View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0781_low_35 (Length: 211)

Name: NF0781_low_35
Description: NF0781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0781_low_35
NF0781_low_35
[»] chr1 (27 HSPs)
chr1 (1-71)||(10423787-10423857)
chr1 (5-71)||(27035838-27035904)
chr1 (5-74)||(13309362-13309431)
chr1 (5-73)||(24961874-24961942)
chr1 (11-71)||(2583065-2583125)
chr1 (6-73)||(11779309-11779376)
chr1 (5-72)||(23487477-23487544)
chr1 (1-68)||(34528908-34528975)
chr1 (10-73)||(35877005-35877068)
chr1 (8-65)||(18332693-18332750)
chr1 (8-57)||(19054385-19054434)
chr1 (16-73)||(20808740-20808797)
chr1 (7-74)||(1624020-1624087)
chr1 (5-72)||(16280457-16280524)
chr1 (1-72)||(34517701-34517772)
chr1 (5-71)||(21813189-21813255)
chr1 (2-64)||(26189220-26189282)
chr1 (7-68)||(26505910-26505971)
chr1 (5-69)||(907647-907711)
chr1 (5-37)||(21464796-21464828)
chr1 (14-64)||(16816227-16816277)
chr1 (15-69)||(19088910-19088964)
chr1 (5-35)||(22522820-22522850)
chr1 (8-44)||(3833439-3833475)
chr1 (16-68)||(10032077-10032129)
chr1 (23-71)||(14986127-14986175)
chr1 (7-71)||(21487822-21487886)
[»] chr6 (39 HSPs)
chr6 (1-73)||(12435976-12436048)
chr6 (1-72)||(9351109-9351180)
chr6 (1-72)||(32569852-32569923)
chr6 (1-72)||(3056959-3057030)
chr6 (9-68)||(20898992-20899051)
chr6 (3-73)||(14372170-14372240)
chr6 (2-71)||(13570488-13570557)
chr6 (12-71)||(13565946-13566005)
chr6 (1-71)||(13575023-13575093)
chr6 (1-71)||(13577562-13577632)
chr6 (10-71)||(18306714-18306775)
chr6 (1-73)||(24127808-24127880)
chr6 (5-72)||(34338079-34338146)
chr6 (8-57)||(24617733-24617782)
chr6 (8-64)||(14641465-14641521)
chr6 (2-72)||(14982413-14982480)
chr6 (5-72)||(16298775-16298843)
chr6 (1-49)||(24353199-24353247)
chr6 (5-71)||(9696844-9696910)
chr6 (5-43)||(26522751-26522789)
chr6 (5-46)||(8462033-8462074)
chr6 (8-57)||(8483632-8483681)
chr6 (5-46)||(10138897-10138938)
chr6 (11-72)||(11319501-11319562)
chr6 (1-57)||(15141904-15141960)
chr6 (5-37)||(19324769-19324801)
chr6 (5-73)||(22955785-22955853)
chr6 (5-73)||(23832540-23832608)
chr6 (9-69)||(27990839-27990899)
chr6 (10-65)||(24205491-24205546)
chr6 (2-65)||(30884423-30884486)
chr6 (15-73)||(13664148-13664206)
chr6 (11-57)||(15050036-15050082)
chr6 (2-72)||(22705338-22705408)
chr6 (5-35)||(27962065-27962095)
chr6 (5-63)||(33314328-33314386)
chr6 (1-34)||(7242898-7242931)
chr6 (12-73)||(9344511-9344572)
chr6 (15-71)||(26592508-26592564)
[»] chr3 (22 HSPs)
chr3 (5-73)||(18517704-18517772)
chr3 (1-72)||(19826397-19826468)
chr3 (8-73)||(26430286-26430351)
chr3 (4-73)||(51661705-51661774)
chr3 (5-72)||(3736507-3736574)
chr3 (1-71)||(1051303-1051373)
chr3 (12-65)||(25760053-25760106)
chr3 (1-73)||(5813543-5813615)
chr3 (5-73)||(16037983-16038051)
chr3 (1-73)||(16053475-16053547)
chr3 (13-68)||(26953940-26953995)
chr3 (5-46)||(47165897-47165938)
chr3 (13-73)||(2928558-2928618)
chr3 (5-73)||(16041528-16041596)
chr3 (8-59)||(19256156-19256207)
chr3 (8-54)||(10623238-10623284)
chr3 (1-39)||(10997449-10997487)
chr3 (7-37)||(14674198-14674228)
chr3 (7-65)||(19185104-19185162)
chr3 (5-46)||(3580438-3580479)
chr3 (8-65)||(16309657-16309714)
chr3 (8-65)||(18490651-18490708)
[»] chr2 (25 HSPs)
chr2 (1-73)||(36802249-36802321)
chr2 (3-72)||(12102833-12102902)
chr2 (5-73)||(20477451-20477519)
chr2 (1-74)||(17377489-17377562)
chr2 (11-72)||(29216635-29216696)
chr2 (11-72)||(29329934-29329995)
chr2 (2-74)||(28698216-28698288)
chr2 (5-72)||(22169951-22170018)
chr2 (1-71)||(40926447-40926517)
chr2 (5-70)||(17679701-17679766)
chr2 (5-74)||(34454916-34454985)
chr2 (5-73)||(38242119-38242187)
chr2 (5-72)||(20632490-20632557)
chr2 (5-72)||(24524061-24524128)
chr2 (2-72)||(40949325-40949395)
chr2 (5-65)||(38376856-38376916)
chr2 (5-72)||(26916654-26916721)
chr2 (10-65)||(28522883-28522938)
chr2 (11-73)||(9892119-9892181)
chr2 (5-37)||(28462146-28462178)
chr2 (5-72)||(30407063-30407130)
chr2 (5-35)||(25971019-25971049)
chr2 (5-46)||(17678300-17678341)
chr2 (5-74)||(20386666-20386735)
chr2 (8-57)||(20434182-20434231)
[»] chr5 (21 HSPs)
chr5 (2-73)||(5781064-5781135)
chr5 (1-74)||(19068677-19068750)
chr5 (4-72)||(6129680-6129748)
chr5 (5-72)||(5784470-5784537)
chr5 (8-67)||(21711528-21711587)
chr5 (5-72)||(21877886-21877953)
chr5 (5-71)||(34995435-34995501)
chr5 (5-71)||(35341915-35341980)
chr5 (8-64)||(15614766-15614822)
chr5 (5-73)||(31329261-31329329)
chr5 (1-64)||(2259390-2259453)
chr5 (12-72)||(12851785-12851845)
chr5 (5-73)||(16574380-16574448)
chr5 (13-73)||(29998556-29998615)
chr5 (5-46)||(28682768-28682809)
chr5 (5-46)||(39324357-39324398)
chr5 (5-37)||(33764508-33764540)
chr5 (5-72)||(13642793-13642860)
chr5 (10-64)||(4120550-4120604)
chr5 (1-34)||(28637640-28637673)
chr5 (1-57)||(24765501-24765557)
[»] scaffold0607 (1 HSPs)
scaffold0607 (1-73)||(291-363)
[»] scaffold0292 (1 HSPs)
scaffold0292 (5-73)||(21246-21314)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-68)||(1483-1550)
[»] chr8 (26 HSPs)
chr8 (5-72)||(21593209-21593276)
chr8 (1-72)||(29840883-29840954)
chr8 (1-72)||(45268820-45268891)
chr8 (2-72)||(10568285-10568355)
chr8 (1-70)||(6001444-6001513)
chr8 (1-72)||(17959885-17959956)
chr8 (5-71)||(16890000-16890066)
chr8 (2-63)||(41600747-41600808)
chr8 (1-69)||(16290878-16290946)
chr8 (5-69)||(23595403-23595467)
chr8 (5-69)||(23604325-23604389)
chr8 (12-71)||(26657700-26657759)
chr8 (5-73)||(14413363-14413431)
chr8 (11-73)||(17274742-17274804)
chr8 (1-62)||(26867480-26867541)
chr8 (5-72)||(11620398-11620465)
chr8 (1-64)||(18036809-18036872)
chr8 (1-66)||(17802724-17802789)
chr8 (5-73)||(14335333-14335401)
chr8 (8-64)||(24184744-24184800)
chr8 (5-35)||(11837165-11837195)
chr8 (13-67)||(22998134-22998188)
chr8 (5-35)||(23124021-23124051)
chr8 (1-65)||(12236815-12236879)
chr8 (8-40)||(19742071-19742103)
chr8 (8-64)||(24317428-24317484)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-73)||(36656-36728)
[»] chr7 (23 HSPs)
chr7 (1-73)||(14073811-14073882)
chr7 (1-73)||(14383839-14383910)
chr7 (3-63)||(28780205-28780265)
chr7 (1-73)||(11295350-11295426)
chr7 (1-73)||(3399535-3399607)
chr7 (1-68)||(1633326-1633393)
chr7 (1-73)||(9062029-9062101)
chr7 (5-61)||(22849520-22849576)
chr7 (3-73)||(24573654-24573724)
chr7 (5-72)||(9114536-9114603)
chr7 (1-51)||(12163417-12163467)
chr7 (5-46)||(12727827-12727868)
chr7 (13-72)||(1748292-1748351)
chr7 (17-72)||(9409089-9409144)
chr7 (5-74)||(3410386-3410456)
chr7 (5-35)||(20936834-20936864)
chr7 (12-65)||(980952-981005)
chr7 (7-72)||(2040063-2040128)
chr7 (11-60)||(25150891-25150940)
chr7 (1-34)||(37375031-37375064)
chr7 (8-44)||(3997173-3997209)
chr7 (5-37)||(18270316-18270348)
chr7 (9-37)||(20617894-20617922)
[»] chr4 (20 HSPs)
chr4 (1-73)||(33040558-33040630)
chr4 (1-72)||(8667083-8667153)
chr4 (1-68)||(39406806-39406873)
chr4 (5-71)||(18234268-18234334)
chr4 (8-65)||(34512089-34512146)
chr4 (8-72)||(44673660-44673724)
chr4 (8-65)||(37005893-37005950)
chr4 (5-57)||(11485197-11485249)
chr4 (5-73)||(20380198-20380266)
chr4 (8-55)||(34657915-34657962)
chr4 (1-46)||(4936047-4936092)
chr4 (5-46)||(7190100-7190141)
chr4 (5-37)||(1924674-1924706)
chr4 (9-73)||(19904597-19904661)
chr4 (8-44)||(44453093-44453129)
chr4 (10-73)||(17941048-17941111)
chr4 (10-73)||(21424777-21424840)
chr4 (10-68)||(11415964-11416022)
chr4 (7-37)||(18025424-18025454)
chr4 (5-37)||(6192611-6192643)
[»] scaffold0437 (2 HSPs)
scaffold0437 (5-72)||(14315-14382)
scaffold0437 (8-64)||(11443-11499)
[»] scaffold0012 (2 HSPs)
scaffold0012 (3-74)||(103730-103801)
scaffold0012 (7-72)||(55761-55826)
[»] scaffold0134 (1 HSPs)
scaffold0134 (5-72)||(2507-2574)
[»] scaffold0068 (1 HSPs)
scaffold0068 (8-67)||(2323-2382)
[»] scaffold0886 (1 HSPs)
scaffold0886 (1-62)||(2804-2865)
[»] scaffold0363 (1 HSPs)
scaffold0363 (5-73)||(5280-5348)
[»] scaffold0007 (1 HSPs)
scaffold0007 (5-73)||(173894-173962)
[»] scaffold1821 (1 HSPs)
scaffold1821 (5-72)||(1006-1073)
[»] scaffold0093 (1 HSPs)
scaffold0093 (5-72)||(16050-16117)
[»] scaffold0196 (1 HSPs)
scaffold0196 (1-71)||(786-856)
[»] scaffold0314 (1 HSPs)
scaffold0314 (20-73)||(582-635)
[»] scaffold0216 (1 HSPs)
scaffold0216 (13-73)||(15069-15129)
[»] scaffold0029 (1 HSPs)
scaffold0029 (5-73)||(129447-129515)
[»] scaffold0002 (1 HSPs)
scaffold0002 (5-73)||(307264-307332)
[»] scaffold0546 (1 HSPs)
scaffold0546 (5-72)||(5856-5923)
[»] scaffold0109 (1 HSPs)
scaffold0109 (5-72)||(7384-7451)
[»] scaffold0265 (1 HSPs)
scaffold0265 (5-71)||(19554-19620)
[»] scaffold0291 (1 HSPs)
scaffold0291 (5-46)||(21885-21926)
[»] scaffold0020 (1 HSPs)
scaffold0020 (5-46)||(123856-123897)
[»] scaffold0125 (1 HSPs)
scaffold0125 (5-37)||(35530-35562)
[»] scaffold0001 (1 HSPs)
scaffold0001 (5-37)||(20692-20724)
[»] scaffold0553 (1 HSPs)
scaffold0553 (5-37)||(7519-7551)
[»] scaffold0356 (1 HSPs)
scaffold0356 (2-34)||(13748-13780)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-57)||(7998-8054)


