View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0784-Insertion-7 (Length: 375)

Name: NF0784-Insertion-7
Description: NF0784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0784-Insertion-7
NF0784-Insertion-7
[»] chr7 (33 HSPs)
chr7 (8-196)||(39242697-39242885)
chr7 (190-374)||(18440320-18440504)
chr7 (190-375)||(9169306-9169491)
chr7 (201-357)||(4221744-4221900)
chr7 (201-357)||(8003077-8003233)
chr7 (201-357)||(9094123-9094279)
chr7 (201-357)||(40043115-40043271)
chr7 (201-357)||(42875584-42875740)
chr7 (198-357)||(176623-176782)
chr7 (198-357)||(457997-458156)
chr7 (190-357)||(2706624-2706791)
chr7 (198-357)||(17951125-17951284)
chr7 (198-357)||(20988790-20988949)
chr7 (201-354)||(24743837-24743990)
chr7 (201-354)||(26391108-26391261)
chr7 (201-357)||(1997292-1997448)
chr7 (201-357)||(6868241-6868397)
chr7 (201-357)||(6878883-6879039)
chr7 (201-357)||(26654347-26654503)
chr7 (198-357)||(8627078-8627237)
chr7 (198-357)||(22098874-22099033)
chr7 (190-371)||(13175591-13175772)
chr7 (198-354)||(11014921-11015077)
chr7 (198-340)||(11004312-11004454)
chr7 (198-357)||(9442996-9443155)
chr7 (204-298)||(15705614-15705708)
chr7 (198-299)||(13879083-13879184)
chr7 (198-310)||(15466703-15466815)
chr7 (198-299)||(4413082-4413183)
chr7 (242-311)||(16311082-16311151)
chr7 (190-310)||(16408741-16408861)
chr7 (198-301)||(13028040-13028143)
chr7 (205-299)||(27870655-27870749)
[»] scaffold0042 (1 HSPs)
scaffold0042 (190-374)||(4417-4601)
[»] chr8 (32 HSPs)
chr8 (190-374)||(3842673-3842857)
chr8 (190-375)||(16746145-16746330)
chr8 (190-371)||(22148553-22148734)
chr8 (201-357)||(29075895-29076051)
chr8 (201-357)||(29086146-29086302)
chr8 (201-357)||(32078658-32078814)
chr8 (201-357)||(36087677-36087833)
chr8 (201-354)||(3349600-3349753)
chr8 (201-354)||(9367449-9367602)
chr8 (201-354)||(13689535-13689688)
chr8 (201-354)||(36302681-36302834)
chr8 (201-357)||(251563-251719)
chr8 (201-357)||(814664-814820)
chr8 (201-357)||(849937-850093)
chr8 (198-357)||(19138432-19138590)
chr8 (198-357)||(30315687-30315846)
chr8 (201-357)||(6160192-6160348)
chr8 (198-357)||(15781673-15781832)
chr8 (198-357)||(26120062-26120221)
chr8 (198-357)||(19428074-19428235)
chr8 (190-323)||(21297867-21298000)
chr8 (198-354)||(44490866-44491022)
chr8 (190-310)||(45569042-45569162)
chr8 (190-328)||(23792376-23792514)
chr8 (8-139)||(4617789-4617921)
chr8 (190-301)||(19942163-19942274)
chr8 (198-299)||(24834268-24834369)
chr8 (198-299)||(22672711-22672812)
chr8 (198-299)||(17287271-17287372)
chr8 (198-310)||(17015502-17015614)
chr8 (198-310)||(17541587-17541699)
chr8 (242-299)||(18676651-18676708)
[»] scaffold0084 (1 HSPs)
scaffold0084 (190-374)||(57736-57920)
[»] chr6 (32 HSPs)
chr6 (190-374)||(22307890-22308074)
chr6 (201-357)||(3671152-3671308)
chr6 (201-357)||(25985185-25985341)
chr6 (201-357)||(34808099-34808255)
chr6 (198-357)||(12864636-12864795)
chr6 (198-357)||(20030858-20031017)
chr6 (198-357)||(26874507-26874666)
chr6 (198-357)||(32962883-32963042)
chr6 (191-328)||(17609425-17609562)
chr6 (201-354)||(26035128-26035281)
chr6 (198-341)||(9113446-9113589)
chr6 (201-354)||(12717776-12717929)
chr6 (204-357)||(16958719-16958872)
chr6 (202-375)||(6157251-6157424)
chr6 (190-363)||(11205061-11205234)
chr6 (190-363)||(25725433-25725606)
chr6 (190-371)||(18554386-18554567)
chr6 (198-341)||(28252521-28252664)
chr6 (198-340)||(27412190-27412332)
chr6 (198-341)||(27505033-27505177)
chr6 (198-354)||(32301986-32302142)
chr6 (198-341)||(27503409-27503552)
chr6 (190-371)||(17063318-17063499)
chr6 (190-310)||(22385705-22385829)
chr6 (198-301)||(26043301-26043404)
chr6 (274-371)||(21127211-21127308)
chr6 (198-299)||(14054483-14054584)
chr6 (190-251)||(17609637-17609698)
chr6 (198-299)||(18434454-18434555)
chr6 (198-301)||(19469555-19469658)
chr6 (242-299)||(13434875-13434932)
chr6 (190-291)||(17446759-17446860)
[»] chr3 (62 HSPs)
chr3 (190-374)||(17282345-17282529)
chr3 (190-370)||(8741056-8741236)
chr3 (190-374)||(1063278-1063460)
chr3 (190-375)||(4432900-4433085)
chr3 (190-375)||(13262582-13262767)
chr3 (190-375)||(1784986-1785171)
chr3 (190-375)||(7795530-7795715)
chr3 (190-375)||(9381573-9381758)
chr3 (190-375)||(11207004-11207189)
chr3 (190-354)||(8996881-8997045)
chr3 (201-357)||(20674124-20674280)
chr3 (198-357)||(37884730-37884889)
chr3 (190-371)||(17016918-17017099)
chr3 (201-357)||(505097-505253)
chr3 (201-357)||(4753473-4753629)
chr3 (201-357)||(5537948-5538104)
chr3 (201-357)||(5580560-5580716)
chr3 (201-357)||(8784417-8784573)
chr3 (201-357)||(12287907-12288063)
chr3 (201-357)||(14475375-14475531)
chr3 (201-357)||(16391975-16392131)
chr3 (201-357)||(38204406-38204562)
chr3 (198-357)||(19788173-19788332)
chr3 (198-357)||(23767045-23767204)
chr3 (201-354)||(5866626-5866779)
chr3 (201-354)||(11273315-11273468)
chr3 (201-354)||(24384448-24384601)
chr3 (201-354)||(24669624-24669777)
chr3 (201-357)||(5520022-5520178)
chr3 (190-310)||(15848037-15848157)
chr3 (201-375)||(12238526-12238700)
chr3 (190-363)||(15652029-15652203)
chr3 (190-310)||(12753759-12753879)
chr3 (201-375)||(9982797-9982971)
chr3 (201-327)||(41693403-41693529)
chr3 (190-310)||(29934537-29934657)
chr3 (190-310)||(29983691-29983811)
chr3 (198-357)||(6491273-6491432)
chr3 (198-357)||(13373595-13373754)
chr3 (198-357)||(13384189-13384348)
chr3 (198-357)||(29462145-29462304)
chr3 (198-355)||(10627877-10628034)
chr3 (190-290)||(47541929-47542029)
chr3 (198-340)||(28315182-28315324)
chr3 (190-310)||(13147180-13147301)
chr3 (198-341)||(16396961-16397104)
chr3 (198-340)||(39381835-39381977)
chr3 (192-280)||(14312416-14312504)
chr3 (198-299)||(5211357-5211458)
chr3 (197-301)||(16031443-16031547)
chr3 (198-299)||(2560133-2560234)
chr3 (190-295)||(15960451-15960556)
chr3 (198-299)||(53057832-53057933)
chr3 (198-241)||(6183009-6183052)
chr3 (198-299)||(11188942-11189043)
chr3 (190-255)||(12410861-12410926)
chr3 (198-299)||(21639788-21639889)
chr3 (198-310)||(19886186-19886298)
chr3 (190-297)||(14078448-14078555)
chr3 (201-299)||(11221742-11221840)
chr3 (198-299)||(11222493-11222594)
chr3 (258-310)||(17240038-17240090)
[»] chr2 (27 HSPs)
chr2 (190-375)||(28722247-28722432)
chr2 (190-375)||(26878774-26878959)
chr2 (190-375)||(24415955-24416140)
chr2 (198-357)||(43092385-43092544)
chr2 (190-328)||(24802627-24802765)
chr2 (201-357)||(10276696-10276852)
chr2 (198-357)||(4219602-4219761)
chr2 (198-357)||(9898520-9898679)
chr2 (198-357)||(24328696-24328855)
chr2 (198-357)||(29253926-29254085)
chr2 (201-354)||(11396122-11396275)
chr2 (190-371)||(19303361-19303542)
chr2 (201-357)||(39171041-39171197)
chr2 (201-357)||(43354139-43354295)
chr2 (198-357)||(9763710-9763869)
chr2 (198-357)||(40250315-40250474)
chr2 (201-357)||(22915807-22915963)
chr2 (198-357)||(34791164-34791323)
chr2 (190-363)||(22773470-22773643)
chr2 (198-340)||(35262710-35262852)
chr2 (198-340)||(35273335-35273477)
chr2 (198-255)||(21162996-21163053)
chr2 (190-295)||(24843131-24843236)
chr2 (198-310)||(25828094-25828206)
chr2 (198-296)||(22782685-22782783)
chr2 (198-297)||(22257134-22257233)
chr2 (237-295)||(20567201-20567259)
[»] scaffold0407 (1 HSPs)
scaffold0407 (219-374)||(13071-13226)
[»] chr5 (52 HSPs)
chr5 (190-375)||(17456357-17456542)
chr5 (190-375)||(20552847-20553032)
chr5 (190-375)||(21705008-21705193)
chr5 (190-375)||(24982454-24982639)
chr5 (190-375)||(34052992-34053177)
chr5 (190-375)||(23393441-23393626)
chr5 (198-357)||(1120954-1121113)
chr5 (198-357)||(27621824-27621983)
chr5 (198-357)||(39353546-39353705)
chr5 (198-357)||(43620946-43621105)
chr5 (198-375)||(19465004-19465181)
chr5 (201-357)||(6976856-6977012)
chr5 (201-357)||(9337004-9337160)
chr5 (201-357)||(14031092-14031248)
chr5 (201-357)||(22677166-22677322)
chr5 (201-357)||(23297327-23297483)
chr5 (201-357)||(23363160-23363316)
chr5 (201-357)||(24568138-24568294)
chr5 (201-357)||(24826530-24826686)
chr5 (201-357)||(34772959-34773115)
chr5 (201-357)||(35216553-35216709)
chr5 (201-357)||(36592172-36592328)
chr5 (201-357)||(37739622-37739778)
chr5 (198-357)||(5300194-5300353)
chr5 (198-357)||(31834530-31834689)
chr5 (198-357)||(40391408-40391567)
chr5 (201-354)||(14456667-14456820)
chr5 (201-354)||(14567708-14567861)
chr5 (201-354)||(15741022-15741175)
chr5 (198-357)||(16002948-16003107)
chr5 (190-371)||(23487478-23487659)
chr5 (204-357)||(24808966-24809119)
chr5 (201-354)||(27461215-27461368)
chr5 (198-357)||(22147566-22147725)
chr5 (198-375)||(31419697-31419874)
chr5 (198-354)||(17608115-17608271)
chr5 (190-310)||(25112995-25113115)
chr5 (190-310)||(25172086-25172206)
chr5 (190-325)||(11209077-11209212)
chr5 (190-371)||(13532912-13533093)
chr5 (198-354)||(17719971-17720127)
chr5 (198-354)||(31349587-31349743)
chr5 (198-354)||(36688751-36688907)
chr5 (198-340)||(23697847-23697989)
chr5 (198-340)||(27051889-27052031)
chr5 (198-340)||(30237078-30237220)
chr5 (198-340)||(42043847-42043989)
chr5 (201-294)||(39500542-39500635)
chr5 (198-310)||(31144398-31144510)
chr5 (198-299)||(26764402-26764503)
chr5 (198-310)||(26783332-26783444)
chr5 (190-310)||(21200099-21200219)
[»] scaffold0068 (1 HSPs)
scaffold0068 (190-375)||(8717-8902)
[»] chr1 (23 HSPs)
chr1 (198-375)||(7690420-7690597)
chr1 (198-357)||(5640679-5640838)
chr1 (201-357)||(3181297-3181453)
chr1 (201-357)||(5842900-5843056)
chr1 (201-357)||(7516980-7517136)
chr1 (201-357)||(38104781-38104937)
chr1 (198-357)||(4176995-4177154)
chr1 (198-357)||(12615292-12615451)
chr1 (198-355)||(21876841-21876998)
chr1 (201-354)||(47608908-47609061)
chr1 (198-357)||(12740221-12740380)
chr1 (201-357)||(19186901-19187058)
chr1 (190-371)||(22018249-22018430)
chr1 (201-357)||(38094155-38094312)
chr1 (198-340)||(35639024-35639166)
chr1 (198-340)||(36237416-36237558)
chr1 (198-340)||(51630178-51630320)
chr1 (190-271)||(20874280-20874361)
chr1 (12-100)||(45985681-45985770)
chr1 (190-299)||(23023802-23023911)
chr1 (190-295)||(18613845-18613950)
chr1 (198-299)||(22431148-22431249)
chr1 (198-299)||(21125404-21125505)
[»] scaffold0047 (2 HSPs)
scaffold0047 (190-341)||(33889-34040)
scaffold0047 (198-357)||(41418-41577)
[»] chr4 (30 HSPs)
chr4 (190-341)||(14837055-14837206)
chr4 (190-341)||(16316484-16316635)
chr4 (190-352)||(3389605-3389767)
chr4 (198-357)||(19945269-19945428)
chr4 (198-357)||(27815877-27816036)
chr4 (190-371)||(14711740-14711921)
chr4 (201-357)||(18131180-18131336)
chr4 (201-357)||(36028059-36028215)
chr4 (201-357)||(55746183-55746339)
chr4 (198-357)||(460328-460487)
chr4 (198-357)||(22006182-22006341)
chr4 (198-357)||(27175839-27175998)
chr4 (198-357)||(30927424-30927583)
chr4 (201-354)||(10741532-10741685)
chr4 (201-354)||(10955301-10955454)
chr4 (201-354)||(27666341-27666494)
chr4 (201-357)||(16265633-16265789)
chr4 (198-357)||(14844583-14844742)
chr4 (198-357)||(17927864-17928023)
chr4 (198-357)||(40455291-40455450)
chr4 (201-375)||(5021904-5022078)
chr4 (190-328)||(16820318-16820456)
chr4 (198-354)||(18753424-18753580)
chr4 (198-340)||(49517302-49517444)
chr4 (198-341)||(18065739-18065882)
chr4 (192-269)||(11470428-11470505)
chr4 (198-299)||(17246516-17246617)
chr4 (201-255)||(4988828-4988882)
chr4 (234-310)||(10662242-10662318)
chr4 (234-310)||(10876387-10876463)
[»] scaffold0105 (1 HSPs)
scaffold0105 (201-357)||(37925-38081)
[»] scaffold0443 (1 HSPs)
scaffold0443 (190-371)||(2015-2196)
[»] scaffold0017 (1 HSPs)
scaffold0017 (190-371)||(41346-41527)
[»] scaffold0022 (4 HSPs)
scaffold0022 (198-357)||(44725-44884)
scaffold0022 (198-299)||(36377-36478)
scaffold0022 (198-299)||(134437-134538)
scaffold0022 (190-288)||(158070-158168)
[»] scaffold0382 (1 HSPs)
scaffold0382 (190-328)||(2289-2427)
[»] scaffold0012 (1 HSPs)
scaffold0012 (190-328)||(11329-11467)
[»] scaffold1820 (1 HSPs)
scaffold1820 (190-323)||(562-695)
[»] scaffold1507 (1 HSPs)
scaffold1507 (190-328)||(379-517)
[»] scaffold0011 (2 HSPs)
scaffold0011 (190-310)||(165719-165839)
scaffold0011 (242-299)||(66481-66538)
[»] scaffold0211 (1 HSPs)
scaffold0211 (190-328)||(545-683)
[»] scaffold0038 (1 HSPs)
scaffold0038 (198-341)||(52721-52864)
[»] scaffold0161 (2 HSPs)
scaffold0161 (190-300)||(11172-11282)
scaffold0161 (190-300)||(15845-15955)
[»] scaffold0035 (1 HSPs)
scaffold0035 (198-310)||(110653-110765)
[»] scaffold0116 (1 HSPs)
scaffold0116 (190-303)||(21997-22110)
[»] scaffold0315 (1 HSPs)
scaffold0315 (190-310)||(7600-7720)
[»] scaffold0439 (1 HSPs)
scaffold0439 (198-299)||(7766-7867)
[»] scaffold0113 (1 HSPs)
scaffold0113 (190-299)||(2128-2237)
[»] scaffold0004 (1 HSPs)
scaffold0004 (198-299)||(210346-210447)
[»] scaffold0317 (1 HSPs)
scaffold0317 (198-310)||(11557-11669)
[»] scaffold0003 (1 HSPs)
scaffold0003 (198-299)||(98631-98732)
[»] scaffold0498 (1 HSPs)
scaffold0498 (190-290)||(1264-1364)
[»] scaffold0359 (1 HSPs)
scaffold0359 (198-299)||(6787-6888)
[»] scaffold0056 (1 HSPs)
scaffold0056 (198-299)||(26713-26814)
[»] scaffold0037 (1 HSPs)
scaffold0037 (190-301)||(76191-76302)
[»] scaffold0217 (1 HSPs)
scaffold0217 (198-299)||(18006-18107)
[»] scaffold0290 (1 HSPs)
scaffold0290 (242-310)||(19706-19774)
[»] scaffold0146 (1 HSPs)
scaffold0146 (258-310)||(14110-14162)


Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 39242885 - 39242697
Alignment:
Q  8 ctgacagcaagagctataaaaggagaggaaacagtcaatgaacaaaattagttacagattaagcactgccagatattcaacattccaaaaaaggatctct 107  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39242885 ctgacagcaagagctacaaaaggagaggaaacagtcaatgaacaaaattagttacagattaagcactgccagatattcaacattccaaaaaaggatctct 39242786  T
Q  108 gaagatataccattttcccaaacagtatttctattggcctttattgatggctgccatttaggctcgtgcatccggtcaagagcttcaag 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  39242785 gaagatataccattttcccaaacagtatttctattggcctttattgatggctgccacttaggcccgtgcatccggtcaagagcttcaag 39242697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 190 - 374
Target Start/End: Original strand, 18440320 - 18440504
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18440320 cttcaagaatgtcccatagttcttcatccaatcccatgatgtagttgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 18440419  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 374  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| | ||||||||||| ||||||||||||||||||    
T  18440420 agcttttccagaatctgatttcctatcagcagtatcatagtcatgtttgacactattgtattttgtggatgtagtggattcatct 18440504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 9169306 - 9169491
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  9169306 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 9169405  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  9169406 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 9169491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 4221744 - 4221900
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  4221744 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 4221843  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  4221844 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 4221900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 8003233 - 8003077
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  8003233 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 8003134  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  8003133 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 8003077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 9094123 - 9094279
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  9094123 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 9094222  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  9094223 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 9094279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 40043271 - 40043115
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  40043271 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 40043172  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  40043171 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 40043115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 42875584 - 42875740
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  42875584 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 42875683  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  42875684 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 42875740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 176623 - 176782
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  176623 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 176722  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  176723 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 176782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 458156 - 457997
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  458156 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 458057  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  458056 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 190 - 357
Target Start/End: Complemental strand, 2706791 - 2706624
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||| ||||||||||||| |||||||||||||||||||||| |||||||||| || || ||||||| |||||||||||||||||||||||| ||||||||    
T  2706791 cttccagaatgtcccataactcttcatccaatcccatgataaagctgtacatatttgtcttccaccatgaaaactcttctggatctccattaaactttgg 2706692  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||||||||||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  2706691 agcttttccagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 2706624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 17951284 - 17951125
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  17951284 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 17951185  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  17951184 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 17951125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 20988790 - 20988949
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  20988790 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 20988889  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||| | |||||||||| ||| |||||| |  ||||||||||||    
T  20988890 cagagtctgttttcttgtcaacagtatcatagtcatgcttgacacttgtgtattttgtag 20988949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Original strand, 24743837 - 24743990
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24743837 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 24743936  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  24743937 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 24743990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 26391261 - 26391108
