View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0786_low_18 (Length: 355)

Name: NF0786_low_18
Description: NF0786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0786_low_18
NF0786_low_18
[»] chr1 (67 HSPs)
chr1 (30-304)||(23045285-23045559)
chr1 (30-301)||(40783663-40783934)
chr1 (30-304)||(284330-284604)
chr1 (30-309)||(47037858-47038135)
chr1 (184-302)||(321625-321743)
chr1 (186-302)||(24772067-24772183)
chr1 (30-157)||(321770-321897)
chr1 (186-300)||(27211126-27211240)
chr1 (30-155)||(23526385-23526510)
chr1 (30-158)||(27210961-27211089)
chr1 (186-294)||(46771644-46771752)
chr1 (186-301)||(23526240-23526355)
chr1 (30-158)||(24771912-24772040)
chr1 (30-158)||(33082887-33083015)
chr1 (186-281)||(33082765-33082860)
chr1 (30-158)||(46771781-46771909)
chr1 (31-155)||(40562293-40562416)
chr1 (59-158)||(40261320-40261419)
chr1 (34-158)||(31003797-31003921)
chr1 (34-158)||(51064764-51064888)
chr1 (186-286)||(52037284-52037382)
chr1 (193-305)||(51064925-51065037)
chr1 (248-303)||(41959076-41959131)
chr1 (193-303)||(1749305-1749415)
chr1 (248-301)||(3943060-3943113)
chr1 (248-301)||(9588670-9588723)
chr1 (30-158)||(18396837-18396965)
chr1 (31-158)||(27143021-27143146)
chr1 (61-157)||(40052501-40052597)
chr1 (248-301)||(13984991-13985044)
chr1 (31-133)||(23166858-23166960)
chr1 (260-301)||(44227848-44227889)
chr1 (187-250)||(1837992-1838053)
chr1 (186-253)||(3657125-3657192)
chr1 (31-158)||(34458731-34458858)
chr1 (60-118)||(1749457-1749515)
chr1 (30-155)||(14925610-14925733)
chr1 (31-133)||(24876729-24876831)
chr1 (31-137)||(25929262-25929368)
chr1 (260-306)||(41959809-41959855)
chr1 (260-301)||(3943763-3943804)
chr1 (31-155)||(31061463-31061590)
chr1 (248-301)||(44228228-44228281)
chr1 (235-287)||(40564241-40564293)
chr1 (186-253)||(52478016-52478081)
chr1 (81-136)||(1837885-1837940)
chr1 (216-301)||(40261464-40261549)
chr1 (93-158)||(3657217-3657282)
chr1 (260-301)||(9589631-9589672)
chr1 (193-242)||(18396754-18396803)
chr1 (186-253)||(31003948-31004012)
chr1 (190-242)||(7765072-7765124)
chr1 (218-253)||(14351954-14351989)
chr1 (186-241)||(40562743-40562797)
chr1 (248-293)||(1168369-1168414)
chr1 (273-302)||(16120674-16120703)
chr1 (273-309)||(40772006-40772043)
chr1 (273-301)||(6402644-6402672)
chr1 (269-301)||(10845481-10845513)
chr1 (273-301)||(11641067-11641095)
chr1 (270-302)||(13984436-13984468)
chr1 (273-301)||(30701718-30701746)
chr1 (189-233)||(31061618-31061662)
chr1 (273-301)||(36399332-36399360)
chr1 (273-301)||(36757486-36757514)
chr1 (273-301)||(40771772-40771800)
chr1 (273-301)||(52024260-52024288)
[»] chr8 (55 HSPs)
chr8 (30-301)||(40058309-40058580)
chr8 (30-301)||(11174229-11174500)
chr8 (30-302)||(43275405-43275675)
chr8 (30-301)||(7146913-7147184)
chr8 (30-301)||(11646331-11646602)
chr8 (31-302)||(37345570-37345841)
chr8 (31-301)||(3585451-3585721)
chr8 (30-301)||(40918737-40919006)
chr8 (30-309)||(36068072-36068351)
chr8 (184-301)||(2540091-2540208)
chr8 (30-158)||(30999530-30999658)
chr8 (31-158)||(2539937-2540064)
chr8 (184-294)||(30999683-30999791)
chr8 (30-158)||(27035138-27035266)
chr8 (186-303)||(27034995-27035111)
chr8 (39-155)||(20546308-20546424)
chr8 (186-303)||(20546451-20546566)