Alignment Details
Target: chr1 (Bit Score: 59; Significance: 3e-25; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10423857 - 10423787
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  10423857 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttgatgcttgtccactctccttgctta 10423787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 27035904 - 27035838
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||| |||||||||||||| ||||    
T  27035904 tctcgggatgccaacctagttgggatgtcgatgatgcctcttgatgcttgtcctctctccttactta 27035838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 13309431 - 13309362
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttatat 74  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||| | ||||||    
T  13309431 tctcggggtgccaacctagttgggatgtcgatgatgcctcttgatgcctgtccactctcctggtttatat 13309362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 24961874 - 24961942
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||||||||| || ||| | |||  |||||||||||||||||||||    
T  24961874 tctcggggtgccaacctagttgggatgtcgatgatgtctcctgatgtctgtcctctctccttgcttata 24961942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 2583125 - 2583065
Alignment:
Q  11 ggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||||| ||||||||||||||||| |||||||| |||  |||||||||||||||||||    
T  2583125 ggtgccaacttagttgggatgtcgatgatgcctcttgatgtctgtcctctctccttgctta 2583065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 11779376 - 11779309
Alignment:
Q  6 ctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||| |||||||  |||||||||||||| |||  |||||||||||||| ||||||    
T  11779376 ctcggggtgccaacctaattgggataccgatgttgcctcttgatgtctgtcctctctccttacttata 11779309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 23487477 - 23487544
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||| |||| |||||||| ||||||||| |||||| | |||| ||||||||||||||||||||    
T  23487477 tctcggggtaccaatctagttggaatgtcgatgatgcctcctgatgcctgtcctctctccttgcttat 23487544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34528975 - 34528908
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgc 68  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||| ||||  || ||||||||||||    
T  34528975 ggtttcccggggtgccaacctagttgggatgtcgctgtttcctcttgatgcccgttctctctccttgc 34528908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 35877005 - 35877068
Alignment:
Q  10 gggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||||||||||||||||||||||||||| |||| |||  ||||| || ||||||||||||    
T  35877005 gggtgccaacctagttgggatgtcgatgttgcttcttgatgtttgtccactatccttgcttata 35877068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 18332750 - 18332693
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    ||||||||||||||||||||||||||||||||  |||||||||| |||| | ||||||    
T  18332750 cggggtgccaacctagttgggatgtcgatgttttctcttaatgcttgtcttttctcct 18332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 19054434 - 19054385
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcc 57  Q
    ||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  19054434 cggggtgccaacctagttgggatgtcggtgtttcctcttgatgcatgtcc 19054385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 20808797 - 20808740
Alignment:
Q  16 caacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||| ||||||||||||||||| || ||||| |||| |||||||||||||||||||||    
T  20808797 caacttagttgggatgtcgatgatgtctcttgatgcctgtcctctctccttgcttata 20808740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 1624087 - 1624020
Alignment:
Q  7 tcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttatat 74  Q
    ||||||| |||||||||||||||| | ||||||||||||| |||  ||||| |||||||| |||||||    
T  1624087 tcggggtaccaacctagttgggatattgatgttgcctcttgatgtgtgtccactctcctttcttatat 1624020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 16280457 - 16280524
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    |||||||||||||| ||| |||||||||||||| |||| ||| |||  ||||| ||||||||||||||    
T  16280457 tctcggggtgccaatctaattgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttat 16280524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 34517701 - 34517772
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||| |||||||||  |||||||||||||||| | |||| |||| |||| | |||||||||||||    
T  34517701 ggtttctcgggatgccaaccttattgggatgtcgatgtttcttcttgatgcttgtcatttctccttgcttat 34517772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 21813189 - 21813255
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||  | ||| | |||||||||||    
T  21813189 tctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttttccacactccttgctta 21813255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 26189220 - 26189282
Alignment:
Q  2 gtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcc 64  Q
    ||||||||| ||| |||||||||||| || ||||||||  |||||||||||||||| ||||||    
T  26189220 gtttctcggagtgtcaacctagttggaatatcgatgttttctcttaatgcatgtccactctcc 26189282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 26505910 - 26505971
Alignment:
Q  7 tcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgc 68  Q
    ||||||||||||||||| |||  ||||  |||| |||||| |||||||||||||||||||||    
T  26505910 tcggggtgccaacctagctggtttgtcagtgtttcctcttgatgcatgtcctctctccttgc 26505971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 907711 - 907647
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgct 69  Q
    |||| ||||||||| |||||||||||||||||| || ||||| |||  |||| ||||||||||||    
T  907711 tctcagggtgccaatctagttgggatgtcgatgatgtctcttgatgtctgtcatctctccttgct 907647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 21464796 - 21464828
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatg 37  Q
    |||||||||||||||||||||||||||||||||    
T  21464796 tctcggggtgccaacctagttgggatgtcgatg 21464828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 16816277 - 16816227
Alignment:
Q  14 gccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcc 64  Q
    ||||||||||||||||||| | |||| |||||| |||||||||| ||||||    
T  16816277 gccaacctagttgggatgttggtgtttcctcttgatgcatgtccactctcc 16816227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 19088910 - 19088964
Alignment:
Q  15 ccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgct 69  Q
    |||||||| ||| ||||||  |||| |||||| ||||||||||||||||||||||    
T  19088910 ccaacctaattgagatgtcagtgtttcctcttgatgcatgtcctctctccttgct 19088964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 22522850 - 22522820
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcga 35  Q
    |||||||||||||||||||||||||||||||    
T  22522850 tctcggggtgccaacctagttgggatgtcga 22522820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 3833475 - 3833439
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctc 44  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  3833475 cggggtgccaacctagttgggatgtcggtgtagcctc 3833439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 10032129 - 10032077
Alignment:
Q  16 caacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgc 68  Q
    ||||||||||||||||||| |||| |||||| |||| |||||  |||||||||    
T  10032129 caacctagttgggatgtcggtgtttcctcttgatgcctgtcccttctccttgc 10032077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 14986127 - 14986175
Alignment:
Q  23 gttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    |||| ||||||| |||| |||||| |||||||||||||||| |||||||    
T  14986127 gttgtgatgtcggtgtttcctcttgatgcatgtcctctctcattgctta 14986175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 21487886 - 21487822
Alignment:
Q  7 tcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||||||||||||||||||||||||    | |||||| |||| ||||| ||||||| |||||    
T  21487886 tcggggtgccaacctagttgggatgtcgtcacttcctcttgatgcctgtccactctcctggctta 21487822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 5e-24; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12435976 - 12436048
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||    
T  12435976 ggtttgtcggggtgccaacctagttgggatgtcgatgatgcctcctgatgcatgtcctctctccttgcttata 12436048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 9351180 - 9351109
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    |||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||||| ||||||    
T  9351180 ggtttctcggggtgccaacctagttgggatgtcgatgttgtctattgatgcatgtccactctcctcgcttat 9351109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 32569852 - 32569923
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||| |||| ||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  32569852 ggtttctcgaggtgtcaatctagttgggatgtcgatgttgcctcttaatgactgtcctctctccttgcttat 32569923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 3056959 - 3057030
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  3056959 ggtttctcggggtaccaacttagttgggatgtcgatgttgtctcttgatgcctgtccactctccttgcttat 3057030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 20898992 - 20899051
Alignment:
Q  9 ggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgc 68  Q
    |||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  20898992 ggggtgccaacctagttgggatgtcggtgttgcctcttgatgcttgtcctctctccttgc 20899051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 14372240 - 14372170
Alignment:
Q  3 tttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||  |||||  ||||||||||||||    
T  14372240 tttctcggagtgccaacctagttgggatgtcgatgttgcctcttgatgtctgtccattctccttgcttata 14372170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 13570488 - 13570557
Alignment:
Q  2 gtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||||||||||||| ||||||||||||| | |||| |||||| ||||||||||||||||| ||||||    
T  13570488 gtttctcggggtgccaatctagttgggatgtaggtgttccctcttgatgcatgtcctctctccctgctta 13570557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 13565946 - 13566005
Alignment:
Q  12 gtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||||    
T  13565946 gtgccaacctagttgggatgtcgttgttccctcttgatgcatgtcctctctccctgctta 13566005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13575023 - 13575093
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    |||||| ||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||||| ||||||    
T  13575023 ggtttcccggagtgccaacctagttgggatgtcggtgttccctcttgatgcatgtcttctctccctgctta 13575093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13577562 - 13577632
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    |||||| ||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||||| ||||||    
T  13577562 ggtttcccggagtgccaacctagttgggatgtcggtgttccctcttgatgcatgtcttctctccctgctta 13577632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 18306775 - 18306714
Alignment:
Q  10 gggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    |||||||||||||||||||||||||||| || ||| | |||| |||||||||||||||||||    
T  18306775 gggtgccaacctagttgggatgtcgatgatgactcctgatgcctgtcctctctccttgctta 18306714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24127880 - 24127808
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||| ||||||||||||| ||||||||||||| | |||||| |||  |||||||||| ||||||||||    
T  24127880 ggtttctcgaggtgccaacctagctgggatgtcgatgatacctcttgatgtctgtcctctcttcttgcttata 24127808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 34338146 - 34338079
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||||| | |||||| |||  |||| ||||||||| |||||    
T  34338146 tctcggggtgccaacctagttgggatgtcgatgattcctcttgatggctgtcatctctccttacttat 34338079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 24617782 - 24617733
