ||||||   ||||||| | ||||| ||||||    
T  49747526 atttggttctaaagtctggtgagccgatcacttttgatttgagatcgagagtcagttcttttgatcaagtttggttttgagctttt 49747611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 28966879 - 28966951
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||| || |||||  ||||||||| |||| |||||||| ||||||| |||||||| | ||||||||||||    
T  28966879 gtctggtagggcgatcgtttttgattcgagattgggagtcagttctttggctcaagtttggttttgggctttt 28966951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 2061812 - 2061734
Alignment:
Q  168 ctaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttg 246  Q
    |||| ||||||||||| ||||||||||||||| |||| | |||||| |||||||  |||  || | |||||||||||||    
T  2061812 ctaaagtctggtgggctgatcacttttgattcgagattgagagtcagttctttggatcagttttgattttgggcttttg 2061734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 53756768 - 53756802
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgg 207  Q
    ||||||||||||||||||||||||||| |||||||    
T  53756768 gtctggtgggccgatcacttttgattcgagatcgg 53756802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 2792335 - 2792286
Alignment:
Q  181 ggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    ||||||||||||||||||| ||||||| ||||| ||  ||||||||||||    
T  2792335 ggccgatcacttttgattcgagatcggaagtcagtttcttgactcaagtt 2792286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 24740172 - 24740103
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    |||||||||||||||| ||| | |||||||||||||||||| || ||||  |||| || | |||||||||    
T  24740172 gtctggtgggccgatcgcttataattcaagatcgggagtcagttatttggttcaaatttggttttgggct 24740103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 37707424 - 37707392
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatc 205  Q
    ||||||||||||||||||||||||||| |||||    
T  37707424 gtctggtgggccgatcacttttgattcgagatc 37707392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 41118024 - 41117964
Alignment:
Q  185 gatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||||||||||| ||||||| ||| | ||||||| ||||| || | ||||||||||||    
T  41118024 gatcacttttgattcgagatcggaagtaagttctttggctcaaattaggttttgggctttt 41117964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 5e-88; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 119 - 464
Target Start/End: Original strand, 3867073 - 3867414
Alignment:
Q  119 tggtttttctctggtacaccg-ggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattc 217  Q
    |||||||||||||||  |||| || |||  |||| |||||||||||||||||||  | |||||||| ||||||||||||||| ||| ||||||||| |||    
T  3867073 tggtttttctctggtgtaccgagggcgaagggtggcctgctaatttggtactaaaatatggtgggctgatcacttttgattcgagaccgggagtcagttc 3867172  T
Q  218 tttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctc 317  Q
    ||||||||||||||||||||||||||||| ||| ||||||||  |||||||| |||||||||||||| ||||| ||||||| || ||  |||||||||||    
T  3867173 tttgactcaagttggtttttgggcttttgcttt-gtgctcttgcggtggatcagaggtcgcgaggttatggaaactgcatgatcctttggtcaggtgctc 3867271  T
Q  318 ttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtg 417  Q
    ||||||| ||||||||||||||||||||| || | | ||||||||||||||||||||||||||||||||||||||  ||||| |||||||| || | |||    
T  3867272 ttcgatatgtggctcagcttgggtgttggagtatggaagttttattttgagggtgttctttgggggtgagtagtgacgatggacggtggtggatatcgtg 3867371  T
Q  418 tttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    |||||||   ||| ||||||||||||||| |||||| ||||||||||    
T  3867372 tttacag---ttg-tttttgtgaaggagtttgttttgggtggtgatg 3867414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 116 - 464
Target Start/End: Original strand, 38306215 - 38306559
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  || |||  |||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||| |||| ||||||||     
T  38306215 atttggtttttctctggtgtacagggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagattgggagtcag 38306314  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    ||||||||||||||||||||||||||||||   | ||||||||||| | ||| |||||||||||||||||| ||  ||||||||| || ||| || | ||    
T  38306315 ttctttgactcaagttggtttttgggcttt--gtgttgtgctctttcgatggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagt 38306412  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||  |||||| ||||||| || |    
T  38306413 gctcttcgatatgtggctcagcttgggtgttggggtctgtgagttttattttgagggtgttctttgtaggtgagtagtgacgatgggtggtggtggatat 38306512  T
Q  414 tgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
     |||| | |||| |||||||||||    ||||| |||||||||||||||||    
T  38306513 cgtgtctgcagttcttgttttttg----ggagtttgttttaggtggtgatg 38306559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 116 - 464
Target Start/End: Complemental strand, 47326012 - 47325666
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  ||||||  |||| |||| | ||||||||||||||||  |||||||||||||||| |||||||||  |||||||||||||     
T  47326012 atttggtttttctctggtgtaccgggggcgaggggtgccttgctaatttggtactatagtctggtgggccgatcgcttttgatttgagatcgggagtcag 47325913  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggt 313  Q
     |||||||||||||||||||||||||||||   |  |||||||||| | ||||||||||||||||||||||  || ||||| ||| || ||| || ||||    
T  47325912 ctctttgactcaagttggtttttgggctttg--tgctgtgctctttcgatggatcggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggt 47325815  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  |||||||| || || ||      
T  47325814 gctcttcgaaatgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttctttgtgggtgagtagtgacgatgggcgatgatggatac 47325715  T
Q  414 tgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||||||||||||||||||||||| |   | ||| |||||||||||||||||    
T  47325714 tgtgtttacagtgcttgtttttttt--tgaagtttgttttaggtggtgatg 47325666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 115 - 436
Target Start/End: Complemental strand, 5860416 - 5860095
Alignment:
Q  115 aatttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtca 213  Q
    ||||||||||||||||  |  ||||||  |||| |||| ||||||||||||||||||  ||| |||||||| ||| |||||||||| |||||||||||||    
T  5860416 aatttggtttttctctactgtaccgggggcgaggggtgccctgctaatttggtactatagtccggtgggcctatcgcttttgattcgagatcgggagtca 5860317  T
Q  214 attctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcagg 312  Q
    |||||||||| ||||||||||||||||||||   | ||||||||||| ||||| ||||||||||||||||||  || ||||||||| || |||||| |||    
T  5860316 attctttgacgcaagttggtttttgggctttg--tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcagttagg 5860219  T
Q  313 tgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaatt 412  Q
    |||||||||| | |||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||||  |||||||  ||||||||     
T  5860218 tgctcttcgaaatgtggctcagcttgggtgttggggtctgggagttttattttcagggtgttctttgtggatgagtagtgacgatgggcaatggtgaata 5860119  T
Q  413 ttgtgtttacagtgcttgtttttt 436  Q
      ||||| | ||||||||||||||    
T  5860118 ccgtgttaatagtgcttgtttttt 5860095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 123 - 390
Target Start/End: Original strand, 33435070 - 33435337
Alignment:
Q  123 ttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    |||||||||||  ||||||  |||| |||| |||| |||||||||||||| |||||||| | |||||||||||||||| ||||||||||||| |||||||    
T  33435070 ttttctctggtgtaccgggggcgaggggtgccctgttaatttggtactaaagtctggtgagacgatcacttttgattcgagatcgggagtcagttctttg 33435169  T
Q  222 actcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcg 321  Q
     |||||||| |||| ||||| |||||||| ||||||||| ||||||||||||||||||||||| || ||||| |||| || ||| |||||||||||||||    
T  33435170 tctcaagttcgtttgtgggcatttgtttt-gtgctctttcggtggatcggaggtcgcgaggttgtgaaagctacatgatccttcggtcaggtgctcttcg 33435268  T
Q  322 ataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtag 390  Q
    |   |||||||||||||| ||||| |||||  ||||||| |||||||||||||||||||||||||||||    
T  33435269 aattgtggctcagcttggttgttgaggtctgagagttttcttttgagggtgttctttgggggtgagtag 33435337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 143 - 464
Target Start/End: Complemental strand, 35745926 - 35745602
Alignment:
Q  143 cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    |||| |||| ||| ||||||| || |||| ||||| ||||| ||||||||||||||| ||||||| |||||  |||||| ||||||||||||||||||||    
T  35745926 cgaggggtgccctactaattttgttctaaagtctgatgggctgatcacttttgattcgagatcggaagtcatctctttggctcaagttggtttttgggct 35745827  T
Q  243 tttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgata---ggtggctcagcttgg 339  Q
    |||||||||||||||||| ||||||| |||||| | |||||| |||||||||||||||||||| || ||| ||| |||||||    ||||||||||||||    
T  35745826 tttgtttttgtgctctttcggtggattggaggtggagaggttgtggaagctgcatgttcattcggttaggagcttttcgatatatagtggctcagcttgg 35745727  T
Q  340 gtgttggggtctaggagttttattttgag-ggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgt 438  Q
    ||||||  ||||    ||||||||||||| ||||||||||||||||||||||||  |||||| || |||| || |||||||||  ||| ||| ||| |||    
T  35745726 gtgttgaagtctgactgttttattttgagaggtgttctttgggggtgagtagtgacgatgggtgggggtggatgttgtgtttagtgtgtttg-tttctgt 35745628  T
Q  439 gaaggagtctgttttaggtggtgatg 464  Q
     |||| |||||| |||||||||||||    
T  35745627 taaggtgtctgtcttaggtggtgatg 35745602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 143 - 436
Target Start/End: Original strand, 37794971 - 37795263
Alignment:
Q  143 cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    |||| |||| ||||||||||||||| ||  || |||||||||| ||| ||||||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  37794971 cgaggggtgccctgctaatttggtaatatagtatggtgggccgttcagttttgattcgagatcgggagtcagttctttgagtcaagttggtttttgggct 37795070  T
Q  243 tttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggt 341  Q
    ||   | ||||||||||| ||||| ||||||||||||||||||  || ||||||||| || ||| || |||||||||||||   ||||||||||||||||    
T  37795071 ttg--tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaactgtggctcagcttgggt 37795168  T
Q  342 gttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgtttttt 436  Q
    |||||||| |  |||||||||||||||||||||||||| || | ||||||  ||||||||||||||| ||   ||||||||||||||| ||||||    
T  37795169 gttggggtttgagagttttattttgagggtgttctttgtggttaagtagtaatgatgggcggtggtggataccgtgtttacagtgcttttttttt 37795263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 116 - 436
Target Start/End: Complemental strand, 3419783 - 3419462
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||| ||||||  |||| |||| |||| |||||||||||||| || |||||||| ||||||||||||||| |||||||||||||     
T  3419783 atttggtttttctctggtataccgggggcgaggggtgccctgttaatttggtactaaagtgtggtgggctgatcacttttgattcgagatcgggagtcag 3419684  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
     |||||||||||||||||||||||||| ||||||| |||||||||| |||||||| |||||| | |||||| ||  |||||| || || ||| || ||||    
T  3419683 ctctttgactcaagttggtttttgggc-tttgtttctgtgctctttcggtggatcagaggtcacaaggtttgtgatagctgcttgatccttcggttaggt 3419585  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    || ||||||   |||||| | ||||||||||||||| | ||||||||||||| ||||||||||||| | ||||||||||  ||||  |||||||| || |    
T  3419584 gcgcttcgaattgtggcttaacttgggtgttggggtttgggagttttattttaagggtgttctttgtgagtgagtagtgacgatgaacggtggtggatat 3419485  T
Q  414 tgtgtttacagtgcttgtttttt 436  Q
      |||||||| || |||||||||    