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26391261 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 26391162  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  26391161 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 26391108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 1997292 - 1997448
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    ||||||||||||||||||||| |||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  1997292 tcccatagctcttcatccaattccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 1997391  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  1997392 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 1997448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 6868397 - 6868241
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    ||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  6868397 tcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 6868298  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  6868297 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 6868241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 6879039 - 6878883
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    ||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  6879039 tcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 6878940  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  6878939 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 6878883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 26654503 - 26654347
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26654503 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 26654404  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  26654403 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 26654347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 8627078 - 8627237
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||| ||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  8627078 atgtcccataactcttcatccaatctcatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 8627177  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  8627178 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 8627237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 22098874 - 22099033
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  22098874 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagtttttc 22098973  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  22098974 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 22099033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 190 - 371
Target Start/End: Complemental strand, 13175772 - 13175591
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| ||| | |||||||||||||||||||  ||||||||||||||||||||||| ||||||||    
T  13175772 cttcaagaatatcccacagctcctcatctaatcccatgatgtagttatacatgttggttttccaccaagaaaactcttctggatctccattaaactttgg 13175673  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    ||||||||||||||||| |||  ||||||| ||| |||| | ||||   |||||  ||||| ||||||||||| | ||||||    
T  13175672 agcttttccagaatctgttttcttgtcagcagtaccataatcatgtccaacattagtgtatcttgtagatgtacttgattca 13175591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 198 - 354
Target Start/End: Original strand, 11014921 - 11015077
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  11014921 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 11015020  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  11015021 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 11015077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Original strand, 11004312 - 11004454
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  11004312 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 11004411  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  11004412 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 11004454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 9442996 - 9443155
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||| |||||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  9442996 atgtcccagagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttatggatctccattaaactttggagcttttc 9443095  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    || | || | |||  ||||||| ||||| |||| ||| |||| | |  ||||||||||||    
T  9443096 caaagtcagttttcttgtcagcagtatcgtagtcatgcttgatacttgtgtattttgtag 9443155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 15705708 - 15705614
Alignment:
Q  204 catagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcc 298  Q
    ||||||||| |||| || ||||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||||||||||||| |||||||    
T  15705708 catagctctccatctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattgaactttggaacttttcc 15705614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 13879083 - 13879184
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||||||||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||  ||||||||||||||||||||| ||||||    
T  13879083 atgtcccatagctcttcatctaaacccatgaaatgactatagaagttggtcttccaccaggaaaattctttaggatctccattgaactttggaacttttc 13879182  T
Q  298 ca 299  Q
    ||    
T  13879183 ca 13879184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 310
Target Start/End: Original strand, 15466703 - 15466815
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||| ||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||  ||||||||||||||||||||| ||||||    
T  15466703 atgtctcatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattctttaggatctccattgaactttggaacttttc 15466802  T
Q  298 cagaatctgattt 310  Q
    || |||| |||||    
T  15466803 cataatcagattt 15466815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 4413183 - 4413082
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || | ||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||| ||||| ||| | ||||    
T  4413183 atgtcccatagttcttcatctaaactcatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattaaacttaggaacatttc 4413084  T
Q  298 ca 299  Q
    ||    
T  4413083 ca 4413082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 16311151 - 16311082
Alignment:
Q  242 gttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaatctgatttt 311  Q
    |||||| |||||||  ||||| ||||| ||||||||||| ||||||||| |||||||||| || ||||||    
T  16311151 gttggtcttccaccaggaaaattcttcaggatctccattaaactttggaacttttccagagtcagatttt 16311082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 16408741 - 16408861
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| |||||||| ||||| ||||  ||  ||||| |||  || ||||| || ||||||||||  ||||||||||| || | |||||| ||||||||    
T  16408741 cttcaagtatgtcccaaagctcatcatttaaatccatgttatgactatacatatttgttttccaccaagaaaactcttcagggtttccattaaactttgg 16408840  T
Q  290 agcttttccagaatctgattt 310  Q
    |||||| ||||| || |||||    
T  16408841 agctttgccagagtcggattt 16408861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 13028143 - 13028040
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| ||||||   ||||| ||||  ||||||||||| ||||||||| ||||||    
T  13028143 atgtcccatagttcttcatctaaacccatgacatgactatagaagttggtcttccactaggaaaattctttaggatctccattaaactttggaacttttc 13028044  T
Q  298 caga 301  Q
    ||||    
T  13028043 caga 13028040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 27870655 - 27870749
Alignment:
Q  205 atagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcca 299  Q
    |||| |||||||| || ||||||| ||  ||||| | ||||||||||||||   |||| ||||| ||||||||||| ||||| ||| ||||||||    
T  27870655 atagttcttcatctaaacccatgacatgactgtagaagttggttttccaccagaaaaattcttccggatctccattaaacttaggaacttttcca 27870749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 190 - 374
Target Start/End: Original strand, 4417 - 4601
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4417 cttcaagaatgtcccatagctcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 4516  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 374  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  4517 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgacactattgtattttgtagatgtagtggattcatct 4601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 2e-83; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 190 - 374
Target Start/End: Original strand, 3842673 - 3842857
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3842673 cttcaagaatgtcccatagctcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 3842772  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 374  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  3842773 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgacactattgtattttgtagatgtagtggattcatct 3842857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 16746145 - 16746330
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  16746145 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 16746244  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    ||||||||||||||||||||| || ||||| ||| |||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  16746245 agcttttccagaatctgatttcctttcagcagtaccatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 16746330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 190 - 371
Target Start/End: Complemental strand, 22148734 - 22148553
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  22148734 cttcaagaatatcccacagctcttcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaattcttctggatctccattgaactttgg 22148635  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    | |||||||||||||||||||  |||||| |||| |||||| |||  | ||||| |||||  |||||||||||| |||||||    
T  22148634 accttttccagaatctgatttcttgtcagatgtaccatagtcatgactaacattattgtaccttgtagatgtagaggattca 22148553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 29075895 - 29076051
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  29075895 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 29075994  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  29075995 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 29076051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 29086146 - 29086302
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  29086146 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 29086245  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  29086246 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 29086302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 32078814 - 32078658
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  32078814 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 32078715  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  32078714 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 32078658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 36087677 - 36087833
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36087677 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 36087776  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  36087777 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 36087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 3349753 - 3349600
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  3349753 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 3349654  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  3349653 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 3349600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Original strand, 9367449 - 9367602
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  9367449 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 9367548  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  9367549 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 9367602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 13689688 - 13689535
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  13689688 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 13689589  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  13689588 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 13689535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Original strand, 36302681 - 36302834
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36302681 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 36302780  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  36302781 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 36302834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 251563 - 251719
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  251563 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 251662  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  251663 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 251719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 814664 - 814820
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  814664 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 814763  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  814764 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 814820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 850093 - 849937
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  850093 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 849994  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  849993 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 849937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 19138432 - 19138590
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| || ||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19138432 atgtcccatagctcttcatccaatcccatgata-agttgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 19138530  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  19138531 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 19138590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 30315846 - 30315687
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  30315846 atgtcccatagcttttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctgaatctccattaaactttggagcttttc 30315747  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  30315746 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 30315687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 6160192 - 6160348
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| | |||||||||| ||||||||||| |||||||||||||||||||    
T  6160192 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccataaaaactcttccggatctccattaaactttggagcttttccag 6160291  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  6160292 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 6160348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 15781832 - 15781673
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||| ||||||| ||||    
T  15781832 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaaccttggagcctttc 15781733  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  15781732 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 15781673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 26120062 - 26120221
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  26120062 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaaccttggagcttttc 26120161  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||| | |||||||||| ||| |||||| |  ||||||||||||    
T  26120162 cagagtctgttttcttgtcaacagtatcatagtcatgcttgacacttgtgtattttgtag 26120221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 19428074 - 19428235
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19428074 atgtcccatagctcttcatccaaacccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 19428173  T
Q  298 cagaatctgattttctgtcagctgtatc--atagttatgtttgacattgttgtattttgtag 357  Q
    |||| | || |||  ||||||| |||||  ||||| |||||||||| |  ||||||||||||    
T  19428174 cagagtttgttttcttgtcagcagtatcatatagtcatgtttgacacttgtgtattttgtag 19428235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 190 - 323
Target Start/End: Original strand, 21297867 - 21298000
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| | ||||||||||||||||||    
T  21297867 cttcaagaatatcccacaactcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttcagaatctccattgaactttgg 21297966  T
Q  290 agcttttccagaatctgattttctgtcagctgta 323  Q
    |||||||||||||||||||||  | |||||||||    
T  21297967 agcttttccagaatctgatttcttatcagctgta 21298000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 198 - 354
Target Start/End: Original strand, 44490866 - 44491022
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  44490866 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 44490965  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  44490966 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 44491022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 45569162 - 45569042
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||  ||||||||||| ||| |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  45569162 cttcaagaatatcccacagctcatcatttaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttcaggatctccattgaactttgg 45569063  T
Q  290 agcttttccagaatctgattt 310  Q
    |||||||||||||||||||||    
T  45569062 agcttttccagaatctgattt 45569042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 328
Target Start/End: Original strand, 23792376 - 23792514
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| || || || |||||||| || |||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  23792376 cttcaagaatatcacaaagatcttcatctaaacccatgatgtagatgtacatgttggttttccaccaagaaaactcttctggatctccattgaacattgg 23792475  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcata 328  Q
    |||||||| | ||||||||||  |||||| |||| ||||    
T  23792476 agcttttcaaaaatctgatttcttgtcagatgtaccata 23792514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 4617789 - 4617921
Alignment:
Q  8 ctgacagcaagagctataaaaggagaggaaacagtcaatgaac-aaaattagttacagattaagcactgccagatattcaacattccaaaaaaggatctc 106  Q
    |||||||||||||||| |||| || ||||||||||| |||||| ||||||  | ||||||||||| ||||||||||||||| ||||||| ||||  |||     
T  4617789 ctgacagcaagagctacaaaaagaaaggaaacagtcgatgaacaaaaattcatcacagattaagcgctgccagatattcaagattccaagaaagtgtctt 4617888  T
Q  107 tgaagatataccattttcccaaacagtatttct 139  Q
      |||||||||||||||||||||||||||||||    
T  4617889 caaagatataccattttcccaaacagtatttct 4617921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 19942163 - 19942274
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| ||||||||||| |||||||| ||  |||||| |||| |||| | ||||||||||||||  ||||| | ||| ||||||||||||||||||||    
T  19942163 cttcaagtatgtcccatagttcttcatctaaatccatgacatagttgtagaagttggttttccaccaagaaaattattcaggatctccattgaactttgg 19942262  T
Q  290 agcttttccaga 301  Q
    | ||||||||||    
