View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0783-Insertion-7 (Length: 583)
Name: NF0783-Insertion-7
Description: NF0783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0783-Insertion-7 |
 | |
|
| [»] chr3 (22 HSPs) |
| |
|
| [»] scaffold0083 (1 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 465; Significance: 0; HSPs: 22)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 465; E-Value: 0
Query Start/End: Original strand, 8 - 583
Target Start/End: Original strand, 10373598 - 10374176
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
10373598 |
cacttgagggaaatgcagtgagagaagaaagagaatcgagttccaagtgtgtaagacaagtgcttctcagaatcaattttggaacagctaataacttaac |
10373697 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcac---caagcccatagatattcannnnn |
204 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| |||||||| |
|
|
| T |
10373698 |
acattcacgaataactacttcttgcatcatacacggagaatcactctcaagcaatgacagttgggaactttcactctcaagcccattgatattcatttct |
10373797 |
T |
|
| Q |
205 |
nnnattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaat |
304 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10373798 |
tttattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaatttcttctatggaaggaaggttggtgggcaaat |
10373897 |
T |
|
| Q |
305 |
atccccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcat |
404 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10373898 |
gtccccttagttctggacaattacgtaactctatagccttaagtcgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcat |
10373997 |
T |
|
| Q |
405 |
gttgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctcc |
504 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10373998 |
gttgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatcttggcataatagaactccgggccaattgtctcc |
10374097 |
T |
|
| Q |
505 |
aacatctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10374098 |
aacatctccataccacgtatttctatgtccttgagagaaggtaactgccctagggatggaagtgtcacacaattttcac |
10374176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 8 - 583
Target Start/End: Complemental strand, 9841171 - 9840599
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
9841171 |
cacttgagggaaatgcagtgagagaagaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggaacaactaatagtttaac |
9841072 |
T |
|
| Q |
108 |
ac-cttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnn |
206 |
Q |
| |
|
|| ||| ||| | ||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
9841071 |
acacttttcaa-tcactacatcttgcatcatacatggagaatcactctcaagcaatgacaattgggaactttcaccaagcccattgatattcattttttt |
9840973 |
T |
|
| Q |
207 |
nattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatat |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9840972 |
tattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatat |
9840873 |
T |
|
| Q |
307 |
ccccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgt |
406 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9840872 |
ccccttagttctggacaattgcgtaactctatagccttaagttgaggaaaagca---tttatgccttcaaagggaatccattcattccaattgagcatgt |
9840776 |
T |
|
| Q |
407 |
tgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaa |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9840775 |
tgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaa |
9840676 |
T |
|
| Q |
507 |
catctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9840675 |
catctccataccacgtatttctacgtccttgagagaaggtaactgccctagggatggaagtgtcacacaattttcac |
9840599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 8 - 583
Target Start/End: Complemental strand, 9852052 - 9851477
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||| ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| |||||| |
|
|
| T |
9852052 |
cacttgatggaaatgcattgagagaagaaagtgaatcgagtctcaagtgtgtaagacaagtgcttctcataatcaattttggcacagctaatagcttaac |
9851953 |
T |
|
| Q |
108 |
ac-cttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnn |
206 |
Q |
| |
|
|| ||| ||| | |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
9851952 |
acacttttcaa-tctctacatcttgcatcatacacggagaatcactctcaagcaatgacaattgggaactttcaccaagcccattgatattcattttttt |
9851854 |
T |
|
| Q |
207 |
nattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatat |
306 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9851853 |
tattgaagacaaccaacgcagagtagatggtgtttccaatagatgagaacaacctgatattacaatttcttctatggaaggaaggttggtgggcaaatat |
9851754 |
T |
|
| Q |
307 |
ccccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgt |
406 |
Q |
| |
|
|||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9851753 |
ccccttagttttggacaatcacgtaactctattgccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgt |
9851654 |
T |
|
| Q |
407 |
tgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaa |
506 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9851653 |
tgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccaggccaattgtctccaa |
9851554 |
T |
|
| Q |
507 |
catctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9851553 |
catctccataccacgtatttctatgtccttgagagaaggtaactgccctagggatggaagtgtcacacaattttcac |
9851477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 8 - 583
Target Start/End: Complemental strand, 10519798 - 10519223
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||| |||||| |
