View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0783_low_3 (Length: 479)

Name: NF0783_low_3
Description: NF0783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0783_low_3
NF0783_low_3
[»] chr4 (43 HSPs)
chr4 (1-347)||(6543079-6543434)
chr4 (9-119)||(6737583-6737693)
chr4 (401-479)||(14261044-14261122)
chr4 (401-479)||(21310425-21310503)
chr4 (401-479)||(25704651-25704729)
chr4 (401-479)||(22321466-22321544)
chr4 (401-479)||(24706446-24706524)
chr4 (401-479)||(12071561-12071639)
chr4 (401-479)||(40122684-40122762)
chr4 (129-213)||(6736057-6736141)
chr4 (396-479)||(21661734-21661817)
chr4 (396-479)||(21670498-21670581)
chr4 (401-479)||(34324781-34324860)
chr4 (401-479)||(44568837-44568915)
chr4 (398-479)||(20249211-20249292)
chr4 (408-479)||(50767871-50767942)
chr4 (403-479)||(31892240-31892316)
chr4 (22-82)||(6503166-6503226)
chr4 (124-263)||(6523998-6524137)
chr4 (22-79)||(6506673-6506730)
chr4 (394-429)||(19433351-19433386)
chr4 (401-479)||(1988036-1988113)
chr4 (9-119)||(6594015-6594125)
chr4 (416-454)||(19361662-19361700)
chr4 (397-429)||(55209808-55209840)
chr4 (398-429)||(2760961-2760992)
chr4 (14-173)||(6646090-6646249)
chr4 (15-74)||(6747960-6748019)
chr4 (399-429)||(2760728-2760758)
chr4 (408-442)||(19362189-19362223)
chr4 (393-439)||(20249006-20249052)
chr4 (399-429)||(55209572-55209602)
chr4 (401-429)||(4467520-4467548)
chr4 (399-439)||(12071799-12071839)
chr4 (401-429)||(26169986-26170014)
chr4 (401-429)||(26170221-26170249)
chr4 (401-429)||(29830343-29830371)
chr4 (401-429)||(35381128-35381156)
chr4 (401-429)||(38416650-38416678)
chr4 (401-429)||(38416884-38416912)
chr4 (401-429)||(44232077-44232105)
chr4 (401-429)||(45292066-45292094)
chr4 (401-429)||(47386520-47386548)
[»] chr5 (24 HSPs)
chr5 (398-479)||(30720691-30720772)
chr5 (401-479)||(12807052-12807130)
chr5 (401-479)||(25773649-25773727)
chr5 (394-479)||(36561298-36561383)
chr5 (401-479)||(10285256-10285334)
chr5 (401-479)||(40886809-40886887)
chr5 (401-479)||(16983258-16983336)
chr5 (401-479)||(37900823-37900901)
chr5 (412-479)||(7277621-7277688)
chr5 (401-450)||(15305216-15305265)
chr5 (439-479)||(25683427-25683467)
chr5 (390-472)||(734543-734625)
chr5 (392-429)||(8086264-8086301)
chr5 (401-442)||(15304822-15304863)
chr5 (398-429)||(33387453-33387484)
chr5 (401-439)||(25683229-25683267)
chr5 (449-479)||(30403161-30403191)
chr5 (400-429)||(978311-978340)
chr5 (392-429)||(40156189-40156226)
chr5 (401-429)||(978077-978105)
chr5 (401-429)||(9502627-9502655)
chr5 (401-429)||(14634157-14634185)
chr5 (399-427)||(24992374-24992402)
chr5 (395-439)||(40886604-40886648)
[»] chr1 (35 HSPs)
chr1 (398-479)||(284330-284411)
chr1 (398-479)||(23045478-23045559)
chr1 (400-479)||(321625-321704)
chr1 (400-479)||(24772104-24772183)
chr1 (402-479)||(27211163-27211240)
chr1 (401-479)||(40783856-40783934)
chr1 (393-479)||(47038049-47038135)
chr1 (408-479)||(46771644-46771715)
chr1 (401-479)||(23526240-23526318)
chr1 (399-454)||(41959076-41959131)
chr1 (421-479)||(33082765-33082823)
chr1 (401-454)||(3943060-3943113)
chr1 (401-454)||(9588670-9588723)
chr1 (401-454)||(13984991-13985044)
chr1 (416-479)||(52037319-52037382)
chr1 (401-442)||(44227848-44227889)
chr1 (396-442)||(41959809-41959855)
chr1 (397-479)||(51064955-51065037)
chr1 (401-442)||(3943763-3943804)
chr1 (401-454)||(44228228-44228281)
chr1 (415-467)||(40564241-40564293)
chr1 (401-442)||(9589631-9589672)
chr1 (409-454)||(1168369-1168414)
chr1 (400-429)||(16120674-16120703)
chr1 (393-429)||(40772006-40772043)
chr1 (399-479)||(1749305-1749385)
chr1 (401-429)||(6402644-6402672)
chr1 (401-433)||(10845481-10845513)
chr1 (401-429)||(11641067-11641095)
chr1 (400-432)||(13984436-13984468)
chr1 (401-429)||(30701718-30701746)
chr1 (401-429)||(36399332-36399360)
chr1 (401-429)||(36757486-36757514)
chr1 (401-429)||(40771772-40771800)
chr1 (401-429)||(52024260-52024288)
[»] chr8 (36 HSPs)
chr8 (400-479)||(43275596-43275675)
chr8 (401-479)||(3585451-3585529)
chr8 (401-479)||(40918928-40919006)
chr8 (401-479)||(2540130-2540208)
chr8 (401-479)||(11174422-11174500)
chr8 (401-479)||(11646524-11646602)
chr8 (401-479)||(40058502-40058580)
chr8 (400-479)||(37345570-37345649)
chr8 (393-479)||(36068072-36068158)
chr8 (399-479)||(27034995-27035075)
chr8 (408-479)||(30999720-30999791)
chr8 (401-479)||(7146913-7146991)
chr8 (394-454)||(45278701-45278761)
chr8 (401-454)||(8697898-8697951)
chr8 (401-454)||(41307961-41308014)
chr8 (399-479)||(20546486-20546566)
chr8 (400-454)||(40486453-40486507)
chr8 (401-454)||(10646592-10646645)
chr8 (401-479)||(28562421-28562499)
chr8 (401-479)||(28567919-28567997)
chr8 (401-479)||(28575512-28575590)
chr8 (401-442)||(41305762-41305803)
chr8 (395-439)||(40918725-40918769)
chr8 (393-439)||(7147152-7147198)
chr8 (395-429)||(32998674-32998708)
chr8 (400-429)||(132016-132045)
chr8 (394-439)||(43275392-43275437)
chr8 (401-442)||(45278013-45278053)