T  19942263 aacttttccaga 19942274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 24834369 - 24834268
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| || ||||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||||||||||||| ||||||    
T  24834369 atgtcccataactcttcatctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattgaactttggaacttttc 24834270  T
Q  298 ca 299  Q
    ||    
T  24834269 ca 24834268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 22672711 - 22672812
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||| || || ||||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||||||||||| | ||||||    
T  22672711 atgtcccatagctcttcgtctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattgaactttgaaacttttc 22672810  T
Q  298 ca 299  Q
    ||    
T  22672811 ca 22672812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 17287372 - 17287271
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||||||||||||| ||||||    
T  17287372 atgtcccatagatcttcatctaaacccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatctccattgaactttggaacttttc 17287273  T
Q  298 ca 299  Q
    ||    
T  17287272 ca 17287271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 310
Target Start/End: Original strand, 17015502 - 17015614
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| ||||||   ||||| | ||| ||||||||||||||||||| | ||||||    
T  17015502 atgtcccatagttcttcatctaaacccatgacatgactatagaagttggtcttccactaggaaaatttttcaggatctccattgaactttgaaacttttc 17015601  T
Q  298 cagaatctgattt 310  Q
    |||| || |||||    
T  17015602 cagagtcggattt 17015614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 17541699 - 17541587
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| ||||||   ||||| | ||| ||||||||||||||||||| | ||||||    
T  17541699 atgtcccatagttcttcatctaaacccatgacatgactatagaagttggtcttccactaggaaaatttttcaggatctccattgaactttgaaacttttc 17541600  T
Q  298 cagaatctgattt 310  Q
    |||| || |||||    
T  17541599 cagagtcggattt 17541587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 18676651 - 18676708
Alignment:
Q  242 gttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcca 299  Q
    |||||| |||||||  ||||| ||||| |||||| |||||||||||||| ||||||||    
T  18676651 gttggtcttccaccaggaaaattcttcaggatcttcattgaactttggaacttttcca 18676708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 190 - 374
Target Start/End: Complemental strand, 57920 - 57736
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  57920 cttcaagaatgtcccatagctcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 57821  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 374  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||||||||||||| ||||||||    
T  57820 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgacactattgtattttgtagatgtagtgtattcatct 57736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 190 - 374
Target Start/End: Original strand, 22307890 - 22308074
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  22307890 cttcaagaatgtcccatagctcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctagatctccattgaactttgg 22307989  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 374  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||| ||||||||||||||||||||    
T  22307990 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgacactattgtattttatagatgtagtggattcatct 22308074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 3671152 - 3671308
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  3671152 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 3671251  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  3671252 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 3671308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 25985185 - 25985341
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  25985185 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 25985284  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  25985285 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 25985341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 34808255 - 34808099
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  34808255 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 34808156  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  34808155 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 34808099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 12864636 - 12864795
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  12864636 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 12864735  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  12864736 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 12864795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 20031017 - 20030858
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| | |||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  20031017 atgtcccatagctcttcatccaatcccatgataaaactgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 20030918  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| |||||||||  |  ||||||||||||    
T  20030917 cagagtctgttttcttgtcagcagtatcatagtcatgtttgacgcttgtgtattttgtag 20030858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 26874507 - 26874666
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  26874507 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 26874606  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  26874607 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 26874666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 32963042 - 32962883
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  32963042 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 32962943  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  32962942 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 32962883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 191 - 328
Target Start/End: Complemental strand, 17609562 - 17609425
Alignment:
Q  191 ttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgga 290  Q
    ||||||||| ||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  17609562 ttcaagaatatcccacagctcctcatccaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgga 17609463  T
Q  291 gcttttccagaatctgattttctgtcagctgtatcata 328  Q
    ||||||||||||||||||||  | ||||||||| ||||    
T  17609462 gcttttccagaatctgatttcttatcagctgtaccata 17609425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Original strand, 26035128 - 26035281
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26035128 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 26035227  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  26035228 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 26035281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 341
Target Start/End: Complemental strand, 9113589 - 9113446
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  9113589 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttctaccatgaaaactcttctggatctccattaaactttggagcttttc 9113490  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 341  Q
    |||| |||| |||  ||||||| |||||||||| ||| ||||||    
T  9113489 cagagtctgttttcttgtcagcagtatcatagtcatgcttgaca 9113446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 12717929 - 12717776
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  12717929 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 12717830  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  |||||||  ||||||||| ||| |||||| |  |||||||||    
T  12717829 agtctgttttcttgtcagcaatatcatagtcatgcttgacacttgtgtattttg 12717776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 204 - 357
Target Start/End: Original strand, 16958719 - 16958872
Alignment:
Q  204 catagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaat 303  Q
    ||||||||||||||||||||||||||| || ||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |    
T  16958719 catagctcttcatccaatcccatgataaagttgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccagagt 16958818  T
Q  304 ctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    ||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  16958819 ctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 16958872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 202 - 375
Target Start/End: Original strand, 6157251 - 6157424
Alignment:
Q  202 cccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccaga 301  Q
    ||||||||||||||||||| ||||||||| |||| ||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  6157251 cccatagctcttcatccaaacccatgataaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagctttaccaga 6157350  T
Q  302 atctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
     |||| |||  |||||||  ||||||||| |||||||||| |  ||||||||  ||||||||| ||||| ||||    
T  6157351 gtctgttttcttgtcagcattatcatagtcatgtttgacacttgtgtattttaaagatgtagttgattcctctc 6157424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 190 - 363
Target Start/End: Original strand, 11205061 - 11205234
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| | ||| ||||| ||||| ||||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  11205061 cttcaagaatattccacagctcctcatctaatcccatgatgtagctatacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 11205160  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtag 363  Q
    |||||||||||||| ||||||  |||||| |||| |||| | || ||| | |||  ||||| ||||||||||||    
T  11205161 agcttttccagaatttgatttcttgtcagttgtaccataatcattttttatattagtgtatcttgtagatgtag 11205234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 190 - 363
Target Start/End: Complemental strand, 25725606 - 25725433
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||    
T  25725606 cttcaagaatatcccacagctcttcatctaatcctatgatgtagctgtacatattggttttcaaccaagaaaactcttctggatctccattgaactttgg 25725507  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtag 363  Q
    |||||||||||||||||||||  ||||||  ||| |||| | ||  ||||||||  ||||  ||||||||||||    
T  25725506 agcttttccagaatctgatttcttgtcagacgtaccataatcatagttgacattagtgtaccttgtagatgtag 25725433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 190 - 371
Target Start/End: Original strand, 18554386 - 18554567
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  18554386 cttcaagaatatcccacagctcctcatctaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctggatctccattgaacattgg 18554485  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    |||||||| | ||||||||||  |||||| |||| |||| | ||| || |||||  ||||  ||||| |||||| |||||||    
T  18554486 agcttttcaaaaatctgatttcttgtcagatgtaccataatcatgattaacattagtgtaccttgtacatgtagaggattca 18554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 341
Target Start/End: Complemental strand, 28252664 - 28252521
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||| ||||||||  |||| ||||| || |||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  28252664 atgtcccatagctcttcatccaaacccatgatgaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaggagcttttc 28252565  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 341  Q
    |||| |||| |||  ||||||| |||||||||| ||| ||||||    
T  28252564 cagagtctgttttcttgtcagccgtatcatagtcatgcttgaca 28252521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Original strand, 27412190 - 27412332
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  27412190 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 27412289  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  27412290 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 27412332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 198 - 341
Target Start/End: Original strand, 27505033 - 27505177
Alignment:
Q  198 atgtcccatagctcttcatccaatccc-atgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagctttt 296  Q
    |||| |||||||||||||||||| ||| |||||| |||| ||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||     
T  27505033 atgtaccatagctcttcatccaaaccccatgataaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttta 27505132  T
Q  297 ccagaatctgattttctgtcagctgtatcatagttatgtttgaca 341  Q
    ||||| |||| |||  ||||||| |||||||||| ||||||||||    
T  27505133 ccagagtctgttttcttgtcagcagtatcatagtcatgtttgaca 27505177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 198 - 354
Target Start/End: Complemental strand, 32302142 - 32301986
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  32302142 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 32302043  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    |||| |||| |||  ||||||| || ||||||| ||| |||||| |  |||||||||    
T  32302042 cagagtctgttttcttgtcagcagtgtcatagtcatgcttgacacttgtgtattttg 32301986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 198 - 341
Target Start/End: Original strand, 27503409 - 27503552
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||| ||||||||  |||| ||||| || |||||||||| |||||||||||||||||||||||| ||||| |||||||| |    
T  27503409 atgtcccatagctcttcatccaaacccatgatgaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaggagctttac 27503508  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 341  Q
    |||| |||| |||  ||||||| |||||||||| ||| ||||||    
T  27503509 cagagtctgttttcttgtcagccgtatcatagtcatgcttgaca 27503552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 190 - 371
Target Start/End: Original strand, 17063318 - 17063499
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||||||||| ||||||||||| |||| |||| | ||| ||||||| || ||||| ||||  ||||||||||||||||||||||| ||||||||    
T  17063318 cttcaagaatgtcccacagctcttcatctaatctcatgttgtagttgtacatatttgtttttcaccaagaaaactcttctggatctccattaaactttgg 17063417  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    |||||||||| | |||| |||  | ||||| || |||||||||||    ||| |  ||||| ||||||||||||||||||||    
T  17063418 agcttttccaaactctgttttcttttcagcagtgtcatagttatgaccaacacttgtgtatcttgtagatgtagtggattca 17063499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 22385705 - 22385829
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccct----gaaaactcttctggatctccattgaact 285  Q
    |||||||||| ||||| || || ||||||||||||||||| |||||||||||||||||||||||| |     ||||||||||| ||||||||||||||||    
T  22385705 cttcaagaatatcccacagttcatcatccaatcccatgatgtagctgtacatgttggttttccacgcaccaagaaaactcttcaggatctccattgaact 22385804  T
Q  286 ttggagcttttccagaatctgattt 310  Q
    || || |||||||||||||||||||    
T  22385805 tttgaacttttccagaatctgattt 22385829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 198 - 301
Target Start/End: Original strand, 26043301 - 26043404
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||| || ||||||||||  || ||||||||||||||||||||||| |||||||||||||    
T  26043301 atgtcccatagctcttcatccaaacccatgataaagctatacatatttgttttccaccaagagaactcttctggatctccattgaattttggagcttttc 26043400  T
Q  298 caga 301  Q
    ||||    
T  26043401 caga 26043404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 21127211 - 21127308
Alignment:
Q  274 ctccattgaactttggagcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||| ||| |||||| ||||   |||||  ||||| ||||||||||| ||||||||    
T  21127211 ctccattgaacttttgagcttttccagaatctgatttcttgtcagcagtaccatagtcatgtccaacattagtgtatcttgtagatgtactggattca 21127308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 14054584 - 14054483
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||| || |||||| ||||||    
T  14054584 atgtcccatagttcttcatctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattaaattttggaacttttc 14054485  T
Q  298 ca 299  Q
    ||    
T  14054484 ca 14054483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 17609698 - 17609637
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttc 251  Q
    |||||||||| ||||| ||||| ||||||||||||||||| ||| |||||||||||||||||    
T  17609698 cttcaagaatatcccacagctcctcatccaatcccatgatgtagttgtacatgttggttttc 17609637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 18434454 - 18434555
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| |||||  |||||||||||||||||||| ||||||    
T  18434454 atgtcccatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaagatctccattgaactttggaacttttc 18434553  T
Q  298 ca 299  Q
    ||    
T  18434554 ca 18434555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 301
Target Start/End: Original strand, 19469555 - 19469658
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||| ||||| ||||||||||| ||||||| ||   | || | ||||||||||||||  || || ||||| ||||||||||| ||||||||| |||| |    
T  19469555 atgtctcatagttcttcatccaaacccatgacatgattataaaagttggttttccaccaagagaattcttcaggatctccattaaactttggaactttac 19469654  T
Q  298 caga 301  Q
    ||||    
T  19469655 caga 19469658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 13434875 - 13434932
Alignment:
Q  242 gttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcca 299  Q
    |||||| |||||||  ||||| ||||  ||||||||||||||||||||| ||||||||    
T  13434875 gttggtcttccaccaggaaaattctttaggatctccattgaactttggaacttttcca 13434932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 291
Target Start/End: Complemental strand, 17446860 - 17446759
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| || || ||||| || |||||||| |  || ||||| |||||||||||||  || || ||||| ||||||||||| ||| ||||    
T  17446860 cttcaagaatatcccaaagttcatcatctaaacccatgatgtgactatacatcttggttttccaccaagagaattcttcaggatctccattaaaccttgg 17446761  T
Q  290 ag 291  Q
    ||    
T  17446760 ag 17446759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 3e-76; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 190 - 374
Target Start/End: Complemental strand, 17282529 - 17282345
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  17282529 cttcaagaatgtcccataactcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttga 17282430  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 374  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||||| | |||||||||||| |||||||||||||||||    
T  17282429 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgacactattgtattttgtaaatgtagtggattcatct 17282345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 190 - 370
Target Start/End: Complemental strand, 8741236 - 8741056
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8741236 cttcaagaatatcccatagctcttcatccaatcccatgatgtagctttacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 8741137  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattc 370  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||||||| | |||||||||||||||||||| |||||    
T  8741136 agcttttccagaatctgatttcctttcagctgtatcatagtcatgtttgacactattgtattttgtagatgtagtagattc 8741056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 190 - 374
Target Start/End: Original strand, 1063278 - 1063460