T  3419484 catgtttacaatgnttgtttttt 3419462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 116 - 384
Target Start/End: Complemental strand, 41089875 - 41089607
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  | ||||  |||| ||||  |||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||     
T  41089875 atttggtttttctctggtgtatcgggggcgaggggtgctctgctaatttggtactaaagtctggtggaccgatcacttttgattcgagattgggagtcag 41089776  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtg 314  Q
     ||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |  |||  | |||||    
T  41089775 ctctttgactcaagttggtttttgagcttttg-ttttgtgatctttcggtggatcggaggtcgcgaggttgtggaagctgcatgattcttcgttgaggtg 41089677  T
Q  315 ctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggt 384  Q
    ||||||||   || |||||   |||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  41089676 ctcttcgaagtgtagctcaagatgggtgttagggtctgggagttttattttgagggtgttctttgcgggt 41089607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 153 - 392
Target Start/End: Original strand, 34389954 - 34390192
Alignment:
Q  153 cctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttg 252  Q
    |||||| |||||||  ||| ||||||||||||||||||||||||||| |||||||||||||  |||||| || ||||||||||||||||||||  |||||    
T  34389954 cctgctgatttggttttaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggcttaagttggtttttgggctttt-attttg 34390052  T
Q  253 tgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtcta 352  Q
    |||||||| |||||||||||||||| |||||| ||||||||||||||||||||  | ||| ||| ||| | | |||||||| |||||||||||  ||||     
T  34390053 tgctctttcggtggatcggaggtcgagaggttgtggaagctgcatgttcattcgattaggagcttttc-aaatgtggctcaacttgggtgttgtagtctg 34390151  T
Q  353 ggagttttattttga-gggtgttctttgggggtgagtagtg 392  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  34390152 ggagttttattttgaggggtgttctttggggatgagtagtg 34390192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 183 - 464
Target Start/End: Complemental strand, 44353623 - 44353346
Alignment:
Q  183 ccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgagg 282  Q
    ||||||||||||||||  ||||||||||||| |||||||||| | |||||||||||||||||   | ||||||||||| |||||||||||||||||||||    
T  44353623 ccgatcacttttgatttgagatcgggagtcagttctttgacttatgttggtttttgggcttt--gtgttgtgctctttcggtggatcggaggtcgcgagg 44353526  T
Q  283 ttt-tggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagtttta-ttttgagggtgttctttgg 380  Q
    ||| ||  ||||||||| || ||| || ||||||||||||| | ||| | | |||||||||||||||||| ||||||||| ||||||||||||||||||     
T  44353525 tttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtgacccggcttgggtgttggggtctgggagttttatttttgagggtgttctttgt 44353426  T
Q  381 gggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
     |||||||||||  ||||| |||||||| ||   |||||||||||||||| |||||     |||||||||||||||||||||||    
T  44353425 aggtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgattttt----tggagtctgttttaggtggtgatg 44353346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 116 - 464
Target Start/End: Original strand, 10244136 - 10244479
Alignment:
Q  116 atttggtttttctctggtacaccgggcc-gagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  ||||||   ||| |||| |||||||||||||| |||   |||||||||||||||||||||||||| |||||||||||||     
T  10244136 atttggtttttctctggtgtaccgggggagaggggtgccctgctaatttggtgctataatctggtgggccgatcacttttgattcgagatcgggagtcag 10244235  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    |||||||||||||||| |||||||| ||||   | |||||||||||  |||| |||||||||||||||||| ||  || |||||| || ||| || ||||    
T  10244236 ttctttgactcaagttagtttttggccttt--gtgttgtgctctttcagtggttcggaggtcgcgaggtttgtgatagttgcatgatccttcggttaggt 10244333  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    |||||| ||   ||||||||||||||||||| |||||| ||| ||||| || ||||||| |||||| ||||||||||||  |||||||| ||||| ||      
T  10244334 gctctttgaattgtggctcagcttgggtgtttgggtctgggatttttagttggagggtggtctttgtgggtgagtagtgacgatgggcgatggtggatac 10244433  T
Q  414 tgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
      ||||||| |||||| ||||||     ||||| |||||||||||||||||    
T  10244434 catgtttacggtgcttatttttt-----ggagtttgttttaggtggtgatg 10244479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 143 - 299
Target Start/End: Original strand, 6584891 - 6585046
Alignment:
Q  143 cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    |||| |||| |||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||  |||||| || |||||||||||||||||    
T  6584891 cgaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggcttaagttggtttttgggct 6584990  T
Q  243 tttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgt 299  Q
    |||| ||||||||||||| |||||||||||||| | |||||| ||||| ||||||||    
T  6584991 tttg-ttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 6585046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 117 - 464
Target Start/End: Original strand, 25160770 - 25161108
Alignment:
Q  117 tttggtttttctctggtacaccg-ggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaat 215  Q
    |||||||||||||||||  |||| || |||| |||| |||||||||||||| |||  ||||||||| ||||| ||||||||||| ||||||| ||||||     
T  25160770 tttggtttttctctggtgtaccgagggcgaggggtgccctgctaatttggttctatagtctggtggaccgattacttttgattcgagatcggaagtcaaa 25160869  T
Q  216 tctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggtg 314  Q
    ||||  | | |||||||||||||||||     | ||||||||||| ||||||| ||||||| | |||||| ||  |||||  || || |||||| |||||    
T  25160870 tcttgaaattaagttggtttttgggct----gtgttgtgctctttcggtggattggaggtctcaaggtttgtgatagctgtgtgatccttcagttaggtg 25160965  T
Q  315 ctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaatttt 414  Q
    ||||| || | |||||||| ||| | |||||||||||  ||||||  |||| | ||||||||||| ||||||||||||  |||||||| ||||| ||  |    
T  25160966 ctcttggaaatgtggctcaacttagatgttggggtctgagagttt--ttttaaaggtgttctttgtgggtgagtagtgacgatgggcgttggtggatact 25161063  T
Q  415 gtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
     |||||||| ||||||||||||     | |||||||||||||||||||||    
T  25161064 atgtttacattgcttgtttttt-----gaagtctgttttaggtggtgatg 25161108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 288 - 436
Target Start/End: Complemental strand, 31972089 - 31971941
Alignment:
Q  288 gaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgag 387  Q
    |||| |||||| || ||| || ||||||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||    
T  31972089 gaaggtgcatgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctgggagttttatttggagggtgttctttgtgggtgag 31971990  T
Q  388 tagtggtgatgggcggtggtgaattttgtgtttacagtgcttgtttttt 436  Q
    |||||  |||||||||||||  ||   ||||||||||||||||||||||    
T  31971989 tagtgacgatgggcggtggttgataccgtgtttacagtgcttgtttttt 31971941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 119 - 392
Target Start/End: Original strand, 8745110 - 8745384
Alignment:
Q  119 tggtttttctctggtacaccg-ggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattc 217  Q
    |||| |||||||||| ||||| ||  ||| |||| ||| || ||||||| ||||  |||||||||||||||||||||||||| ||||||||| ||| |||    
T  8745110 tggtgtttctctggtgcaccgagggtgaggggtggccttctgatttggtcctaaattctggtgggccgatcacttttgattcgagatcgggattcagttc 8745209  T
Q  218 tttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctc 317  Q
     |||  ||||||| | ||||||||||   ||| ||   ||||| |||||||||||||||| |||||| ||||||||||||| || |||||  ||| |||     
T  8745210 gttggatcaagtttggttttgggctt---tttatggtttctttcggtggatcggaggtcgagaggttgtggaagctgcatgatctttcagataggagctt 8745306  T
Q  318 ttcgataggtggctcagcttgggtgttggggtctaggagttttattttgaggg----tgttctttgggggtgagtagtg 392  Q
    ||||  | |||||||||||| ||||||   | || ||||||| ||||||||||    | ||||||||||||||||||||    
T  8745307 ttcg-gatgtggctcagctttggtgttcaagactgggagtttaattttgaggggtgtttttctttgggggtgagtagtg 8745384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 185 - 304
Target Start/End: Complemental strand, 48162083 - 48161964
Alignment:
Q  185 gatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggtt 284  Q
    ||||| ||||||||| ||||||| | ||| ||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||    
T  48162083 gatcatttttgattcgagatcggaaatcagttctttggctcaaattgatttttggacttttgtttttgtgctcttttggtggatcagaggtcgagaggtt 48161984  T
Q  285 ttggaagctgcatgttcatt 304  Q
     |||||| ||| ||||||||    
T  48161983 gtggaagttgcttgttcatt 48161964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 326 - 436
Target Start/End: Complemental strand, 3419313 - 3419203
Alignment:
Q  326 gtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagt 425  Q
    |||||| | ||||||||||||||| | ||||||||||||| |||||||| |||| | |||||||||| |||||  |||||||| || |  |||||||| |    
T  3419313 gtggcttaacttgggtgttggggtttgggagttttattttaagggtgttttttgtgagtgagtagtgatgatgaacggtggtggatatcatgtttacaat 3419214  T
Q  426 gcttgtttttt 436  Q
    |||||||||||    
T  3419213 gcttgtttttt 3419203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 9349761 - 9349832
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttt 244  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  |  ||||||| | |||||||||||    
T  9349761 gtctggtgggccgatcacttttgattcgagatcgggagtcaattctcaggttcaagtttgattttgggcttt 9349832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 355 - 460
Target Start/End: Complemental strand, 40726392 - 40726291
Alignment:
Q  355 agttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgtttta 454  Q
    |||||||||||||||||||||||| | ||||||||||| |||| |||||||||| ||   |||||||| ||||||| ||||| |   |||||||||||||    
T  40726392 agttttattttgagggtgttcttt-gtggtgagtagtgatgataggcggtggtggataccgtgtttaccgtgcttgattttttt---ggagtctgtttta 40726297  T
Q  455 ggtggt 460  Q
    ||||||    
T  40726296 ggtggt 40726291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 1320793 - 1320863
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    |||||||  ||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||||||    
T  1320793 atttggtcataaagtctggtgggccgatcacttttgattcaaaatcggaagtcagttctttggctcaagtt 1320863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 24324864 - 24324810
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  24324864 tggtgggccgatcaattttgattcgagatcgggagtcaattctttggctcaagtt 24324810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 42533334 - 42533264
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    ||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||||| ||||| || |||||    
T  42533334 atttggtcctaaagtctggtgggctgatcacttttgattcgagatcgggagtcaatcctttggcttaagtt 42533264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 6716805 - 6716748
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  6716805 gtctggttggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtt 6716748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 13311851 - 13311908
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||||    
T  13311851 gtctggtgggccgatcacttttgattcgagatcgggagtcagttctttggttcaagtt 13311908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 3478352 - 3478471
Alignment:
Q  161 tttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttt 260  Q
    |||||| |||| || |||||||||||||||||||||||| ||||||||||| | ||||||| |||||| |   ||||||||||   | || ||| |||||    