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcc 57  Q
    ||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  24617782 cggggtgccaacctagttgggatgtcggtgtttcctcttgatgcatgtcc 24617733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 14641465 - 14641521
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcc 64  Q
    ||||||||||||||||||||||||||| |||| |||||| |||  ||||||||||||    
T  14641465 cggggtgccaacctagttgggatgtcggtgttccctcttgatgtttgtcctctctcc 14641521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 14982413 - 14982480
Alignment:
Q  2 gtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||   |  ||||||||||||||||||||    
T  14982413 gtttctcgaggtgtcaaccaagttgggatgtcgatgttgcctctt---gtctgtcctctctccttgcttat 14982480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 16298843 - 16298775
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctct-ccttgcttat 72  Q
    ||||||| ||||||||||||||||||||||||| ||||||   |||| |||||||||| ||||||||||    
T  16298843 tctcgggatgccaacctagttgggatgtcgatgatgcctcccgatgcctgtcctctctcccttgcttat 16298775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24353247 - 24353199
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaat 49  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  24353247 ggtttctcggggtgccaatctagttggtatgtcgatgttccctcttaat 24353199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 9696910 - 9696844
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    |||||| |||||||| ||||||||||||||||| || ||  | |||| |||||||||||||||||||    
T  9696910 tctcggcgtgccaacttagttgggatgtcgatgatgacttctgatgcctgtcctctctccttgctta 9696844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 26522751 - 26522789
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcct 43  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  26522751 tctcggggtgccaacctagttgggatgtcgatgatgcct 26522789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 8462033 - 8462074
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    ||||| ||||||||||||||||||||||||||| ||||||||    
T  8462033 tctcgaggtgccaacctagttgggatgtcgatgatgcctctt 8462074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 8483681 - 8483632
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcc 57  Q
    ||||||||||||||||||||||||||  |||| |||||| ||||||||||    
T  8483681 cggggtgccaacctagttgggatgtccgtgtttcctcttgatgcatgtcc 8483632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 10138897 - 10138938
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    ||||||||||||||||||||||||||||||| | ||||||||    
T  10138897 tctcggggtgccaacctagttgggatgtcgacgatgcctctt 10138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 11319501 - 11319562
Alignment:
Q  11 ggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    |||||||||||||||| ||||| | || | |||||| |||||||||||||||||| ||||||    
T  11319501 ggtgccaacctagttgagatgttggtgcttcctcttgatgcatgtcctctctcctagcttat 11319562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15141960 - 15141904
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcc 57  Q
    |||||| |||| |||||||||||||||||||||| |||| |||||| ||||| ||||    
T  15141960 ggtttcccgggttgccaacctagttgggatgtcggtgtttcctcttgatgcacgtcc 15141904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 19324769 - 19324801
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatg 37  Q
    |||||||||||||||||||||||||||||||||    
T  19324769 tctcggggtgccaacctagttgggatgtcgatg 19324801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 22955785 - 22955853
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||||||| | || ||| | |||||  || | ||||||||||||||    
T  22955785 tctcggggtgccaacctagttgggatgtcgacgatgtctcctgatgcacatcatttctccttgcttata 22955853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 23832608 - 23832540
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||||||| | || ||| | |||||  || | ||||||||||||||    
T  23832608 tctcggggtgccaacctagttgggatgtcgacgatgtctcctgatgcacatcatttctccttgcttata 23832540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 27990839 - 27990899
Alignment:
Q  9 ggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgct 69  Q
    |||||||||| |||| ||||||||||||| || ||||| |||| |||| ||||||||||||    
T  27990839 ggggtgccaatctagatgggatgtcgatgatgtctcttgatgcctgtcatctctccttgct 27990899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 24205491 - 24205546
Alignment:
Q  10 gggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    |||||||||| |||||||||||||| | || |||||  ||||||||||||||||||    
T  24205491 gggtgccaacttagttgggatgtcgttctttcctctcgatgcatgtcctctctcct 24205546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 30884423 - 30884486
Alignment:
Q  2 gtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    |||| |||||||| ||||||||||||||||||| || | |  ||| ||||||||||||||||||    
T  30884423 gtttatcggggtgtcaacctagttgggatgtcgttgattctccttgatgcatgtcctctctcct 30884486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 13664206 - 13664148
Alignment:
Q  15 ccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||  ||||||||| || ||||| |||| ||||||| |||||||||||||    
T  13664206 ccaacctagttgaaatgtcgatgatgtctcttgatgcctgtcctccctccttgcttata 13664148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 15050082 - 15050036
Alignment:
Q  11 ggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcc 57  Q
    |||||||||||||||||||| ||| |||| |||||| ||||||||||    
T  15050082 ggtgccaacctagttgggatatcgttgtttcctcttgatgcatgtcc 15050036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 22705338 - 22705408
Alignment:
Q  2 gtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    |||| ||| |||||||||||||||||||||||| |||| |||||| |||  |||| | |||||| ||||||    
T  22705338 gtttatcgaggtgccaacctagttgggatgtcggtgttacctcttgatgtgtgtcatttctcctagcttat 22705408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 27962095 - 27962065
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcga 35  Q
    |||||||||||||||||||||||||||||||    
T  27962095 tctcggggtgccaacctagttgggatgtcga 27962065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 33314328 - 33314386
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctc 63  Q
    ||||||| |||||||||||||| |||||||||| || ||||| |||  |||||||||||    
T  33314328 tctcgggatgccaacctagttgagatgtcgatgatgactcttgatgtctgtcctctctc 33314386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7242931 - 7242898
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcg 34  Q
    |||| |||||||||||||||||||||||||||||    
T  7242931 ggttcctcggggtgccaacctagttgggatgtcg 7242898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 9344511 - 9344572
Alignment:
Q  12 gtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||| ||||  ||||| ||| ||||| | |||||| |||||||    
T  9344511 gtgccaacctagttgggatgtcgttgttttctcttgatgtatgtcatttctcctggcttata 9344572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 26592564 - 26592508
Alignment:
Q  15 ccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||||||||| |||||  ||||  ||||| |||||||| |||||||||||||||    
T  26592564 ccaacctagttggaatgtcagtgttctctcttgatgcatgttctctctccttgctta 26592508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 5e-24; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 18517704 - 18517772
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  18517704 tctcgggatgccaacctagttgggatgtcgatgttgcctcttgatgcatgtccactctccttgcttata 18517772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19826468 - 19826397
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||    
T  19826468 ggtttcttggggtgccaacctagttgggatgtcgatgttgcctcttaatgcttgtcttccctccttgcttat 19826397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 26430286 - 26430351
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||||| |||||    
T  26430286 cggggtgccaacctagttaggatgtcgatgatgcctcttgatgtatgtcctctctccttgtttata 26430351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 51661705 - 51661774
Alignment:
Q  4 ttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  |||||  |||| |||||||||    
T  51661705 ttctcggggtgccaacctagttgggatgtcgatgttgcctcttgatgtctgtccattctcattgcttata 51661774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 3736507 - 3736574
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||  ||||| ||||||||||||||    
T  3736507 tctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttat 3736574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1051373 - 1051303
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    |||||| || |||||||||||||||||||||||| |||| |||||| |||  |||||||||||||||||||    
T  1051373 ggtttcccgaggtgccaacctagttgggatgtcggtgttccctcttgatgtttgtcctctctccttgctta 1051303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 25760053 - 25760106
Alignment:
Q  12 gtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  25760053 gtgccaacctagttgggatgtcggtgttgcctcttgatgcttgtcctctctcct 25760106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5813615 - 5813543
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||| |||| | |||||||| ||| ||||||    
T  5813615 ggtttctcgggatgccaacctagttggtaagtcgatgttgcctcttgatgcctatcctctcttcttacttata 5813543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 16037983 - 16038051
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||| |||||||||||| |||||||||| |||||||| |||  |||| ||||||||||||||||    
T  16037983 tctcggggttccaacctagttgagatgtcgatgatgcctcttgatgtctgtcatctctccttgcttata 16038051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16053475 - 16053547
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||| || ||||||||||| |||||||||| |||||||| |||  |||| ||||||||||||||||    
T  16053475 ggtttctcgggatgtcaacctagttgagatgtcgatgatgcctcttgatgtctgtcatctctccttgcttata 16053547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 26953995 - 26953940
Alignment:
Q  13 tgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgc 68  Q
    |||||||||||||||||||||| |||| |||||| ||||||||| |||||||||||    
T  26953995 tgccaacctagttgggatgtcggtgtttcctcttgatgcatgtcgtctctccttgc 26953940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 47165938 - 47165897
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  47165938 tctcggggtgccaacctagttgggatgtcgatgatgcctctt 47165897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 2928618 - 2928558
Alignment:
Q  13 tgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||| ||||||||||||| |||| |||  ||||| |||||||||||||||    
T  2928618 tgccaacctagttggaatgtcgatgttgcttcttgatgactgtccactctccttgcttata 2928558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 16041528 - 16041596
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||| |||||||||||| |||||||||| |||||||| |||  |||| ||||||| ||||||||    
T  16041528 tctcggggttccaacctagttgagatgtcgatgatgcctcttgatgtctgtcatctctccatgcttata 16041596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 19256156 - 19256207
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctc 59  Q
    |||||||||||||||||| |||||||| |||| |||||| || |||||||||    
T  19256156 cggggtgccaacctagttaggatgtcgttgtttcctcttgatacatgtcctc 19256207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 10623284 - 10623238
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatg 54  Q
    |||||||||||||||||| |||||||| |||| |||||| |||||||    
T  10623284 cggggtgccaacctagttaggatgtcggtgtttcctcttgatgcatg 10623238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10997449 - 10997487
