View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0780_high_11 (Length: 293)
Name: NF0780_high_11
Description: NF0780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0780_high_11 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 51 - 227
Target Start/End: Original strand, 1721495 - 1721671
Alignment:
| Q |
51 |
aggacactctaatccaatacaaaaagtgaaacaactaaccccttagacaagcaacaagtgaatacgtatgatacgaggctttggatgggtgatgatttgt |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
1721495 |
aggacactctaatccaatacaaaaagtgaaacaactaaccccttagacaagcaacaagtgaatacgtatgataagaggctttgggtgggtgatgatttgt |
1721594 |
T |
|
| Q |
151 |
ctcgtagctcaggaatcttaataaattacatttgtacatatcaaatgcttaataaagtatatctttaacaatattgg |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
1721595 |
ctcgtagctcaggaatcttaataaattacatttgtacatatcaaatgcttaataaagtatacctttaacaatattgg |
1721671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 7123 times since January 2019
Visitors: 5774