chr8 (401-429)||(616783-616811)
chr8 (401-429)||(617017-617045)
chr8 (401-429)||(623176-623204)
chr8 (401-429)||(623410-623438)
chr8 (401-433)||(5878317-5878349)
chr8 (401-429)||(14237514-14237542)
chr8 (401-429)||(40494618-40494646)
chr8 (401-429)||(42587482-42587510)
[»] chr3 (36 HSPs)
chr3 (400-479)||(36881281-36881360)
chr3 (398-479)||(198852-198933)
chr3 (401-479)||(13364843-13364921)
chr3 (401-479)||(19241867-19241945)
chr3 (397-479)||(46694309-46694391)
chr3 (401-479)||(27707363-27707441)
chr3 (401-479)||(29375138-29375216)
chr3 (401-479)||(3383076-3383154)
chr3 (401-479)||(43750137-43750215)
chr3 (400-479)||(23088130-23088209)
chr3 (408-479)||(32835155-32835226)
chr3 (401-479)||(13702769-13702847)
chr3 (401-454)||(12094582-12094635)
chr3 (400-454)||(19911508-19911562)
chr3 (401-454)||(44277455-44277508)
chr3 (401-454)||(38805245-38805298)
chr3 (401-479)||(37293437-37293515)
chr3 (396-442)||(44276770-44276816)
chr3 (401-470)||(48963156-48963223)
chr3 (401-442)||(19912174-19912215)
chr3 (401-442)||(38806341-38806382)
chr3 (395-429)||(19823894-19823928)
chr3 (401-454)||(4235751-4235803)
chr3 (401-442)||(12095423-12095464)
chr3 (418-479)||(48820451-48820512)
chr3 (399-429)||(13499569-13499599)
chr3 (399-429)||(42761717-42761747)
chr3 (392-429)||(20765187-20765224)
chr3 (410-454)||(4226716-4226759)
chr3 (401-429)||(6910568-6910596)
chr3 (401-429)||(20765430-20765458)
chr3 (401-429)||(27010474-27010502)
chr3 (401-429)||(27010708-27010736)
chr3 (401-429)||(42490430-42490458)
chr3 (401-429)||(42761483-42761511)
chr3 (395-427)||(44562020-44562052)
[»] chr7 (26 HSPs)
chr7 (401-479)||(10981508-10981586)
chr7 (401-479)||(27813811-27813889)
chr7 (399-479)||(25614550-25614630)
chr7 (403-479)||(36453323-36453399)
chr7 (399-479)||(47110449-47110529)
chr7 (401-479)||(40348960-40349038)
chr7 (401-454)||(25060133-25060186)
chr7 (401-454)||(2911548-2911601)
chr7 (407-442)||(25059456-25059491)
chr7 (394-429)||(41898222-41898257)
chr7 (398-429)||(47156024-47156055)
chr7 (395-429)||(28061509-28061543)
chr7 (395-429)||(46103364-46103398)
chr7 (401-442)||(2910859-2910900)
chr7 (400-429)||(36623307-36623336)
chr7 (392-425)||(48602427-48602460)
chr7 (401-429)||(16778505-16778533)
chr7 (401-429)||(20885103-20885131)
chr7 (401-429)||(25566548-25566576)
chr7 (401-429)||(28061749-28061777)
chr7 (401-429)||(36623542-36623570)
chr7 (401-429)||(38852081-38852109)
chr7 (401-429)||(41897988-41898016)
chr7 (401-429)||(42877386-42877414)
chr7 (401-429)||(46103597-46103625)
chr7 (401-429)||(47156261-47156289)
[»] chr6 (28 HSPs)
chr6 (401-479)||(1605579-1605657)
chr6 (401-479)||(29260192-29260270)
chr6 (401-479)||(7761301-7761379)
chr6 (400-479)||(8626481-8626560)
chr6 (408-479)||(30734682-30734753)
chr6 (401-479)||(13757208-13757286)
chr6 (401-479)||(15064893-15064971)
chr6 (407-479)||(30734807-30734879)
chr6 (401-464)||(17942443-17942506)
chr6 (416-479)||(31559935-31559998)
chr6 (401-479)||(8235624-8235702)
chr6 (401-454)||(19996715-19996768)
chr6 (399-453)||(4129433-4129487)
chr6 (401-442)||(19996322-19996363)
chr6 (393-429)||(4147923-4147959)
chr6 (398-429)||(25476042-25476073)
chr6 (401-439)||(15064695-15064733)
chr6 (401-439)||(17942682-17942720)
chr6 (400-429)||(22055006-22055035)
chr6 (396-429)||(32671811-32671844)
chr6 (401-429)||(18668688-18668716)
chr6 (401-429)||(18668922-18668950)
chr6 (401-429)||(19087958-19087986)
chr6 (401-429)||(19088192-19088220)
chr6 (401-429)||(20437017-20437045)
chr6 (401-429)||(24623941-24623969)
chr6 (401-429)||(32414913-32414941)
chr6 (401-429)||(32420754-32420782)
[»] chr2 (22 HSPs)
chr2 (401-479)||(3518908-3518986)
chr2 (401-479)||(12969938-12970016)
chr2 (402-479)||(23366790-23366867)
chr2 (401-479)||(1102503-1102581)
chr2 (401-479)||(39938170-39938248)
chr2 (401-479)||(37673936-37674014)
chr2 (401-454)||(34224378-34224431)
chr2 (429-479)||(1646317-1646367)
chr2 (398-439)||(12969737-12969778)
chr2 (394-429)||(11841586-11841621)
chr2 (395-429)||(5405230-5405264)
chr2 (401-439)||(40756911-40756949)
chr2 (400-429)||(44365391-44365420)
chr2 (401-429)||(2183191-2183219)
chr2 (401-429)||(7608283-7608311)
chr2 (393-429)||(8042014-8042050)
chr2 (401-429)||(8042256-8042284)
chr2 (397-429)||(13125141-13125173)
chr2 (401-429)||(19141066-19141094)
chr2 (401-429)||(19141300-19141328)
chr2 (401-429)||(39358146-39358174)
chr2 (397-429)||(39358401-39358433)
[»] scaffold1431 (1 HSPs)
scaffold1431 (401-479)||(98-176)
[»] scaffold0054 (2 HSPs)
scaffold0054 (401-479)||(45454-45532)
scaffold0054 (398-439)||(45692-45733)
[»] scaffold0257 (2 HSPs)
scaffold0257 (401-454)||(23467-23520)
scaffold0257 (398-442)||(23872-23916)
[»] scaffold1770 (1 HSPs)
scaffold1770 (399-453)||(168-222)
[»] scaffold0062 (1 HSPs)
scaffold0062 (416-479)||(462-525)
[»] scaffold0022 (1 HSPs)
scaffold0022 (399-429)||(100645-100675)
[»] scaffold0018 (1 HSPs)
scaffold0018 (395-427)||(67764-67796)


