View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0784_high_37 (Length: 365)
Name: NF0784_high_37
Description: NF0784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0784_high_37 |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 93 - 355
Target Start/End: Original strand, 2486683 - 2486945
Alignment:
| Q |
93 |
atgttgcacttgctagcagcagtatatataagactggatatacgcttctgttaaccgggtggtctgttacaaccgtaagtagggcaagttgaaacataaa |
192 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |
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| T |
2486683 |
atgttgcacttgctagcagcagtatatataagactggatatacgcttctgttaaccgggtggtctgttacaactgcaagtagggcaagttgaaacataaa |
2486782 |
T |
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| Q |
193 |
agcataaccaacgagaaggacgaagatgattgtgccatgtattgccattgcttcagcagcatcgatcgatgatatctttagtgccataaagagaaaatgt |
292 |
Q |
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||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |
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| T |
2486783 |
agcataaccaatgagaaggactgagatgattgtgttatgtattgccattgcttcagcagcatcgattgatgatatctttagtgccatgaagagaaaatgt |
2486882 |
T |
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| Q |
293 |
agcgagcataaacatatcgaatacttgactacttcctttaacctttgtttgtccatatctgtg |
355 |
Q |
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||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
2486883 |
agcaagcataaacatattgaatactttgctacttcctttaacctttgtttgtccatatctgtg |
2486945 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 93 - 355
Target Start/End: Original strand, 27089269 - 27089531
Alignment:
| Q |
93 |
atgttgcacttgctagcagcagtatatataagactggatatacgcttctgttaaccgggtggtctgttacaaccgtaagtagggcaagttgaaacataaa |
192 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |
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| T |
27089269 |
atgttgcacttgctagcagcagtatatataagactggatatacgcttctgttaaccgggtggtctgttacaactgcaagtagggcaagttgaaacataaa |
27089368 |
T |
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| Q |
193 |
agcataaccaacgagaaggacgaagatgattgtgccatgtattgccattgcttcagcagcatcgatcgatgatatctttagtgccataaagagaaaatgt |
292 |
Q |
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||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |
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| T |
27089369 |
agcataaccaatgagaaggactgagatgattgtgttatgtattgccattgcttcagcagcatcgattgatgatatctttagtgccatgaagagaaaatgt |
27089468 |
T |
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| Q |
293 |
agcgagcataaacatatcgaatacttgactacttcctttaacctttgtttgtccatatctgtg |
355 |
Q |
| |
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||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
27089469 |
agcaagcataaacatattgaatactttgctacttcctttaacctttgtttgtccatatctgtg |
27089531 |
T |
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