T  3478352 tttggtcctaaagtttggtgggccgatcacttttgattcgagatcgggagttagttctttggctcaagattagttttgggctt---tgttggtgttcttt 3478448  T
Q  261 tggtggatcggaggtcgcgaggt 283  Q
     |||||||||||| ||| |||||    
T  3478449 cggtggatcggagatcgagaggt 3478471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 12480901 - 12480970
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||  ||||||| | |||| |||||||    
T  12480901 tggtgggccgatcgcttttgattcgagatcgggagtcagttctttggttcaagtttggtttttggctttt 12480970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 38485568 - 38485608
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtca 213  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  38485568 gtctggtgggccgatcacttttgattcgagatcgggagtca 38485608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 6585045 - 6585112
Alignment:
Q  326 gtggctcagcttgggtgttggggtctaggagttttattttga-gggtgttctttgggggtgagtagtg 392  Q
    ||||||||||||||||||||  |||| ||||||||||||||| ||||| | ||||| |||||||||||    
T  6585045 gtggctcagcttgggtgttgaagtctgggagttttattttgaggggtgctatttggaggtgagtagtg 6585112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 16829018 - 16828948
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    ||||||| |||| ||||||| ||| ||||||||||| ||| ||||||  ||||| ||||||||||||||||    
T  16829018 atttggtcctaaagtctggttggctgatcacttttgtttcgagatcgaaagtcagttctttgactcaagtt 16828948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 16954652 - 16954722
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    ||||||| |||| ||||||| | ||||||||||||| ||| ||||||  ||||| ||||||||||||||||    
T  16954652 atttggtcctaaagtctggttgaccgatcacttttgtttcgagatcgaaagtcagttctttgactcaagtt 16954722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 23983207 - 23983285
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgttttt 251  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||| ||  |||||||| | ||||||| |||| |||||    
T  23983207 gtctggtgggtcgatcgtttttgattcgagatcgggagtcaattccttagctcaagtttggttttgggttttttttttt 23983285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 44755581 - 44755663
Alignment:
Q  116 atttggtttttctctggtacaccgggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgatt 198  Q
    ||||||| ||||||||||  |||| |  ||| |||| ||| || ||||||| |||| ||||||||||||||||||||||||||    
T  44755581 atttggtgtttctctggtgtaccgtggtgaggggtgcccttctgatttggtcctaaagtctggtgggccgatcacttttgatt 44755663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 46133360 - 46133274
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaag-ttggtttttgggctttt 245  Q
    ||||||| || | |||||||| ||||||| |||||||||  ||||||||||||| |||| ||  ||||| |||||||||||||||||    
T  46133360 atttggtgctgaagtctggtgagccgatcgcttttgatttgagatcgggagtcagttctctggttcaagtttggtttttgggctttt 46133274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 46262188 - 46262151
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggag 210  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  46262188 gtctggtgggccgatcacttttgattcgagatcgggag 46262151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 17802885 - 17802851
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgg 207  Q
    ||||||||||||||||||||||||||| |||||||    
T  17802885 gtctggtgggccgatcacttttgattcgagatcgg 17802851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 11379196 - 11379139
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    |||||||| ||||||| |||||||||| ||||||||||||| | |||||  |||||||    
T  11379196 gtctggtgagccgatcgcttttgattcgagatcgggagtcagtactttggttcaagtt 11379139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 27993605 - 27993568
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggag 210  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  27993605 gtctggtggaccgatcacttttgattcgagatcgggag 27993568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 35206762 - 35206725
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggag 210  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  35206762 gtctggtgggccgatcacttttgatccgagatcgggag 35206725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 1e-82; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 116 - 436
Target Start/End: Original strand, 41920407 - 41920731
Alignment:
Q  116 atttggtttttctctggtacaccgggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaat 215  Q
    ||||||||||||||||||  || ||| |||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||| |    
T  41920407 atttggtttttctctggtgtactggggcgaggggtgccctgctaatttggtactacagtctggtgggccgatcacttttgattcgagatcgggagtcagt 41920506  T
Q  216 tctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgtt-----cattcagtc 309  Q
    ||||||||||||||||| |||||||||||   | ||||||||||| |||||||||||||||||||||||| ||  ||||||||| |     | ||||||     
T  41920507 tctttgactcaagttggattttgggcttt--gtgttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgcatgatcctaaccttcagtt 41920604  T
Q  310 aggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtga 409  Q
    |||||||||||   | |||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||  ||| |||||||||||    
T  41920605 aggtgctcttcatcatgtggctcagcttgggtgttggggtcttggagttttattttgagggtgttttttgtgggtgagtagtgacgataggcggtggtga 41920704  T
Q  410 attttgtgtttacagtgcttgtttttt 436  Q
    ||   ||||||||| ||||||||||||    
T  41920705 ataccgtgtttacattgcttgtttttt 41920731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 117 - 464
Target Start/End: Complemental strand, 24450056 - 24449712
Alignment:
Q  117 tttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaat 215  Q
    |||||||||||||||||  ||||||  |||| |||| ||||||| ||||||||||  || |||||||||||||||||||||||  ||||||| ||||| |    
T  24450056 tttggtttttctctggtgtaccgggggcgaggggtgccctgctattttggtactatagtttggtgggccgatcacttttgatttgagatcggaagtcagt 24449957  T
Q  216 tctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggtg 314  Q
    |||||| || ||||||||||||||| |||   | ||||||||||||||||||||||||||||||||||||  || || |||||| || ||| || |||||    
T  24449956 tctttgtcttaagttggtttttgggatttg--tgttgtgctcttttggtggatcggaggtcgcgaggtttgtgatagttgcatgatccttcggttaggtg 24449859  T
Q  315 ctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaatttt 414  Q
    |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  |||||||||||||| ||       
T  24449858 ctcttcgaaatgcggctcagcttgggtgttggggtctaggagttttattttgagggtgttatttgtgggtgagtagtgacgatgggcggtggtggatacc 24449759  T
Q  415 gtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    |||||||||||||||||||||| |   |||||||  ||||||||||||||    
T  24449758 gtgtttacagtgcttgtttttttt---ggagtctactttaggtggtgatg 24449712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 116 - 464
Target Start/End: Complemental strand, 46692946 - 46692602
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||| ||||||||||||  ||||||  ||||||||| ||||||||||||||  ||  ||||||||||||||||||||||||||| ||||||||||| |     
T  46692946 atttgatttttctctggtgtaccgggggcgagaggtgccctgctaatttggtgatatagtctggtgggccgatcacttttgattcgagatcgggagttag 46692847  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    ||||||| ||||||||||||||||||||||   | ||||||||||| ||||| |||||||||||||||||| ||  ||||||||  || | | || | ||    
T  46692846 ttctttggctcaagttggtttttgggcttt--gtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcattatcctccggttaagt 46692749  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    ||||||||| | |||||||||||||||||||||||||| | |||||||||| |||||||||||||| ||||||||||||  |||||||||||||  || |    
T  46692748 gctcttcgaaatgtggctcagcttgggtgttggggtctggaagttttatttggagggtgttctttgtgggtgagtagtgacgatgggcggtggttgatat 46692649  T
Q  414 tgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
     ||||||||||||||||||||||     ||||| |||||||||||||||||    
T  46692648 cgtgtttacagtgcttgtttttt----tggagtttgttttaggtggtgatg 46692602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 116 - 464
Target Start/End: Complemental strand, 5389548 - 5389205
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||| ||||||||||||  ||||||  |||| |||| || |||||||||||||||  |||||  |||||||||||||||||||| |||||||||||||     
T  5389548 atttgatttttctctggtgtaccgggggcgaggggtgcccagctaatttggtactatagtctgaagggccgatcacttttgattcgagatcgggagtcag 5389449  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    |||||||||||||||| |||||||||||||   | ||||||||||| ||||| |||||||||||||||||| ||  |||| |||| || ||| || | ||    
T  5389448 ttctttgactcaagtttgtttttgggcttt--gtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgttagctacatggtccttcggttaagt 5389351  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||   ||||||||||  |||||||||||||| ||      
T  5389350 gctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttgagggtgttc-ttgtaagtgagtagtgacgatgggcggtggtggatac 5389252  T
Q  414 tgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
     |||||||| ||||||||||||||    ||||| |||||||||||||||||    
T  5389251 cgtgtttacggtgcttgttttttg----ggagtttgttttaggtggtgatg 5389205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 153 - 436
Target Start/End: Original strand, 5459153 - 5459435
Alignment:
Q  153 cctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttg 252  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||| ||||||||||||   | |||    
T  5459153 cctgctaatttggtgctatagtctggtgggccgatcacttttgattcgagatcgggagtcaattatttgattcaagttgatttttgggctttg--tgttg 5459250  T
Q  253 tgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtct 351  Q
    ||||||||  |||| |||||||| |||||||||  || ||||||||| || |||||| |||||||||| || | ||||||||||||||||||||||||||    
T  5459251 tgctctttcagtggttcggaggttgcgaggtttgtgatagctgcatgatccttcagttaggtgctctttgaaatgtggctcagcttgggtgttggggtct 5459350  T
Q  352 aggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgtttttt 436  Q
     | ||||||||||||| ||||||||||| ||||||||||||  |||||||||||||| ||   |||||||||||| |||||||||    
T  5459351 ggaagttttattttgatggtgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgattgtttttt 5459435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 116 - 392
Target Start/End: Complemental strand, 31585887 - 31585610
Alignment:
Q  116 atttggtttttctctggtacaccg-ggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  || | ||  ||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||     
T  31585887 atttggtttttctctggtgtactgagggtgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcag 31585788  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    ||||||||||||||||||||||||||||||   | ||||||| ||| ||||| |||||||||||||||||| ||  ||||| ||| || ||  || ||||    
T  31585787 ttctttgactcaagttggtttttgggcttt--gtgttgtgctatttcggtgggtcggaggtcgcgaggtttgtgatagctgtatgatcctttggttaggt 31585690  T
Q  314 gctcttcgataggtggctcagcttgggtgtt-ggggtctaggagttttattttgagggtgttctttgggggtgagtagtg 392  Q
    ||||||||| | |||||| |||||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||    
T  31585689 gctcttcgaaatgtggctaagcttgggtgttgggggtctgagagttttattttgagggtgttctttgtgggtgagtagtg 31585610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 143 - 400
Target Start/End: Original strand, 7857635 - 7857891
Alignment:
Q  143 cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    |||| |||| |||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| |||||  || |||||||||||||| ||    