Alignment Details
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 6543079 - 6543434
Alignment:
Q  1 tctttggctcggtaacactcagttattttctccagttcttgaagacaccatcttgaattcgtataattctttgataatatgactacaccaagtttgcaat 100  Q
    ||||||| |||||||||||  ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| |||| |||    
T  6543079 tctttggttcggtaacactgggttattttctccaattcttgaagacaccatctagaatgcgtataattctttgataatatgactacaacaactttggaat 6543178  T
Q  101 gttcaatgacattcagcacggatgttggtatttcttgatctccacttccaatcctctcattgtcccagaaaactatgattccagcttctgaactaagagc 200  Q
     | |||| ||||||||||| || ||||||| |||||||||||||  ||||||||| | || |||||||||||| |||||| |||||| ||||||||||||    
T  6543179 ctgcaatcacattcagcaccgaggttggtacttcttgatctccaaatccaatcctgtaatcgtcccagaaaacaatgatttcagcttgtgaactaagagc 6543278  T
Q  201 tgtatagagttccaaagcaaaagaacccgcatcttcatcacagaaacccaagtacacattgta---------aggaggattggtagtagaagacatggat 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||             ||||||||||||||||||||||||    
T  6543279 tgtatagagttccaaagcaaaagaacccgcatcttcatcacagaaacccaagtacacgtcgtagctctttctctttggattggtagtagaagacatggat 6543378  T
Q  292 ggatttgatgaatattggttaaagtgaaatagaaaaagaagaaatgaccaactgaa 347  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6543379 ggatttgatgaatattggttaaagtgaaatagcaaaagaagaaatgaccaactgaa 6543434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 6737693 - 6737583
Alignment:
Q  9 tcggtaacactcagttattttctccagttcttgaagacaccatcttgaattcgtataattctttgataatatgactacaccaagtttgcaatgttcaatg 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||| ||||||| ||| |||||||| ||||||     
T  6737693 tcggtaacactcagttattttctccaattcttgaagacaccatctagaattagtataattctttgataatacgactacaacaactttgcaatcttcaatc 6737594  T
Q  109 acattcagcac 119  Q
    |||||||||||    
T  6737593 acattcagcac 6737583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 14261044 - 14261122
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14261044 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 14261122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 21310425 - 21310503
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310425 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 21310503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 25704651 - 25704729
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25704651 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 25704729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 22321544 - 22321466
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22321544 tactccttccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 22321466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 24706524 - 24706446
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24706524 tactccatccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 24706446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 12071561 - 12071639
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  12071561 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaataaactaaataaattttgttattttt 12071639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 40122762 - 40122684
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  40122762 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaaaaaaccaaataaattttgttattttt 40122684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 6736141 - 6736057
Alignment:
Q  129 tatttcttgatctccacttccaatcctctcattgtcccagaaaactatgattccagcttctgaactaagagctgtatagagttcc 213  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  6736141 tatttctcgatctccacttccaatcctctcattgtcccagaaaacaatgattccaacttctgaactaagagccgtatagagttcc 6736057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 396 - 479
Target Start/End: Complemental strand, 21661817 - 21661734
Alignment:
Q  396 aatattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  21661817 aataatactccctccctttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttattattttt 21661734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 396 - 479
Target Start/End: Complemental strand, 21670581 - 21670498
Alignment:
Q  396 aatattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  21670581 aataatactccctccctttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaatttttttattttt 21670498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 34324860 - 34324781
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaa-taaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  34324860 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaactaaattaaattttgttattttt 34324781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 44568837 - 44568915
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  44568837 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaaaaaaccaaataaattttgttattttt 44568915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 398 - 479
Target Start/End: Complemental strand, 20249292 - 20249211
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||    
T  20249292 tattactctctccgtttcaaaatacatgtccattttggataaattgtattaaccaagaaaccaaataaattttgttattttt 20249211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 408 - 479
Target Start/End: Original strand, 50767871 - 50767942
Alignment:
Q  408 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  50767871 tccgtttcaaaatacatattcattttagagaaattgcactaatcaagaaaccaaataaattttgttattttt 50767942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 403 - 479
Target Start/End: Original strand, 31892240 - 31892316
Alignment:
Q  403 ctccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||| ||||||||||||| ||||||  |||||||||| ||||||||||| |||||||||||| ||||||||    
T  31892240 ctccctccgtatcaaaatacatgttcattttaaagaaattgcagtaaccaagaaatcaaataaattttattattttt 31892316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 6503166 - 6503226
Alignment:
Q  22 gttattttctccagttcttgaagacaccatcttgaattcgtataattctttgataatatga 82  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||| |||||||    
T  6503166 gttattttctccaattcttgaagacaccatcttgatttagtataattctttgaaaatatga 6503226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 124 - 263
Target Start/End: Original strand, 6523998 - 6524137
Alignment:
Q  124 gttggtatttcttgatctccacttccaatcctctcattgtcccagaaaactatgattccagcttctgaactaagagctgtatagagttccaaagcaaaag 223  Q
    |||| ||||| | ||||||||||||||| |||  ||||||||||||||||    | || ||| |||||||||||||| || ||||||| || ||||||||    
T  6523998 gttgatatttgtcgatctccacttccaagccttgcattgtcccagaaaacagaaactctagcctctgaactaagagccgtgtagagttgcagagcaaaag 6524097  T
Q  224 aacccgcatcttcatcacagaaacccaagtacacattgta 263  Q
    ||||||| ||||  |  || |||| |||||||||||||||    
T  6524098 aacccgcgtctttgttgcaaaaactcaagtacacattgta 6524137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 6506673 - 6506730
Alignment:
Q  22 gttattttctccagttcttgaagacaccatcttgaattcgtataattctttgataata 79  Q
    ||||||||||||| ||||||||||||||||||||||||   |||||||||||| ||||    
T  6506673 gttattttctccaattcttgaagacaccatcttgaattaaaataattctttgaaaata 6506730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 394 - 429
Target Start/End: Original strand, 19433351 - 19433386
Alignment:
Q  394 taaatattactccctccgtttcaaaatacatgtcca 429  Q
    ||||||||||||||||||||||||||||||||||||    
T  19433351 taaatattactccctccgtttcaaaatacatgtcca 19433386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 1988036 - 1988113
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||| || |||| |||||| ||||| |||| |||||||||||| |||| |||||| |||||||||||| ||||||||    
T  1988036 tactccatctgttttaaaatatatgtctattt-ggagaaattgcagtaactaagaaatcaaataaattttattattttt 1988113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 6594015 - 6594125
Alignment:
Q  9 tcggtaacactcagttattttctccagttcttgaagacaccatcttgaattcgtataattctttgataatatgactacaccaagtttgcaatgttcaatg 108  Q
    |||| |||||| |||||||||||||| |||||| | |||| | |||||||| |||||||| ||||| || | ||||||| | | |||||| | || |||     
T  6594015 tcggcaacactgagttattttctccaattcttgtatacacgaacttgaattagtataattttttgaaaacaagactacagcgactttgcagtcttgaatt 6594114  T
Q  109 acattcagcac 119  Q
    |||||||||||    
T  6594115 acattcagcac 6594125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 454
Target Start/End: Original strand, 19361662 - 19361700
Alignment:
Q  416 aaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  19361662 aaaatacatgtccattttggagaaattgcagtaaccaag 19361700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 429
Target Start/End: Complemental strand, 55209840 - 55209808
Alignment:
Q  397 atattactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||||||    
T  55209840 atattactccctccgtttcaaaatacatgtcca 55209808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 429
Target Start/End: Complemental strand, 2760992 - 2760961
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtcca 429  Q
    ||||||||||||||||||||||||||||||||    
T  2760992 tattactccctccgtttcaaaatacatgtcca 2760961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 173
Target Start/End: Complemental strand, 6646249 - 6646090
Alignment:
Q  14 aacactcagttattttctccagttcttgaagacaccatcttgaattcgtataattctttgataatatgactacaccaagtttgcaatgttcaatgacatt 113  Q
    ||||||| ||||| ||||| | ||||||||||||| ||||||||||   ||||||  |||| ||||  | |||| ||| |||||||| ||| || |||||    
T  6646249 aacactcggttatcttctcaaattcttgaagacacgatcttgaattaacataatttcttgaaaatactattacagcaactttgcaatcttctataacatt 6646150  T
Q  114 cagcacggatgttggtatttcttgatctccacttccaatcctctcattgtcccagaaaac 173  Q
    ||  |  || ||||||||| || |||| || ||||||| | ||||||  |||||||||||    
T  6646149 caaaattgaggttggtattcctcgatcaccgcttccaagcttctcatcatcccagaaaac 6646090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 6748019 - 6747960
Alignment:
Q  15 acactcagttattttctccagttcttgaagacaccatcttgaattcgtataattctttga 74  Q
    |||||||||||||||||||| ||| ||||||||||| ||||| |  ||||| ||||||||    
T  6748019 acactcagttattttctccaattcctgaagacaccagcttgattcagtatatttctttga 6747960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 429
Target Start/End: Original strand, 2760728 - 2760758
Alignment:
Q  399 attactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||||    
T  2760728 attactccctccgtttcaaaatacatgtcca 2760758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 442
Target Start/End: Complemental strand, 19362223 - 19362189
Alignment:
Q  408 tccgtttcaaaatacatgtccattttggagaaatt 442  Q
    |||||||||||||||||||||||||| ||||||||    
T  19362223 tccgtttcaaaatacatgtccattttagagaaatt 19362189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 20249006 - 20249052
Alignment:
Q  393 ataaatattactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    ||||||| ||||| |||||||||| ||||| ||||||||||||||||    
T  20249006 ataaataatactcactccgtttcataatacttgtccattttggagaa 20249052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 429
Target Start/End: Original strand, 55209572 - 55209602
Alignment:
Q  399 attactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||||    
T  55209572 attactccctccgtttcaaaatacatgtcca 55209602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 4467520 - 4467548
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  4467520 tactccctccgtttcaaaatacatgtcca 4467548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 12071839 - 12071799
Alignment:
Q  399 attactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    |||||||||||||||||| ||||| |||||||||| |||||    
T  12071839 attactccctccgtttcataatacttgtccattttagagaa 12071799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 26169986 - 26170014
