View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0781_low_28 (Length: 260)
Name: NF0781_low_28
Description: NF0781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0781_low_28 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 14 - 260
Target Start/End: Complemental strand, 32505028 - 32504782
Alignment:
| Q |
14 |
acatcatcaaactgtagtaagttagtttaacaatgttggggaatgtaaatttaaggtatgattttgaaattttctataattgactcacaataggtcttac |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |
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| T |
32505028 |
acatcatcaaactgtagtaagttagtttaacaatgttggggaatgtaaatttaaggtatgattttgaaatttactgtaattgactcacaataggtcttac |
32504929 |
T |
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| Q |
114 |
tatttttagaccctgttatgatgatagttttttatgagatagttactgctgatttgtatgcatgcaatttgtttaagcatgcaccatcgaccaacaattg |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
32504928 |
tatttttagaccctgttatgatgatagttttttatgagatagttactgctgatttgtatgcatgcaatttgtttaagcatgcaccattgaccaacaattg |
32504829 |
T |
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| Q |
214 |
aaagtatagcataggcttggtttataatttgtaacaatatatgatga |
260 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
32504828 |
aaagtatagcataggctttgtttataatttgtaacaatatatgatga |
32504782 |
T |
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