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1063278 cttcaagaatgtcccatagctcctcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 1063377  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 374  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||||||   ||||||||||| |||||| |||||||||||    
T  1063378 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgaca--cttgtattttgttgatgtaatggattcatct 1063460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 4432900 - 4433085
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  4432900 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctgggtctccattgaactttgg 4432999  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||| | ||||||||| |||| ||||| ||||| ||||    
T  4433000 agcttttccagaatctgattttctttcagcagtatcatagtcatgtttgacactattgtattttatagaagtagttgattcctctc 4433085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 13262767 - 13262582
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  13262767 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 13262668  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    ||||||| ||||||||||||| || ||||| ||||| |||| |||||||||| | |||||||||||||||||||| ||||| ||||    
T  13262667 agcttttacagaatctgatttcctttcagcagtatcgtagtcatgtttgacactattgtattttgtagatgtagttgattcctctc 13262582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 1785171 - 1784986
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  1785171 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 1785072  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    |||||||||||||| |||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  1785071 agcttttccagaatttgatttcctttcagcagtatcatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 1784986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 7795715 - 7795530
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  7795715 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 7795616  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  7795615 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 7795530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 9381758 - 9381573
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  9381758 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 9381659  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  9381658 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 9381573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 11207189 - 11207004
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  11207189 cttcaagaatatcccatagttcttcatccaatcccatgatatagctatacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 11207090  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  11207089 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 11207004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 190 - 354
Target Start/End: Complemental strand, 8997045 - 8996881
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  8997045 cttcaagaatatcccatagctcctcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccactgaactttgg 8996946  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    |||||||||||||||||||||  ||||||| |||||||  | |||||||||| | ||||||||||    
T  8996945 agcttttccagaatctgatttcttgtcagcagtatcattctcatgtttgacactattgtattttg 8996881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 20674280 - 20674124
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  20674280 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 20674181  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| |||||||||| |  ||||||||||||    
T  20674180 agtctgttttcttgtcagcagtatcatagtcatgtttgacacttgtgtattttgtag 20674124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 37884730 - 37884889
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  37884730 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 37884829  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  37884830 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 37884889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 190 - 371
Target Start/End: Original strand, 17016918 - 17017099
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  17016918 cttcaagaatatcccacagctcctcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 17017017  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    |||||||||||||||||||||  | ||||| ||| |||| | ||||   |||||  ||||| ||||||||||| ||||||||    
T  17017018 agcttttccagaatctgatttcttatcagcagtaccataatcatgtccaacattagtgtatcttgtagatgtactggattca 17017099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 505253 - 505097
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  505253 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 505154  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  505153 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 505097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 4753473 - 4753629
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  4753473 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 4753572  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  4753573 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 4753629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 5538104 - 5537948
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  5538104 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 5538005  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5538004 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 5537948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 5580716 - 5580560
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  5580716 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 5580617  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5580616 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 5580560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 8784417 - 8784573
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  8784417 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 8784516  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  8784517 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 8784573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 12288063 - 12287907
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  12288063 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 12287964  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  12287963 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 12287907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 14475375 - 14475531
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  14475375 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 14475474  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  14475475 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 14475531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 16392131 - 16391975
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  16392131 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 16392032  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  16392031 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 16391975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 38204406 - 38204562
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  38204406 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 38204505  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  38204506 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 38204562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 19788173 - 19788332
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19788173 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 19788272  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  19788273 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 19788332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 23767045 - 23767204
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  23767045 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 23767144  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  23767145 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 23767204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 5866779 - 5866626
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  5866779 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 5866680  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  5866679 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 5866626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 11273468 - 11273315
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  11273468 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 11273369  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  11273368 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 11273315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 24384601 - 24384448
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24384601 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 24384502  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  24384501 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 24384448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Original strand, 24669624 - 24669777
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24669624 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 24669723  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  24669724 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 24669777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 5520022 - 5520178
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  5520022 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 5520121  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5520122 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 5520178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 15848037 - 15848157
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  15848037 cttcaagaatatcccacagctcctcatccaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 15848136  T
Q  290 agcttttccagaatctgattt 310  Q
    |||||||||||||||||||||    
T  15848137 agcttttccagaatctgattt 15848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 201 - 375
Target Start/End: Complemental strand, 12238700 - 12238526
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||| ||||| || |||||||||| ||||||||||||||| |||||||| |||||||||||||| ||||    
T  12238700 tcccatagctcttcatccaatcccatgataaagctatacatatttgttttccaccatgaaaactcttctgggtctccattaaactttggagctttaccag 12238601  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    | |||| |||  ||||||| |||||||||| |||||||||| |  |||||||| | |||||||| ||||| ||||    
T  12238600 agtctgttttcttgtcagccgtatcatagtcatgtttgacacttgtgtattttatggatgtagttgattcctctc 12238526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 190 - 363
Target Start/End: Complemental strand, 15652203 - 15652029
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccct-gaaaactcttctggatctccattgaactttg 288  Q
    |||||||||| ||||| || |||||||| ||||||||||| |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  15652203 cttcaagaatatcccacagttcttcatctaatcccatgatgtagctgtacatgttggttttccacacaagaaaactcttctggatctccattgaactttg 15652104  T
Q  289 gagcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtag 363  Q
    ||||||||||||| ||||||||  |||||| |||| |||||| ||| || ||||| |||||  | ||||||||||    
T  15652103 gagcttttccagagtctgatttcttgtcagatgtaccatagtcatgattaacattattgtacctagtagatgtag 15652029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 12753879 - 12753759
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  12753879 cttcaagaatatcccacagctcatcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggatcttcattgaactttgg 12753780  T
Q  290 agcttttccagaatctgattt 310  Q
    |||||||||||||||||||||    
T  12753779 agcttttccagaatctgattt 12753759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 201 - 375
Target Start/End: Complemental strand, 9982971 - 9982797
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||| ||||| || |||||||||| ||||||||||||||| |||||||| |||||||||||||| ||||    
T  9982971 tcccatagctcttcatccaatcccatgataaagctatacatatttgttttccaccatgaaaactcttctgggtctccattaaactttggagctttaccag 9982872  T
Q  301 aatctgattttct-gtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    | |||| |||||| |||||| |||||||||| |||||||||| |  |||||||| | |||||||| ||||| ||||    
T  9982871 agtctg-ttttctagtcagccgtatcatagtcatgtttgacacttgtgtattttatggatgtagttgattcctctc 9982797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 41693403 - 41693529
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  41693403 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 41693502  T
Q  301 aatctgattttctgtcagctgtatcat 327  Q
    | |||| |||  ||||||| |||||||    
T  41693503 agtctgttttcttgtcagcagtatcat 41693529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 29934657 - 29934537
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||| | |||||||||||||||    
T  29934657 cttcaagaatatcccacagctcttcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggttttccattgaactttgg 29934558  T
Q  290 agcttttccagaatctgattt 310  Q
    ||||||||||||||| |||||    
T  29934557 agcttttccagaatcagattt 29934537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 29983811 - 29983691
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||| | |||||||||||||||    
T  29983811 cttcaagaatatcccacagctcttcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggttttccattgaactttgg 29983712  T
Q  290 agcttttccagaatctgattt 310  Q
    ||||||||||||||| |||||    
T  29983711 agcttttccagaatcagattt 29983691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 6491432 - 6491273
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| || ||||||| || |||||||||| ||| |||||||||||||||||||| ||| ||||||||||||    
T  6491432 atgtcccataactcttcatccaatcccatgataaagttgtacatattagttttccaccatgagaactcttctggatctccattaaaccttggagcttttc 6491333  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  6491332 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 6491273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 13373754 - 13373595
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||  |||||||||| ||| ||||||||||||    
T  13373754 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttccagatctccattaaaccttggagcttttc 13373655  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  13373654 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 13373595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 13384348 - 13384189
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||  |||||||||| ||| ||||||||||||    
T  13384348 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttccagatctccattaaaccttggagcttttc 13384249  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  13384248 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 13384189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 29462304 - 29462145
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||| || |||||||||| ||||||||||||||| |||||||| ||||| |||||||| |    
T  29462304 atgtcccatagctcttcatccaaacccatgataaagctatacatatttgttttccaccatgaaaactcttctgggtctccattaaacttaggagctttac 29462205  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| |||||||||| |  ||||||||||||    
T  29462204 cagagtctgttttcttgtcagcagtatcatagtcatgtttgacacttgtgtattttgtag 29462145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 355
Target Start/End: Complemental strand, 10628034 - 10627877
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||| || |||||||||| |||||||||||||||||||||||| ||||| |||||||| |    
T  10628034 atgtcccatagctcttcatccaaacccatgataaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaggagctttac 10627935  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgt 355  Q
    |||| |||| |||  ||||||| |||||||| | |||||||||| |  ||||||||||    
T  10627934 cagagtctgttttcttgtcagcagtatcataatcatgtttgacacttgtgtattttgt 10627877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 190 - 290
Target Start/End: Original strand, 47541929 - 47542029
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  47541929 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctgggtctccattgaactttgg 47542028  T
Q  290 a 290  Q
    |    
T  47542029 a 47542029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Complemental strand, 28315324 - 28315182
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  28315324 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 28315225  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  28315224 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 28315182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 13147180 - 13147301
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatccc-atgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttg 288  Q
    |||||||||| ||||| ||||| ||||| | |||| ||||| |||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  13147180 cttcaagaatatcccacagctcctcatctagtccccatgatgtagctgtacatgttggtttttcaccaagaaaactcttctggatctccattgaactttg 13147279  T
Q  289 gagcttttccagaatctgattt 310  Q
    ||||||||||||||||||||||    
T  13147280 gagcttttccagaatctgattt 13147301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 198 - 341
Target Start/End: Complemental strand, 16397104 - 16396961
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||| || |||||||||| |||||||||||||||||||||||| |||||  ||||||| |    
T  16397104 atgtcccatagctcttcatccaaacccatgataaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaagagctttac 16397005  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 341  Q
    |||| |||| |||  ||||||| |||||||| | ||||||||||    
T  16397004 cagagtctgttttcttgtcagcagtatcataatcatgtttgaca 16396961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 198 - 340
Target Start/End: Original strand, 39381835 - 39381977
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| || ||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  39381835 atgtcccataactcttcatctaatcccatgataaagttgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 39381934  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  39381935 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 39381977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 14312504 - 14312416
Alignment:
Q  192 tcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccatt 280  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  14312504 tcaagaatgtcccatagttcttcatccaaacccatgataaagctgtacatattggttttccaccatgaaaactcttctggatctccatt 14312416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 5211357 - 5211458
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||| |  |||| ||  ||||| | |||||||||||||   ||||| ||||| |||||||| |||||||||||| ||||||    