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  26169986 tactccctccgtttcaaaatacatgtcca 26170014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 26170249 - 26170221
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  26170249 tactccctccgtttcaaaatacatgtcca 26170221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 29830343 - 29830371
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  29830343 tactccctccgtttcaaaatacatgtcca 29830371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 35381156 - 35381128
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  35381156 tactccctccgtttcaaaatacatgtcca 35381128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 38416650 - 38416678
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  38416650 tactccctccgtttcaaaatacatgtcca 38416678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 38416912 - 38416884
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  38416912 tactccctccgtttcaaaatacatgtcca 38416884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 44232077 - 44232105
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  44232077 tactccctccgtttcaaaatacatgtcca 44232105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 45292094 - 45292066
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  45292094 tactccctccgtttcaaaatacatgtcca 45292066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 47386548 - 47386520
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  47386548 tactccctccgtttcaaaatacatgtcca 47386520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 398 - 479
Target Start/End: Complemental strand, 30720772 - 30720691
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720772 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 30720691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 12807130 - 12807052
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12807130 tactccctccgtttcaaaatacatgtccattttggagaaattgcattaaccaagaaaccaaataaattttgttattttt 12807052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 25773649 - 25773727
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25773649 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaatcaaataaattttgttattttt 25773727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 394 - 479
Target Start/End: Complemental strand, 36561383 - 36561298
Alignment:
Q  394 taaatattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||| |||||||||||||||||||||||||| || |||||||| ||| |||||||||||||||||||||||||||||    
T  36561383 taaatattactccatccgtttcaaaatacatgtccattttagaaaaattgcagtaatcaagaaaccaaataaattttgttattttt 36561298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 10285334 - 10285256
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  10285334 tactccctccgtttcaaaatagatgtctattttggagaaattgcattaaccaagaaactaaataaattttgttattttt 10285256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 40886887 - 40886809
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  40886887 tactccatccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcgaataaattttgttattttt 40886809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 16983258 - 16983336
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| || |||||    
T  16983258 tactccctctgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataatttttttttttttt 16983336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 37900901 - 37900823
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  37900901 tactccctccgtttcaaaatacacatccattttggagaaattgcagtaaccaagaaactaaataaattttgatattttt 37900823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 412 - 479
Target Start/End: Complemental strand, 7277688 - 7277621
Alignment:
Q  412 tttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  7277688 tttcaaaatacatgtctattttggagaaattggagtaaccaataaaccaaataaattttgttattttt 7277621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 15305265 - 15305216
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 450  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15305265 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 15305216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 25683467 - 25683427
Alignment:
Q  439 aattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  25683467 aattgcaataaccaagaaaccaaataaattttgttattttt 25683427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 472
Target Start/End: Complemental strand, 734625 - 734543
Alignment:
Q  390 ggtataaatattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgt 472  Q
    |||||||||| || ||||||||||||| ||||| ||||||||||| ||||||| | |  |||||  || ||||||||||||||    
T  734625 ggtataaataatattccctccgtttcacaatacttgtccattttgaagaaattactcataccaaagaatcaaataaattttgt 734543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 392 - 429
Target Start/End: Complemental strand, 8086301 - 8086264
Alignment:
Q  392 tataaatattactccctccgtttcaaaatacatgtcca 429  Q
    |||||||| |||||||||||||||||||||||||||||    
T  8086301 tataaataatactccctccgtttcaaaatacatgtcca 8086264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 15304822 - 15304863
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  15304822 tactccctccgttttaaaatacatgtccattttagagaaatt 15304863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 429
Target Start/End: Complemental strand, 33387484 - 33387453
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtcca 429  Q
    ||||||||||||||||||||||||||||||||    
T  33387484 tattactccctccgtttcaaaatacatgtcca 33387453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 439
Target Start/End: Original strand, 25683229 - 25683267
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  25683229 tactccctccgtttcataatacttgtccattttggagaa 25683267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 449 - 479
Target Start/End: Complemental strand, 30403191 - 30403161
Alignment:
Q  449 accaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||    
T  30403191 accaagaaaccaaataaattttgttattttt 30403161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 429
Target Start/End: Complemental strand, 978340 - 978311
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtcca 429  Q
    ||||||||||||||||||||||||||||||    
T  978340 ttactccctccgtttcaaaatacatgtcca 978311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Original strand, 40156189 - 40156226
Alignment:
Q  392 tataaatattactccctccgtttcaaaatacatgtcca 429  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  40156189 tataaatactactccctccgtttcaaaatacatatcca 40156226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 978077 - 978105
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  978077 tactccctccgtttcaaaatacatgtcca 978105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 9502627 - 9502655
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  9502627 tactccctccgtttcaaaatacatgtcca 9502655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 14634157 - 14634185
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  14634157 tactccctccgtttcaaaatacatgtcca 14634185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 24992402 - 24992374
Alignment:
Q  399 attactccctccgtttcaaaatacatgtc 427  Q
    |||||||||||||||||||||||||||||    
T  24992402 attactccctccgtttcaaaatacatgtc 24992374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 40886604 - 40886648
Alignment:
Q  395 aaatattactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    ||||| |||||||||||||||| ||||| |||||||||| |||||    
T  40886604 aaatactactccctccgtttcataatacttgtccattttagagaa 40886648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 398 - 479
Target Start/End: Original strand, 284330 - 284411
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  284330 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 284411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 398 - 479
Target Start/End: Complemental strand, 23045559 - 23045478
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23045559 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 23045478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 321625 - 321704
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  321625 ttactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 321704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 24772183 - 24772104
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24772183 ttactccctccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaaccaaataaattttgttattttt 24772104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 402 - 479
Target Start/End: Complemental strand, 27211240 - 27211163
Alignment:
Q  402 actccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27211240 actccctccgtttcaaaatacatgtccattttggagaaattgcaataaccaagaaaccaaataaattttgttattttt 27211163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 40783934 - 40783856
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40783934 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcaaataaattttgttattttt 40783856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 393 - 479
Target Start/End: Complemental strand, 47038135 - 47038049
Alignment:
Q  393 ataaatattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  47038135 ataaatactactccatccgtttcaaaatacatgtccattttggagaaattgtactaactaagaaatcaaataaattttgttattttt 47038049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 408 - 479
Target Start/End: Original strand, 46771644 - 46771715
Alignment:
Q  408 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  46771644 tccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaattaaataaattttgttattttt 46771715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 23526240 - 23526318
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  23526240 tactccttccatttcaaaatacatgttcattttggagaaattgcagtaatcaagaaaccaaataaattttgttattttt 23526318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 399 - 454
Target Start/End: Original strand, 41959076 - 41959131
Alignment:
Q  399 attactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41959076 attactccctccgtttcaaaatacatgtccattttggagaaattgcaataaccaag 41959131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 421 - 479
Target Start/End: Original strand, 33082765 - 33082823
Alignment:
Q  421 acatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33082765 acatgtctattttggagaaattgcactaaccaagaaatcaaataaattttgttattttt 33082823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 3943060 - 3943113
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3943060 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 3943113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 9588670 - 9588723
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9588670 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 9588723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 13985044 - 13984991
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  13985044 tactccatccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 13984991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 416 - 479
Target Start/End: Complemental strand, 52037382 - 52037319
Alignment:
Q  416 aaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||| ||||||||||| || |||| |||||||||||||||| ||||||||    
T  52037382 aaaatacatgtccattttagagaaattgcattatccaaaaaaccaaataaattttattattttt 52037319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 44227848 - 44227889