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgtt 39  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  10997449 ggtttctcggggtgccaacctaattgggatgtcggtgtt 10997487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 14674228 - 14674198
Alignment:
Q  7 tcggggtgccaacctagttgggatgtcgatg 37  Q
    |||||||||||||||||||||||||||||||    
T  14674228 tcggggtgccaacctagttgggatgtcgatg 14674198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 19185104 - 19185162
Alignment:
Q  7 tcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    |||||||||||||||||||||||||||| || | |  ||| |||| |||||||||||||    
T  19185104 tcggggtgccaacctagttgggatgtcgttgcttctccttgatgcctgtcctctctcct 19185162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 3580479 - 3580438
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    ||||| |||||||||||||||||||| |||||| ||||||||    
T  3580479 tctcgaggtgccaacctagttgggatttcgatgatgcctctt 3580438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 16309714 - 16309657
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    |||||||||||| ||||||||||||||| | | |||||| |||  |||||||||||||    
T  16309714 cggggtgccaacttagttgggatgtcgaagctacctcttgatgtctgtcctctctcct 16309657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 18490708 - 18490651
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    |||||||||||| ||||||||||||||| | | |||||| |||  |||||||||||||    
T  18490708 cggggtgccaacttagttgggatgtcgaagctacctcttgatgtctgtcctctctcct 18490651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 5e-24; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36802321 - 36802249
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |  ||||||||||||||||||||    
T  36802321 ggtttctcggggtgccaacctagttgagatgtcgatgttgcctcttaatacccgtcctctctccttgcttata 36802249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 12102833 - 12102902
Alignment:
Q  3 tttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||| | ||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  12102833 tttctcgggataccaacatagttgggatgtcgatgttgcctcttgatgtatgtcctctctccttgcttat 12102902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 20477451 - 20477519
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||  |||||| ||||||||||||||    
T  20477451 tctcggggtgccaacctagttgggatgtcgatgatgcctcttgatgtctgtcctttctccttgcttata 20477519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17377562 - 17377489
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttatat 74  Q
    ||||||| |||||||||||||||||| ||| ||| ||||||||||| |||||||||| |||||| |||||||||    
T  17377562 ggtttcttggggtgccaacctagttgagatatcgttgttgcctcttgatgcatgtccactctccatgcttatat 17377489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 29216635 - 29216696
Alignment:
Q  11 ggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||| || |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  29216635 ggtgccaacttaattgggatgtcgatgatgcctcttgatgcatgtcctctctccttgcttat 29216696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 29329934 - 29329995
Alignment:
Q  11 ggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||| || |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  29329934 ggtgccaacttaattgggatgtcgatgatgcctcttgatgcatgtcctctctccttgcttat 29329995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 28698216 - 28698288
Alignment:
Q  2 gtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttatat 74  Q
    |||||||||| |||||||||| |||| ||||||||||| || |||||||  ||||||||||||||||||||||    
T  28698216 gtttctcgggatgccaacctaattggaatgtcgatgttaccccttaatgtttgtcctctctccttgcttatat 28698288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 22170018 - 22169951
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||| |||||||||| ||||||||| |||| |||||||| |||| ||||||||||||||||||||    
T  22170018 tctcgggatgccaacctaattgggatgttgatgatgcctcttgatgcctgtcctctctccttgcttat 22169951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40926517 - 40926447
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    |||||| |||||||||||||||||||||||||||||||| |||| | |||||||||||  |||| ||||||    
T  40926517 ggtttcccggggtgccaacctagttgggatgtcgatgtttcctcctgatgcatgtccttactccctgctta 40926447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 17679766 - 17679701
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctt 70  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||  ||||| ||||||||||||    
T  17679766 tctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgctt 17679701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 34454916 - 34454985
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttatat 74  Q
    |||||||||||||||||| |||||||||||||| || ||||| |||| | |||||||||||||| |||||    
T  34454916 tctcggggtgccaacctaattgggatgtcgatgatgtctcttgatgcctctcctctctccttgcatatat 34454985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 38242187 - 38242119
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||||||||| | || ||| |||| ||||| ||||| |||||||||    
T  38242187 tctcggggtgccaacctagttgggatgtcgatgataccgcttgatgcttgtccactctcattgcttata 38242119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 20632490 - 20632557
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||  |||||  |||||||||||||    
T  20632490 tctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccattctccttgcttat 20632557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 24524128 - 24524061
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||| | || ||| | |||| |||||| |||||||||||||    
T  24524128 tctcggggtgccaacctagttgggatgtcgacgatgtctcctgatgcttgtcctttctccttgcttat 24524061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 40949395 - 40949325
Alignment:
Q  2 gtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    |||||||||||||||||||| |||||| |||||||||   ||||| |||| |||||| |||||||||||||    
T  40949395 gtttctcggggtgccaaccttgttggggtgtcgatgtgttctcttgatgcttgtcctttctccttgcttat 40949325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 38376916 - 38376856
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    ||||| ||||||||||||||| ||||||||||| | |||||| |||||||||| |||||||    
T  38376916 tctcgaggtgccaacctagttaggatgtcgatgatacctcttgatgcatgtccactctcct 38376856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 26916654 - 26916721
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||| | || ||| | |||  |||||| |||||||||||||    
T  26916654 tctcggggtgccaacctagttgggatgtcgacgatgtctcctgatgtttgtcctttctccttgcttat 26916721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 28522883 - 28522938
Alignment:
Q  10 gggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    |||||||||||||||||||||||| ||||| |||||| |||  |||||||||||||    
T  28522883 gggtgccaacctagttgggatgtcaatgtttcctcttgatgtctgtcctctctcct 28522938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 9892181 - 9892119
Alignment:
Q  11 ggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||||||| |||||||||||||| || ||||| |||  |||| ||||||||||||||||    
T  9892181 ggtgccaacctaattgggatgtcgatgatgtctcttgatgtctgtcttctctccttgcttata 9892119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 28462146 - 28462178
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatg 37  Q
    |||||||||||||||||||||||||||||||||    
T  28462146 tctcggggtgccaacctagttgggatgtcgatg 28462178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 30407063 - 30407130
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||| |||  |||||||| ||||||||| || ||| | |||| ||||||||||||||||||||    
T  30407063 tctcggggtaccactctagttggaatgtcgatgatgtctcatgatgcctgtcctctctccttgcttat 30407130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 25971049 - 25971019
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcga 35  Q
    |||||||||||||||||||||||||||||||    
T  25971049 tctcggggtgccaacctagttgggatgtcga 25971019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 17678341 - 17678300
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    ||||| |||||||||||| |||||||||||||| ||||||||    
T  17678341 tctcgaggtgccaacctaattgggatgtcgatgatgcctctt 17678300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 20386666 - 20386735
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttatat 74  Q
    |||| |||||||||||||||||||||||||| |  | ||| | |||| |||| || ||||||||||||||    
T  20386666 tctcagggtgccaacctagttgggatgtcgacgacgtctcctgatgcctgtcttcactccttgcttatat 20386735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 20434231 - 20434182
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcc 57  Q
    ||||||||||||||||||| ||||||| ||||  | ||||||||||||||    
T  20434231 cggggtgccaacctagttgtgatgtcgttgtttacccttaatgcatgtcc 20434182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 5781135 - 5781064
Alignment:
Q  2 gtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  5781135 gtttctcgggatgccaacctagttgggatgtcgatgttgcctcttaatgtctgtcctccctccttgcttata 5781064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19068750 - 19068677
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttatat 74  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  19068750 ggtttctcagggtgccaacctagtttggatgtcgatgttgcctcttaatgtctgtcctctctcattgcttatat 19068677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 6129748 - 6129680
Alignment:
Q  4 ttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    |||||||||||||||||| ||||||||||||||||||||| |  | |||||| ||||||||||||||||    
T  6129748 ttctcggggtgccaacctggttgggatgtcgatgttgcctttggacgcatgttctctctccttgcttat 6129680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 5784537 - 5784470
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||| ||||||||||||||| ||||||||| |||||||| |||| ||||| ||||||||||||||    
T  5784537 tctcgggatgccaacctagttggaatgtcgatgatgcctcttgatgcctgtccactctccttgcttat 5784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 21711587 - 21711528
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttg 67  Q
    ||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||    
T  21711587 cggggtgccaacctagttgggatgtcggtgttccctcttgatgcttgtcctctctccttg 21711528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 21877953 - 21877886
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||  ||||| ||||||||||||||    
T  21877953 tctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttat 21877886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 34995501 - 34995435
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||||||||||||||||||||||||||||| || ||| | |||| ||||||| |||||||||||    
T  34995501 tctcggggtgccaacctagttgggatgtcgatgatgactcctgatgcctgtcctccctccttgctta 34995435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 35341915 - 35341980
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||||||||||| ||||||||||||||||| || ||||| |||| |||||||||||||||||||    
T  35341915 tctcggggtgccaac-tagttgggatgtcgatgatgactcttgatgcctgtcctctctccttgctta 35341980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 15614766 - 15614822
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcc 64  Q
    ||||||||||||||||||||||||||| |||| |||||| |||| ||||||||||||    
T  15614766 cggggtgccaacctagttgggatgtcggtgttccctcttgatgcttgtcctctctcc 15614822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 31329329 - 31329261
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||| | |||| |||||||| ||||||||| |||||||| |||| |||||||||||||||||||||    
T  31329329 tctcgggataccaatctagttggaatgtcgatgatgcctcttgatgcctgtcctctctccttgcttata 31329261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2259453 - 2259390