|
|
| T |
10519798 |
cacttgagggaaatgcagtgagagaagaaagagaatcgagtcccaagtgtgtaagacaagtgcttttcagaatcaattttggcacagctaatagcttaac |
10519699 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnnn |
207 |
Q |
| |
|
|| | ||| |||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
10519698 |
acactttttaatctctacatcttgcatcatacaaggagaatcactctcaagcaatgacaattgggaactttcaccaagcccattgatattcatttttttt |
10519599 |
T |
|
| Q |
208 |
attgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatatc |
307 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
10519598 |
attgaagacaaccaatgcaaagtagatggtgtttccaatagatgaacacaaccttttattacaatttcttctatggaaggaaggttggtgggcaaatgtc |
10519499 |
T |
|
| Q |
308 |
cccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgtt |
407 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10519498 |
cccttagttctggacaattacgtaactttatagccttaagttgaggaaaagcaaattttatgccttcgaagggaatccattcattccaattgagcatgtt |
10519399 |
T |
|
| Q |
408 |
gtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaac |
507 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10519398 |
gtcgaacattatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaac |
10519299 |
T |
|
| Q |
508 |
atctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10519298 |
atctccataccacatatttctaggtccttgagagaaggtaactgccctagggatggaagtgtcacacaattttcac |
10519223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 8 - 583
Target Start/End: Complemental strand, 10129238 - 10128663
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||| |
|
|
| T |
10129238 |
cacttgagggaaatgcagtgagagaagaaagagaatagagtctcaagtgtgtaagacaagtgcttttcagaatcaattttggcacagctaatagcttaga |
10129139 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnnn |
207 |
Q |
| |
|
|| | ||| |||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
10129138 |
acagttgtgaatcgctacatgttgcatcatacacggagaatcactctcaagcaatgacaattgggaactttcaccaagcccattgatattcatttttttt |
10129039 |
T |
|
| Q |
208 |
attgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatatc |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
10129038 |
attgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaatttcttctatggaaggaaggttggtgggcaaatgtc |
10128939 |
T |
|
| Q |
308 |
cccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgtt |
407 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10128938 |
cccttagttctggacaattccataactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgaccatgtt |
10128839 |
T |
|
| Q |
408 |
gtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaac |
507 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10128838 |
gtcgaactttatatgctcaagggatcggaatggttggaaggaagaattagatcctttttcaatctgggcataatagaactccgggccaattgtctccaac |
10128739 |
T |
|
| Q |
508 |
atctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| || ||||| ||||| |
|
|
| T |
10128738 |
atctccataccacgtatttctatgtccttgagagaaggtaactgccctatgggtggaagtgtcatacaatattcac |
10128663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 8 - 583
Target Start/End: Complemental strand, 10034316 - 10033738
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |||||||||||| ||| ||||| |||| |
|
|
| T |
10034316 |
cacttgagggaaatgcagtgagagaagaaagagaattgagttccaagtgtgtaagacaagtgcttctcaaaatcaattttggcacagctaatagcttaga |
10034217 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcac---caagcccatagatattcannnnn |
204 |
Q |
| |
|
|| | ||| |||| | ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| |||||||| |
|
|
| T |
10034216 |
acagttgtgaatcgctacatgttgcatcatacacggagaatcactctcaagcaatgacagttgggaactttcactctcaagcccattgatattcattttt |
10034117 |
T |
|
| Q |
205 |
nnnattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaat |
304 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10034116 |
tttattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaat |
10034017 |
T |
|
| Q |
305 |
atccccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcat |
404 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10034016 |
gtccccttagttctggacaattatataactctatagccttaagtcgaggaaaagcacattttatgccttcaaagggaatccattcattccaattgaccat |
10033917 |
T |
|
| Q |
405 |
gttgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctcc |
504 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10033916 |
gttgtcgaactttatacgctcaagggatcggaatggttggaaggaagaattagatcctttttcaatctgggcataatagaactccgggccaattgtctcc |
10033817 |
T |
|
| Q |
505 |
aacatctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| || ||||| ||||| |
|
|
| T |
10033816 |
aacatctccataccacgtatttctatgtccttgagagaaggtaactgccctatgggtggaagtgtcatacaatattcac |
10033738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 8 - 583
Target Start/End: Complemental strand, 10263014 - 10262436
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||||||||||| ||||||||| | ||||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
10263014 |
cacttgagggaaatgtagtgagagaaggaagagaactgagtttcaagtgtgttagacaagtgcttctcagaatcaattttggaacagctaataacttaac |
10262915 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnnn |
207 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || ||||||||| |||||| | |
|
|
| T |
10262914 |
acattcacgaataactacttcttgcatcatacacggagaatcactctcaagcaatgacaattgggtccttccatcaagcccatcgatattaattttcttt |