T  5211357 atgtcccatagctcttcatccaaacaaatgacatgactgtagaagttggttttccacaaggaaaattcttcaggatctccgttgaactttggaacttttc 5211456  T
Q  298 ca 299  Q
    ||    
T  5211457 ca 5211458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 301
Target Start/End: Original strand, 16031443 - 16031547
Alignment:
Q  197 aatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagctttt 296  Q
    |||||||||||| |||||||| || || ||||  |||||||| | ||||||||||||||  || || ||||| ||||||||||||||||| ||| ||||     
T  16031443 aatgtcccatagttcttcatctaaaccaatgacctagctgtagaagttggttttccaccaagagaattcttcaggatctccattgaacttaggaacttta 16031542  T
Q  297 ccaga 301  Q
    |||||    
T  16031543 ccaga 16031547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 2560133 - 2560234
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||| ||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||||||||||||| ||||||    
T  2560133 atgtctcatagttcttcatctaagcccatgacatgactataaaagttggtcttccaccaggaaaattcttcaggatctccattgaactttggaacttttc 2560232  T
Q  298 ca 299  Q
    ||    
T  2560233 ca 2560234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 295
Target Start/End: Complemental strand, 15960556 - 15960451
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| || ||||| || |||||||| |  || ||||| |||||||||||||  ||||| |||||  ||| |||||| ||||||||    
T  15960556 cttcaagaatatcccatagttcatcatctaaacccatgatgtgactatacatattggttttccaccaggaaaattcttcaagatttccattaaactttgg 15960457  T
Q  290 agcttt 295  Q
    ||||||    
T  15960456 agcttt 15960451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 53057933 - 53057832
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| | |||||| || ||||||| ||  ||||| | |||||| |||||||  ||||| ||| | ||||||||||||||||||||| ||||||    
T  53057933 atgtcccatagtttttcatctaagcccatgacatgactgtagaagttggtcttccaccaggaaaattctacaggatctccattgaactttggaacttttc 53057834  T
Q  298 ca 299  Q
    ||    
T  53057833 ca 53057832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 6183052 - 6183009
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacat 241  Q
    |||||||||| |||||||||||||||||||||| ||||||||||    
T  6183052 atgtcccataactcttcatccaatcccatgataaagctgtacat 6183009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 11188942 - 11189043
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||| |||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||||||||||||| || |||    
T  11188942 atgtcctatagttcttcatctaaacccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatctccattgaactttggaactcttc 11189041  T
Q  298 ca 299  Q
    ||    
T  11189042 ca 11189043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 12410926 - 12410861
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccacc 255  Q
    ||||||| || |||||||  |||||||| |||||||||||||| || ||||| |||||||||||||    
T  12410926 cttcaaggatatcccataattcttcatctaatcccatgatataactatacattttggttttccacc 12410861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 21639788 - 21639889
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||||||||||||| || ||||||| ||  || || | || |||||||||||| ||||| | |||  |||||||||| ||||| ||| ||||||    
T  21639788 atgtcccatagctcttcatctaaacccatgacatgactatagaagtgggttttccacccggaaaatttttcaagatctccattaaacttaggaacttttc 21639887  T
Q  298 ca 299  Q
    ||    
T  21639888 ca 21639889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 19886298 - 19886186
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || | ||||| ||  || || | |||||| |||||||  ||||| ||| | ||||||||||| ||||||||| ||||||    
T  19886298 atgtcccatagttcttcatctaaactcatgacatgactatagaagttggtattccaccaggaaaattctccaggatctccattaaactttggaacttttc 19886199  T
Q  298 cagaatctgattt 310  Q
    |||| || |||||    
T  19886198 cagagtcagattt 19886186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 297
Target Start/End: Complemental strand, 14078555 - 14078448
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||  || ||||  ||||| ||||| |  || ||||| |||||||||||||  ||||| ||||| |||| |||||| ||| ||||    
T  14078555 cttcaagaatatcccataattcatcatttaatccgatgatgtgactatacatattggttttccaccaggaaaattcttcaggatttccattaaaccttgg 14078456  T
Q  290 agcttttc 297  Q
    ||||||||    
T  14078455 agcttttc 14078448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 11221742 - 11221840
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcca 299  Q
    |||||||  |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| | ||||||||||||||||||| ||||||||    
T  11221742 tcccataattcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcagcatctccattgaactttggaacttttcca 11221840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 11222493 - 11222594
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||  |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| | ||||||||||||||||| | ||||||    
T  11222493 atgtcccataattcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcagcatctccattgaactttgaaacttttc 11222592  T
Q  298 ca 299  Q
    ||    
T  11222593 ca 11222594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 17240090 - 17240038
Alignment:
Q  258 gaaaactcttctggatctccattgaactttggagcttttccagaatctgattt 310  Q
    ||||| ||||| ||||||||||| ||||||||| |||||||||| || |||||    
T  17240090 gaaaattcttcaggatctccattaaactttggaacttttccagagtcagattt 17240038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 7e-65; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 28722432 - 28722247
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||     
T  28722432 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttga 28722333  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| | ||||||||| |||| ||||| ||||| ||||    
T  28722332 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacactattgtattttatagaagtagttgattcctctc 28722247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 26878774 - 26878959
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  26878774 cttcaagaatatcccatagttcttcatccaatctcatgatatagctgtacatattgattttccaccatgaaaactcttctggatctccattgaactttgg 26878873  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    ||||||||||||||||||||| || ||||  |||||||||| |||||||||| | ||||||||| |||||||||| ||||| ||||    
T  26878874 agcttttccagaatctgatttcctttcagtagtatcatagtcatgtttgacactattgtattttatagatgtagttgattcctctc 26878959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 24416140 - 24415955
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| || ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  24416140 cttcaagaatatcccatagttcatcatctaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 24416041  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  24416040 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 24415955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 43092385 - 43092544
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  43092385 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 43092484  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  43092485 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 43092544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 190 - 328
Target Start/End: Complemental strand, 24802765 - 24802627
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  24802765 cttcaagaatatcccacagctcctcatccaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 24802666  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcata 328  Q
    |||||||||||||||||||||  | ||||||||| ||||    
T  24802665 agcttttccagaatctgatttcttatcagctgtaacata 24802627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 10276696 - 10276852
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  10276696 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 10276795  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  10276796 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 10276852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 4219602 - 4219761
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  4219602 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 4219701  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  4219702 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 4219761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 9898679 - 9898520
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  9898679 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 9898580  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  9898579 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 9898520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 24328855 - 24328696
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  24328855 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 24328756  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  24328755 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 24328696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 29253926 - 29254085
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| || ||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  29253926 atgtcccatagctcttcatccaatcccatgataaagttgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 29254025  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  29254026 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 29254085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 11396275 - 11396122
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  11396275 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 11396176  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  11396175 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 11396122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 190 - 371
Target Start/End: Complemental strand, 19303542 - 19303361
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| | ||| ||||| ||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||||| ||    
T  19303542 cttcaagaatatcccacaactcctcatctaatcccatgatatagttgtacatgttgattttccaccaagaaaactcttctggatctccattgaacttcgg 19303443  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    |||||||||||||||||||||  ||||||| ||  |||||| |||  | |||||  ||||| ||||||||||||||||||||    
T  19303442 agcttttccagaatctgatttcttgtcagcagtgccatagtcatgactaacattagtgtatcttgtagatgtagtggattca 19303361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 39171197 - 39171041
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  39171197 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatatccattaaactttggagcttttccag 39171098  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  39171097 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 39171041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 43354139 - 43354295
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  43354139 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 43354238  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  43354239 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 43354295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 9763869 - 9763710
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  9763869 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactgttctggatctccattaaactttggagcttttc 9763770  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  9763769 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 9763710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 40250315 - 40250474
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||| ||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  40250315 atgtcccataactcttcatccaatctcatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 40250414  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  40250415 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 40250474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 22915963 - 22915807
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||| | || ||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  22915963 tcccatagctcttcatccaatcccatgaaaaagttgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 22915864  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  22915863 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 22915807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 34791323 - 34791164
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||| |||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  34791323 atgtctcataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaaccttggagcttttc 34791224  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  34791223 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 34791164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 190 - 363
Target Start/End: Original strand, 22773470 - 22773643
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||||    
T  22773470 cttcaagaatatcccacagctcttcatctaatcccatgatgtagctgtacatgttagtttttcaccaagaaaactcttctggatctccattgaactttgg 22773569  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtag 363  Q
    |||||||| ||||||||||||  ||||||  ||| |||| | ||   |||||||  ||||| ||||||||||||    
T  22773570 agcttttctagaatctgatttcttgtcagacgtaccataatcatagctgacattagtgtatcttgtagatgtag 22773643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Original strand, 35262710 - 35262852
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  35262710 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 35262809  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  35262810 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 35262852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Original strand, 35273335 - 35273477
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  35273335 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 35273434  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  35273435 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 35273477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 21163053 - 21162996
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccacc 255  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||    
T  21163053 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccacc 21162996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 190 - 295
Target Start/End: Original strand, 24843131 - 24843236
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||| ||||| ||||| || || ||||| ||||||||||| || || ||||| |||||||||||||  ||||| ||||| |||| ||||||||| |||||    
T  24843131 cttctagaatatcccacagttcatcatctaatcccatgatgtaactctacatattggttttccaccaagaaaattcttcaggatttccattgaattttgg 24843230  T
Q  290 agcttt 295  Q
    ||||||    
T  24843231 agcttt 24843236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 310
Target Start/End: Original strand, 25828094 - 25828206
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||| ||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||||||||||||||| ||||||||| ||||||    
T  25828094 atgtctcatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttctggatctccattaaactttggaacttttc 25828193  T
Q  298 cagaatctgattt 310  Q
    |||| || |||||    
T  25828194 cagagtcagattt 25828206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 296
Target Start/End: Complemental strand, 22782783 - 22782685
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagctttt 296  Q
    |||||||||||||||||||| || ||||||| ||  || || | ||||||||||||||  ||||| |||||  |||||||||| ||||| ||| |||||    
T  22782783 atgtcccatagctcttcatctaaacccatgacatgactttagaagttggttttccaccaggaaaattcttcaagatctccattaaacttaggaactttt 22782685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 22257134 - 22257233
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||| |||||||||| || ||||||    
T  22257134 atgtcccatagttcttcatctaaacccatgacatgactatagacgttggtcttccaccaggaaaattcttcaggatctctattgaactttagaacttttc 22257233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 20567201 - 20567259
Alignment:
Q  237 tacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttt 295  Q
    ||||| |||||||||||||  ||||| ||||| |||| |||||| ||||||||||||||    
T  20567201 tacatattggttttccaccacgaaaattcttcaggatttccattaaactttggagcttt 20567259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 219 - 374
Target Start/End: Complemental strand, 13226 - 13071
Alignment:
Q  219 aatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaatctgattttctgtcag 318  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13226 aatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttggagcttttccagaatctgatttcctgtcag 13127  T
Q  319 ctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 374  Q
    | |||||||||| |||||||||| | ||||||||||||||||||||| ||||||||    
T  13126 cagtatcatagtcatgtttgacactattgtattttgtagatgtagtgtattcatct 13071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 2e-62; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 17456357 - 17456542
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| ||| |||||||||||||    
T  17456357 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttctaccatgaaaactcttctgggtctgcattgaactttgg 17456456  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||| | ||||||||| |||| ||||| ||||| ||||    
T  17456457 agcttttccagaatctgattttctttcagcagtatcatagtcatgtttgacactattgtattttatagaagtagttgattcctctc 17456542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 20553032 - 20552847
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||    
T  20553032 cttcaagaatatcccatagttctttatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaacttcgg 20552933  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    |||||||||||||||| |||| || ||||| |||||||||| |||||||||| | ||||||||| |||| ||||| ||||| ||||    
T  20552932 agcttttccagaatctcatttcctttcagcagtatcatagtcatgtttgacactattgtattttatagaagtagttgattcctctc 20552847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 21705008 - 21705193
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||||||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  21705008 cttcaagaatatcccatagttcttcatccaatcccatgatatagttgtacatatttgttttccaccatgaaaactcttctggatctccattgaactttgg 21705107  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  21705108 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 21705193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 24982454 - 24982639
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  24982454 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 24982553  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    |||||||||||| |||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  24982554 agcttttccagagtctgatttcctttcagcagtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 24982639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 34053177 - 34052992