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44227848 tactccctccgtttcaaaatacatgtccattttggagaaatt 44227889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 41959855 - 41959809
Alignment:
Q  396 aatattactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  41959855 aataatactccctccgtttcaaaatacatgtccattttagagaaatt 41959809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 479
Target Start/End: Complemental strand, 51065037 - 51064955
Alignment:
Q  397 atattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||| ||||| ||||||||||  ||||||| |||  |||||| || ||||||||| |||| ||||||    
T  51065037 atattactccctccgtttcacaatacttgtccattttaaagaaattacacataccaaggaatcaaataaatgttgtcattttt 51064955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 442
Target Start/End: Complemental strand, 3943804 - 3943763
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  3943804 tactccctccgtttcaaaatacatgtccattttagagaaatt 3943763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 44228281 - 44228228
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    |||| ||||| |||||||||||||||||||||||||||||||||  ||||||||    
T  44228281 tactacctccatttcaaaatacatgtccattttggagaaattgctgtaaccaag 44228228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 467
Target Start/End: Complemental strand, 40564293 - 40564241
Alignment:
Q  415 caaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaat 467  Q
    ||||||| |||||||||||||| |||| ||| |||||||||||||||||||||    
T  40564293 caaaatatatgtccattttggaaaaatcgcagtaaccaagaaaccaaataaat 40564241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 442
Target Start/End: Complemental strand, 9589672 - 9589631
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||||||||||||||||||||||||| ||||| ||||||||    
T  9589672 tactccctccgtttcaaaatacatgtctattttagagaaatt 9589631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 454
Target Start/End: Original strand, 1168369 - 1168414
Alignment:
Q  409 ccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    |||||||||||||||||||  ||||| |||||||||| ||||||||    
T  1168369 ccgtttcaaaatacatgtcgtttttgaagaaattgcagtaaccaag 1168414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 429
Target Start/End: Complemental strand, 16120703 - 16120674
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtcca 429  Q
    ||||||||||||||||||||||||||||||    
T  16120703 ttactccctccgtttcaaaatacatgtcca 16120674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 40772043 - 40772006
Alignment:
Q  393 ataaatat-tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||| |||||||||||||||||||||||||||||    
T  40772043 ataaatatatactccctccgtttcaaaatacatgtcca 40772006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 479
Target Start/End: Original strand, 1749305 - 1749385
Alignment:
Q  399 attactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||  ||||||| ||||||||| |||||||   | ||||  || ||| ||||||| |||||||||||||||||||||    
T  1749305 attactcgatccgttttaaaatacatttccatttaaaaaaaatcacagtaatcaagaaatcaaataaattttgttattttt 1749385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 6402672 - 6402644
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  6402672 tactccctccgtttcaaaatacatgtcca 6402644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 433
Target Start/End: Original strand, 10845481 - 10845513
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccatttt 433  Q
    ||||| |||||||||||||||||||||||||||    
T  10845481 tactcactccgtttcaaaatacatgtccatttt 10845513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 11641067 - 11641095
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  11641067 tactccctccgtttcaaaatacatgtcca 11641095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 432
Target Start/End: Original strand, 13984436 - 13984468
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtccattt 432  Q
    ||||||||||||||||||||||||| |||||||    
T  13984436 ttactccctccgtttcaaaatacatatccattt 13984468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 30701718 - 30701746
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  30701718 tactccctccgtttcaaaatacatgtcca 30701746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 36399360 - 36399332
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  36399360 tactccctccgtttcaaaatacatgtcca 36399332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 36757486 - 36757514
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  36757486 tactccctccgtttcaaaatacatgtcca 36757514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 40771772 - 40771800
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  40771772 tactccctccgtttcaaaatacatgtcca 40771800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 52024288 - 52024260
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  52024288 tactccctccgtttcaaaatacatgtcca 52024260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 43275675 - 43275596
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43275675 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 43275596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 3585451 - 3585529
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585451 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 3585529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 40919006 - 40918928
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40919006 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 40918928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 2540208 - 2540130
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2540208 tacttcctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 2540130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 11174500 - 11174422
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11174500 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 11174422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 11646602 - 11646524
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11646602 tactcccttcgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 11646524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 40058580 - 40058502
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40058580 tactccctccgtttcaaaatacatgtccatttcggagaaattgcactaaccaagaaaccaaataaattttgttattttt 40058502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 37345570 - 37345649
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  37345570 ttactccctccgtttcaaaatacatgtccattttgaagaaattgcaccaaccaagaaaccaaataaattttgttattttt 37345649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 393 - 479
Target Start/End: Original strand, 36068072 - 36068158
Alignment:
Q  393 ataaatattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  36068072 ataaaaattactccctccgtttcaaaatacatgtccattttggaggaattgtactaaccaaaaaaccaaataaattttgttattttt 36068158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 399 - 479
Target Start/End: Original strand, 27034995 - 27035075
Alignment:
Q  399 attactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||    
T  27034995 attactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataattttttttattttt 27035075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 408 - 479
Target Start/End: Complemental strand, 30999791 - 30999720
Alignment:
Q  408 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30999791 tccgtttcaaaatacatgtcaattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 30999720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 7146913 - 7146991
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  7146913 tactccttccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaaccaaataaattttgttattttt 7146991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 394 - 454
Target Start/End: Complemental strand, 45278761 - 45278701
Alignment:
Q  394 taaatattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45278761 taaatattactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 45278701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 8697951 - 8697898
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8697951 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 8697898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 41308014 - 41307961
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41308014 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 41307961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 399 - 479
Target Start/End: Complemental strand, 20546566 - 20546486
Alignment:
Q  399 attactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||| |||||||||| |||||||||||| ||||||||||  || |||||||  ||||||||||||||||||||    
T  20546566 attactccctccatttcaaaatatatgtccattttgaagaaattgcaacaatcaagaaattaaataaattttgttattttt 20546486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 40486507 - 40486453
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  40486507 ttactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 40486453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 10646592 - 10646645
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10646592 tacttcctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 10646645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 28562421 - 28562499
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||| ||||||||||||||||| ||||||||||| ||||||| |||  |||||| || ||||||||| |||| ||||||    
T  28562421 tacttcctccgtttcaaaatacttgtccattttgaagaaattacacataccaaggaatcaaataaatgttgtcattttt 28562499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 28567919 - 28567997
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||| ||||||||||||||||| ||||||||||| ||||||| |||  |||||  || ||||||||| |||| ||||||    
T  28567919 tacttcctccgtttcaaaatacttgtccattttgaagaaattacacataccaatgaatcaaataaatgttgtcattttt 28567997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 28575512 - 28575590
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||| ||||||||||||||||| ||||||||||| ||||||| |||  |||||  || ||||||||| |||| ||||||    
T  28575512 tacttcctccgtttcaaaatacttgtccattttgaagaaattacacataccaatgaatcaaataaatgttgtcattttt 28575590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 41305762 - 41305803
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||| ||||||||||||||||||||||||||| ||||||||    
T  41305762 tactctctccgtttcaaaatacatgtccattttagagaaatt 41305803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 40918725 - 40918769
Alignment:
Q  395 aaatattactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    |||||||||||||||||||||| ||||| |||||||||| |||||    
T  40918725 aaatattactccctccgtttcataatacttgtccattttagagaa 40918769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 7147198 - 7147152
Alignment:
Q  393 ataaatattactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    ||||||| |||||||||||||||| ||||| |||||||||| |||||    
T  7147198 ataaatactactccctccgtttcataatacttgtccattttagagaa 7147152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 429
Target Start/End: Complemental strand, 32998708 - 32998674
Alignment:
Q  395 aaatattactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||| ||||||||||||||||||||    
T  32998708 aaatattactcccttcgtttcaaaatacatgtcca 32998674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 429
Target Start/End: Original strand, 132016 - 132045
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtcca 429  Q
    ||||||||||||||||||||||||||||||    
T  132016 ttactccctccgtttcaaaatacatgtcca 132045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 439