10262815 |
T |
|
| Q |
208 |
attgaagacaaccaatgcagagtagatgg---tgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaat |
304 |
Q |
| |
|
| ||| ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||| | ||||||| |
|
|
| T |
10262814 |
actgacgacaaccaatgcaaagtgtttggctctgtttccaatagatgagaacaaccttttattacaatttcttctatgcaaggaagtttgctaggcaaat |
10262715 |
T |
|
| Q |
305 |
atccccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcat |
404 |
Q |
| |
|
| ||||||||||||||||||| |||||||| ||||| ||||| ||||||||| || ||||||||||||| |||||| ||||||||||||||| ||| |
|
|
| T |
10262714 |
gttcccttagttctggacaattatgtaactccatagctctaagtcgaggaaaagaaagttttatgccttcatagggaagccattcattccaatttggcaa |
10262615 |
T |
|
| Q |
405 |
gttgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctcc |
504 |
Q |
| |
|
| ||| ||| |||||||||||||||||| | |||||||||||||||||| ||| |||||||| ||| |||||||||||||||| |||||||||||| |
|
|
| T |
10262614 |
gctgttgaattttatacgctcaagggattgaaatggttggaaggaagaacaagaaccttcttctccttggacataatagaactccggaccaattgtctcc |
10262515 |
T |
|
| Q |
505 |
aacatctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||| ||| |||||||| |||||||| | |||||||||||||||||||||||| || |||||||| || ||||| ||||| |
|
|
| T |
10262514 |
aacctcttcataccacatatttctaggtccttgagagaaggtaactgccctatgggtggaagtgtcatacaatattcac |
10262436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 8 - 583
Target Start/End: Original strand, 10431797 - 10432375
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |
|
|
| T |
10431797 |
cacttgatggaaatgcagtgagagaagaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggcacaactaatagcttaac |
10431896 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnnn |
207 |
Q |
| |
|
|| | ||| ||||| | ||||||||||||||||||||||||||||||||||| ||| | || ||| | ||||||||| |||||| | |
|
|
| T |
10431897 |
acagttttcaatcactacatgttgcatcatacacggagaatcactctcaagcaatgacaaattggtccttccgtcaagcccattgatattaactttcttt |
10431996 |
T |
|
| Q |
208 |
attgaagacaaccaatgcagagtagatgg---tgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaat |
304 |
Q |
| |
|
||||| ||||||||||||| ||| ||| |||||||| ||| ||||||||||||||||| |||||| ||||||| ||||||||||| | ||||| | |
|
|
| T |
10431997 |
attgacgacaaccaatgcatagtgtttggctctgtttccagtagttgagaacaacctgatatatcaatttcttctatgcaaggaaggttgctaggcaatt |
10432096 |
T |
|
| Q |
305 |
atccccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcat |
404 |
Q |
| |
|
|||||||||||| |||||||| |||||||| ||| | ||||| |||||||||||| |||||||||||||||||| | ||||||||||||||| |||| |
|
|
| T |
10432097 |
gtccccttagttcaggacaattatgtaactccataactctaagtcgaggaaaagcaacttttatgccttcaaagggcagccattcattccaatttggcat |
10432196 |
T |
|
| Q |
405 |
gttgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctcc |
504 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||| ||||||||||||| || ||||| ||||||||| || |||||||||| | ||||||||||||| |
|
|
| T |
10432197 |
gttgtcgaattttatacgctcaagggatggaaatggtaggaaggaagaattggagccttcatcaatctggacaaaatagaactctgtgccaattgtctcc |
10432296 |
T |
|
| Q |
505 |
aacatctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||||||| |||||||| ||||| || | |||||||||||||||||||||||| || |||||||| |||||||| ||||| |
|
|
| T |
10432297 |
aacatcttcataccacatatttgtaggtccttgagagaaggtaactgccctaagggtggaagtgtcacacaatattcac |
10432375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 8 - 583
Target Start/End: Original strand, 10361557 - 10362132
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||||||||||||||||||||| |||||| | |||||| |||| |||||||||||||||||||||||||||||||||| ||| || | | | || | |
|
|
| T |
10361557 |
cacttgagggaaatgcagtgagagaagaaagattaccgagtcccaagagtgtaagacaagtgcttctcagaatcaattttggcacagatgacagcatagc |
10361656 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnnn |
207 |
Q |
| |
|
| | ||| ||| | | |||||||||||| |||||||| ||| |||| |||| |||||||| ||| || ||||||||| || || | |
|
|
| T |
10361657 |
gcacttttgaatcactgcatgttgcatcatacatggagaatcgctcccaagaaatgacaattgggtccttccatcaagcccatcaatcttaaaatttttt |
10361756 |
T |
|
| Q |
208 |
attgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatatc |
307 |
Q |
| |
|
||||| ||||||||||||| ||| | ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| | ||||||| || |
|
|
| T |
10361757 |
attgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttgtattacaatttcttctatgcaaggaaggttgctcggcaaatgtc |
10361856 |
T |
|
| Q |
308 |
cccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgtt |
407 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10361857 |
cccttagttctggacaattatgtaactccatagctctaagttgaggaaaagcacattttatgccttcaaagggaatccattcattccaatttggcatgtt |
10361956 |
T |
|
| Q |
408 |
gtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaac |
507 |
Q |
| |
|
|||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
10361957 |
gtcgaaatttatgcgctcaagggatggaaatggttggaaggaagaattagaaccatcttcaatctggacataatagaactccaggccaattgtctccaac |
10362056 |
T |
|
| Q |
508 |
atctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
|| | |||||||| ||||| || | |||| ||||||||||||||||||| || ||||||| |||||||| ||||| |
|
|
| T |
10362057 |
atgttcataccacatatttttaggaccttcagagaaggtaactgccctaagggtggaagtatcacacaatattcac |
10362132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 8 - 583
Target Start/End: Complemental strand, 10582924 - 10582348