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  34053177 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 34053078  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    |||||||||||||||||| || || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  34053077 agcttttccagaatctgacttcctttcagcagtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 34052992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 23393626 - 23393441
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  |    
T  23393626 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaatttcag 23393527  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    |||||||||||| |||||||| || |||| ||||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  23393526 agcttttccagagtctgatttcctttcagttgtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 23393441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 1120954 - 1121113
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  1120954 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 1121053  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  1121054 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 1121113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 27621824 - 27621983
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  27621824 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 27621923  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  27621924 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 27621983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 39353705 - 39353546
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  39353705 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 39353606  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  39353605 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 39353546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 43620946 - 43621105
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||| |||||||||    
T  43620946 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttagagcttttc 43621045  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    ||||||||| |||  |||||||  ||||||||| |||||||||| |  ||||||||||||    
T  43621046 cagaatctgttttcttgtcagcattatcatagtcatgtttgacacttgtgtattttgtag 43621105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 198 - 375
Target Start/End: Complemental strand, 19465181 - 19465004
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19465181 atgtcacatagctcttcatccaaacccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 19465082  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    |||| |||| |||  ||||||| |||||||||| || ||||||| |  ||||||||||||| ||||| ||||| ||||    
T  19465081 cagagtctgttttcttgtcagcagtatcatagtcatatttgacacttgtgtattttgtagaagtagttgattcctctc 19465004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 6977012 - 6976856
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  6977012 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 6976913  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  6976912 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 6976856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 9337160 - 9337004
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  9337160 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 9337061  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  9337060 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 9337004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 14031248 - 14031092
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  14031248 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 14031149  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  14031148 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 14031092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 22677322 - 22677166
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  22677322 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 22677223  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  22677222 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 22677166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 23297483 - 23297327
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  23297483 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 23297384  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  23297383 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 23297327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 23363316 - 23363160
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  23363316 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 23363217  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  23363216 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 23363160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 24568294 - 24568138
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24568294 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 24568195  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  24568194 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 24568138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 24826530 - 24826686
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24826530 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 24826629  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  24826630 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 24826686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 34773115 - 34772959
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  34773115 tcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 34773016  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  34773015 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 34772959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 35216709 - 35216553
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  35216709 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 35216610  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  35216609 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 35216553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 36592172 - 36592328
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36592172 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 36592271  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  36592272 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 36592328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 37739622 - 37739778
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  37739622 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 37739721  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  37739722 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 37739778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 5300194 - 5300353
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  5300194 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttattttccaccatgaaaactcttctggatctccattaaactttggagcttttc 5300293  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5300294 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacactagtgtattttgtag 5300353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 31834689 - 31834530
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  31834689 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 31834590  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  31834589 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 31834530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 40391567 - 40391408
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  40391567 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 40391468  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  40391467 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 40391408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Original strand, 14456667 - 14456820
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  14456667 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 14456766  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  14456767 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 14456820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Original strand, 14567708 - 14567861
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  14567708 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 14567807  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  14567808 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 14567861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 15741175 - 15741022
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  15741175 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 15741076  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  15741075 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 15741022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 16002948 - 16003107
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| || ||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  16002948 atgtcccataactcttcatccaatcccatgataaagttgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 16003047  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  16003048 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 16003107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 190 - 371
Target Start/End: Original strand, 23487478 - 23487659
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||     
T  23487478 cttcaagaatatcccacagctcctcatctaatcccatgatgtagctgtacatgttggttttccagcaagaaaactcttctagatctccattgaactttga 23487577  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    |||||||||||||||||||||  ||||||| ||| |||| | ||||   |||||  ||||| ||||||||||| ||||||||    
T  23487578 agcttttccagaatctgatttcttgtcagcagtaccataatcatgtgcaacattagtgtatcttgtagatgtactggattca 23487659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 204 - 357
Target Start/End: Complemental strand, 24809119 - 24808966
Alignment:
Q  204 catagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaat 303  Q
    ||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |    
T  24809119 catagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccagagt 24809020  T
Q  304 ctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    ||| |||  ||||||| ||||||| || ||| |||||| |  ||||||||||||    
T  24809019 ctgttttcttgtcagcagtatcatcgtcatgcttgacacttgtgtattttgtag 24808966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 27461368 - 27461215
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    ||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  27461368 tcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 27461269  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  27461268 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 27461215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 22147725 - 22147566
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  22147725 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggaggttttc 22147626  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  |||||||  ||||||||| ||| |||||| |  ||||||||||||    
T  22147625 cagagtctgttttcttgtcagcaatatcatagtcatgcttgacacttgtgtattttgtag 22147566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 198 - 375
Target Start/End: Complemental strand, 31419874 - 31419697
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| || |||||||||| |||||||||||||||||||||||| |||||| ||||||| |    
T  31419874 atgtcccatagctcttcatccaatcccatgataaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttttgagctttac 31419775  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
     ||| |||| |||  ||||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  31419774 tagagtctgttttcttgtcagccgtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 31419697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 198 - 354
Target Start/End: Complemental strand, 17608271 - 17608115
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  17608271 atgtcccataactcttcatctaatcccatgataaagctgtacatattggttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 17608172  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  17608171 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 17608115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 25113115 - 25112995
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||    
T  25113115 cttcaagaatatcccacagctcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagagaactcttcaggatctccattgaactttgg 25113016  T
Q  290 agcttttccagaatctgattt 310  Q
    |||||||||||| ||||||||    
T  25113015 agcttttccagagtctgattt 25112995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 25172206 - 25172086
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||    
T  25172206 cttcaagaatatcccacagctcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagagaactcttcaggatctccattgaactttgg 25172107  T
Q  290 agcttttccagaatctgattt 310  Q
    |||||||||||| ||||||||    
T  25172106 agcttttccagagtctgattt 25172086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 11209212 - 11209077
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| || || ||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  11209212 cttcaagaatatcccacagttcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttcaggatctccattgaactttgg 11209113  T
Q  290 agcttttccagaatctgattttctgtcagctgtatc 325  Q
    |||||||| ||| ||||||||  |||||| ||||||    
T  11209112 agcttttctagagtctgatttcttgtcagttgtatc 11209077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 190 - 371
Target Start/End: Original strand, 13532912 - 13533093
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| || ||||| ||||| ||||| ||||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||| ||||     
T  13532912 cttcaaggatatcccacagctcctcatctaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctggatctccattgaattttga 13533011  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    |||||||||||||||||||||  |||||| |||| |||| | |||     ||||  ||||| ||||||||||||||||||||    
T  13533012 agcttttccagaatctgatttcttgtcagatgtaccataatcatgaccagcattagtgtatcttgtagatgtagtggattca 13533093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 198 - 354
Target Start/End: Complemental strand, 17720127 - 17719971
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  17720127 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 17720028  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  17720027 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 17719971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 198 - 354
Target Start/End: Complemental strand, 31349743 - 31349587
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  31349743 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 31349644  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  31349643 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 31349587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 198 - 354
Target Start/End: Complemental strand, 36688907 - 36688751
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  36688907 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 36688808  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  36688807 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 36688751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Complemental strand, 23697989 - 23697847
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  23697989 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 23697890  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  23697889 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 23697847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Original strand, 27051889 - 27052031
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  27051889 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 27051988  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  27051989 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 27052031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Original strand, 30237078 - 30237220
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  30237078 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 30237177  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  30237178 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 30237220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Complemental strand, 42043989 - 42043847
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  42043989 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 42043890  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  42043889 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 42043847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 201 - 294
Target Start/End: Original strand, 39500542 - 39500635
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagctt 294  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||    
T  39500542 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagctt 39500635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 31144510 - 31144398
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||| ||||| ||| ||||||    
T  31144510 atgtcccatagttcttcatctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattaaacttaggaacttttc 31144411  T
Q  298 cagaatctgattt 310  Q
    |||| || |||||    
T  31144410 cagagtcagattt 31144398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 26764402 - 26764503
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||||||||||||| || |  |||| ||  ||||| | ||||||||||||||  ||||| || || ||||||||||||||||||||| ||||||    
T  26764402 atgtcccatagctcttcatcaaaacaaatgacatgactgtagaagttggttttccaccaggaaaattcatcaggatctccattgaactttggaacttttc 26764501  T
Q  298 ca 299  Q
    ||    
T  26764502 ca 26764503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 310
Target Start/End: Original strand, 26783332 - 26783444
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||||  ||||||| || ||||||| ||  || || | |||||| ||||||| |||||| ||||| ||||||||||||||||||||| ||||||    
T  26783332 atgtcccatagtacttcatctaaacccatgacatgactatagaagttggtcttccaccatgaaaattcttcaggatctccattgaactttggaacttttc 26783431  T
Q  298 cagaatctgattt 310  Q
     ||| || |||||    
T  26783432 tagagtcagattt 26783444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 21200219 - 21200099
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| |||||||| || |||||| | || ||||||| ||  || || | ||||||||||||||  ||||| ||||| ||||||||||| ||||||||    
T  21200219 cttcaagtatgtcccagagttcttcacctaaacccatgacatgactatagaagttggttttccaccaagaaaattcttcaggatctccattaaactttgg 21200120  T
Q  290 agcttttccagaatctgattt 310  Q