chr8 (42-157)||(27563885-27564000)
chr8 (248-308)||(45278701-45278761)
chr8 (31-158)||(35866756-35866883)
chr8 (30-158)||(28568061-28568189)
chr8 (30-158)||(28575654-28575782)
chr8 (187-301)||(28562421-28562536)
chr8 (248-301)||(8697898-8697951)
chr8 (248-301)||(41307961-41308014)
chr8 (30-158)||(26628822-26628950)
chr8 (60-158)||(13880991-13881089)
chr8 (248-302)||(40486453-40486507)
chr8 (248-301)||(10646592-10646645)
chr8 (30-156)||(45400776-45400902)
chr8 (189-301)||(28567919-28568032)
chr8 (189-301)||(28575512-28575625)
chr8 (208-253)||(28326838-28326883)
chr8 (186-299)||(35866616-35866729)
chr8 (53-137)||(10180897-10180981)
chr8 (184-243)||(13881114-13881174)
chr8 (30-118)||(28562604-28562692)
chr8 (260-301)||(41305762-41305803)
chr8 (41-137)||(30906706-30906802)
chr8 (263-307)||(40918725-40918769)
chr8 (263-309)||(7147152-7147198)
chr8 (273-307)||(32998674-32998708)
chr8 (273-302)||(132016-132045)
chr8 (97-134)||(33751253-33751290)
chr8 (184-253)||(37510314-37510383)
chr8 (263-308)||(43275392-43275437)
chr8 (260-301)||(45278013-45278053)
chr8 (273-301)||(616783-616811)
chr8 (273-301)||(617017-617045)
chr8 (273-301)||(623176-623204)
chr8 (273-301)||(623410-623438)
chr8 (269-301)||(5878317-5878349)
chr8 (273-301)||(14237514-14237542)
chr8 (273-301)||(40494618-40494646)
chr8 (273-301)||(42587482-42587510)
[»] chr3 (58 HSPs)
chr3 (30-305)||(46694116-46694391)
chr3 (30-301)||(13364843-13365114)
chr3 (30-301)||(19241674-19241945)
chr3 (30-302)||(23087937-23088209)
chr3 (30-304)||(198852-199126)
chr3 (186-301)||(29375138-29375253)
chr3 (185-302)||(36881281-36881396)
chr3 (30-158)||(36881423-36881551)
chr3 (186-301)||(3383076-3383191)
chr3 (30-155)||(29375278-29375403)
chr3 (33-158)||(3383219-3383344)
chr3 (186-301)||(43750137-43750252)
chr3 (197-294)||(32835129-32835226)
chr3 (31-157)||(13703356-13703482)
chr3 (39-158)||(43750279-43750398)
chr3 (30-133)||(48820508-48820611)
chr3 (186-301)||(13702769-13702884)
chr3 (223-301)||(27707363-27707441)
chr3 (30-158)||(18355874-18356002)
chr3 (30-158)||(32834995-32835123)
chr3 (47-158)||(31873886-31873996)
chr3 (30-158)||(48963262-48963390)
chr3 (35-157)||(48436368-48436490)
chr3 (30-137)||(6901725-6901831)
chr3 (248-301)||(12094582-12094635)
chr3 (248-302)||(19911508-19911562)
chr3 (216-301)||(37293437-37293522)
chr3 (248-301)||(44277455-44277508)
chr3 (35-137)||(54086716-54086818)
chr3 (248-301)||(38805245-38805298)
chr3 (30-106)||(26783664-26783740)
chr3 (216-284)||(48820444-48820512)
chr3 (81-157)||(52009107-52009183)
chr3 (187-249)||(19897090-19897152)
chr3 (260-306)||(44276770-44276816)
chr3 (232-301)||(48963156-48963223)
chr3 (260-301)||(19912174-19912215)
chr3 (260-301)||(38806341-38806382)
chr3 (273-307)||(19823894-19823928)
chr3 (34-136)||(27706999-27707101)
chr3 (192-242)||(37780996-37781046)
chr3 (248-301)||(4235751-4235803)
chr3 (260-301)||(12095423-12095464)
chr3 (194-250)||(1455318-1455374)
chr3 (187-278)||(54086577-54086668)
chr3 (273-303)||(13499569-13499599)
chr3 (273-303)||(42761717-42761747)
chr3 (216-294)||(53559802-53559880)
chr3 (273-310)||(20765187-20765224)
chr3 (86-155)||(37781082-37781151)
chr3 (248-292)||(4226716-4226759)