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| |
|
|
| T |
10582924 |
cacttgagggaaatgtagtgagagaagaaagagaatagagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggcacagctaataggttaac |
10582825 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnnn |
207 |
Q |
| |
|
| | || ||| | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| || || | |
|
|
| T |
10582824 |
gcagtttgccatcactgcatcttgcatcatacacggagaatcactctcaagcaataacaattgggtcctttcaccaagcccatcaatcttaatttttttt |
10582725 |
T |
|
| Q |
208 |
-attgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatat |
306 |
Q |
| |
|
||||| ||||||||||||| ||| | |||||||||||||||| ||||||| |||| |||||| ||||||| ||||||| | | | ||||||| | |
|
|
| T |
10582724 |
tattgacgacaaccaatgcaaagtgggctctgtttccaatagatgaacacaaccttctatttcaatttcttctatgcaaggaagatggctaggcaaatgt |
10582625 |
T |
|
| Q |
307 |
ccccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgt |
406 |
Q |
| |
|
||| |||||| |||||||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| | || | |
|
|
| T |
10582624 |
ccctttagtttgggacaattacgtaacttcatagctcgaagttgaggaaaagcaaattgtatgccttcaaagggaagccatttattccaatttggtatat |
10582525 |
T |
|
| Q |
407 |
tgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaa |
506 |
Q |
| |
|
||||||| |||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
10582524 |
tgtcgaattttatatactcaagggatggaaatggttggaaggaagaattagaaccttcttcaatctggacataatagaactccaggccaattgtctccaa |
10582425 |
T |
|
| Q |
507 |
catctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
|||||||||||||| |||||||| | |||| ||||||||||||||||||| | |||||||| |||||||| ||||| |
|
|
| T |
10582424 |
catctccataccacatatttctaggtccttaagagaaggtaactgccctattggtggaagtgtcacacaatattcac |
10582348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 8 - 583
Target Start/End: Complemental strand, 10197989 - 10197411
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
|||||||||| ||||| | || |||||||||||||| |||| |||||||| ||||||||||||||| |||||| |||||| | | ||||| |||| | |
|
|
| T |
10197989 |
cacttgagggtaatgcggcgatagatgaaagagaatagagtttcaagtgttgaagacaagtgcttcttggaatcatttttggcatagctaatagcttagc |
10197890 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnnn |
207 |
Q |
| |
|
|| | | ||| ||||| |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| |||||| | |
|
|
| T |
10197889 |
acactttcgaatcactacatcttccatcatacacggagaatcactctcaagcaatgacaattgggtcctttcaccaaacccatcgatattaattttcttt |
10197790 |
T |
|
| Q |
208 |
attgaagacaaccaatgcagagtagatgg---tgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaat |
304 |
Q |
| |
|
| ||| ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||| || |||| ||||||||||| | ||||||| |
|
|
| T |
10197789 |
actgacgacaaccaatgcaaagtgtttggctctgtttccaatagatgagaacaaccttttattacaatttcttttatgcaaggaaggttgctaggcaaat |
10197690 |
T |
|
| Q |
305 |
atccccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcat |
404 |
Q |
| |
|
||||||||||||| ||||||| ||||||| ||||| ||||| |||||||||||||||||||||||||| |||||| ||||||||||||||| |||| |
|
|
| T |
10197689 |
gtccccttagttctcgacaattacgtaactccatagctctaagtcgaggaaaagcaaattttatgccttcatagggaagccattcattccaatttggcat |
10197590 |
T |
|
| Q |
405 |
gttgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctcc |
504 |
Q |
| |
|
||||||||| |||||||||||||||| ||| ||||| |||||||||||| ||| |||||||| |||| |||||||||||||||| |||||||||||| |
|
|
| T |
10197589 |
gttgtcgaattttatacgctcaagggttggaaatggctggaaggaagaacaagaaccttcttctccctggacataatagaactccggaccaattgtctcc |
10197490 |
T |
|
| Q |
505 |
aacatctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||||| | |||||||| ||||| || | |||||||||||||||| || |||| || |||||||| |||||||| ||||| |
|
|
| T |
10197489 |
aacatgttcataccacatatttttaggtccttgagagaaggtaattgacctatgggtggaagtgtcacacaatattcac |
10197411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 583
Target Start/End: Original strand, 11779738 - 11780313
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||| |||| | ||| || | | |
|
|
| T |
11779738 |
cacttgagggaaatgcagtgagagaagaaagagaatggagtctcaagtatgtaagacaaatgcttctcaaaatcaattttggcacaactgatagctcagc |
11779837 |
T |
|
| Q |
108 |
ac-cttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnn |
206 |
Q |
| |
|
|| ||| ||| | ||||| | |||||||||| | |||||||||| |||||||||| |||||| | |||||||||| || | |||||||| |
|
|
| T |
11779838 |
acacttttcaa-tcactacatgttgcatcatagatagagaatcactatcaagcaatgacaattgtgtcttttcaccaagtcctttgatattcatttcttt |
11779936 |
T |
|
| Q |
207 |
nattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatat |
306 |
Q |
| |
|
||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||| ||||||| | |
|
|
| T |
11779937 |
tattgacgacaaccaatgcaaagtagatggtttttccaatagatgagaacaaccttttattacaatttcttcgatgcaaggaaggttggtaggcaaatgt |
11780036 |
T |
|
| Q |
307 |
ccccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgt |
406 |
Q |
| |
|
||||||||||| |||||||| | ||||| |||| || ||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
11780037 |
ccccttagttcaggacaattacgcaactccatagttttgagtcgaggaaatgcaaattttataccttcaaagggaaaccattcattccaatttggcatgt |
11780136 |
T |
|
| Q |
407 |
tgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaa |
506 |
Q |
| |
|
|||| || |||||| |||| |||||||| |||||||||||||||||||| || ||| |||| |||| |||||||||||| || | |||||| ||||| |