      |||| ||||| || |||||    
T  21200119 gactttaccagagtcagattt 21200099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 8902 - 8717
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||||||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  8902 cttcaagaatatcccatagttcttcatccaatcccatgatatagttgtacatatttgttttccaccatgaaaactcttctggatctccattgaactttgg 8803  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  8802 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 8717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 198 - 375
Target Start/End: Complemental strand, 7690597 - 7690420
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  7690597 atgtcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaattttggagcttttc 7690498  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    |||| |||||||| || |||||||||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  7690497 cagagtctgatttcctttcagctgtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 7690420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 5640838 - 5640679
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  5640838 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 5640739  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5640738 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 5640679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 3181297 - 3181453
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  3181297 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 3181396  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  3181397 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 3181453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 5842900 - 5843056
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  5842900 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 5842999  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5843000 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 5843056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 7516980 - 7517136
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  7516980 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 7517079  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  7517080 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 7517136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 38104781 - 38104937
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  38104781 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 38104880  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  38104881 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 38104937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 4176995 - 4177154
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  4176995 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 4177094  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  4177095 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 4177154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 12615451 - 12615292
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  12615451 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 12615352  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  12615351 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 12615292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 198 - 355
Target Start/End: Original strand, 21876841 - 21876998
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  21876841 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 21876940  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgt 355  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||    
T  21876941 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgt 21876998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 47609061 - 47608908
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  47609061 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 47608962  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  47608961 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 47608908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 12740221 - 12740380
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  12740221 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctgcatctccattaaactttggagcttttc 12740320  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  12740321 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 12740380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 19186901 - 19187058
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||| ||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  19186901 tcccatagctattcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 19187000  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgaca-ttgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| ||||  ||||||||||    
T  19187001 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgttattttgtag 19187058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 190 - 371
Target Start/End: Original strand, 22018249 - 22018430
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||     
T  22018249 cttcaagaatatcccacagctcatcatcaaatcccatgatgtagctgtacatgttggttttccaacaagaaaactcttctagatctccattgaactttga 22018348  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    |||||||||||||||||||||  ||||||| ||| |||| | ||||   |||||  ||||| ||||||||||| ||||||||    
T  22018349 agcttttccagaatctgatttcttgtcagcagtaccataatcatgtgcaacattagtgtatcttgtagatgtactggattca 22018430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 38094155 - 38094312
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  38094155 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 38094254  T
Q  301 aatctgattttctgtcagc-tgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  |||||||  |||||||||| ||| |||||| |  ||||||||||||    
T  38094255 agtctgttttcttgtcagcaagtatcatagtcatgcttgacacttgtgtattttgtag 38094312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 198 - 340
Target Start/End: Complemental strand, 35639166 - 35639024
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  35639166 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 35639067  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  35639066 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 35639024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Complemental strand, 36237558 - 36237416
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  36237558 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 36237459  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  36237458 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 36237416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Complemental strand, 51630320 - 51630178
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  51630320 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 51630221  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  51630220 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 51630178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 20874361 - 20874280
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctgg 271  Q
    |||||||||| || || ||||||||||| ||||||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  20874361 cttcaagaatatctcacagctcttcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctgg 20874280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 45985770 - 45985681
Alignment:
Q  12 cagcaagagctataaaaggagaggaaacagtcaatgaacaaaa-ttagttacagattaagcactgccagatattcaacattccaaaaaag 100  Q
    |||||||||||| |||| || ||||||||||| |||||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||    
T  45985770 cagcaagagctacaaaaagaaaggaaacagtcgatgaacaaaaattagatacagattaagcgctgccagatattcaatattccaaaaaag 45985681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 299
Target Start/End: Original strand, 23023802 - 23023911
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||   |||| | ||||||||||||||  ||||| ||||| ||||||||||| ||||||||    
T  23023802 cttcaagtatgtcccatagttcttcatctaaacccatgacatgattgtagaagttggttttccaccaagaaaattcttcaggatctccattaaactttgg 23023901  T
Q  290 agcttttcca 299  Q
    | ||||||||    
T  23023902 aacttttcca 23023911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 190 - 295
Target Start/End: Original strand, 18613845 - 18613950
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||| || ||||||| |||  |||| | ||||||||||||||  || || ||||| ||||||||||| ||||||||    
T  18613845 cttcaagaatatcccatagttcttcatctaaacccatgacataattgtagaagttggttttccaccaagagaattcttcaggatctccattaaactttgg 18613944  T
Q  290 agcttt 295  Q
    | ||||    
T  18613945 aacttt 18613950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 22431249 - 22431148
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  ||||| | |||||| |||||||  ||||| ||||| |||||| |||||||||||||| ||||||    
T  22431249 atgtcccatagttcttcatctaagcccatgacatgactgtagaagttggtcttccaccaggaaaattcttcaggatcttcattgaactttggaacttttc 22431150  T
Q  298 ca 299  Q
    ||    
T  22431149 ca 22431148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 21125505 - 21125404
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||   |||| | ||||||||||||||  ||||| ||||| ||||||||||| |||||  || ||||||    
T  21125505 atgtcccatagttcttcatctaaacccatgacatgattgtagaagttggttttccaccaggaaaattcttcaggatctccattaaacttatgaacttttc 21125406  T
Q  298 ca 299  Q
    ||    
T  21125405 ca 21125404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 112; Significance: 2e-56; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 190 - 341
Target Start/End: Complemental strand, 34040 - 33889
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  34040 cttcaagaatatcccatagttcttcatcaaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctagatctccattgaactttgg 33941  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgaca 341  Q
    ||||||||||||||||||||| || ||||| |||||||||| ||||||||||    
T  33940 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgaca 33889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 41577 - 41418
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  41577 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttttggatctccattaaactttggagcttttc 41478  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  41477 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 41418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 190 - 341
Target Start/End: Complemental strand, 14837206 - 14837055
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  14837206 cttcaagaatatcccatagttcttcatcaaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctagatctccattgaactttgg 14837107  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgaca 341  Q
    ||||||||||||||||||||| || ||||| |||||||||| ||||||||||    
T  14837106 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgaca 14837055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 190 - 341
Target Start/End: Original strand, 16316484 - 16316635
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  16316484 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccacgaaaactcttctggatctccattgaactttgg 16316583  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgaca 341  Q
    ||||||||||||||||||||| || ||||| |||||||||| ||||||||||    
T  16316584 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgaca 16316635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 190 - 352
Target Start/End: Original strand, 3389605 - 3389767
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||| | || ||||| |||||||||||||||||||||||| ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||    
T  3389605 cttcaagattatctcatagttcttcatccaatcccatgatatagttgtacatattggttttccaccataaaaactcttctggatctccattgaactttgg 3389704  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattt 352  Q
    ||||||||||||||||||||| || |||||  ||||||||| |||||||||| | ||||||||    
T  3389705 agcttttccagaatctgatttcctttcagcaatatcatagtcatgtttgacactattgtattt 3389767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 19945428 - 19945269
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19945428 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 19945329  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  19945328 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 19945269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 27816036 - 27815877
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  27816036 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 27815937  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  27815936 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 27815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 190 - 371
Target Start/End: Complemental strand, 14711921 - 14711740
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| | ||| ||||| ||||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  14711921 cttcaagaatatcccacaactcctcatctaatcccatgatgtagctgtacatattggttttccaccaagaaaactcttctggatctccattgaactttgg 14711822  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    |||||||||||||||||||||  ||||||| ||| |||||| ||||   |||||  ||||| ||||||||||| ||||||||    
T  14711821 agcttttccagaatctgatttcttgtcagcagtaccatagtcatgtccaacattagtgtatcttgtagatgtactggattca 14711740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 18131336 - 18131180
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  18131336 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 18131237  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  18131236 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 18131180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 36028059 - 36028215
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36028059 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 36028158  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  36028159 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 36028215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 55746339 - 55746183
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  55746339 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 55746240  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  55746239 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 55746183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 460328 - 460487
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  460328 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 460427  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  460428 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 460487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 22006182 - 22006341
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  22006182 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 22006281  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  22006282 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 22006341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 27175839 - 27175998
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  27175839 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 27175938  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  27175939 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 27175998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 30927583 - 30927424
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  30927583 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 30927484  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  30927483 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 30927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 10741685 - 10741532
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  10741685 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 10741586  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  10741585 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 10741532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Complemental strand, 10955454 - 10955301
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  10955454 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 10955355  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  10955354 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 10955301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 201 - 354
Target Start/End: Original strand, 27666341 - 27666494
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  27666341 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 27666440  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  27666441 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 27666494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 16265633 - 16265789
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    ||||||||||| |||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  16265633 tcccatagctcgtcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 16265732  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  16265733 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 16265789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 14844742 - 14844583
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  14844742 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttttggatctccattaaactttggagcttttc 14844643  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  14844642 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 14844583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Original strand, 17927864 - 17928023
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  17927864 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatgtccattaaactttggagcttttc 17927963  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  17927964 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 17928023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 40455450 - 40455291
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||| |||||||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  40455450 atgtcctatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatgtccattaaactttggagcttttc 40455351  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  40455350 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 40455291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 201 - 375
Target Start/End: Original strand, 5021904 - 5022078
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||| ||||| || |||||||||| ||||||||||||||| |||||||| |||||||||||||| ||||    
T  5021904 tcccatagctcttcatccaatcccatgataaagctatacatatttgttttccaccatgaaaactcttctgggtctccattaaactttggagctttaccag 5022003  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 375  Q