T  7857635 cgaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcaactcttttgctgaagttggtttttggcct 7857734  T
Q  243 tttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtg 342  Q
    |||| ||||||||||||| |||||||||| ||||| |||||| |||||||||| ||| ||||| || ||| ||| || || | ||||||||| |||||||    
T  7857735 tttg-ttttgtgctctttcggtggatcggtggtcgagaggttgtggaagctgcttgtccattcggttaggagct-tttgaaatgtggctcagtttgggtg 7857832  T
Q  343 ttggggtctaggagttttattttga-gggtgttctttgggggtgagtagtggtgatggg 400  Q
    |||  |||| ||||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  7857833 ttgaagtctgggagttttattttgaggggtgttctatgggggtgagtagtggcgatggg 7857891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 123 - 351
Target Start/End: Complemental strand, 24684598 - 24684370
Alignment:
Q  123 ttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    |||||||||||  ||||||  |||| |||| ||| |||||||| | |||| |||||||||||||||||||||| |||| |||||||  |||| |||||||    
T  24684598 ttttctctggtgtaccgggggcgaggggtgccctactaatttgattctaaagtctggtgggccgatcacttttaattcgagatcggatgtcagttctttg 24684499  T
Q  222 actcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcg 321  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||| || ||| |||||||||||||||    
T  24684498 actctagttggtttttgggcttttgtttt-gtgctctttcggtggatcggaggtcgcgaggttgtggaagatgcatgatccttcggtcaggtgctcttcg 24684400  T
Q  322 ataggtggctcagcttgggtgttggggtct 351  Q
    | | |||||||| ||||| ||| |||||||    
T  24684399 aaatgtggctcaacttggatgtcggggtct 24684370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 148 - 464
Target Start/End: Complemental strand, 46814561 - 46814247
Alignment:
Q  148 ggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgt 247  Q
    |||| |||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||  | |||| ||||||||||||||| ||||||||     
T  46814561 ggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctttttggctcaagttggttttttggcttttg- 46814463  T
Q  248 ttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggg 347  Q
    ||||||||||||| ||||||||||| |||| ||||||   ||||||||| ||||||||  | ||| ||| ||||| | ||||||| || |||||||||      
T  46814462 ttttgtgctctttcggtggatcggatgtcgagaggttgcagaagctgcaagttcattcgattaggagcttttcga-atgtggctcggcgtgggtgttgaa 46814364  T
Q  348 gtctaggagttttattttga-gggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagt 446  Q
    || | |||||||||||| || ||||||| ||||| |||||||||||  ||||| |||| ||| ||  ||||||||||| | ||| ||| ||| |||| ||    
T  46814363 gtatgggagttttatttcgaggggtgttatttggaggtgagtagtgacgatggacggttgtggatactgtgtttacagggtttg-tttctgttaaggtgt 46814265  T
Q  447 ctgttttaggtggtgatg 464  Q
    |||| |||||||||||||    
T  46814264 ctgtcttaggtggtgatg 46814247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 116 - 347
Target Start/End: Complemental strand, 30686031 - 30685800
Alignment:
Q  116 atttggtttttctctggtacacc-gggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  ||| ||| |||| |||| ||||||||||||||||||  |||| |||||||||||||||||||||  |||||||||||||     
T  30686031 atttggtttttctctggtgtacctggggcgaggggtgccctgctaatttggtactatagtcttgtgggccgatcacttttgatttgagatcgggagtcag 30685932  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    |||||||||||||||||| |||||||||||   | ||||||||||| ||||| |||||||||||||||||| ||  ||||||||| || ||  || ||||    
T  30685931 ttctttgactcaagttggcttttgggcttt--gtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatcctttggttaggt 30685834  T
Q  314 gctcttcgataggtggctcagcttgggtgttggg 347  Q
    |||| | |||| ||||||||||||||||||||||    
T  30685833 gctccttgatatgtggctcagcttgggtgttggg 30685800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 148 - 392
Target Start/End: Original strand, 24658916 - 24659158
Alignment:
Q  148 ggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgt 247  Q
    |||| |||||| ||||||| |||| |||||||||||| |||||||||||||| |||||||||||||  |||||| || |||||||||||||||| ||||     
T  24658916 ggtgccctgctgatttggttctaaagtctggtgggccaatcacttttgattcgagatcgggagtcagctctttggctgaagttggtttttgggc-tttgg 24659014  T
Q  248 ttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggg 347  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||  ||||||||||| || ||  ||| ||||| | |||||||||| |||| |||       
T  24659015 ttttgtgctctttcggtggatcggaggtcgagaggttgtggaagcatcatgttcattcggttagaagcttttcga-atgtggctcagcctgggagtt-aa 24659112  T
Q  348 gtctaggagttttattttga-gggtgttctttgggggtgagtagtg 392  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||    
T  24659113 gtctgggagttttattttgaggggtgttatttgggggtgagtagtg 24659158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 148 - 392
Target Start/End: Complemental strand, 27031934 - 27031692
Alignment:
Q  148 ggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgt 247  Q
    |||| |||||| ||||||| |||| |||| |||||||||||||||||||||| |||||| ||||||  |||||| |||||||||||||| ||| |||||     
T  27031934 ggtgccctgctgatttggttctaaagtctagtgggccgatcacttttgattcgagatcgagagtcagctctttggctcaagttggttttagggattttg- 27031836  T
Q  248 ttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggg 347  Q
    ||||||||||||| |||||||||||||| | |||||| |||||||||||||||||||| || | | ||| ||||| | ||||||||| |||| |||||      
T  27031835 ttttgtgctctttcggtggatcggaggttgagaggttgtggaagctgcatgttcattcggttaagagcttttcga-atgtggctcagtttggatgttgaa 27031737  T
Q  348 gtctaggagttttattttga-gggtgttctttgggggtgagtagtg 392  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||||    
T  27031736 gtctgggagttttattttgaggggtgttctct-ggggtgagtagtg 27031692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 20113647 - 20113523
Alignment:
Q  117 tttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaat 215  Q
    ||||||||||||| |||  ||||||  |||| |||| ||||||||||||||| ||  ||||| |||| |||||| ||||||||||||||||||| ||| |    
T  20113647 tttggtttttctcgggtgtaccgggggcgaggggtgccctgctaatttggtattatagtctgctgggacgatcatttttgattcaagatcgggaatcagt 20113548  T
Q  216 tctttgactcaagttggtttttggg 240  Q
    ||||| ||| |||||||||||||||    
T  20113547 tctttaacttaagttggtttttggg 20113523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 392
Target Start/End: Complemental strand, 6764334 - 6764232
Alignment:
Q  290 agctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagta 389  Q
    ||||||||| || ||| || ||||||||||||| | |||||||| ||||| |  |||||||| ||||||||||||| ||| ||||||||| |||||||||    
T  6764334 agctgcatggtccttcggttaggtgctcttcgaaatgtggctcaacttggatactggggtctgggagttttattttcaggatgttctttgtgggtgagta 6764235  T
Q  390 gtg 392  Q
    |||    
T  6764234 gtg 6764232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 19598648 - 19598720
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||||||||||||| |||||||||| |||||| |||||| |||||||||||||||| | ||||||| ||||    
T  19598648 gtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttgactcaagtttgattttgggttttt 19598720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 6583298 - 6583237
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    ||||||| |||| ||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  6583298 atttggtcctaaagtctggtggaccgatcacttttgattcgagatcggcagtcaattctttg 6583237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 27102210 - 27102275
Alignment:
Q  180 gggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||||||||||||||||| ||||||||||||| |||||||  ||||||| | ||||||||||||    
T  27102210 gggccgatcacttttgattcgagatcgggagtcagttctttggatcaagtttggttttgggctttt 27102275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 32864643 - 32864558
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||| |||| | |||||||||| ||||||||| |||| ||||||| ||||  |||||||||||||||| | ||||||||||||    
T  32864643 atttggtcctaaaggctggtgggccaatcacttttaattcgagatcggaagtcggttctttgactcaagtttggttttgggctttt 32864558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 6804739 - 6804814
Alignment:
Q  361 attttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgtttttt 436  Q
    ||||| ||||||||||||| ||||||| ||||  |||||||||||||| ||  ||| |||||||||||||||||||    
T  6804739 attttcagggtgttctttgtgggtgaggagtgacgatgggcggtggtggatactgtatttacagtgcttgtttttt 6804814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 17033585 - 17033655
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    ||||||| |||  |||||||||||||||||||||||| || ||||||||||||| |||||||  |||||||    
T  17033585 atttggtcctatagtctggtgggccgatcacttttgaatcgagatcgggagtcagttctttggttcaagtt 17033655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 9313371 - 9313310
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    ||||||| |||| |||| |||||| ||||||||||||||| ||||||||||||| |||||||    
T  9313371 atttggtcctaaagtctagtgggctgatcacttttgattcgagatcgggagtcagttctttg 9313310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 464
Target Start/End: Complemental strand, 30685797 - 30685706
Alignment:
Q  370 gtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    |||||||||| ||||| ||||||  |||||||||||||| ||   ||||||||| ||||||||||   ||  |||||||||||||||||||||||    
T  30685797 gtgttctttgtgggtgtgtagtgaagatgggcggtggtggataccgtgtttacattgcttgtttt---tgttggagtctgttttaggtggtgatg 30685706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 38544807 - 38544759
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  38544807 gtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttg 38544759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 34774870 - 34774955
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtca-attctttgactcaagttggtttttgggctttt 245  Q
    ||||||| |||||||||||||| |||||||||||||| || |||||||||||||  || |||| ||||||||   ||||||||||||    
T  34774870 atttggtcctaacgtctggtggaccgatcacttttga-tcgagatcgggagtcagtttttttggctcaagtttagttttgggctttt 34774955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 15840981 - 15840924
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    ||||||||||| ||||||||||||||| ||||||||||||| ||  |||| |||||||    
T  15840981 gtctggtgggctgatcacttttgattcgagatcgggagtcagtttcttgattcaagtt 15840924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 22200020 - 22200069
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttga 222  Q
    ||||| ||| |||||||||||||||||||||||| |||||||| ||||||    
T  22200020 gtctgatggaccgatcacttttgattcaagatcgagagtcaatgctttga 22200069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 464
Target Start/End: Original strand, 32882583 - 32882667
Alignment:
Q  379 gggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||||||||||||||  |||||| |||| || || | |||||||||||||| | |||| ||||||||||| |||||||| |||||||    
T  32882583 gggggtgagtagtgacgatgggtggtgttggatatcgtgtttacagtgctcg-ttttcgtgaaggagtcagttttaggcggtgatg 32882667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 2877652 - 2877711
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttt 236  Q
    ||||||||||||| | ||||||||||||| ||||| | | |||||||||||||||||||||    
T  2877652 tggtgggccgatcgcatttgattcaagattgggag-ccagtctttgactcaagttggtttt 2877711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 4651792 - 4651832
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtca 213  Q
    |||||| |||||||||||||||||||| |||||||||||||    
T  4651792 gtctggggggccgatcacttttgattcgagatcgggagtca 4651832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 22239699 - 22239738