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcc 64  Q
    |||||| |||| |||||||||||||||||||||| |||| |||||| |||||||||| ||||||    
T  2259453 ggtttcccgggatgccaacctagttgggatgtcggtgtttcctcttgatgcatgtccactctcc 2259390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 12851845 - 12851785
Alignment:
Q  12 gtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||| |||| |||||||| |||  ||||| ||||||||||||||    
T  12851845 gtgccaacctagttgggatgttgatgatgcctcttgatgtctgtccactctccttgcttat 12851785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 16574380 - 16574448
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||  ||||||||||||||||| || ||| | |||| ||||||||||| |||||||||    
T  16574380 tctcggggtgccaatttagttgggatgtcgatgatgactcctgatgcctgtcctctctcattgcttata 16574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 29998615 - 29998556
Alignment:
Q  13 tgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||| || ||||| |||| |||||||||| ||||||||||    
T  29998615 tgccaacctagttgggatgtcgatgatgtctcttgatgcctgtcctctct-cttgcttata 29998556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 28682809 - 28682768
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  28682809 tctcgggatgccaacctagttgggatgtcgatgatgcctctt 28682768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 39324398 - 39324357
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  39324398 tctcggagtgccaacctagttgggatgtcgatgatgcctctt 39324357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 33764540 - 33764508
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatg 37  Q
    |||||||||||||||||||||||||||||||||    
T  33764540 tctcggggtgccaacctagttgggatgtcgatg 33764508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 13642860 - 13642793
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||| |||| |||||||| ||||||||| |||||| | |||  ||||||||||| ||||||||    
T  13642860 tctcggggtaccaatctagttggaatgtcgatgatgcctcctgatgtctgtcctctctcattgcttat 13642793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 4120550 - 4120604
Alignment:
Q  10 gggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcc 64  Q
    ||||||||||||||||||||||||| |||| |||||| |||  | ||||||||||    
T  4120550 gggtgccaacctagttgggatgtcggtgttccctcttgatgtttatcctctctcc 4120604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28637640 - 28637673
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcg 34  Q
    |||| |||||||||||||||||||||||||||||    
T  28637640 ggttcctcggggtgccaacctagttgggatgtcg 28637673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24765557 - 24765501
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcc 57  Q
    |||||| |||| |||||| ||||||||||||||| | || |||||| ||||||||||    
T  24765557 ggtttcccgggatgccaatctagttgggatgtcggtatttcctcttgatgcatgtcc 24765501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 363 - 291
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||||||||||||| |||||||| | |||||||||||||||| ||||||||||||||| ||||||||||    
T  363 ggtttctcggggtgccaaactagttggtaagtcgatgttgcctcttgatgcatgtcctctcttcttgcttata 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 21246 - 21314
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||||||||    
T  21246 tctcggggtgccaacctagttgggatgtcgatgatgcctcttgatgcctgtccactctccttgcttata 21314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1550 - 1483
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgc 68  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  1550 ggtttcccggggtgccaacctagttgggatgtcggtgttgcctcttgatgcttgtcctctctccttgc 1483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 5e-21; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 21593209 - 21593276
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||    
T  21593209 tctcggggtgccaacctagttggaatgtcgatgatgcctcttgatgcctgtcctctctccttgcttat 21593276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 29840883 - 29840954
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||| ||||| ||||||||    
T  29840883 ggtttctcggggtgccaacctagttgggatgtcgatgttgtttcttgatgcatgtccactctctttgcttat 29840954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 45268891 - 45268820
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||| ||||| | |||||||||||||||| |||| ||||||||||||||||||||    
T  45268891 ggtttctcggggtgccaacctggttggtaagtcgatgttgcctcttgatgcctgtcctctctccttgcttat 45268820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 10568355 - 10568285
Alignment:
Q  2 gtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    |||||||||||||||||||||||||| | |||||||||||||||| |||  ||||||||||||||||||||    
T  10568355 gtttctcggggtgccaacctagttggtaagtcgatgttgcctcttgatgtctgtcctctctccttgcttat 10568285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6001444 - 6001513
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctt 70  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  6001444 ggtttctcgcggtgtcaacctagttggaatgtcgatgttgcctcttaatgtttgtcctctctccttgctt 6001513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17959956 - 17959885
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  17959956 ggtttctcgtggtgcctacctagttaggatgtcgatgttgcctcttaatgcctgtcctctctctttgtttat 17959885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 16890000 - 16890066
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||||||||||||||||||||||||||||| || ||| | |||| |||||||||||||||||||    
T  16890000 tctcggggtgccaacctagttgggatgtcgatgatgactcctgatgcctgtcctctctccttgctta 16890066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 41600747 - 41600808
Alignment:
Q  2 gtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctc 63  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||| |||||    
T  41600747 gtttctcggggtgccaatctagttgggatatcgatgttgcctcttgatgcatgtccactctc 41600808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16290878 - 16290946
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgct 69  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| |||  |||||| ||||||||||    
T  16290878 ggtttcccggggtgccaacctagttgggatgtcggtgttgcctcttgatgtttgtcctttctccttgct 16290946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 23595403 - 23595467
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgct 69  Q
    |||| |||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  23595403 tctcagggtaccaacctagttgggatgtcgatgatgcctcttgatgcgtgtcctctctccttgct 23595467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 23604325 - 23604389
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgct 69  Q
    |||| |||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  23604325 tctcagggtaccaacctagttgggatgtcgatgatgcctcttgatgcgtgtcctctctccttgct 23604389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 26657700 - 26657759
Alignment:
Q  12 gtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    |||||||| |||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  26657700 gtgccaacttagttgggatgtcggtgtttcctcttgatgcatgtcctctctccttgctta 26657759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 14413363 - 14413431
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||| ||||||||||||||||||||||||||| |||| ||| |||  ||||| |||||||||||||||    
T  14413363 tctcgaggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttata 14413431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 17274742 - 17274804
Alignment:
Q  11 ggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||||| ||||||||||||||||||||||||| |||  |||||  ||||||||||||||    
T  17274742 ggtgccaaccaagttgggatgtcgatgttgcctcttgatgtctgtccattctccttgcttata 17274804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26867480 - 26867541
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctct 62  Q
    |||||| || ||||||||||||||||||||||||||| |||||||| | || ||||||||||    
T  26867480 ggtttcccgaggtgccaacctagttgggatgtcgatgatgcctcttgaagcctgtcctctct 26867541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 11620465 - 11620398
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||| ||||||||||||||| | || ||| | ||||||||||| |||||| ||||||    
T  11620465 tctcggggtgccaacatagttgggatgtcgacgatgtctcctgatgcatgtcctttctcctagcttat 11620398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18036872 - 18036809
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcc 64  Q
    |||| |||||||||||||| |||||||||||||| |||| |||||| |||  ||||||||||||    
T  18036872 ggttcctcggggtgccaacatagttgggatgtcggtgtttcctcttgatgtttgtcctctctcc 18036809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17802789 - 17802724
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcctt 66  Q
    ||||||||||| |||||||||||||| ||| || |||||||||||| |||| |||| | |||||||    
T  17802789 ggtttctcgggatgccaacctagttgagatatcaatgttgcctcttgatgcctgtcatttctcctt 17802724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 14335333 - 14335401
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||| |||| ||||||||  |||||||| |||||| | |||| ||||||||||| |||||||||    
T  14335333 tctcggggtaccaatctagttggattgtcgatgatgcctcctgatgcctgtcctctctcgttgcttata 14335401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 24184800 - 24184744
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcc 64  Q
    |||| |||||||||||||||||||||| |||| |||||| |||  ||||||||||||    
T  24184800 cgggatgccaacctagttgggatgtcggtgttccctcttgatgtttgtcctctctcc 24184744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 11837165 - 11837195
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcga 35  Q
    |||||||||||||||||||||||||||||||    
T  11837165 tctcggggtgccaacctagttgggatgtcga 11837195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 22998134 - 22998188
Alignment:
Q  13 tgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttg 67  Q
    ||||||||||||||||||||||||| |||||| | |||| | ||| |||||||||    
T  22998134 tgccaacctagttgggatgtcgatggtgcctcatgatgcctatccactctccttg 22998188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 23124021 - 23124051
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcga 35  Q
    |||||||||||||||||||||||||||||||    
T  23124021 tctcggggtgccaacctagttgggatgtcga 23124051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12236879 - 12236815
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    ||||| |||||||||||||||| ||||||| ||||||||  || || ||||||||| | ||||||    
T  12236879 ggtttatcggggtgccaacctaattgggatatcgatgttttcttttgatgcatgtcatttctcct 12236815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 19742071 - 19742103
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttg 40  Q
    ||||||||||||||||||||||||||| |||||    
T  19742071 cggggtgccaacctagttgggatgtcggtgttg 19742103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 24317428 - 24317484
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcc 64  Q
    |||||||||||||||||||| |||| | |||| |||||| ||| |||| ||||||||    
T  24317428 cggggtgccaacctagttggtatgttggtgtttcctcttgatgtatgttctctctcc 24317484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36728 - 36656
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||| |||||    
T  36728 ggtttctcgaggtaccaacctagttgggatgtcgatgttgcctcttgatgtatgtactctctccttgtttata 36656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14073811 - 14073882
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||| |||||||||||||||||| | |||||||||||||||| |||| |||||||||||||||||||||    
T  14073811 ggtttctcagggtgccaacctagttggtaagtcgatgttgcctcttgatgc-tgtcctctctccttgcttata 14073882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14383839 - 14383910