|
|
| T |
11780137 |
tgtcaaattttataagctcgagggatggaaatggttggaaggaagaattggaacctacttctccctggacataatagaacttcgaacaaattgtatccaa |
11780236 |
T |
|
| Q |
507 |
catctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
|||| |||||||| |||||||| ||||||||||||||| |||||||| || |||||||| |||||||| ||||| |
|
|
| T |
11780237 |
catcatcataccacatatttctaactccttgagagaaggtagctgccctatgggtggaagtgtcacacaatattcac |
11780313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 8 - 583
Target Start/End: Complemental strand, 10091107 - 10090528
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
|||||||||| ||||| | || |||||||||||||| |||| |||||||| ||||||||||||||| |||||| |||||| | | ||||| |||| | |
|
|
| T |
10091107 |
cacttgagggtaatgcggcgatagatgaaagagaatagagtttcaagtgttgaagacaagtgcttcttggaatcatttttggcatagctaatagcttagc |
10091008 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnnn |
207 |
Q |
| |
|
|| | | ||| ||||| |||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||| ||||| |||||| | |
|
|
| T |
10091007 |
acactttcgaatcactacatcttccatcatacatggagaatcactctcaagcaatgacaattgggtcctttcaccaaacccatcgatattaattttcttt |
10090908 |
T |
|
| Q |
208 |
attgaagacaaccaatgcagagtagatgg---tgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaat |
304 |
Q |
| |
|
| ||| ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||| || |||| ||||||||||| | ||||||| |
|
|
| T |
10090907 |
actgacgacaaccaatgcaaagtgtttggctctgtttccaatagatgagaacaaccttttattacaatttcttttatgcaaggaaggttgctaggcaaat |
10090808 |
T |
|
| Q |
305 |
atccccttagttctggacaatt--gtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagc |
402 |
Q |
| |
|
||||||||||||| ||||||| ||||| ||| ||||| ||||| |||||||||||||||||||||||||| |||||| ||||||||||||||| || |
|
|
| T |
10090807 |
gtccccttagttctcgacaattacgtgta-ctccatagctctaagtcgaggaaaagcaaattttatgccttcatagggaagccattcattccaatttggc |
10090709 |
T |
|
| Q |
403 |
atgttgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtct |
502 |
Q |
| |
|
||||||||||| |||||||||||||||| ||| ||||| |||||||||||| ||| |||||||| |||| |||||||||||||||| |||||||||| |
|
|
| T |
10090708 |
atgttgtcgaattttatacgctcaagggttggaaatggctggaaggaagaacaagaaccttcttctccctggacataatagaactccggaccaattgtct |
10090609 |
T |
|
| Q |
503 |
ccaacatctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||||||| | |||||||| ||||| || | |||||||||||||||| || |||| || |||||||| |||||||| ||||| |
|
|
| T |
10090608 |
ccaacatgttcataccacatatttttaggtccttgagagaaggtaattgacctatgggtggaagtgtcacacaatattcac |
10090528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 8 - 583
Target Start/End: Complemental strand, 11771547 - 11770972
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||| |||| | ||| || ||| |
|
|
| T |
11771547 |
cacttgggggaaatgcagtgagagaagaaagagaatggagtctcaagtatgtaagacaagtgcttctcaaaatcaattttggcacaactgatagctcaac |
11771448 |
T |
|
| Q |
108 |
ac-cttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnn |
206 |
Q |
| |
|
| ||| ||| | ||||| | |||||||||| | |||||||||| |||||||||| ||| || | |||||||||| || | |||||||| |
|
|
| T |
11771447 |
atacttttcaa-tcactacatgttgcatcatagatagagaatcactatcaagcaatgacaactgtgtcttttcaccaaggccgttgatattcatttcttt |
11771349 |
T |
|
| Q |
207 |
nattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatat |
306 |
Q |
| |
|
||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||| || |||| | |
|
|
| T |
11771348 |
tattgacgacaaccaatgcaaagtagatggtttttccaatagatgagaacaacctttgattacaatttcttcgatgcaaggaaggttggtaggaaaatgt |
11771249 |
T |
|
| Q |
307 |
ccccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgt |
406 |
Q |
| |
|
|||||||||| |||||||| | ||||| |||| || ||| ||||||||||||||||||| |||||||| |||| ||||||||||||||| |||||| |
|
|
| T |
11771248 |
acccttagttcaggacaattacgcaactccatagttttgagtcgaggaaaagcaaattttataccttcaaaaggaagccattcattccaatttggcatgt |
11771149 |
T |
|
| Q |
407 |
tgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaa |
506 |
Q |
| |
|
|||| || |||||| |||| |||||||| |||||||||||||||||||| || ||| |||| |||| |||||||||||| || | |||||| ||||| |
|
|
| T |
11771148 |
tgtcaaattttataagctcgagggatggaaatggttggaaggaagaattggaacctacttctccctggacataatagaacttcgaacaaattgtatccaa |
11771049 |
T |
|
| Q |
507 |
catctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||| |||||||| |||||||| ||||||||||||||| |||||||| || |||||||| |||||||| ||||| |
|
|
| T |
11771048 |
tatcatcataccacatatttctagctccttgagagaaggtagctgccctatgggtggaagtgtcacacaatattcac |
11770972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 269 - 583
Target Start/End: Complemental strand, 10665578 - 10665264
Alignment:
| Q |
269 |
caattttttctatggaaggaaggttggtgggcaaatatccccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttat |
368 |
Q |
| |
|
|||||| |||||| ||||||| | | | ||||||| |||| |||||| ||||||||| ||||||| || || ||||| ||||||||||||||||||| |
|
|
| T |
10665578 |
caatttcttctatacaaggaagatggctaggcaaatgtccctttagttttggacaattacgtaactccatggctctaagtcgaggaaaagcaaattttat |
10665479 |
T |
|
| Q |
369 |
gccttcaaagggaatccattcattccaattgagcatgttgtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttca |
468 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||||||| |||||||||||||||||| | || ||||| ||| |
|
|
| T |
10665478 |
gccttcaaagggaatccattcattccaatttggtatgttgtcgaattttatacactcaagggatggaaatggttggaaggaagaacttgagccttcctca |