Alignment:
Q  183 ccgatcacttttgattcaagatcgggagtcaattctttga 222  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  22239699 ccgatcacttttgattcaagatcgagagtcaatgctttga 22239738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 16147570 - 16147639
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||| |||| | ||||||||||| ||||||||||| |||||||  ||||||| | |||||| |||||    
T  16147570 tggtgggacgatgaattttgattcaatatcgggagtcagttctttgggtcaagtttgattttggactttt 16147639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 10785524 - 10785456
Alignment:
Q  177 ggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||||| | | ||||| ||| ||||||||||||| || |||| |||||||| | ||||||||||||    
T  10785524 ggtgggccggttaattttgcttcgagatcgggagtcagttgtttggctcaagtttggttttgggctttt 10785456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 30655572 - 30655612
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtca 213  Q
    |||| ||||||||||| |||||||||| |||||||||||||    
T  30655572 gtctagtgggccgatcgcttttgattcgagatcgggagtca 30655612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 2e-81; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 116 - 464
Target Start/End: Complemental strand, 31207488 - 31207144
Alignment:
Q  116 atttggtttttctctggtacacc-gggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  ||| ||| |||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||     
T  31207488 atttggtttttctctggtgtaccaggggcgag-ggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcag 31207390  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggt 313  Q
    |||||||||||||||||| ||||||| |||   | ||||||| ||| ||||||||||||||||||||||||  || ||||| |||  | ||| || ||||    
T  31207389 ttctttgactcaagttggattttgggatttg--tgttgtgctttttcggtggatcggaggtcgcgaggtttgtgatagctgaatgacccttcggttaggt 31207292  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    ||||||||| | ||||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||||||||||  |||||||| ||||| ||      
T  31207291 gctcttcgaaatgtggctcagcttgggtgttggagtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgatgggcgatggtggatac 31207192  T
Q  414 tgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    |||||||||||||||| |||||| |    ||||||||||||||||||||||    
T  31207191 tgtgtttacagtgcttttttttttt---tgagtctgttttaggtggtgatg 31207144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 116 - 436
Target Start/End: Complemental strand, 24995522 - 24995201
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  || |||  |||| |||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||     
T  24995522 atttggtttttctctggtgtactgggggcgaggggtgtcttgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcag 24995423  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    ||||||||||||||||||||||||||||||   | |||||||||||  |||| || ||||||||||||||| ||  ||||||||| || ||| || ||||    
T  24995422 ttctttgactcaagttggtttttgggcttt--gtgttgtgctctttcagtgggtcagaggtcgcgaggtttgtgatagctgcatgatccttcggttaggt 24995325  T
Q  314 gctcttcgataggtggctcagcttgggtgtt-ggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaatt 412  Q
    ||||||||| |  |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||||| ||     
T  24995324 gctcttcgaaatatggctcagcttgggtgttgggggtctaggagttttattttgagggtgttctttgtgcgtgagtagtgacgatgggcggtggtggata 24995225  T
Q  413 ttgtgtttacagtgcttgtttttt 436  Q
      ||||||||| ||||||||||||    
T  24995224 ccgtgtttacaatgcttgtttttt 24995201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 116 - 436
Target Start/End: Original strand, 9519453 - 9519774
Alignment:
Q  116 atttggtttttctctggtacaccgggcc-gagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  ||||||   ||| |||| ||||||||||||||||||  |||| |||||||||||| ||||||||| |||||||||||||     
T  9519453 atttggtttttctctggtgtaccgggggtgaggggtgccctgctaatttggtactatagtctagtgggccgatcagttttgattcgagatcgggagtcag 9519552  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    ||||||||||||||||||||||||||||||   | ||||||||||| ||||| |||||||| |||| |||| ||  ||||||||| |||||| || ||||    
T  9519553 ttctttgactcaagttggtttttgggcttt--gtgttgtgctctttcggtgggtcggaggttgcgaagtttgtgatagctgcatgatcattcggttaggt 9519650  T
Q  314 gctcttcgataggtggctcagcttgggtgtt-ggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaatt 412  Q
    ||||||||| |  |||||||||||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||     
T  9519651 gctcttcgaaatatggctcagcttgggtgttgggggtctgagagttttattttgagggtgttctttgtgggtgagtagtgacgatgggcggtggtggata 9519750  T
Q  413 ttgtgtttacagtgcttgtttttt 436  Q
      |||||||||||| || ||||||    
T  9519751 ccgtgtttacagtgattttttttt 9519774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 116 - 436
Target Start/End: Complemental strand, 37986985 - 37986665
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  ||||||  |||| |||| ||||||||||||||  ||  |||||||||||| |||| ||||||||| |||||||||||||     
T  37986985 atttggtttttctctggtgtaccgggggcgaggggtgccctgctaatttggtgttatagtctggtgggccaatcatttttgattcgagatcgggagtcag 37986886  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    |||||||||||||||||||||||| |||||   | ||||||||||| ||||| |||||||||||||||||| ||  |||||| || || ||| || ||||    
T  37986885 ttctttgactcaagttggtttttgtgcttt--gtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcctgatccttcggttaggt 37986788  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    ||||||||| | |||||||||||||||||||  ||||| |||||||||||| |||||||||||||| ||||||||| ||  |||||| ||||||  ||      
T  37986787 gctcttcgaaatgtggctcagcttgggtgtttcggtctgggagttttatttggagggtgttctttgtgggtgagtaatgacgatgggtggtggtagatac 37986688  T
Q  414 tgtgtttacagtgcttgtttttt 436  Q
     ||||||||| ||||||||||||    
T  37986687 cgtgtttacaatgcttgtttttt 37986665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 116 - 408
Target Start/End: Complemental strand, 32066422 - 32066130
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||| ||  ||||||  |||| |||| |||||||||||||| |||  ||||||||||||||||||||||||||| | |||||||||||     
T  32066422 atttggtttttctctagtgtaccgggggcgaggggtgccctgctaatttggtgctatagtctggtgggccgatcacttttgattcgaaatcgggagtcag 32066323  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
     |||||||||| ||||||||||||||||||   | ||||||||||| ||||| || ||||| ||||||||| ||  ||||||||| |||||| || || |    
T  32066322 ctctttgactccagttggtttttgggcttt--gtgttgtgctctttcggtggttcagaggttgcgaggtttgtgatagctgcatgatcattcggttagat 32066225  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtg 408  Q
    |||||| || | |||| |||||||||||||||||||||  ||||||||||| |||||||||||||| | ||||||||||  ||||||||||||||    
T  32066224 gctctttgaaatgtggttcagcttgggtgttggggtctgagagttttatttggagggtgttctttgtgagtgagtagtgacgatgggcggtggtg 32066130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 116 - 464
Target Start/End: Complemental strand, 34389132 - 34388789
Alignment:
Q  116 atttggtttttctctggtacacc-gggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  ||| ||| |||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||| |||||  ||||||     
T  34389132 atttggtttttctctggtgtaccaggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcaagagtcag 34389033  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    ||||||||||||||||||||||||||||||   | ||||||| ||| ||||||||| |||||| ||||||| ||  ||||   || || |||||| ||||    
T  34389032 ttctttgactcaagttggtttttgggcttt--gtgttgtgctatttcggtggatcgtaggtcgtgaggtttgtgatagct-agtgatccttcagttaggt 34388936  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    | |||||   | |||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||  ||| |||||||||| | |     
T  34388935 gttcttcatcatgtggctcagcttgggtgttggggtatgagagttttattttgagggtgttctttgtgggtgagtagtgacgataggcggtggtgga-ta 34388837  T
Q  414 tgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
     ||||||||| |||||  ||||| |   ||||| |||||||||||||||||    
T  34388836 cgtgtttacattgctttcttttttt---ggagtttgttttaggtggtgatg 34388789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 116 - 372
Target Start/End: Original strand, 36630791 - 36631047
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||| ||||  ||||||  |||| |||| |||||||||||||| |||| |||||||||||||||||||||| |||| |||||||| ||||     
T  36630791 atttggtttttctttggtgtaccgggggcgaggggtgccctgctaatttggttctaaagtctggtgggccgatcacttttaattcgagatcgggtgtcag 36630890  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtg 314  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||| | ||||||||||||||||||||| ||| ||||||||| || ||| ||||||||    
T  36630891 ttctttgactctagtttgtttttgggcttttg-ttttgtgctctttcgatggatcggaggtcgcgaggttgtgggagctgcatgatccttcggtcaggtg 36630989  T
Q  315 ctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtg 372  Q
    |||||||| | |||||||| ||||| ||| |||||||  | |||||| |||| |||||    
T  36630990 ctcttcgaaatgtggctcaacttggatgtgggggtctgcgtgttttagtttgggggtg 36631047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 183 - 464
Target Start/End: Original strand, 20138448 - 20138725
Alignment:
Q  183 ccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgagg 282  Q
    ||||||||||||||||  ||||||||||||| |||||||||| | |||||||||||||||||   | ||||||||||| |||||||||||||||||||||    
T  20138448 ccgatcacttttgatttgagatcgggagtcagttctttgacttatgttggtttttgggcttt--gtgttgtgctctttcggtggatcggaggtcgcgagg 20138545  T
Q  283 ttt-tggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagtttta-ttttgagggtgttctttgg 380  Q
    ||| ||  ||||||||| || ||| || ||||||||||||| | ||| | | |||||||||||||||||| ||||||||| ||||||||||||||||||     
T  20138546 tttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtgacccggcttgggtgttggggtctgggagttttatttttgagggtgttctttgt 20138645  T
Q  381 gggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
     |||||||||||  ||||| |||||||| ||   |||||||||||||||| |||||     |||||||||||||||||||||||    
T  20138646 aggtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgattttt----tggagtctgttttaggtggtgatg 20138725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 143 - 464
Target Start/End: Complemental strand, 15821478 - 15821158
Alignment:
Q  143 cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    |||| |||| |||||| ||||||| |||| ||||||||||| ||||||||||||||| |||||||||||||  ||||||||| | |||||||||||||||    
T  15821478 cgaggggtgccctgctgatttggttctaaagtctggtgggctgatcacttttgattcgagatcgggagtcagctctttgacttatgttggtttttgggct 15821379  T
Q  243 tttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtg 342  Q
    |||| |||||||||||||  ||||||| ||||||| |||||| ||||| |  | ||||||||  || ||| ||| ||||| | ||||||||||| || ||    
T  15821378 tttg-ttttgtgctctttcagtggatcagaggtcgagaggttgtggaaacaacttgttcatttggttaggagcttttcga-atgtggctcagctcggatg 15821281  T
Q  343 ttggggtctaggagttttattttgagg-gtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaa 441  Q
    |||  |||| ||||||||||||||||| ||||||||| || ||||||||||| |||| | ||| ||| |||||||||||||  || ||  ||| ||| ||    
T  15821280 ttgaagtctgggagttttattttgaggagtgttcttttggagtgagtagtggcgatgagtggttgtggattttgtgtttaccttgttttgtttctgttaa 15821181  T
Q  442 ggagtctgttttaggtggtgatg 464  Q
    || |||||| |||||||||||||    
T  15821180 ggtgtctgtcttaggtggtgatg 15821158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 173 - 436