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||| |||||||||||||||||| | |||||||||||||||| |||| |||||||||||||||||||||    
T  14383839 ggtttctcagggtgccaacctagttggtaagtcgatgttgcctcttgatgc-tgtcctctctccttgcttata 14383910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 28780205 - 28780265
Alignment:
Q  3 tttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctc 63  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28780205 tttcttgggatgccaacctagttgggatgtcgatgttgcctcttgatgcatgtcctctctc 28780265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11295426 - 11295350
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctct----taatgcatgtcctctctccttgcttata 73  Q
    |||||||||| |||||||||||||| |||||||||||||||||||    ||||||| ||||||||||||||||||||    
T  11295426 ggtttctcggagtgccaacctagtttggatgtcgatgttgcctcttaattaatgcacgtcctctctccttgcttata 11295350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3399607 - 3399535
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||| | ||||||||||||| || |||  | |||||||||||||||||||    
T  3399607 ggtttctcggggtgccaacctagttggtaagtcgatgttgccttttgatgtctatcctctctccttgcttata 3399535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1633326 - 1633393
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgc 68  Q
    |||||||||||||| ||||||||||||  ||||| |||| |||||| |||||||||||||||||||||    
T  1633326 ggtttctcggggtgtcaacctagttggattgtcggtgtttcctcttgatgcatgtcctctctccttgc 1633393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9062101 - 9062029
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||| | ||||||| | || |||||||||    
T  9062101 ggtttctcggggtaccaacctagttaggatgtcgatgatgcctcttaaagtatgtcctttgtctttgcttata 9062029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 22849576 - 22849520
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctc 61  Q
    ||||||||||||||||||||||||||||||||| || ||| | ||||||||||||||    
T  22849576 tctcggggtgccaacctagttgggatgtcgatgatgactccttatgcatgtcctctc 22849520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 24573724 - 24573654
Alignment:
Q  3 tttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||| | |||||||||||||||||||||||||||||||| ||   |||||  ||||||||||||||    
T  24573724 tttctcgggctaccaacctagttgggatgtcgatgttgcctcttgatatctgtccattctccttgcttata 24573654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 9114536 - 9114603
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||| |  ||||||| |||| |||  || ||||||||||||    
T  9114536 tctcggggtgccaacctagttgggatgtcgacgacgcctcttgatgcctgttttcactccttgcttat 9114603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12163417 - 12163467
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgc 51  Q
    |||||| || |||||||||||||||||||||||| ||||||||||| ||||    
T  12163417 ggtttcccgaggtgccaacctagttgggatgtcggtgttgcctcttgatgc 12163467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 12727827 - 12727868
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  12727827 tctcgggatgccaacctagttgggatgtcgatgatgcctctt 12727868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 1748351 - 1748292
Alignment:
Q  13 tgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||| ||| |||| || | |||| |||||||||| ||||    
T  1748351 tgccaacctagttgggatgtcgatgatgcttcttgattcctgtcttctctccttgtttat 1748292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 9409144 - 9409089
Alignment:
Q  17 aacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||| |||||||||||||||||||| |||  ||||| ||||||||| ||||    
T  9409144 aacctagttaggatgtcgatgttgcctcttgatgtctgtccactctccttgtttat 9409089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 3410386 - 3410456
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctct-taatgcatgtcctctctccttgcttatat 74  Q
    ||||||| |||||| |||||||||||||||||| || || | |||||| ||| || |||||||||||||||    
T  3410386 tctcgggatgccaatctagttgggatgtcgatgatgtctgtataatgcctgttctttctccttgcttatat 3410456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 20936864 - 20936834
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcga 35  Q
    |||||||||||||||||||||||||||||||    
T  20936864 tctcggggtgccaacctagttgggatgtcga 20936834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 980952 - 981005
Alignment:
Q  12 gtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    |||||||||||||||||||||||  | |||||||| |||  |||||||||||||    
T  980952 gtgccaacctagttgggatgtcggagctgcctcttgatgtttgtcctctctcct 981005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 2040128 - 2040063
Alignment:
Q  7 tcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||| |||||||||||||||||||||| || | |||||| ||| ||||||| |||| | ||||||    
T  2040128 tcgggatgccaacctagttgggatgtcggtgctacctcttcatgtatgtcctttctcttggcttat 2040063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 25150940 - 25150891
Alignment:
Q  11 ggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctct 60  Q
    ||||||||| |||||||||| || |||||| |||||||||||||| ||||    
T  25150940 ggtgccaacttagttgggatatcaatgttgtctcttaatgcatgttctct 25150891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 37375031 - 37375064
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcg 34  Q
    |||| |||||||||||||||||||||||||||||    
T  37375031 ggttcctcggggtgccaacctagttgggatgtcg 37375064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 3997209 - 3997173
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctc 44  Q
    |||| |||||||||||||||||||||| |||||||||    
T  3997209 cgggatgccaacctagttgggatgtcggtgttgcctc 3997173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 18270348 - 18270316
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatg 37  Q
    ||||||||||||||| |||||||||||||||||    
T  18270348 tctcggggtgccaacttagttgggatgtcgatg 18270316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 20617894 - 20617922
Alignment:
Q  9 ggggtgccaacctagttgggatgtcgatg 37  Q
    |||||||||||||||||||||||||||||    
T  20617894 ggggtgccaacctagttgggatgtcgatg 20617922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 3e-19; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33040630 - 33040558
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| || ||||| | ||||| |||||||||    
T  33040630 ggtttctcggggtgccaacctagttgggatgtcgatgttgtctcttgatacatgttcactctctttgcttata 33040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8667153 - 8667083
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||    
T  8667153 ggtttctcggggt-ccaacctagttaggatgtcgatgttgcctcttgatgcctgtccactctccttgcttat 8667083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39406873 - 39406806
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgc 68  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| |||| | ||||| ||||||||    
T  39406873 ggtttctcggggtgccaacctagttggtaagtcgatgttgcctcttgatgcctatcctcactccttgc 39406806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 18234268 - 18234334
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||||||||||||||||||| ||||||||| || ||| | |||| |||||||||||||||||||    
T  18234268 tctcggggtgccaacctagttggaatgtcgatgatgactcctcatgcctgtcctctctccttgctta 18234334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 34512089 - 34512146
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    |||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||||    
T  34512089 cggggtgccaacctagttgggatgtcgatgatgcctcttgatgcctgtccactctcct 34512146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 44673724 - 44673660
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||||||||||| |||  | |||  |||||||||||||    
T  44673724 cggggtgccaacctagttgggatgtcgatgttgcctcttgatgtctatccattctccttgcttat 44673660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 37005950 - 37005893
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcct 65  Q
    ||||||||||||||| ||||||||||| || | |||||| ||||||||||||||||||    
T  37005950 cggggtgccaacctaattgggatgtcggtgcttcctcttgatgcatgtcctctctcct 37005893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 11485249 - 11485197
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcc 57  Q
    ||||||||||||||||||||||||||||||| | | |||||| ||||||||||    
T  11485249 tctcggggtgccaacctagttgggatgtcgaagatacctcttgatgcatgtcc 11485197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 20380266 - 20380198
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||||  |||||||||||||||| ||||| |||||||| |||  ||| |||||||||||||||||    
T  20380266 tctcggggtttcaacctagttgggatgccgatgatgcctcttgatgtctgttctctctccttgcttata 20380198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 34657962 - 34657915
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgt 55  Q
    ||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  34657962 cggggtgccaacctagttgggatgtcggtgtttcctcttgatgcatgt 34657915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4936047 - 4936092
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||    
T  4936047 ggtttcgcggggtgccaacttagttgggatgtcgatgtttcctctt 4936092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 7190100 - 7190141
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    ||||| ||||||||||||||||||||||||||| ||||||||    
T  7190100 tctcgaggtgccaacctagttgggatgtcgatgatgcctctt 7190141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 1924706 - 1924674
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatg 37  Q
    |||||||||||||||||||||||||||||||||    
T  1924706 tctcggggtgccaacctagttgggatgtcgatg 1924674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 19904661 - 19904597
Alignment:
Q  9 ggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||||| || ||||| ||||   ||| ||||||||| |||||    
T  19904661 ggggtgccaacctagttgggatgtcgatgatgtctcttgatgcccttccactctccttgtttata 19904597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 44453129 - 44453093
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctc 44  Q
    ||||||||||||||||||||||||||||||| |||||    
T  44453129 cggggtgccaacctagttgggatgtcgatgtggcctc 44453093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 17941048 - 17941111
Alignment:
Q  10 gggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||| |||| |||||||| ||||||||| ||||||   |||| |||||||||||||||||||||    
T  17941048 gggtaccaatctagttggaatgtcgatgatgcctcccgatgcctgtcctctctccttgcttata 17941111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 21424840 - 21424777
Alignment:
Q  10 gggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||| ||||| |||||||||| |||||| |||||| | |||| | |||||||||||||||||||    
T  21424840 gggtaccaacttagttgggatatcgatgatgcctcctgatgcctatcctctctccttgcttata 21424777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 11416022 - 11415964
Alignment:
Q  10 gggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgc 68  Q
    |||||||||| |||||||||||||| |||| ||| || |||  ||||||||||||||||    
T  11416022 gggtgccaacttagttgggatgtcggtgtttccttttgatgtttgtcctctctccttgc 11415964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 18025454 - 18025424
Alignment:
Q  7 tcggggtgccaacctagttgggatgtcgatg 37  Q
    |||||||||||||||||||||||||||||||    
T  18025454 tcggggtgccaacctagttgggatgtcgatg 18025424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 6192611 - 6192643
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatg 37  Q
    ||||| |||||||||||||||||||||||||||    
T  6192611 tctcgaggtgccaacctagttgggatgtcgatg 6192643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0437 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0437
Description:

Target: scaffold0437; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 14382 - 14315
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||  ||||||||||||||||||||    
T  14382 tctcgggatgccaacctagttgggatgtcgatgatgcctcttgatgtctgtcctctctccttgcttat 14315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0437; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 11443 - 11499
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctcc 64  Q
    ||||||||||||||||||||||||||| |||| |||||| |||  ||||||||||||    
T  11443 cggggtgccaacctagttgggatgtcggtgttccctcttgatgtttgtcctctctcc 11499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 103730 - 103801
Alignment:
Q  3 tttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttatat 74  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||   ||||  |||||||||||||||    
T  103730 tttctcggggtgccaacctagttgggatgtcgatgttgcctcttgatgtcggtccattctccttgcttatat 103801  T

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Target: scaffold0012; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 55826 - 55761
Alignment:
Q  7 tcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||  ||||| ||||||||||||||    
T  55826 tcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtctgtccactctccttgcttat 55761  T

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Target: scaffold0134 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 2507 - 2574
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||| | || ||| | ||||||||||| |||||||||||||    
T  2507 tctcggggtgccaacctagttgggatgtcgacgatgtctcctgatgcatgtcctttctccttgcttat 2574  T

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Target: scaffold0068 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 2323 - 2382
Alignment:
Q  8 cggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttg 67  Q
    ||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||    
T  2323 cggggtgccaacctagttgggatgtcggtgttccctcttgatgcttgtcctctctccttg 2382  T