Target Start/End: Original strand, 43275392 - 43275437
Alignment:
Q  394 taaatattactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||    
T  43275392 taaataatactccctccgtttcataatacttgtccattttagagaa 43275437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 45278013 - 45278053
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  45278013 tactccctc-gtttcaaaatacatgtccattttagagaaatt 45278053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 616783 - 616811
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  616783 tactccctccgtttcaaaatacatgtcca 616811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 617045 - 617017
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  617045 tactccctccgtttcaaaatacatgtcca 617017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 623176 - 623204
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  623176 tactccctccgtttcaaaatacatgtcca 623204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 623438 - 623410
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  623438 tactccctccgtttcaaaatacatgtcca 623410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 433
Target Start/End: Original strand, 5878317 - 5878349
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccatttt 433  Q
    ||||||||||||||| |||||||||||||||||    
T  5878317 tactccctccgtttccaaatacatgtccatttt 5878349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 14237542 - 14237514
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  14237542 tactccctccgtttcaaaatacatgtcca 14237514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 40494646 - 40494618
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  40494646 tactccctccgtttcaaaatacatgtcca 40494618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 42587510 - 42587482
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  42587510 tactccctccgtttcaaaatacatgtcca 42587482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 36881281 - 36881360
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36881281 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 36881360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 398 - 479
Target Start/End: Original strand, 198852 - 198933
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  198852 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactgaccaagaaaccaaataaattttgttattttt 198933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 13364843 - 13364921
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13364843 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 13364921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 19241945 - 19241867
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19241945 tactccctccgtttcaaaatacatgtccattttggtgaaattgcactaaccaagaaaccaaataaattttgttattttt 19241867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 397 - 479
Target Start/End: Complemental strand, 46694391 - 46694309
Alignment:
Q  397 atattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46694391 atattactccctccgtttcaaaatacatgtcctttttggagaaattgcactaatcaagaaaccaaataaattttgttattttt 46694309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 27707441 - 27707363
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27707441 tactccctccgtttcgaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttattttt 27707363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 29375138 - 29375216
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  29375138 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttcttattttt 29375216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 3383076 - 3383154
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3383076 tactccttccgtttcaaaatatatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttattttt 3383154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 43750137 - 43750215
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  43750137 tactcccttcgtttcaaaatacatgtccattttggagaaattggagtaaccaagaaaccaaataaattttgttattttt 43750215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 23088209 - 23088130
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||| ||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23088209 ttactccctctgtttcaaaatatatgtctattttgaagaaattgcactaaccaagaaaccaaataaattttgttattttt 23088130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 408 - 479
Target Start/End: Complemental strand, 32835226 - 32835155
Alignment:
Q  408 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  32835226 tccgtttcaaaatacatgtccattttggagaaattgcaataaccaagaaaacaaataaattttgttattttt 32835155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 13702769 - 13702847
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||| ||| ||| |||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  13702769 tactccatccattttaaaatacatgcctattttggagaaattgcagtaaccaagaaaccaaataaattttgatattttt 13702847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 12094582 - 12094635
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12094582 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 12094635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 19911508 - 19911562
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  19911508 ttactccctccgtttcaaaatacatgttcattttggagaaattgcagtaaccaag 19911562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 44277508 - 44277455
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  44277508 tactccctccgtttcaaaatacatgtctattttggagaaattgcagtaaccaag 44277455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 38805245 - 38805298
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  38805245 tactccctccgttttaaaatacatgtccattttagagaaattgcagtaaccaag 38805298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 37293437 - 37293515
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||| ||||| ||||||||||| ||||||| |||  |||||| || ||||||||| |||| ||||||    
T  37293437 tactccctccgtttcacaatacttgtccattttgaagaaattacacataccaaggaatcaaataaatgttgtcattttt 37293515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 44276770 - 44276816
Alignment:
Q  396 aatattactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  44276770 aatattactctctccgtttcaaaatacatgtccattttagagaaatt 44276816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 470
Target Start/End: Original strand, 48963156 - 48963223
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaatttt 470  Q
    |||||||||||||||||||||||| || |||||||||||||||  |||||||| ||| ||||||| ||||    
T  48963156 tactccctccgtttcaaaatacatatctattttggagaaattg--ctaaccaataaatcaaataattttt 48963223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 442
Target Start/End: Complemental strand, 19912215 - 19912174
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  19912215 tactccctccgtttcaaaatacatgtccattttagagaaatt 19912174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 442
Target Start/End: Complemental strand, 38806382 - 38806341
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  38806382 tactccctccgtttcaaaatacatgtccattttagagaaatt 38806341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 429
Target Start/End: Original strand, 19823894 - 19823928
Alignment:
Q  395 aaatattactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||||||||    
T  19823894 aaatattactccctccgtttcaaaatacatgtcca 19823928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 4235751 - 4235803
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||| || ||||||||||||||||||  |||||||||||||||||||||||||    
T  4235751 tactcacttcgtttcaaaatacatgtcg-ttttggagaaattgcactaaccaag 4235803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 442
Target Start/End: Complemental strand, 12095464 - 12095423
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  12095464 tactccctccgtttcaaaatatatgtccattttagagaaatt 12095423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 479
Target Start/End: Complemental strand, 48820512 - 48820451
Alignment:
Q  418 aatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||  |||||||||||||| |  || |||| |||||||||||||||||||||||||    
T  48820512 aatacatgtttattttggagaaattacggtatccaataaaccaaataaattttgttattttt 48820451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 429
Target Start/End: Complemental strand, 13499599 - 13499569
Alignment:
Q  399 attactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||||    
T  13499599 attactccctccgtttcaaaatacatgtcca 13499569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 429
Target Start/End: Complemental strand, 42761747 - 42761717
Alignment:
Q  399 attactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||||    
T  42761747 attactccctccgtttcaaaatacatgtcca 42761717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Original strand, 20765187 - 20765224
Alignment:
Q  392 tataaatattactccctccgtttcaaaatacatgtcca 429  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  20765187 tataaataatactccctccgttttaaaatacatgtcca 20765224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 454
Target Start/End: Original strand, 4226716 - 4226759
Alignment:
Q  410 cgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||    
T  4226716 cgtttcaaaatacatgtcg-ttttggagaaattgcagtaaccaag 4226759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 6910596 - 6910568
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  6910596 tactccctccgtttcaaaatacatgtcca 6910568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 20765458 - 20765430
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  20765458 tactccctccgtttcaaaatacatgtcca 20765430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 27010474 - 27010502
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  27010474 tactccctccgtttcaaaatacatgtcca 27010502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 27010736 - 27010708
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  27010736 tactccctccgtttcaaaatacatgtcca 27010708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 42490458 - 42490430
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  42490458 tactccctccgtttcaaaatacatgtcca 42490430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 42761483 - 42761511
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  42761483 tactccctccgtttcaaaatacatgtcca 42761511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 427
Target Start/End: Complemental strand, 44562052 - 44562020
Alignment:
Q  395 aaatattactccctccgtttcaaaatacatgtc 427  Q
    ||||||||||||||||| |||||||||||||||    
T  44562052 aaatattactccctccgattcaaaatacatgtc 44562020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 10981508 - 10981586
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981508 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 10981586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 27813811 - 27813889
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27813811 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 27813889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 399 - 479
Target Start/End: Complemental strand, 25614630 - 25614550
Alignment:
Q  399 attactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25614630 attactccttccgtttcaaaatacatgtccattttggagaaattgcactaaccaaaaaaccaaataaattttgttattttt 25614550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 403 - 479
Target Start/End: Complemental strand, 36453399 - 36453323
Alignment:
Q  403 ctccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36453399 ctccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttattattttt 36453323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 399 - 479
Target Start/End: Original strand, 47110449 - 47110529
Alignment:
Q  399 attactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47110449 attactccctccatttcaaaatacatgtccattttggagaaattgcactaaccaagaaacaaaataaattttgttattttt 47110529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 40348960 - 40349038
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40348960 tactccttccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaatcaaataaattttgttattttt 40349038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 25060186 - 25060133
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25060186 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 25060133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 2911601 - 2911548
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  2911601 tactccctccatttcaaaatacatgtccattttggagaaattgcagtaaccaag 2911548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 442
Target Start/End: Original strand, 25059456 - 25059491
Alignment:
Q  407 ctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||||||||||||||||||||||||| ||||||||    
T  25059456 ctccgtttcaaaatacatgtccattttagagaaatt 25059491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 429
Target Start/End: Complemental strand, 41898257 - 41898222
Alignment:
Q  394 taaatattactccctccgtttcaaaatacatgtcca 429  Q
    |||||| |||||||||||||||||||||||||||||    
T  41898257 taaataatactccctccgtttcaaaatacatgtcca 41898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 429
Target Start/End: Original strand, 47156024 - 47156055
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtcca 429  Q
    ||||||||||||||||||||||||||||||||    
T  47156024 tattactccctccgtttcaaaatacatgtcca 47156055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 429
Target Start/End: Original strand, 28061509 - 28061543
Alignment:
Q  395 aaatattactccctccgtttcaaaatacatgtcca 429  Q
    ||||| |||||||||||||||||||||||||||||    
T  28061509 aaataatactccctccgtttcaaaatacatgtcca 28061543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 429
Target Start/End: Original strand, 46103364 - 46103398
Alignment:
Q  395 aaatattactccctccgtttcaaaatacatgtcca 429  Q
    ||||| |||||||||||||||||||||||||||||    
T  46103364 aaatagtactccctccgtttcaaaatacatgtcca 46103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 2910859 - 2910900
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||||||||||||||||||||||||| |||||  |||||||    
T  2910859 tactccctccgtttcaaaatacatgtctattttaaagaaatt 2910900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 429
Target Start/End: Original strand, 36623307 - 36623336
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtcca 429  Q
    ||||||||||||||||||||||||||||||    
T  36623307 ttactccctccgtttcaaaatacatgtcca 36623336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 48602427 - 48602460
Alignment:
Q  392 tataaatattactccctccgtttcaaaatacatg 425  Q
    |||||||| |||||||||||||||||||||||||    
T  48602427 tataaatactactccctccgtttcaaaatacatg 48602460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 16778505 - 16778533
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  16778505 tactccctccgtttcaaaatacatgtcca 16778533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 20885103 - 20885131
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  20885103 tactccctccgtttcaaaatacatgtcca 20885131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 25566548 - 25566576
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  25566548 tactccctccgtttcaaaatacatgtcca 25566576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 28061777 - 28061749
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  28061777 tactccctccgtttcaaaatacatgtcca 28061749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 36623570 - 36623542
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  36623570 tactccctccgtttcaaaatacatgtcca 36623542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 38852109 - 38852081
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  38852109 tactccctccgtttcaaaatacatgtcca 38852081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 41897988 - 41898016
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  41897988 tactccctccgtttcaaaatacatgtcca 41898016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 42877386 - 42877414
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  42877386 tactccctccgtttcaaaatacatgtcca 42877414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 46103625 - 46103597
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  46103625 tactccctccgtttcaaaatacatgtcca 46103597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 47156289 - 47156261
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  47156289 tactccctccgtttcaaaatacatgtcca 47156261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 1605579 - 1605657
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1605579 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 1605657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 29260192 - 29260270
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29260192 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 29260270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 7761301 - 7761379
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7761301 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaactaaataaattttgttattttt 7761379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 8626481 - 8626560
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  8626481 ttactccctccgtttcaaaatacatgtccattttgaagaaattgcattaaccaagaaaccaaataaattttgttattttt 8626560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 408 - 479
Target Start/End: Complemental strand, 30734753 - 30734682
Alignment:
Q  408 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30734753 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 30734682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 13757208 - 13757286
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13757208 tactctctccgtttcaaaatacatgtccattttggagaaattacactaaccaagaaaccaaataaattttgttattttt 13757286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 15064971 - 15064893
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  15064971 tactccctccgtttcaaaatacatgtccattttagagaaattgcagcaaccaagaaaccaaataaattttgttattttt 15064893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 407 - 479
Target Start/End: Complemental strand, 30734879 - 30734807
Alignment:
Q  407 ctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||| |||||||||| |||| || ||| |||||||||||||||||||||    
T  30734879 ctccgtttcaaaatacatgtccattttgaagaaattgcagtaacaaaaaaatcaaataaattttgttattttt 30734807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 401 - 464
Target Start/End: Original strand, 17942443 - 17942506
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaata 464  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17942443 tactcccttcgtttcaaaatacatgtccatttttgagaaattgcagtaaccaagaaaccaaata 17942506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 416 - 479
Target Start/End: Complemental strand, 31559998 - 31559935
Alignment:
Q  416 aaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  31559998 aaaatacatgtccattttggagaaattgcattaaccaaaaaatcaaataaattttgttattttt 31559935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 8235624 - 8235702
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||  ||| ||||||||||| ||||||| |||||||||| |||||||||||| ||||||| ||||||||||||    
T  8235624 tactccctctattttaaaatacatgtacattttgaagaaattgcagtaaccaagaaacgaaataaaatttgttattttt 8235702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 19996768 - 19996715
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  19996768 tactccctccgtttcaaaatacatgtctattttggagaaattgcagtaaccaag 19996715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 453
Target Start/End: Original strand, 4129433 - 4129487
Alignment:
Q  399 attactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaa 453  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  4129433 attactccctccgtttcaaaatacatatccactttggagaaattgcagtaaccaa 4129487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 19996322 - 19996363
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  19996322 tactccctccgtttcaaaatacatgtccattttagagaaatt 19996363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 4147923 - 4147959
Alignment:
Q  393 ataaatattactccctccgtttcaaaatacatgtcca 429  Q
    ||||||| |||||||||||||||||||||||||||||    
T  4147923 ataaataatactccctccgtttcaaaatacatgtcca 4147959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 429
Target Start/End: Complemental strand, 25476073 - 25476042
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtcca 429  Q
    ||||||||||||||||||||||||||||||||    
T  25476073 tattactccctccgtttcaaaatacatgtcca 25476042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 439
Target Start/End: Original strand, 15064695 - 15064733
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  15064695 tactccctccgtttcataatacttgtccattttggagaa 15064733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 439
Target Start/End: Complemental strand, 17942720 - 17942682
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  17942720 tactccctccgtttcataatacttgtccattttggagaa 17942682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 429
Target Start/End: Complemental strand, 22055035 - 22055006
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtcca 429  Q
    ||||||||||||||||||||||||||||||    
T  22055035 ttactccctccgtttcaaaatacatgtcca 22055006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 429
Target Start/End: Original strand, 32671811 - 32671844
Alignment:
Q  396 aatattactccctccgtttcaaaatacatgtcca 429  Q
    |||| |||||||||||||||||||||||||||||    
T  32671811 aataatactccctccgtttcaaaatacatgtcca 32671844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 18668688 - 18668716
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  18668688 tactccctccgtttcaaaatacatgtcca 18668716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 18668950 - 18668922
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  18668950 tactccctccgtttcaaaatacatgtcca 18668922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 19087958 - 19087986
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  19087958 tactccctccgtttcaaaatacatgtcca 19087986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 19088220 - 19088192
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  19088220 tactccctccgtttcaaaatacatgtcca 19088192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 20437017 - 20437045
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  20437017 tactccctccgtttcaaaatacatgtcca 20437045  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 24623941 - 24623969
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  24623941 tactccctccgtttcaaaatacatgtcca 24623969  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 32414941 - 32414913
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  32414941 tactccctccgtttcaaaatacatgtcca 32414913  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 32420782 - 32420754
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  32420782 tactccctccgtttcaaaatacatgtcca 32420754  T