Target Start/End: Complemental strand, 41893469 - 41893209
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcgga 272  Q
    |||||||||||| | |||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||||   | ||||||||||||||||| |  ||    
T  41893469 gtctggtgggccaaccacttttgattcgagatcgggagtcagttctttgtctcaagttg-tttttgggctttg--tgttgtgctcttttggtggttaaga 41893373  T
Q  273 ggtcgcgaggttttgga-agctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggt 371  Q
    |||||| ||||||  || ||||||||| || |||  | |||| |||||||| | |||||||||||||||||||| ||||| |||||| |||||| |||||    
T  41893372 ggtcgcaaggtttgtgatagctgcatgatccttctat-aggtactcttcgaaatgtggctcagcttgggtgttgaggtctgggagttctattttcagggt 41893274  T
Q  372 gttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgtttttt 436  Q
    |||||||| ||||||||||||  ||||| |||||||| ||   ||||||||||| ||||||||||    
T  41893273 gttctttgtgggtgagtagtgacgatggtcggtggtggataccgtgtttacagttcttgtttttt 41893209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 158 - 392
Target Start/End: Complemental strand, 12898358 - 12898126
Alignment:
Q  158 taatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctc 257  Q
    |||||||||| ||  ||||||||  ||||||||||||||||| ||||| ||||||| || | | ||||||||||||||| |||||||   | ||||||||    
T  12898358 taatttggtaatatagtctggtgacccgatcacttttgattcgagatccggagtcagttatctaactcaagttggttttggggctttg--tgttgtgctc 12898261  T
Q  258 ttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggag 356  Q
    ||| | ||| ||||||||||||||||||  || |||||| || || ||| || ||||||||||||| | ||||||||||||||||||||||||||  |||    
T  12898260 tttcgatggttcggaggtcgcgaggtttgtgatagctgc-tgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtcttagag 12898162  T
Q  357 ttttattttgagggtgttctttgggggtgagtagtg 392  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12898161 ttttattttgagggtgttctttgtgggtgagtagtg 12898126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 143 - 436
Target Start/End: Complemental strand, 16457559 - 16457282
Alignment:
Q  143 cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    |||| ||||||||||||||||| |||||  || |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  16457559 cgaggggtgtcctgctaatttgatactatagtttggtgg-ccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttaggct 16457461  T
Q  243 tttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggt 341  Q
    ||   | ||||||||||| ||||| ||||| |||| ||||||| ||  ||||||||| || |   || |||||||||| || | |||||||||||||       
T  16457460 tt--gtgttgtgctctttcggtggttcggatgtcgtgaggtttgtgatagctgcatgatcttgtggttaggtgctctttgaaatgtggctcagcttg--- 16457366  T
Q  342 gttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgtttttt 436  Q
               ||||||||||||| |||||| |||||  ||||||||||||  ||||| |||||||| ||   ||||||||||||||||||||||    
T  16457365 -----------ggagttttattttcagggtggtctttatgggtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgtttttt 16457282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 192 - 392
Target Start/End: Complemental strand, 38577840 - 38577640
Alignment:
Q  192 tttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaag 291  Q
    |||||||| ||||||||||| | |||||||  | |||||||||||||| |||||||||| ||||||||| |||||||| ||||||| ||| || ||||||    
T  38577840 tttgattcgagatcgggagttagttctttggtttaagttggtttttggacttttgtttt-gtgctctttcggtggatcagaggtcgagagtttgtggaag 38577742  T
Q  292 ctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtct-aggagttttattttgagg-gtgttctttgggggtgagta 389  Q
    |||||||||||||| ||  || ||| ||||| |  |||| || |||||||||||  ||||  |||||||||||||| || ||||||||||||| ||||||    
T  38577741 ctgcatgttcattcggtttggagcttttcga-atatggcgcaacttgggtgttgaagtctggggagttttattttgtggagtgttctttggggatgagta 38577643  T
Q  390 gtg 392  Q
    |||    
T  38577642 gtg 38577640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 464
Target Start/End: Complemental strand, 35816238 - 35816026
Alignment:
Q  248 ttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggg 347  Q
    |||||||||||||||||||||||||||| | ||| || |||||||||||||||||||| || | | | | ||||| | ||||||||| |||| |||||      
T  35816238 ttttgtgctcttttggtggatcggaggttgagagattgtggaagctgcatgttcattcggttaagagtttttcga-atgtggctcagtttggatgttgaa 35816140  T
Q  348 gtctaggagttttattttga-gggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagt 446  Q
    |||   |||||   |||||| ||||||||||||||||||||||||| ||||||| ||| ||| ||  |||||||||| || ||| ||| ||| |||| ||    
T  35816139 gtcagagagtt---ttttgaggggtgttctttgggggtgagtagtgatgatgggtggttgtggatactgtgtttacaatgtttg-tttctgttaaggtgt 35816044  T
Q  447 ctgttttaggtggtgatg 464  Q
    |||| ||| |||||||||    
T  35816043 ctgtcttaagtggtgatg 35816026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 10248680 - 10248504
Alignment:
Q  116 atttggtttttctctggtacaccgggcc-gagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||| ||||||||||  ||||||   ||| |||||||| ||||||| || ||||  | |||||| |||||||||||||||||||||||||||||||     
T  10248680 atttggtgtttctctggtgtaccgggggtgaggggtgtccttctaattttgtcctaaaatttggtggaccgatcacttttgattcaagatcgggagtcag 10248581  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagctg 294  Q
    ||||||| |||||||| | ||||  ||||   | | ||   ||||||||||||||||||| ||||||||  |||||||||    
T  10248580 ttctttggctcaagtttggttttttgctt---tatatggtttcttttggtggatcggaggccgcgaggtggtggaagctg 10248504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 32945767 - 32945700
Alignment:
Q  178 gtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| ||||||| | ||||||||||||    
T  32945767 gtgggctgatcacttttgattcgagatcgggagtcaattctttgattcaagtttggttttgggctttt 32945700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 35821432 - 35821514
Alignment:
Q  354 gagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgtttttt 436  Q
    |||||||||||| ||||||||||||| || ||||||||| |||||||||||| |  ||  |||||||||||||||||||||||    
T  35821432 gagttttattttaagggtgttctttgaggatgagtagtgatgatgggcggtgctagatactgtgtttacagtgcttgtttttt 35821514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 17657128 - 17656999
Alignment:
Q  116 atttggtttttctctggtacaccgggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaat 215  Q
    ||||||| |||||||| |  ||||||  ||| |||| ||| |||| ||||  |||| || ||||||| |||||||||||||||| ||||||||||||| |    
T  17657128 atttggtgtttctctgatgtaccgggatgaggggtgcccttctaagttggacctaaagtatggtgggtcgatcacttttgattcgagatcgggagtcagt 17657029  T
Q  216 tctttgactcaagttggtttttgggctttt 245  Q
    |||||| |||||||| | |||||| |||||    
T  17657028 tctttggctcaagtttggttttggactttt 17656999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 15906698 - 15906767
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||  ||||||| | |||||||||    
T  15906698 gtctggtgggccgatcacatttgattcgagatcgggagtcagttctttggttcaagtttggttttgggct 15906767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 30236197 - 30236125
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||||||| ||||| |||||||||| ||||||||||||| |||||||  ||||||| | ||||||||||||    
T  30236197 gtctggtgggacgatcgcttttgattcgagatcgggagtcagttctttggttcaagtttggttttgggctttt 30236125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 22773598 - 22773699
Alignment:
Q  262 ggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagtttt 360  Q
    ||||||| ||||||| ||||||||  || | || |||| || ||| || ||||||||||||| | ||||||||| |||||||||||||||| ||||||||    
T  22773598 ggtggattggaggtcacgaggtttgtgatatctacatgatccttctgttaggtgctcttcgaaatgtggctcagtttgggtgttggggtctgggagtttt 22773697  T
Q  361 at 362  Q
    ||    
T  22773698 at 22773699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 10552267 - 10552325
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattct 218  Q
    ||||||| || | |||||||||||||||| |||||||||| ||||||||||||| ||||    
T  10552267 atttggttctgaagtctggtgggccgatcgcttttgattctagatcgggagtcagttct 10552325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 12198138 - 12198066
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||||| |||||||||||| ||| || || |||||||| ||||||| |||||||| | ||||| ||||||    
T  12198138 gtctggtggaccgatcacttttaattgaaaattgggagtcagttctttggctcaagtttggttttgagctttt 12198066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 12442566 - 12442494
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||||| |||||||||||| ||| || || |||||||| ||||||| |||||||| | ||||| ||||||    
T  12442566 gtctggtggaccgatcacttttaattgaaaattgggagtcagttctttggctcaagtttggttttgagctttt 12442494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 33967338 - 33967389
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgact 224  Q
    ||||||||||||||||||||||||||| ||||| |||| ||| | |||||||    
T  33967338 gtctggtgggccgatcacttttgattcgagatcaggagccaactttttgact 33967389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 408
Target Start/End: Original strand, 22773815 - 22773861
Alignment:
Q  362 ttttgagggtgttctttgggggtgagtagtggtgatgggcggtggtg 408  Q
    |||||||||||||||||| ||||||||||||  ||||||| ||||||    
T  22773815 ttttgagggtgttctttgtgggtgagtagtgacgatgggcagtggtg 22773861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 40531244 - 40531281
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggag 210  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  40531244 gtctgatgggccgatcacttttgattcgagatcgggag 40531281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 462
Target Start/End: Complemental strand, 17656606 - 17656518
Alignment:
Q  374 tctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtga 462  Q
    |||||||||||||||||||   ||| |||||| || || | || ||| ||||| | ||||||  |||||||||||||||||| ||||||    
T  17656606 tctttgggggtgagtagtgacaatgagcggtgttggatatcgtttttgcagtggtcgtttttcttgaaggagtctgttttagatggtga 17656518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 36631057 - 36631122
Alignment:
Q  395 gatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    |||||||||||||| ||   |||||||||||| |||||||||     |||||||||||||||||||||||    
T  36631057 gatgggcggtggtggataccgtgtttacagtgtttgttttttt----ggagtctgttttaggtggtgatg 36631122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 2e-69; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 154 - 464
Target Start/End: Original strand, 29087474 - 29087777
Alignment:
Q  154 ctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgt 253  Q
    |||||| |||||| |||| ||||||||| | |||| |||||||||| ||||| ||||||| |||||||| |||| ||||||| |||||||||| ||||||    
T  29087474 ctgctattttggttctaaagtctggtggactgatcccttttgattcgagatcaggagtcagttctttgaatcaaattggtttctgggcttttg-ttttgt 29087572  T
Q  254 gctcttttggtggatcggaggtcgcgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctag 353  Q
    ||||||| ||||||||||||||||||||||| ||| |||| |||| || ||  ||||||||||||||| || |||||||| ||| | ||||||||||| |    
T  29087573 gctctttcggtggatcggaggtcgcgaggttatggtagctccatgatcctttggtcaggtgctcttcg-tatgtggctcaacttagatgttggggtctgg 29087671  T
Q  354 gagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgtttt 453  Q
    ||| |||||||||||||| |||||| |||||||||||||  |||||||||||||||||   ||||||||||||||||||||||     ||||||||||||    
T  29087672 gagctttattttgagggt-ttctttaggggtgagtagtgacgatgggcggtggtgaataccgtgtttacagtgcttgtttttt----tggagtctgtttt 29087766  T
Q  454 aggtggtgatg 464  Q