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Target: scaffold0886 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2804 - 2865
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctct 62  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| ||| |||| ||||||    
T  2804 ggtttctcgaggtaccaacctagttgggatgtcgatgttgcctcttgatgtatgttctctct 2865  T

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Target: scaffold0363 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 5348 - 5280
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||| ||||||||||||||||||||||||||| |||| ||| |||  ||||| |||||||||||||||    
T  5348 tctcgaggtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttata 5280  T

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Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 173894 - 173962
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||||||||| || ||| | |||  ||||||||| |||||||||||    
T  173894 tctcggggtgccaacctagttgggatgtcgatgatgtctcctgatgtctgtcctctcgccttgcttata 173962  T

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Target: scaffold1821 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1821
Description:

Target: scaffold1821; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 1006 - 1073
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||| | || ||| | ||||| ||||| |||||||||||||    
T  1006 tctcggggtgccaacctagttgggatgtcgacgatgtctcctgatgcacgtcctttctccttgcttat 1073  T

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Target: scaffold0093 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 16050 - 16117
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    |||||| |||||||||||||||||||||||||| |||| ||| |||  ||||| ||||||||||||||    
T  16050 tctcggagtgccaacctagttgggatgtcgatgatgccgcttgatgtttgtccactctccttgcttat 16117  T

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Target: scaffold0196 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 786 - 856
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| |||  |||| | |||| |||||||    
T  786 ggtttttcggggtgccaacctagttgggatgtcggtgttgcctcttgatgtctgtcatttctcgttgctta 856  T

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Target: scaffold0314 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 582 - 635
Alignment:
Q  20 ctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||| ||||||    
T  582 ctagttggaatgtcgatgatgcctcttgatgcatgtcctctctccttacttata 635  T

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Target: scaffold0216 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 15129 - 15069
Alignment:
Q  13 tgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    |||||||||||||||||||||  || ||||||| ||||  |||||||||||||||||||||    
T  15129 tgccaacctagttgggatgtcattgatgcctctgaatgtctgtcctctctccttgcttata 15069  T

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Target: scaffold0029 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 129447 - 129515
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||||||||| || ||||| |||  | ||| |||||| ||||||||    
T  129447 tctcggggtgccaacctagttgggatgtcgatgatgactcttgatgtttttccactctccgtgcttata 129515  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 307264 - 307332
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttata 73  Q
    ||||||||||||||||||||||||||||||||| || ||||| |||  | ||| |||||| ||||||||    
T  307264 tctcggggtgccaacctagttgggatgtcgatgatgactcttgatgtttttccactctccgtgcttata 307332  T

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Target: scaffold0546 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 5923 - 5856
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||| |  ||||||| ||||||||  || ||||| ||||||    
T  5923 tctcggggtgccaacctagttgggatgtcgacgacgcctcttgatgcatgttttcactcctagcttat 5856  T

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Target: scaffold0109 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 7384 - 7451
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgcttat 72  Q
    ||||||||||||||||||||||||||||||| |  ||||||| ||||||||  || ||||| ||||||    
T  7384 tctcggggtgccaacctagttgggatgtcgacgacgcctcttgatgcatgttttcactcctagcttat 7451  T

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Target: scaffold0265 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 19620 - 19554
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcctctctccttgctta 71  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||  | ||| | |||||||||||    
T  19620 tctcggggtgccaacctagttgggatgtcgatgatgccgcttgatgtttttccacactccttgctta 19554  T

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Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 21926 - 21885
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  21926 tctcgggatgccaacctagttgggatgtcgatgatgcctctt 21885  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 123897 - 123856
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatgttgcctctt 46  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  123897 tctcggggtgccaacctagttgggatgtcgatgatgtctctt 123856  T

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Target: scaffold0125 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 35562 - 35530
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatg 37  Q
    |||||||||||||||||||||||||||||||||    
T  35562 tctcggggtgccaacctagttgggatgtcgatg 35530  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 20724 - 20692
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatg 37  Q
    |||||||||||||||||||||||||||||||||    
T  20724 tctcggggtgccaacctagttgggatgtcgatg 20692  T

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Target: scaffold0553 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 7551 - 7519
Alignment:
Q  5 tctcggggtgccaacctagttgggatgtcgatg 37  Q
    |||||||||||||||||||||||||||| ||||    
T  7551 tctcggggtgccaacctagttgggatgtagatg 7519  T

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Target: scaffold0356 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 13748 - 13780
Alignment:
Q  2 gtttctcggggtgccaacctagttgggatgtcg 34  Q
    ||||| |||||||||||||||||||||||||||    
T  13748 gtttcccggggtgccaacctagttgggatgtcg 13780  T

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Target: scaffold0166 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8054 - 7998
Alignment:
Q  1 ggtttctcggggtgccaacctagttgggatgtcgatgttgcctcttaatgcatgtcc 57  Q
    |||||| |||| |||||| ||||||||||||||| | || |||||| ||||||||||    
T  8054 ggtttcccgggatgccaatctagttgggatgtcggtatttcctcttgatgcatgtcc 7998  T

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