chr3 (273-301)||(6910568-6910596)
chr3 (273-301)||(20765430-20765458)
chr3 (273-301)||(27010474-27010502)
chr3 (273-301)||(27010708-27010736)
chr3 (273-301)||(42490430-42490458)
chr3 (273-301)||(42761483-42761511)
chr3 (275-307)||(44562020-44562052)
[»] chr5 (45 HSPs)
chr5 (30-304)||(30720498-30720772)
chr5 (30-301)||(12806859-12807130)
chr5 (30-301)||(40886616-40886887)
chr5 (30-301)||(10285064-10285334)
chr5 (184-301)||(25773649-25773766)
chr5 (30-158)||(36561105-36561233)
chr5 (186-308)||(36561261-36561383)
chr5 (30-155)||(25773795-25773920)
chr5 (31-157)||(23097731-23097857)
chr5 (30-158)||(25683235-25683363)
chr5 (186-301)||(37900786-37900901)
chr5 (31-156)||(37900630-37900755)
chr5 (34-157)||(16983401-16983524)
chr5 (186-290)||(7277584-7277688)
chr5 (186-301)||(16983258-16983375)
chr5 (186-263)||(25683390-25683467)
chr5 (30-158)||(39071025-39071153)
chr5 (31-157)||(11319700-11319826)
chr5 (32-133)||(734347-734448)
chr5 (187-312)||(734501-734625)
chr5 (35-158)||(16054254-16054377)
chr5 (43-137)||(30402981-30403075)
chr5 (252-301)||(15305216-15305265)
chr5 (186-251)||(23098396-23098461)
chr5 (87-158)||(7277486-7277557)
chr5 (184-253)||(30403121-30403191)
chr5 (187-301)||(39070883-39070997)
chr5 (30-157)||(1056631-1056756)
chr5 (187-307)||(11319553-11319673)
chr5 (31-134)||(26168075-26168178)
chr5 (273-310)||(8086264-8086301)
chr5 (260-301)||(15304822-15304863)
chr5 (193-301)||(11796451-11796559)
chr5 (273-304)||(33387453-33387484)
chr5 (55-133)||(11795314-11795392)
chr5 (263-301)||(25683229-25683267)
chr5 (273-302)||(978311-978340)
chr5 (97-138)||(12305687-12305728)
chr5 (273-310)||(40156189-40156226)
chr5 (273-301)||(978077-978105)
chr5 (273-301)||(9502627-9502655)
chr5 (273-301)||(14634157-14634185)
chr5 (275-303)||(24992374-24992402)
chr5 (97-137)||(34201454-34201494)
chr5 (263-307)||(40886604-40886648)
[»] chr7 (44 HSPs)
chr7 (30-301)||(10981508-10981779)
chr7 (30-301)||(27813811-27814082)
chr7 (30-299)||(36453130-36453399)
chr7 (30-303)||(25614359-25614630)
chr7 (184-301)||(40348960-40349077)
chr7 (184-303)||(47110449-47110566)
chr7 (30-158)||(47110593-47110721)
chr7 (30-158)||(40349105-40349232)
chr7 (59-157)||(3091657-3091755)
chr7 (53-153)||(27941013-27941113)
chr7 (248-301)||(25060133-25060186)
chr7 (30-158)||(16662236-16662364)
chr7 (30-158)||(17636596-17636724)
chr7 (248-301)||(2911548-2911601)
chr7 (186-253)||(3091565-3091632)
chr7 (185-253)||(7743558-7743625)
chr7 (97-139)||(6737252-6737294)
chr7 (186-243)||(16360442-16360497)
chr7 (186-251)||(16662146-16662209)
chr7 (186-251)||(17636506-17636569)
chr7 (216-278)||(37983179-37983241)
chr7 (97-137)||(41480639-41480679)
chr7 (86-157)||(8380082-8380153)
chr7 (260-295)||(25059456-25059491)
chr7 (186-241)||(27942201-27942256)
chr7 (273-308)||(41898222-41898257)
chr7 (273-304)||(47156024-47156055)
chr7 (59-157)||(24456800-24456898)
chr7 (273-307)||(28061509-28061543)
chr7 (273-307)||(46103364-46103398)
chr7 (260-301)||(2910859-2910900)
chr7 (273-302)||(36623307-36623336)
chr7 (277-310)||(48602427-48602460)
chr7 (184-295)||(8379948-8380060)
chr7 (273-301)||(16778505-16778533)
chr7 (273-301)||(20885103-20885131)
chr7 (273-301)||(25566548-25566576)