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Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 3518908 - 3518986
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3518908 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 3518986  T

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Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 12970016 - 12969938
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12970016 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 12969938  T

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Target: chr2; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 402 - 479
Target Start/End: Original strand, 23366790 - 23366867
Alignment:
Q  402 actccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23366790 actccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 23366867  T

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Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 1102503 - 1102581
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1102503 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttattttt 1102581  T

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Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 39938170 - 39938248
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39938170 tactccctccgtttcaaaatacatgaccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 39938248  T

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Target: chr2; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 37674014 - 37673936
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37674014 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcaaataaattttgttattttt 37673936  T

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Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 34224431 - 34224378
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34224431 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 34224378  T

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Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 429 - 479
Target Start/End: Original strand, 1646317 - 1646367
Alignment:
Q  429 attttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  1646317 attttggagaaattgcagcaaccaagaaactaaataaattttgttattttt 1646367  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 439
Target Start/End: Original strand, 12969737 - 12969778
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  12969737 tattactccctccgtttcataatacttgtccattttggagaa 12969778  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 429
Target Start/End: Original strand, 11841586 - 11841621
Alignment:
Q  394 taaatattactccctccgtttcaaaatacatgtcca 429  Q
    ||||| ||||||||||||||||||||||||||||||    
T  11841586 taaatgttactccctccgtttcaaaatacatgtcca 11841621  T

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Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 429
Target Start/End: Complemental strand, 5405264 - 5405230
Alignment:
Q  395 aaatattactccctccgtttcaaaatacatgtcca 429  Q
    ||||| |||||||||||||||||||||||||||||    
T  5405264 aaataatactccctccgtttcaaaatacatgtcca 5405230  T

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Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 439
Target Start/End: Original strand, 40756911 - 40756949
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40756911 tactccctccgtttcataatacttgtccattttggagaa 40756949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 429
Target Start/End: Complemental strand, 44365420 - 44365391
Alignment:
Q  400 ttactccctccgtttcaaaatacatgtcca 429  Q
    ||||||||||||||||||||||||||||||    
T  44365420 ttactccctccgtttcaaaatacatgtcca 44365391  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 2183219 - 2183191
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  2183219 tactccctccgtttcaaaatacatgtcca 2183191  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 7608311 - 7608283
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  7608311 tactccctccgtttcaaaatacatgtcca 7608283  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 8042014 - 8042050
Alignment:
Q  393 ataaatattactccctccgtttcaaaatacatgtcca 429  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  8042014 ataaatactactccctccgtttcaaaatatatgtcca 8042050  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 8042284 - 8042256
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  8042284 tactccctccgtttcaaaatacatgtcca 8042256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 429
Target Start/End: Original strand, 13125141 - 13125173
Alignment:
Q  397 atattactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||| ||||||||||||||||||||||    
T  13125141 atattactccatccgtttcaaaatacatgtcca 13125173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 19141066 - 19141094
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  19141066 tactccctccgtttcaaaatacatgtcca 19141094  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Complemental strand, 19141328 - 19141300
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  19141328 tactccctccgtttcaaaatacatgtcca 19141300  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 429
Target Start/End: Original strand, 39358146 - 39358174
Alignment:
Q  401 tactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||    
T  39358146 tactccctccgtttcaaaatacatgtcca 39358174  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 429
Target Start/End: Complemental strand, 39358433 - 39358401
Alignment:
Q  397 atattactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||| ||||||||||||||||||    
T  39358433 atattactccctccatttcaaaatacatgtcca 39358401  T

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Target: scaffold1431 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 401 - 479
Target Start/End: Complemental strand, 176 - 98
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  176 tactctctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 98  T

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Target: scaffold0054 (Bit Score: 71; Significance: 6e-32; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 45454 - 45532
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45454 tactccctccgtttcaaaatacatgttcattttggagaaattgcaccaaccaagaaaccaaataaattttgttattttt 45532  T

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Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 439
Target Start/End: Complemental strand, 45733 - 45692
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtccattttggagaa 439  Q
    ||||||||||||||||||| ||||| |||||||||| |||||    
T  45733 tattactccctccgtttcataatacttgtccattttagagaa 45692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 23467 - 23520
Alignment:
Q  401 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaag 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23467 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 23520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 442
Target Start/End: Complemental strand, 23916 - 23872
Alignment:
Q  398 tattactccctccgtttcaaaatacatgtccattttggagaaatt 442  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||    
T  23916 tattactccatccgtttcaaaatacatgtccattttagagaaatt 23872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 453
Target Start/End: Original strand, 168 - 222
Alignment:
Q  399 attactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaa 453  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  168 attactccctccgtttcaaaatacatatccactttggagaaattgcagtaaccaa 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 479
Target Start/End: Complemental strand, 525 - 462
Alignment:
Q  416 aaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 479  Q
    ||||||||||| |||||||| ||||||||| ||| ||| ||| |||||||||||||||||||||    
T  525 aaaatacatgttcattttggcgaaattgcagtaatcaaaaaatcaaataaattttgttattttt 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 429
Target Start/End: Original strand, 100645 - 100675
Alignment:
Q  399 attactccctccgtttcaaaatacatgtcca 429  Q
    |||||||||||||||||||||||||||||||    
T  100645 attactccctccgtttcaaaatacatgtcca 100675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 427
Target Start/End: Original strand, 67764 - 67796
Alignment:
Q  395 aaatattactccctccgtttcaaaatacatgtc 427  Q
    |||||||||||| ||||||||||||||||||||    
T  67764 aaatattactccatccgtttcaaaatacatgtc 67796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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