    ||||| |||||    
T  29087767 aggtgctgatg 29087777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 153 - 436
Target Start/End: Original strand, 34378090 - 34378371
Alignment:
Q  153 cctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttg 252  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||   |||||    
T  34378090 cctgctaatttggtactaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgacacaagttggtttttgggcttt--gttttg 34378187  T
Q  253 tgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtct 351  Q
    |||||||| |||||| ||||||||||||||||| ||  || ||  || || ||| || || |||||||||  | |||||||||||||||||||||||| |    
T  34378188 tgctctttcggtggaccggaggtcgcgaggtttgtgatagttgtttgatccttcggttagatgctcttcgtaatgtggctcagcttgggtgttggggttt 34378287  T
Q  352 aggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgtttttt 436  Q
      |||||||||||||||||||||||||| ||||||||||||  ||||| |||||||| ||   ||||||||| ||||||||||||    
T  34378288 gagagttttattttgagggtgttctttgtgggtgagtagtgacgatggacggtggtggataccgtgtttaca-tgcttgtttttt 34378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 116 - 436
Target Start/End: Original strand, 18593197 - 18593517
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||| ||  ||||||  |||| | || |||||||||||||| |||  || | |||||| ||||||||||||||| ||||||||||| |     
T  18593197 atttggtttttctctcgtgtaccgggggcgagggatgccctgctaatttggtgctatagtttagtgggcagatcacttttgattcgagatcgggagttag 18593296  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggt 313  Q
    |||||||||||||||||||||||||||||    | ||||||||||| ||||| |||||||||||||| |||  || || |||||| || ||| || ||||    
T  18593297 ttctttgactcaagttggtttttgggcttag--tgttgtgctctttcggtggttcggaggtcgcgagatttgtgataggtgcatgatccttcggttaggt 18593394  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    | ||||||| | |||||||| ||||||||||||||||| |||||||||||| |||| ||||||||| ||||||||||||  |||||||||||||| ||      
T  18593395 gttcttcgaaatgtggctcaacttgggtgttggggtctgggagttttatttggaggatgttctttgtgggtgagtagtgacgatgggcggtggtggatac 18593494  T
Q  414 tgtgtttacagtgcttgtttttt 436  Q
     ||||||||||||||||||||||    
T  18593495 cgtgtttacagtgcttgtttttt 18593517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 116 - 392
Target Start/End: Original strand, 698315 - 698591
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||  ||||||  |||| |||| |||||||||||||| |||  ||||||||| |||||| |||||||||| ||||||||||||||    
T  698315 atttggtttttctctggtgtaccgggggcgaggggtgccctgctaatttggtgctatagtctggtggaccgatctcttttgattcgagatcgggagtcaa 698414  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
     |||||||||||||||||||||||||||||   | |||| ||||||  |||| || ||||| ||||||||| ||  ||||||||  || ||| || ||||    
T  698415 ctctttgactcaagttggtttttgggcttt--gtgttgtactctttctgtggttcagaggttgcgaggtttgtgatagctgcataatccttcggttaggt 698512  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtg 392  Q
    |||||| || | ||||||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||    
T  698513 gctctttgaaatgtggctcagcttgggtgttggggtctgagagttttatttggagggtgttctttgtgggtgagtagtg 698591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 286 - 464
Target Start/End: Complemental strand, 7161973 - 7161796
Alignment:
Q  286 tggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtg 385  Q
    ||||||||||||| || ||  |||||||| ||||||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||    
T  7161973 tggaagctgcatgatcctttggtcaggtgttcttcgatatgtggctcagcttgtgtgttggggtctgggagttttattttgatggtgttctttgggggtg 7161874  T
Q  386 agtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    |||||||  | |||| ||||||| |  | ||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  7161873 agtagtgacgttgggtggtggtggaaatcgtgtttacagtgcttgt-ttttgtgaaggagtctgttttaggtagtgatg 7161796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 293
Target Start/End: Complemental strand, 7162353 - 7162267
Alignment:
Q  206 gggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttggaagct 293  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||| ||||||||    
T  7162353 gggagtcagttctttgactcaagttggtttttgggtttttg-ttttgtgctctttcgatggatcggaggtcgcgaggttatggaagct 7162267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 13954316 - 13954231
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||| | ||||||||||||    
T  13954316 atttggtcctaaagtctggtgggccgatcacttttgattcgagatcgggagtcattactttggctcaagtttggttttgggctttt 13954231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 7195308 - 7195236
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||    
T  7195308 gtctggtgagccgatcacttttgattcgagatcgggagtcagttctttggctcaagttagagtttgggctttt 7195236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 464
Target Start/End: Complemental strand, 18313636 - 18313426
Alignment:
Q  250 ttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttgggg 348  Q
    |||| |||||| ||||||| | ||||||||||||||  || ||||||||| ||||||  | ||||||||||||| | |||||| || |||||| || ||     
T  18313636 ttgtactctttcggtggattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggcttagtttgggttttagga 18313537  T
Q  349 tctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttgtgtttacagtgcttgttttttgtgaaggagtct 448  Q
    | | |||||||| | || |||||||||||   ||||||||||||  |||| | |||| || || | |||||||| ||| |||||||||     |||||||    
T  18313536 ttttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgagtggtgatggatatcgtgtttacggtgtttgtttttt----tggagtct 18313442  T
Q  449 gttttaggtggtgatg 464  Q
    ||||||||||||||||    
T  18313441 gttttaggtggtgatg 18313426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 7392113 - 7392052
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    ||||||| |||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  7392113 atttggtcctaaagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 7392052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 22675398 - 22675322
Alignment:
Q  168 ctaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttt 244  Q
    |||| ||||||||| ||||||  ||||||||| ||||||||||||| ||||||| |||||||| | |||||||||||    
T  22675398 ctaaagtctggtggaccgatcgattttgattcgagatcgggagtcagttctttggctcaagtttggttttgggcttt 22675322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 298
Target Start/End: Complemental strand, 14302511 - 14302377
Alignment:
Q  161 tttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttt 260  Q
    |||||| |||| ||||||||| | ||||||||||| ||| |||| |||||||| |||||||   |||||| | ||||||||||   ||| ||   |||||    
T  14302511 tttggtcctaaagtctggtggactgatcacttttggttcgagattgggagtcagttctttggagcaagtttggttttgggctt---tttatggtttcttt 14302415  T
Q  261 tggtggatcggaggtcgcgaggttttggaagctgcatg 298  Q
     |||||||||||||||| |||||  |||||||||||||    
T  14302414 cggtggatcggaggtcgagaggtggtggaagctgcatg 14302377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 21402903 - 21402834
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||||||||||||||||  ||| ||||||||||||| |||||||||||| ||| | ||||| ||||||    
T  21402903 tggtgggccgatcacttttagttcgagatcgggagtcagttctttgactcaggtttggttttgagctttt 21402834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 33258976 - 33258903
Alignment:
Q  148 ggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    |||||||| ||  |||||| |||| ||||||||||||||||||||||||||| ||||| ||||| | |||||||    
T  33258976 ggtgtccttctgttttggtgctaaagtctggtgggccgatcacttttgattcgagatcaggagttagttctttg 33258903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 27713081 - 27713153
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||| |||||||||||  ||||||||| ||||||||| ||| ||||||| |||||||| | ||||||||||||    
T  27713081 gtctagtgggccgatcgtttttgattcgagatcgggaatcagttctttggctcaagtttggttttgggctttt 27713153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 39184256 - 39184208
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  39184256 gtctggtgggccgatcacttttgattcgagatcggaagtcagttctttg 39184208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 25992007 - 25992091
Alignment:
Q  161 tttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||| |||| |||||||||||| ||| |||||||||| |||||| |||||| ||||||  ||| || | | ||||||||||||    
T  25992007 tttggtgctaaagtctggtgggccaatcgcttttgattcgagatcgagagtcagttctttagctcgaggttggttttgggctttt 25992091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 245
Target Start/End: Complemental strand, 26046045 - 26045961
Alignment:
Q  161 tttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||||||||||| | |  |||| |||||||| | |||||| |||||    
T  26046045 tttggtcctaaagtctggtgaaccgatcacttttgattcgagatcgggagttagtgttttggctcaagtttggttttggactttt 26045961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 462
Target Start/End: Complemental strand, 7195113 - 7195083
Alignment:
Q  432 tttttgtgaaggagtctgttttaggtggtga 462  Q
    |||||||||||||||||||||||||||||||    
T  7195113 tttttgtgaaggagtctgttttaggtggtga 7195083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 8297498 - 8297552
Alignment:
Q  191 ttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||||| ||||||||||||| ||||||| |||||||| | |||||| |||||    
T  8297498 ttttgattcgagatcgggagtcagttctttggctcaagtttggttttggactttt 8297552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 12046270 - 12046303
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcggga 209  Q
    |||||||||||||||||||||||| |||||||||    
T  12046270 tggtgggccgatcacttttgattcgagatcggga 12046303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 23426356 - 23426425
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggct 242  Q
    ||||||||| |||| |||||||||||| |||| |||||||| ||||| || |||| || | |||||||||    
T  23426356 gtctggtggaccgaacacttttgattcgagattgggagtcagttcttcgaatcaattttggttttgggct 23426425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 4e-61; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 116 - 436
Target Start/End: Original strand, 3117447 - 3117767
Alignment:
Q  116 atttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaa 214  Q
    ||||||||||||||||||   |||||  |||| |||| |||||||||||| |  ||  || ||||||||||||||||||||||||||||||||||||||     
T  3117447 atttggtttttctctggtgttccgggggcgaggggtgccctgctaatttgttgatatagtatggtgggccgatcacttttgattcaagatcgggagtcag 3117546  T
Q  215 ttctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggt 313  Q
    ||||||||||||||||||||||||||||||   | |||||||||||  |||| |||||||||||||||||| ||  || |||||| || |||  | | ||    
T  3117547 ttctttgactcaagttggtttttgggcttt--gtgttgtgctctttatgtggttcggaggtcgcgaggtttgtgatagttgcatgatccttcgattatgt 3117644  T
Q  314 gctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattt 413  Q
    ||||||||| | |||||||| ||||||||||||||||| ||||||||||||  ||||||||||||| |||| ||||| |  |||| |||||||||  |      
T  3117645 gctcttcgaaatgtggctcaacttgggtgttggggtctgggagttttatttatagggtgttctttgtgggtaagtagagacgatgagcggtggtggttac 3117744  T
Q  414 tgtgtttacagtgcttgtttttt 436  Q
     ||||||||||||||||||||||    
T  3117745 cgtgtttacagtgcttgtttttt 3117767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 316 - 464
Target Start/End: Original strand, 14663231 - 14663379
Alignment:
Q  316 tcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaattttg 415  Q