10665379 |
T |
|
| Q |
469 |
atctgggcataatagaactccgggccaattgtctccaacatctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtg |
568 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| | | |||||||| | ||||||||||||||||| ||| |||| ||||||| |
|
|
| T |
10665378 |
atctggacataatagaactccgggccaattgtctccaacatctccatgtcgcatatttctaggttcttgagagaaggtaacttcccaaggggtggaagta |
10665279 |
T |
|
| Q |
569 |
ccacacaattttcac |
583 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
10665278 |
tcacacaatattcac |
10665264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 216 - 583
Target Start/End: Complemental strand, 10079515 - 10079148
Alignment:
| Q |
216 |
caaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatatccccttagt |
315 |
Q |
| |
|
|||||||| || ||||| ||||||||||||||||| | ||||||| ||| | ||||| ||||||| ||||||||| | | || |||| ||| ||||| |
|
|
| T |
10079515 |
caaccaatccaaagtaggtggtgtttccaatagattcgcacaaccttttatcataatttcttctatgcaaggaaggtcgctaggaaaatgcccctttagt |
10079416 |
T |
|
| Q |
316 |
tctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgttgtcgaact |
415 |
Q |
| |
|
|| ||||||| | |||||| |||| ||||| |||||||| |||| ||||| ||||||||||||| ||||| ||||||||| ||||||||| || | |
|
|
| T |
10079415 |
tcaggacaatcatctaactccatagttctaagtcgaggaaaaacaaaatttattccttcaaagggaagccattgattccaatttggcatgttgttaaatt |
10079316 |
T |
|
| Q |
416 |
ttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaacatctccat |
515 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| |||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10079315 |
ttatgcgctcaagggatggaaatggttggaagaaagattcagagccttcttcaatctggacataatagaactccgggccaattgtctccaacatcttcat |
10079216 |
T |
|
| Q |
516 |
accacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||| |||||||| | ||||||||||||||| ||||| || | ||||||| |||||||| ||||| |
|
|
| T |
10079215 |
tccaaatatttctaggtccttgagagaaggtagttgcccaagtggtggaagtatcacacaatattcac |
10079148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 216 - 547
Target Start/End: Complemental strand, 10186485 - 10186154
Alignment:
| Q |
216 |
caaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatatccccttagt |
315 |
Q |
| |
|
|||||||| || ||||| |||||| |||||||||| | ||||||| ||| | ||||| ||||||| ||||||||| | ||||||| ||| ||||| |
|
|
| T |
10186485 |
caaccaatccaaagtaggtggtgtatccaatagattcgcacaaccttttatcataatttcttctatgcaaggaaggtcactaggcaaatgcccctttagt |
10186386 |
T |
|
| Q |
316 |
tctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgttgtcgaact |
415 |
Q |
| |
|
|| ||||||| | |||||| |||| ||||| |||||||| |||| ||||| ||||||||||||| ||||| ||||||||| ||||||||| || | |
|
|
| T |
10186385 |
tcaggacaatcatctaactccatagttctaagtcgaggaaaaacaaaatttattccttcaaagggaagccattgattccaatttggcatgttgttaaatt |
10186286 |
T |
|
| Q |
416 |
ttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaacatctccat |
515 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| |||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10186285 |
ttatgcgctcaagggatggaaatggttggaagaaagattcagagccttcttcaatctggacataatagaactccgggccaattgtctccaacatcttcat |
10186186 |
T |
|
| Q |
516 |
accacgtatttctatgcccttgagagaaggta |
547 |
Q |
| |
|
||| |||||||| | ||||||||||||||| |
|
|
| T |
10186185 |
tccaaatatttctaggtccttgagagaaggta |
10186154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 219 - 568
Target Start/End: Complemental strand, 10530749 - 10530400
Alignment:
| Q |
219 |
ccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatatccccttagttct |
318 |
Q |
| |
|
|||||||| |||| |||||||||||||||| ||| ||||||| |||| ||||| ||||||||||| |||| | | || |||| |||||| | |||| |
|
|
| T |
10530749 |
ccaatgcaaagtatgtggtgtttccaatagacgagcacaaccttctatttgaatttcttctatggaagataggtggctaggaaaatgtcccctaaattct |
10530650 |
T |
|
| Q |
319 |
ggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgttgtcgaacttta |
418 |
Q |
| |
|
|||||||| | |||||| | || ||||| ||||||||||| | | |||||||| || | ||||||||||||||| ||||| | | || ||| |
|
|
| T |
10530649 |
ggacaattatataactcaagagttttaagacatggaaaagcaaagctgtttccttcaaaagggagccattcattccaatttggcatgatttgaaatctta |
10530550 |
T |
|
| Q |
419 |
tacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaacatctccatacc |
518 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||| || |||||| | ||| || |||||||||| | ||||||| ||||||| |||| |||| | |
|
|
| T |
10530549 |
tacgctcaagggacggaaatggttggaaggaagaatttgaaccttctccttcttggacacaatagaactctgagccaattctctccaatatcttcatatc |
10530450 |
T |
|
| Q |
519 |
acgtatttctatgcccttgagagaaggtaactgccctagggatggaagtg |
568 |
Q |
| |
|
| ||||| || | |||| |||||||||| ||||||||| | |||||||| |
|
|
| T |
10530449 |
atatatttttaggtcctttagagaaggtagctgccctagcggtggaagtg |
10530400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 51 - 506
Target Start/End: Complemental strand, 10502852 - 10502401
Alignment:
| Q |
51 |
caagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaacaccttcacaaataactacttcttgcatcatacacggagaatca |
150 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| |||||| | | |||||| | |||||| |||||| ||||| | |||||||||||| ||||| ||| |
|
|
| T |
10502852 |
caagtgttgaagacaagtgcttctca-aatcatttttggaatagataatagcgtaacacacctacaaatgactacatgttgcatcatacatggagagtca |
10502754 |
T |
|
| Q |
151 |
ctctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnnnattgaagacaaccaatgcagagtagatggtgtttccaatagat |