    | |||| |||  ||||||| |||||||||| |||||||||| |  |||||||| | |||||||| ||||| ||||    
T  5022004 agtctgttttcttgtcagccgtatcatagtcatgtttgacacttgtgtattttatggatgtagttgattcttctc 5022078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 190 - 328
Target Start/End: Complemental strand, 16820456 - 16820318
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |    
T  16820456 cttcaagaatatcccacagctcctcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttag 16820357  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcata 328  Q
    |||||||||||||||| ||||  |||||| |||| ||||    
T  16820356 agcttttccagaatctaatttcttgtcagatgtaccata 16820318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 198 - 354
Target Start/End: Complemental strand, 18753580 - 18753424
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  18753580 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 18753481  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 354  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| | ||||||||||    
T  18753480 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacactcttgtattttg 18753424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 198 - 340
Target Start/End: Original strand, 49517302 - 49517444
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  49517302 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 49517401  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgac 340  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  49517402 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 49517444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 198 - 341
Target Start/End: Original strand, 18065739 - 18065882
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||| ||||||||  |||| ||||| || |||||||||| |||||||||||||||||||||||| ||||| |||||||| |    
T  18065739 atgtcccatagctcttcatccaaacccatgatgaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaggagctttac 18065838  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 341  Q
    |||| |||| |||  ||||||| |||||||||| ||| ||||||    
T  18065839 cagagtctgttttcttgtcagccgtatcatagtcatgcttgaca 18065882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 11470428 - 11470505
Alignment:
Q  192 tcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttct 269  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  11470428 tcaagaatgtcccatagttcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttct 11470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 17246516 - 17246617
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    |||| |||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||||||||| ||||||||||||||||||||| ||||||    
T  17246516 atgttccatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaactcttcaggatctccattgaactttggaacttttc 17246615  T
Q  298 ca 299  Q
    ||    
T  17246616 ca 17246617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 4988882 - 4988828
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccacc 255  Q
    |||||||||||||||||||||||||||||| |||| ||||| || ||||||||||    
T  4988882 tcccatagctcttcatccaatcccatgataaagctatacatatttgttttccacc 4988828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 10662318 - 10662242
Alignment:
Q  234 ctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaatctgattt 310  Q
    ||||||||||||||||||||||  || || ||||  |||||||| || |||||||||||||||||||| || |||||    
T  10662318 ctgtacatgttggttttccaccaagagaattctttaggatctccgttaaactttggagcttttccagagtcagattt 10662242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 10876463 - 10876387
Alignment:
Q  234 ctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaatctgattt 310  Q
    ||||||||||||||||||||||  || || ||||  |||||||| || |||||||||||||||||||| || |||||    
T  10876463 ctgtacatgttggttttccaccaagagaattctttaggatctccgttaaactttggagcttttccagagtcagattt 10876387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 38081 - 37925
Alignment:
Q  201 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 300  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  38081 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 37982  T
Q  301 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  37981 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 37925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 190 - 371
Target Start/End: Complemental strand, 2196 - 2015
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||| |||| ||||| ||||| ||||| ||||||||||| ||| |||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  2196 cttcaggaatatcccacagctcctcatctaatcccatgatgtagttgtaaatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 2097  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    |||||||||||||||||||||  ||||||| ||| |||||| ||||   |||||  ||||| ||||||||||| ||||||||    
T  2096 agcttttccagaatctgatttcttgtcagcagtaccatagtcatgtccaacattagtgtatcttgtagatgtactggattca 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 190 - 371
Target Start/End: Complemental strand, 41527 - 41346
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| ||| |||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  41527 cttcaagaatatcccacagctcctcatctaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctgtatctccattgaactttgg 41428  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 371  Q
    |||||||||||||||||||||  ||||||| ||| |||||| ||||   |||||  ||||| ||||||||| | ||||||||    
T  41427 agcttttccagaatctgatttcatgtcagcagtaccatagtcatgtccaacattagtgtatcttgtagatgaactggattca 41346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 92; Significance: 1e-44; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 44884 - 44725
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || |||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  44884 atgtctcatagctcttcatccaatcccatgataaagctgtacatatttgttttccaacatgaaaactcttctggatctccattaaactttggagcttttc 44785  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 357  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  44784 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 44725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 36377 - 36478
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| |||| |||||||||||||||| ||||||    
T  36377 atgtcccatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatatccattgaactttggaacttttc 36476  T
Q  298 ca 299  Q
    ||    
T  36477 ca 36478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 134437 - 134538
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| |||| |||||||||||||||| ||||||    
T  134437 atgtcccatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatatccattgaactttggaacttttc 134536  T
Q  298 ca 299  Q
    ||    
T  134537 ca 134538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 158070 - 158168
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttg 288  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||  || || | ||||||||||||||  || || ||||| ||||||||||| |||||||    
T  158070 cttcaagtatgtcccatagttcttcatctaaacccatgacatgactatagaagttggttttccaccaagagaattcttcaggatctccattaaactttg 158168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 190 - 328
Target Start/End: Complemental strand, 2427 - 2289
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  2427 cttcaagaatatcccacagctcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 2328  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcata 328  Q
    || ||||| ||||||||||||  | ||||||||| ||||    
T  2327 agattttctagaatctgatttcttatcagctgtaccata 2289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 190 - 328
Target Start/End: Complemental strand, 11467 - 11329
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||| |||| ||||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  11467 cttcaggaatatcccatagctcctcatctaatcccatgatgtagatgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 11368  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcata 328  Q
    |||||||||||||||||||||  ||||||| ||| ||||    
T  11367 agcttttccagaatctgatttcttgtcagcagtaccata 11329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1820 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold1820
Description:

Target: scaffold1820; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 190 - 323
Target Start/End: Original strand, 562 - 695
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| | ||||||||||||||||||    
T  562 cttcaagaatatcccacaactcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttcagaatctccattgaactttgg 661  T
Q  290 agcttttccagaatctgattttctgtcagctgta 323  Q
    |||||||||||||||||||||  | |||||||||    
T  662 agcttttccagaatctgatttcttatcagctgta 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1507 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold1507
Description:

Target: scaffold1507; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 328
Target Start/End: Complemental strand, 517 - 379
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||||||||| | ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  517 cttcaagaatatcccacagctcttcatctattcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 418  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcata 328  Q
    |||||| | ||||||||||||  | ||||||||| ||||    
T  417 agctttgctagaatctgatttcttatcagctgtaccata 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 165839 - 165719
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| |||||| |||||| |||||||||||  ||||||||||| ||||||||||||||||||||    
T  165839 cttcaagaatatcccacagctcatcatctaatcccatgatgtagctgcacatgtcggttttccaccaagaaaactcttcaggatctccattgaactttgg 165740  T
Q  290 agcttttccagaatctgattt 310  Q
    |||||||||||||||||||||    
T  165739 agcttttccagaatctgattt 165719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 66538 - 66481
Alignment:
Q  242 gttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcca 299  Q
    ||||||||||||||  ||||| ||||| ||||||||||| ||||||||| ||| ||||    
T  66538 gttggttttccaccaggaaaattcttcaggatctccattaaactttggaacttctcca 66481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 328
Target Start/End: Complemental strand, 683 - 545
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||| ||| ||||| ||||| ||||||| ||||||||| |||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||    
T  683 cttcaataatatcccacagctcatcatccagtcccatgatgtagctgtacatgttggttttccaccaagaaaactcttcaagatctccattgaactttgg 584  T
Q  290 agcttttccagaatctgattttctgtcagctgtatcata 328  Q
    |||||||| ||| ||||||||  | ||||||||| ||||    
T  583 agcttttctagagtctgatttcttatcagctgtaccata 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 198 - 341
Target Start/End: Complemental strand, 52864 - 52721
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||| ||||||||  |||| ||||| || |||||||||| |||||||||||||||||||||||| |||||  ||||||| |    
T  52864 atgtcccatagctcttcatccaaacccatgatgaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaagagctttac 52765  T
Q  298 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 341  Q
     ||| |||| |||  ||||||| |||||||||| ||| ||||||    
T  52764 aagagtctgttttcttgtcagccgtatcatagtcatgcttgaca 52721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 190 - 300
Target Start/End: Complemental strand, 11282 - 11172
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||||||||| | ||||||||||||||  ||||| ||||| ||||||||||||||||| ||    
T  11282 cttcaagtatgtcccatagttcttcatctaaccccatgacatagctgtagaagttggttttccaccaagaaaattcttcaggatctccattgaacttagg 11183  T
Q  290 agcttttccag 300  Q
    | |||||||||    
T  11182 aacttttccag 11172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 190 - 300
Target Start/End: Complemental strand, 15955 - 15845
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||||||||| | ||||||||||||||  ||||| ||||| ||||||||||||||||| ||    
T  15955 cttcaagtatgtcccatagttcttcatctaaccccatgacatagctgtagaagttggttttccaccaagaaaattcttcaggatctccattgaacttagg 15856  T
Q  290 agcttttccag 300  Q
    | |||||||||    
T  15855 aacttttccag 15845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 110765 - 110653
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||||||||||||| ||||||| ||  ||||| | ||||||||||||||   |||| ||||| ||||||||||||||||||||| ||||||    
T  110765 atgtcccatagctcttcatccaaacccatgacatgactgtataagttggttttccaccagaaaaattcttcaggatctccattgaactttggaacttttc 110666  T
Q  298 cagaatctgattt 310  Q
    || | ||||||||    
T  110665 catagtctgattt 110653  T

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Target: scaffold0116 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 303
Target Start/End: Complemental strand, 22110 - 21997
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| ||||| ||||| |||||||| || ||||||| |||| |||| | ||||||||||||||  ||||| ||||| |||||||||||||||||  |    
T  22110 cttcaagtatgtctcatagttcttcatctaaacccatgacatagatgtagaagttggttttccaccaagaaaattcttcaggatctccattgaacttaag 22011  T
Q  290 agcttttccagaat 303  Q
    | ||||||||||||    
T  22010 aacttttccagaat 21997  T

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Target: scaffold0315 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 310
Target Start/End: Original strand, 7600 - 7720
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||  || || | ||||||||||||||  ||||| ||||| ||||||||||| ||||||||    
T  7600 cttcaagtatgtcccatagttcttcatctaaacccatgacatgactatagaagttggttttccaccaggaaaattcttcaggatctccattaaactttgg 7699  T
Q  290 agcttttccagaatctgattt 310  Q
    | |||||||||| || |||||    
T  7700 aacttttccagagtcagattt 7720  T

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Target: scaffold0439 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 7867 - 7766
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  ||||| | |||||| |||||||  ||||| ||||| ||||||||||||||||||||| ||||||    
T  7867 atgtcccatagttcttcatctaaacccatgacatgactgtagaagttggtcttccaccaggaaaattcttcaggatctccattgaactttggaacttttc 7768  T
Q  298 ca 299  Q
    ||    
T  7767 ca 7766  T

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Target: scaffold0113 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 190 - 299
Target Start/End: Original strand, 2128 - 2237
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||  || || | ||||||||||||||  || || ||||| ||||||||||| ||||||||    
T  2128 cttcaagtatgtcccatagttcttcatctaaacccatgacatgactatagaagttggttttccaccaagagaattcttcaggatctccattaaactttgg 2227  T
Q  290 agcttttcca 299  Q
    | ||||||||    
T  2228 aacttttcca 2237  T

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Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 210346 - 210447
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||||| |||||| || ||||||| ||  ||||| | ||||||||||||||  ||||| |||||  ||||||| |||||||||||| ||||||    
T  210346 atgtcccatagcttttcatctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaagatctccgttgaactttggaacttttc 210445  T
Q  298 ca 299  Q
    ||    
T  210446 ca 210447  T

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Target: scaffold0317 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 310
Target Start/End: Original strand, 11557 - 11669
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||| ||||||||| ||||||    
T  11557 atgtcccatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatctccattaaactttggaacttttc 11656  T
Q  298 cagaatctgattt 310  Q
    |||| || |||||    
T  11657 cagagtcagattt 11669  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 98732 - 98631
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||| ||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||||||||||||| ||||||    
T  98732 atgtctcatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatctccattgaactttggaacttttc 98633  T
Q  298 ca 299  Q
    ||    
T  98632 ca 98631  T

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Target: scaffold0498 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 290
Target Start/End: Complemental strand, 1364 - 1264
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||||||||| || |||||||| || || |||| ||| ||||| | ||||||||||||||  || || |||||  |||||||||| ||||||||    
T  1364 cttcaagaatgtcccaaagttcttcatctaaaccaatgacataactgtagaagttggttttccaccaagagaaatcttcaagatctccattaaactttgg 1265  T
Q  290 a 290  Q
    |    
T  1264 a 1264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 6888 - 6787
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||   |||| |||||  |||||||||||||||||||| ||||||    
T  6888 atgtcccatagttcttcatctaaacccatgacatgactatagaagttggtcttccaccagaaaaattcttcaagatctccattgaactttggaacttttc 6789  T
Q  298 ca 299  Q
    ||    
T  6788 ca 6787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 26814 - 26713
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| |||||||| || || |||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||| |||||  || ||||||    
T  26814 atgtcccatagttcttcatctaaacctatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattaaacttatgaacttttc 26715  T
Q  298 ca 299  Q
    ||    
T  26714 ca 26713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 76191 - 76302
Alignment:
Q  190 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 289  Q
    |||||||||| |||||  | | |||||| || |||| ||| ||  |||||||||||||||||||||  || || ||||  ||||||||||| ||||||||    
T  76191 cttcaagaatatcccacggtttttcatctaaacccacgatgtaattgtacatgttggttttccaccaagagaattctttaggatctccattaaactttgg 76290  T
Q  290 agcttttccaga 301  Q
    || ||| |||||    
T  76291 aggtttgccaga 76302  T

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Target: scaffold0217 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 18006 - 18107
Alignment:
Q  198 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 297  Q
    ||||||||||| || ||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||| ||||||| | ||||||    
T  18006 atgtcccatagttcatcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatctccattcaactttgtaacttttc 18105  T
Q  298 ca 299  Q
    ||    
T  18106 ca 18107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 310
Target Start/End: Complemental strand, 19774 - 19706
Alignment:
Q  242 gttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaatctgattt 310  Q
    |||||| |||||||   |||| ||||| |||||||| |||||||||||| |||||||||| || |||||    
T  19774 gttggtcttccaccagaaaaattcttcaggatctcctttgaactttggaacttttccagagtcagattt 19706  T

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Target: scaffold0146 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 14110 - 14162
Alignment:
Q  258 gaaaactcttctggatctccattgaactttggagcttttccagaatctgattt 310  Q
    ||||| ||||| ||||||||||| ||||||||| |||||||||| || |||||    
T  14110 gaaaattcttcaggatctccattaaactttggaacttttccagagtcagattt 14162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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