View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0781_low_36 (Length: 206)
Name: NF0781_low_36
Description: NF0781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0781_low_36 |
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Alignment Details
Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 18030062 - 18029962
Alignment:
| Q |
8 |
ttggtttaataattgaaggacaaatttgatgagagaatgatatttgggactaaattgaaagtttattcaaatctaaaacaagcattaaagtttggaaata |
107 |
Q |
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| T |
18030062 |
ttggtttgataattaaaggactaaattgatgagagaatgatatttgggactaaattgaaagtttattcaaatctaaaacaagcattaaagtttggaaata |
18029963 |
T |
|
| Q |
108 |
a |
108 |
Q |
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| T |
18029962 |
a |
18029962 |
T |
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