    ||||||| | ||||||| |||||| ||||||||| | ||||||||||||||||| ||||||||| ||||||||||||  |||||||||||||| || |||    
T  14663231 tcttcgaaatgtggctcggcttggatgttggggtttgggagttttattttgaggatgttctttgcgggtgagtagtgacgatgggcggtggtggatattg 14663330  T
Q  416 tgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    |||||||||||||| || ||| |   |||||||||||||||||||||||    
T  14663331 tgtttacagtgctttttgttttttttggagtctgttttaggtggtgatg 14663379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 310 - 436
Target Start/End: Original strand, 10541980 - 10542106
Alignment:
Q  310 aggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtga 409  Q
    ||||||||||||| | |||||||||||||||||||||||||| | |||||||||| |||||| ||||||| ||||||||||||  ||||||||||||||     
T  10541980 aggtgctcttcgaaatgtggctcagcttgggtgttggggtctggaagttttatttggagggtattctttgtgggtgagtagtgacgatgggcggtggtgg 10542079  T
Q  410 attttgtgtttacagtgcttgtttttt 436  Q
    ||   || |||| ||||||||||||||    
T  10542080 ataccgtatttaaagtgcttgtttttt 10542106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 119 - 239
Target Start/End: Complemental strand, 16510425 - 16510304
Alignment:
Q  119 tggtttttctctggtacaccg-ggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattc 217  Q
    |||||||||||||||  |||| || | || |||| |||||||||||||| |||| |||| |||||||||||||||||||||| |||| | |||||| |||    
T  16510425 tggtttttctctggtgtaccgagggcaaggggtgccctgctaatttggttctaaagtctagtgggccgatcacttttgattcgagattgagagtcagttc 16510326  T
Q  218 tttgactcaagttggtttttgg 239  Q
    ||| ||||||||||||||||||    
T  16510325 ttttactcaagttggtttttgg 16510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 32935421 - 32935336
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||| || | |||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||| | |||||| |||||    
T  32935421 atttggtcctgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttcttggactcaagtttgattttggactttt 32935336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 294
Target Start/End: Complemental strand, 20701870 - 20701754
Alignment:
Q  175 ctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggagg 274  Q
    |||||| |||||||||||||||||| ||||||||||| | ||||||| || ||||| | ||||||||||   ||| ||   ||||| |||||||||||||    
T  20701870 ctggtgtgccgatcacttttgattcgagatcgggagttagttctttggcttaagtttggttttgggctt---tttatggtttctttcggtggatcggagg 20701774  T
Q  275 tcgcgaggttttggaagctg 294  Q
    ||| |||||  |||||||||    
T  20701773 tcgagaggtagtggaagctg 20701754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 26216088 - 26215970
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcgga 272  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||| |  |||  || | ||||||||||   |||| ||| |||||||||||| ||||    
T  26216088 gtctggtgggccgatcacttttgattcgagatcgggagtcagttcttcggttcagttttggttttgggctt---ttttggtgttcttttggtggaccgga 26215992  T
Q  273 ggtcgcgaggttttggaagctg 294  Q
    | | ||| |||  |||||||||    
T  26215991 gattgcgcggtggtggaagctg 26215970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 26534815 - 26534742
Alignment:
Q  146 gaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctt 219  Q
    |||||| ||| || ||||||| || | ||||||||||||||||||||||||||| |||| |||||||| |||||    
T  26534815 gaggtggccttctgatttggtcctgaagtctggtgggccgatcacttttgattcgagattgggagtcagttctt 26534742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 9224042 - 9224101
Alignment:
Q  162 ttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    ||||| |||| ||||||||||| |||| |||||||||| ||||||||||||| |||||||    
T  9224042 ttggtcctaaagtctggtgggctgatcgcttttgattcgagatcgggagtcagttctttg 9224101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 34105428 - 34105479
Alignment:
Q  176 tggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaa 227  Q
    |||||||||||||||||||||||| ||||||||||||| ||  |||||||||    
T  34105428 tggtgggccgatcacttttgattcgagatcgggagtcagtttcttgactcaa 34105479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 34092807 - 34092864
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    |||||||| |||||||||||||||||| |||| || |||| ||||||||| |||||||    
T  34092807 gtctggtgagccgatcacttttgattcgagataggaagtctattctttgattcaagtt 34092864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 3880710 - 3880626
Alignment:
Q  116 atttggtttttctctggtacaccg-ggccgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattc 199  Q
    ||||||| ||||||||||  |||| ||  |||||||| ||| || ||||||| |||| || ||||||||||||||||||||||||    
T  3880710 atttggtgtttctctggtttaccgagggtgagaggtgcccttctgatttggtcctaaagtttggtgggccgatcacttttgattc 3880626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 21266112 - 21266196
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttt 244  Q
    ||||||| |||| | |||||||||||||| |||||||||| ||||||||||| | || | ||  ||||||| | |||||||||||    
T  21266112 atttggtcctaaagactggtgggccgatcgcttttgattcgagatcgggagttagttatgtggttcaagtttggttttgggcttt 21266196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 13423482 - 13423549
Alignment:
Q  177 ggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggcttt 244  Q
    ||||| ||||||||||||||||| |||||| |||||  ||||||| |||||||| | || ||||||||    
T  13423482 ggtggaccgatcacttttgattcgagatcgagagtcggttctttggctcaagtttggttatgggcttt 13423549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 464
Target Start/End: Complemental strand, 15120416 - 15120383
Alignment:
Q  431 ttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||||||||||| ||||||||||||||||||||||    
T  15120416 ttttttgtgaatgagtctgttttaggtggtgatg 15120383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 12794101 - 12794173
Alignment:
Q  148 ggtgtcctgctaatttggtactaacgtctggtgggccgatca-cttttgattcaagatcgggagtcaattctt 219  Q
    |||||||| ||  |||||| |||| |||| |||||||||||| |||||||||| ||||| ||||||| |||||    
T  12794101 ggtgtccttctgttttggttctaaagtctagtgggccgatcaacttttgattcgagatcaggagtcagttctt 12794173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 34090375 - 34090415
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtca 213  Q
    |||||||||| |||||| ||||||||| |||||||||||||    
T  34090375 gtctggtgggtcgatcaattttgattcgagatcgggagtca 34090415  T

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Target: scaffold0343 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 203 - 436
Target Start/End: Original strand, 5747 - 5980
Alignment:
Q  203 atcgggagtcaattctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttttgga-agctgcatgttc 301  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||  || |||| | || ||    
T  5747 atcgggagtcagttctttgactcaggttggtttttgggcttt-gtttttgtgctctttcggtagatcggaggtcgcaaggtttgtgatagctacttgatc 5845  T
Q  302 attcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggc 401  Q
     ||| || ||||||||||||  | |||||||||||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||||| |||||||     
T  5846 cttcggttaggtgctcttcgtaatgtggctcagcttgggtgttgggatctgggagttttattttgagggtgttttttgtgggtgagtagtgatgatggga 5945  T
Q  402 ggtggtgaattttgtgtttacagtgcttgtttttt 436  Q
    ||||||| ||    ||||||| |||||||||||||    
T  5946 ggtggtggataccatgtttacggtgcttgtttttt 5980  T

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Target: scaffold0068 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 117 - 464
Target Start/End: Complemental strand, 35897 - 35559
Alignment:
Q  117 tttggtttttctctggtacaccgggc-cgagaggtgtcctgctaatttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaat 215  Q
    |||||||||||||||||  ||||||  |||| |||| |  |||||||||||  ||  |||| |||||||||||||||||||||| |||||||||||| ||    
T  35897 tttggtttttctctggtgtaccgggggcgaggggtgcctagctaatttggttatatagtctagtgggccgatcacttttgattcgagatcgggagtc-at 35799  T
Q  216 tctttgactcaagttggtttttgggcttttgtttttgtgctcttttggtggatcggaggtcgcgaggttt-tggaagctgcatgttcattcagtcaggtg 314  Q
    ||||||||| |||||||||||||||||||   | ||||||||||| ||||||||||||||| |||| ||| ||  ||||||||| ||  || || |||||    
T  35798 tctttgacttaagttggtttttgggcttt--atgttgtgctctttcggtggatcggaggtcacgagatttgtgatagctgcatgatccatcggttaggtg 35701  T
Q  315 ctcttcgataggtggctcagcttgggtgttggggtctaggagttttattttgagggtgttctttgggggtgagtagtggtgatgggcggtggtgaatttt 414  Q
    |||||||| | | |||||||||||||||||||||| | |||||||  |||| || |||||||| |  ||||||| |||  ||||||| |||||| ||  |    
T  35700 ctcttcgaaatgaggctcagcttgggtgttggggtgtgggagttt--tttttagagtgttcttagcaggtgagt-gtgacgatgggcagtggtggatact 35604  T
Q  415 gtgtttacagtgcttgttttttgtgaaggagtctgttttaggtggtgatg 464  Q
    ||||||||||||||||||||||     ||||||||||||||||| |||||    
T  35603 gtgtttacagtgcttgtttttt-----ggagtctgttttaggtgatgatg 35559  T

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Target: scaffold0200 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 19382 - 19467
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||| | ||||||||||||    
T  19382 atttggtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttgggctttt 19467  T

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Target: scaffold0119 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 245
Target Start/End: Complemental strand, 42212 - 42135
Alignment:
Q  168 ctaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||| | ||||||| ||||    
T  42212 ctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttgggatttt 42135  T

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Target: scaffold0063 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 58126 - 58211
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagttggtttttgggctttt 245  Q
    ||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| ||||  ||||||| | |||| |||||||    
T  58126 atttggtcctaaagtttggtgggccgatcacttttgattcaagatcggaagtcaattgtttggatcaagtttggttttaggctttt 58211  T

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Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 36706 - 36773
Alignment:
Q  160 atttggtactaacgtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaa 227  Q
    ||||||| |||| |||||| |||| ||||||||||||||| ||||||||||||| ||||||| |||||    
T  36706 atttggtcctaaagtctggcgggctgatcacttttgattcgagatcgggagtcagttctttgtctcaa 36773  T

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Target: scaffold1613 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 1086 - 1038
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttg 221  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  1086 gtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttg 1038  T

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Target: scaffold0620 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 3842 - 3896
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaa 227  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||  |||||||||    
T  3842 gtctggtgggccgatcaattttgattcgagatcgggagtcagtttcttgactcaa 3896  T

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Target: scaffold0620; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 8141 - 8198
Alignment:
Q  173 gtctggtgggccgatcacttttgattcaagatcgggagtcaattctttgactcaagtt 230  Q
    |||||||| |||||||||||||||||| |||| || |||| ||||||||| |||||||    
T  8141 gtctggtgagccgatcacttttgattcgagataggaagtctattctttgattcaagtt 8198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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