chr7 (273-301)||(28061749-28061777)
chr7 (273-301)||(36623542-36623570)
chr7 (273-301)||(38852081-38852109)
chr7 (273-301)||(41897988-41898016)
chr7 (273-301)||(42877386-42877414)
chr7 (273-301)||(46103597-46103625)
chr7 (273-301)||(47156261-47156289)
[»] chr4 (64 HSPs)
chr4 (30-301)||(24706253-24706524)
chr4 (30-301)||(44568837-44569108)
chr4 (184-301)||(21310425-21310542)
chr4 (184-301)||(25704651-25704768)
chr4 (185-301)||(14261044-14261160)
chr4 (184-301)||(12071561-12071678)
chr4 (184-301)||(22321427-22321544)
chr4 (30-157)||(21310565-21310692)
chr4 (30-157)||(40122493-40122620)
chr4 (186-301)||(40122647-40122762)
chr4 (184-301)||(34324742-34324860)
chr4 (30-158)||(12071703-12071831)
chr4 (30-158)||(14261187-14261315)
chr4 (30-158)||(22321274-22321402)
chr4 (30-157)||(25704795-25704922)
chr4 (186-306)||(21661697-21661817)
chr4 (186-306)||(21670461-21670581)
chr4 (27-158)||(20249017-20249148)
chr4 (30-158)||(21661541-21661669)
chr4 (30-158)||(21670305-21670433)
chr4 (34-157)||(50768006-50768129)
chr4 (185-294)||(50767871-50767980)
chr4 (186-304)||(20249175-20249292)
chr4 (30-157)||(21064905-21065032)
chr4 (40-158)||(31892375-31892493)
chr4 (186-301)||(1988036-1988150)
chr4 (31-158)||(19692865-19692992)
chr4 (31-158)||(19703450-19703577)
chr4 (29-158)||(18507271-18507400)
chr4 (191-299)||(31892240-31892344)
chr4 (94-158)||(34324653-34324717)
chr4 (31-158)||(6128956-6129083)
chr4 (187-304)||(26676729-26676846)
chr4 (30-118)||(50839037-50839125)
chr4 (191-253)||(20714514-20714577)
chr4 (34-137)||(32543643-32543746)
chr4 (184-301)||(6129108-6129225)
chr4 (185-241)||(34284178-34284234)
chr4 (273-308)||(19433351-19433386)
chr4 (248-286)||(19361662-19361700)
chr4 (187-301)||(19692723-19692837)
chr4 (187-301)||(19703308-19703422)
chr4 (184-250)||(32543532-32543597)
chr4 (216-253)||(48652268-48652305)
chr4 (273-305)||(55209808-55209840)
chr4 (273-304)||(2760961-2760992)
chr4 (273-303)||(2760728-2760758)
chr4 (191-233)||(18507430-18507472)
chr4 (260-294)||(19362189-19362223)
chr4 (263-309)||(20249006-20249052)
chr4 (273-303)||(55209572-55209602)
chr4 (273-301)||(4467520-4467548)
chr4 (263-303)||(12071799-12071839)
chr4 (273-301)||(26169986-26170014)
chr4 (273-301)||(26170221-26170249)
chr4 (273-301)||(29830343-29830371)
chr4 (273-301)||(35381128-35381156)
chr4 (273-301)||(38416650-38416678)
chr4 (273-301)||(38416884-38416912)
chr4 (31-59)||(39295418-39295446)
chr4 (273-301)||(44232077-44232105)
chr4 (273-301)||(45292066-45292094)
chr4 (273-301)||(47386520-47386548)
chr4 (53-137)||(48652388-48652472)
[»] chr2 (44 HSPs)
chr2 (30-301)||(39938170-39938441)
chr2 (30-300)||(23366790-23367060)
chr2 (185-301)||(3518908-3519024)
chr2 (186-301)||(1102503-1102618)
chr2 (30-273)||(1646317-1646558)
chr2 (184-301)||(37673897-37674014)
chr2 (30-157)||(22388144-22388271)
chr2 (30-158)||(3519050-3519178)
chr2 (186-301)||(12969901-12970016)
chr2 (30-157)||(1102645-1102772)
chr2 (31-157)||(37673750-37673876)
chr2 (30-158)||(12969746-12969874)
chr2 (30-137)||(40756917-40757024)
chr2 (30-157)||(39561901-39562023)
chr2 (248-301)||(34224378-34224431)
chr2 (54-158)||(34242117-34242221)
chr2 (186-253)||(35179097-35179164)
chr2 (184-224)||(22388295-22388335)