250 |
Q |
| |
|
||| ||||||||| ||||| | ||||||||||||||| |||||| | ||| |||| |||||||| ||||| |||||||||||||||| |
|
|
| T |
10502753 |
ctcccaagcaatgataattgagtcttttcaccaagcccattgatattaccttttttcaatgacgacagccaatgcaaagtaggcggtgtttccaatagat |
10502654 |
T |
|
| Q |
251 |
gagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatatccccttagttctggacaattgtgtaactctatagccttaagttg |
350 |
Q |
| |
|
||| ||||||| ||||||||||| ||||||| ||| ||||| | || |||| ||||| | ||| | |||||| ||| || | | ||||| | |
|
|
| T |
10502653 |
gagcacaaccttctattacaatttcttctatgaaagaaaggtggcaaggtaaattccccctcaattcagaacaattaagtatcttcagaattttaagacg |
10502554 |
T |
|
| Q |
351 |
aggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgttgtcgaactttatacgctcaagggatgggaatggttggaaggaa |
450 |
Q |
| |
|
|||||| ||||| || | |||||||||| || |||||| |||||||| |||||||| || |||||| ||||||||| || ||||||||||||||| |
|
|
| T |
10502553 |
aggaaaggcaaaattgtttccttcaaaggaaagccattccttccaatttggcatgttgaaaaatgttatacactcaagggagggaaatggttggaaggaa |
10502454 |
T |
|
| Q |
451 |
gaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaa |
506 |
Q |
| |
|
|||| ||| |||||||| | | || |||||||||| ||||||||| ||||||| |
|
|
| T |
10502453 |
gaatcagaaccttcttcta---cgacacaatagaactctgggccaattttctccaa |
10502401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 10665779 - 10665698
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttgg |
89 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10665779 |
cacttgagggaaatgcagtgagagaagaaagtgaatagagtgccaagtgtgtaagacaagtgcttctcataatcaattttgg |
10665698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 568
Target Start/End: Complemental strand, 10679525 - 10679191
Alignment:
| Q |
234 |
tggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatatccccttagttctggacaattgtgtaac |
333 |
Q |
| |
|
|||||||||||||||| ||| | ||||| |||| ||||| ||||||||||| |||| | |||| |||| || ||| |||||||||||||| | |||| |
|
|
| T |
10679525 |
tggtgtttccaatagacgagcataaccttctatttgaatttcttctatggaagataggtggctgggaaaatgtcgcctaagttctggacaattatataac |
10679426 |
T |
|
| Q |
334 |
tctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgttgtcgaactttatacgctcaagggatg |
433 |
Q |
| |
|
|| | || ||||| ||||||||||| | | |||||||| || | ||||||||||||||| ||||| | | || |||||| ||||||||| | |
|
|
| T |
10679425 |
tcaagagttttaagacatggaaaagcaaagctgtttccttcaaaagggagccattcattccaatttggcatgatttgaaatcttatacactcaagggacg |
10679326 |
T |
|
| Q |
434 |
ggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaacatctccataccacgtatttctatgcc |
533 |
Q |
| |
|
| |||||||||||||||||||| || |||||| | ||| || |||||||||| | ||||||| ||||| | |||| |||| || ||||| || | | |
|
|
| T |
10679325 |
gaaatggttggaaggaagaatttgaaccttctccttcttggacacaatagaactctgagccaattctctccgatatcttcatatcatatatttttaggtc |
10679226 |
T |
|
| Q |
534 |
cttgagagaaggtaactgccctagggatggaagtg |
568 |
Q |
| |
|
||| |||||||||| ||||||||| | |||||||| |
|
|
| T |
10679225 |
ctttagagaaggtagctgccctagcggtggaagtg |
10679191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 13853217 - 13853298
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttgg |
89 |
Q |
| |
|
||||||| |||||| |||||||||||| || | || |||| |||||||| |||| |||||||||||| |||||||||||| |
|
|
| T |
13853217 |
cacttgacggaaatacagtgagagatggaatatcatagagtttcaagtgttgaagaaaagtgcttctcaaaatcaattttgg |
13853298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 400; Significance: 0; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 8 - 583
Target Start/End: Original strand, 55358 - 55933
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||| |
|
|
| T |
55358 |
cacttgagggaaatgcagtgagagaagaaagtgaatggagtttcaagtgtgtaagacaagtgcttttcagaatcaattttggcacagctaatagcttaga |
55457 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnnn |
207 |
Q |
| |
|
|| | ||| |||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
55458 |
acagttgtgaatcgctacatgttgcatcatacacggagaatcactctcaagcaatgacaattgggaactttcaccaagcccattgatattcattattttt |
55557 |
T |
|
| Q |
208 |
attgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatatc |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
55558 |
attgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaatttcttctatggaaggaaggttggtgggcaaatgtc |
55657 |
T |
|
| Q |
308 |
cccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgtt |
407 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
55658 |
cccttagttctggacaatcacgtaactctattgccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgaacatgtt |
55757 |
T |
|
| Q |
408 |
gtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaac |
507 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55758 |
gtcgaactttataaactcaagggataggaatggttggaaggaagaattagatccttattcaatctgggcataatagaactccgggccaattgtctccaac |
55857 |
T |
|
| Q |
508 |
atctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtgccacacaattttcac |
583 |
Q |
| |
|
||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
55858 |
atctccataccacatatttctaagtccttgagagaaggtaactgccctagggatggaagtgtcacacaattttcac |
55933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 173; Significance: 1e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 8 - 568
Target Start/End: Complemental strand, 26909201 - 26908641
Alignment:
| Q |
8 |
cacttgagggaaatgcagtgagagatgaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggtacaaataataacttaac |
107 |
Q |
| |
|
|||||||||| ||||| | || |||||||||||||| |||| |||||||| |||||| ||||||||||||||||||||||| | | ||||| | ||| |
|
|
| T |
26909201 |
cacttgagggtaatgcggcgatagatgaaagagaatagagtttcaagtgttgaagacatgtgcttctcagaatcaattttggcaaacctaatagcccaac |
26909102 |
T |
|
| Q |
108 |
accttcacaaataactacttcttgcatcatacacggagaatcactctcaagcaatggcaattgggaactttcaccaagcccatagatattcannnnnnnn |
207 |
Q |
| |
|
|| | ||| ||||| |||||||||||||| ||||||||||||| |||||||| |||| || |||| ||||||||||| |||||| | |
|
|
| T |
26909101 |
acaattttgaatcactacatcttgcatcatacagggagaatcactcttaagcaatgacaatatggtccttttaccaagcccatggatattaattttcggt |
26909002 |
T |
|
| Q |
208 |
attgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatatc |
307 |
Q |
| |
|
|| || |||| |||||| | ||||||||||||||||||||||||| | |||||| ||||||||||| ||||||| ||||||||||| | |||||| || |
|
|
| T |
26909001 |
atggacgacacccaatgtaaagtagatggtgtttccaatagatgatagcaaccttttattacaatttcttctatgcaaggaaggttgctaggcaaaagtc |
26908902 |
T |
|
| Q |
308 |
cccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgtt |
407 |
Q |
| |
|
| |||||| ||||||||| || ||||| |||| | ||| ||||||||| ||| || || ||||||||||||| ||||| ||||||||| ||||||| |
|
|
| T |
26908901 |
cttttagttttggacaattatgcaactcaatagttctgagtcgaggaaaagaaaaattcattccttcaaagggaagccattgattccaatttggcatgtt |
26908802 |
T |
|
| Q |
408 |
gtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaac |
507 |
Q |
| |
|
|| || |||||||||||||||||| | ||||||||||||||| |||| || ||||| ||||||||| |||||||| | || |||||||||||||||||| |
|
|
| T |
26908801 |
gttaaattttatacgctcaagggattgaaatggttggaaggaaaaattggagccttcctcaatctggacataatagtaatctgggccaattgtctccaac |
26908702 |
T |
|
| Q |
508 |
atctccataccacgtatttctatgcccttgagagaaggtaactgccctagggatggaagtg |
568 |
Q |
| |
|
|| | ||||||| ||||||||| | |||||||| |||||| || ||||||| |||||||| |
|
|
| T |
26908701 |
attttcataccatgtatttctaggtccttgagaaaaggtagttgtcctaggggtggaagtg |
26908641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 208 - 510
Target Start/End: Complemental strand, 11487148 - 11486846
Alignment:
| Q |
208 |
attgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatggaaggaaggttggtgggcaaatatc |
307 |
Q |
| |
|
||||| ||||||||||||| || ||||||||||||||| ||||| | |||||||| ||| ||||||||||||| ||||||||| | | ||||||| || |
|
|
| T |
11487148 |
attgacgacaaccaatgcaaagcagatggtgtttccaaaagatgggcacaacctgttatattaattttttctatgcaaggaaggtggctaggcaaatgtc |
11487049 |
T |
|
| Q |
308 |
cccttagttctggacaattgtgtaactctatagccttaagttgaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgtt |
407 |
Q |
| |
|
||||||| || ||||| | |||||||| | || |||| ||||||||| ||| | |||||||||| |||| |||||| |||||||| ||||||| |
|
|
| T |
11487048 |
cccttagctcatgacaactatgtaactcaagagttctaagacgaggaaaagaaaaaaatttgccttcaaaaggaagccattccttccaattttgcatgtt |
11486949 |
T |
|
| Q |
408 |
gtcgaactttatacgctcaagggatgggaatggttggaaggaagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaac |
507 |
Q |
| |
|
| | || |||||| |||||||||| ||||||||||||||||||||||| ||| | | || | || |||||||||| ||||||||||||||||| |
|
|
| T |
11486948 |
gacaaatgttatacattcaagggatgaaaatggttggaaggaagaattagaagcttttccttccttgacacaatagaactcttggccaattgtctccaac |
11486849 |
T |
|
| Q |
508 |
atc |
510 |
Q |
| |
|
||| |
|
|
| T |
11486848 |
atc |
11486846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 529
Target Start/End: Original strand, 44955775 - 44955954
Alignment:
| Q |
350 |
gaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgttgtcgaacttt-atacgctcaagggatgggaatggttggaagg |
448 |
Q |
| |
|
||||||||||||| || | |||| |||||||||||| || |||||||| ||| |||| ||| ||| ||| |||||||||| |||||||||||||||| |
|
|
| T |
44955775 |
gaggaaaagcaaaattgcttcctttaaagggaatccactccttccaatttgacattttgt-gaagtttgatatgctcaagggacgggaatggttggaagg |
44955873 |
T |
|
| Q |
449 |
aagaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaacatctccataccacgtatttcta |
529 |
Q |
| |
|
| ||||| || |||||| | ||| |||| |||||||||||||| ||| |||||||| ||| ||||||| |||||||| |
|
|
| T |
44955874 |
aggaattggaaccttctcctgcttggacatagtagaactccgggcctattatctccaacttcttcataccatatatttcta |
44955954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 350 - 568
Target Start/End: Original strand, 17851024 - 17851242
Alignment:
| Q |
350 |
gaggaaaagcaaattttatgccttcaaagggaatccattcattccaattgagcatgttgtcgaactttatacgctcaagggatgggaatggttggaagga |
449 |
Q |
| |
|
||||||||||||| || |||||| ||||||||| |||||| |||||||| |||||||| ||| ||| || ||||||||| || |||||||| ||||| |
|
|
| T |
17851024 |
gaggaaaagcaaaattgatgcctacaaagggaagccattccttccaatttggcatgttgcgaaacattaaacactcaagggacggaaatggttgaaagga |
17851123 |
T |
|
| Q |
450 |
agaattagatccttcttcaatctgggcataatagaactccgggccaattgtctccaacatctccataccacgtatttctatgcccttgagagaaggtaac |
549 |
Q |
| |
|
|||||| || |||||| | |||| ||| ||||||||| || || ||| ||||||| ||||||||||||| ||| || | |||| |||||||||| | |
|
|
| T |
17851124 |
agaattggaaccttctcctgcctggacatgatagaactctggaccgattctctccaatatctccataccacaaattagtaggtccttcagagaaggtagc |
17851223 |
T |
|
| Q |
550 |
tgccctagggatggaagtg |
568 |
Q |
| |
|
||||| || | |||||||| |
|
|
| T |
17851224 |
tgccccagcggtggaagtg |
17851242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 4574 times since January 2019
Visitors: 5751