View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0778_low_81 (Length: 295)
Name: NF0778_low_81
Description: NF0778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0778_low_81 |
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Alignment Details
Target: chr1 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 7027977 - 7028243
Alignment:
| Q |
1 |
ctattatgcaccaaattcattcacatttactcttttgttatagactgcagatattgatgagaagagcatccgaaaggatactccagaagatttagttatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
7027977 |
ctattatgcaccaaattcattcacatttactcttttgttatagactgctgatattgatgagaagagcatccgaaaggatactccagaagagttagttatg |
7028076 |
T |
|
| Q |
101 |
gctctagctgaagccaaggtttggattccatcaaactcagttagataaaatgtttatatgtatttagagtaaaaagtcatttgggtccttgaatatcgtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |
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| T |
7028077 |
gctctagctgaagccaaggtttggattccatcaaactcagttagataaaatgtttatatggatttagagttaaaagtcatttgggtccttgaatatcgtc |
7028176 |
T |
|
| Q |
201 |
ctgttttgttttaataatttatttgtagcttatagtgcaaatgtttatcagtgcttatgtataaact |
267 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
7028177 |
ctgttttgttttaataatttatttgtagcttatagtgcaaatgtttatcattgcttatgtataaact |
7028243 |
T |
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