chr2 (30-149)||(28110101-28110220)
chr2 (30-133)||(36447426-36447529)
chr2 (30-157)||(37284525-37284650)
chr2 (192-242)||(14779838-14779888)
chr2 (187-253)||(19976380-19976445)
chr2 (59-117)||(32838964-32839022)
chr2 (263-304)||(12969737-12969778)
chr2 (216-291)||(1002922-1002997)
chr2 (273-308)||(11841586-11841621)
chr2 (86-157)||(28401397-28401468)
chr2 (273-307)||(5405230-5405264)
chr2 (216-250)||(32840367-32840401)
chr2 (263-301)||(40756911-40756949)
chr2 (192-253)||(18078104-18078165)
chr2 (61-158)||(19976471-19976568)
chr2 (273-302)||(44365391-44365420)
chr2 (273-301)||(2183191-2183219)
chr2 (273-301)||(7608283-7608311)
chr2 (273-309)||(8042014-8042050)
chr2 (273-301)||(8042256-8042284)
chr2 (273-305)||(13125141-13125173)
chr2 (273-301)||(19141066-19141094)
chr2 (273-301)||(19141300-19141328)
chr2 (273-301)||(39358146-39358174)
chr2 (273-305)||(39358401-39358433)
chr2 (186-301)||(39562049-39562162)
[»] chr6 (45 HSPs)
chr6 (30-302)||(8626481-8626753)
chr6 (30-301)||(29260192-29260463)
chr6 (30-294)||(30734489-30734753)
chr6 (184-301)||(1605579-1605696)
chr6 (184-301)||(13757208-13757325)
chr6 (31-158)||(13757350-13757477)
chr6 (184-301)||(7761301-7761416)
chr6 (30-158)||(1605721-1605849)
chr6 (30-158)||(7761443-7761571)
chr6 (31-157)||(8235769-8235895)
chr6 (30-158)||(4129570-4129697)
chr6 (30-158)||(15064701-15064829)
chr6 (186-301)||(15064856-15064971)
chr6 (30-158)||(31559744-31559872)
chr6 (30-157)||(17942587-17942714)
chr6 (184-286)||(31559896-31559998)
chr6 (186-295)||(30734772-30734879)
chr6 (184-301)||(8235624-8235741)
chr6 (186-303)||(4129433-4129542)
chr6 (186-301)||(17942443-17942560)
chr6 (248-301)||(19996715-19996768)
chr6 (33-158)||(20398247-20398372)
chr6 (185-250)||(21277595-21277659)
chr6 (260-301)||(19996322-19996363)
chr6 (187-253)||(3798151-3798217)
chr6 (273-309)||(4147923-4147959)
chr6 (33-132)||(1814762-1814861)
chr6 (273-304)||(25476042-25476073)
chr6 (187-301)||(14286989-14287102)
chr6 (263-301)||(15064695-15064733)
chr6 (263-301)||(17942682-17942720)
chr6 (216-301)||(1814595-1814680)
chr6 (273-302)||(22055006-22055035)
chr6 (273-306)||(32671811-32671844)
chr6 (210-243)||(33845469-33845502)
chr6 (218-250)||(11370679-11370711)
chr6 (273-301)||(18668688-18668716)
chr6 (273-301)||(18668922-18668950)
chr6 (273-301)||(19087958-19087986)
chr6 (273-301)||(19088192-19088220)
chr6 (273-301)||(20437017-20437045)
chr6 (273-301)||(24623941-24623969)
chr6 (34-134)||(26860931-26861031)
chr6 (273-301)||(32414913-32414941)
chr6 (273-301)||(32420754-32420782)
[»] scaffold1431 (2 HSPs)
scaffold1431 (184-301)||(59-176)
scaffold1431 (126-158)||(1-33)
[»] scaffold0054 (3 HSPs)
scaffold0054 (186-301)||(45454-45569)
scaffold0054 (30-158)||(45596-45724)
scaffold0054 (263-304)||(45692-45733)
[»] scaffold1770 (2 HSPs)
scaffold1770 (30-158)||(305-432)
scaffold1770 (186-303)||(168-277)
[»] scaffold0062 (2 HSPs)
scaffold0062 (44-158)||(287-401)
scaffold0062 (184-286)||(425-525)
[»] scaffold0025 (1 HSPs)
scaffold0025 (58-137)||(65199-65278)
[»] scaffold0257 (2 HSPs)
scaffold0257 (248-301)||(23467-23520)
scaffold0257 (260-304)||(23872-23916)
[»] scaffold0343 (1 HSPs)
scaffold0343 (29-157)||(6906-7033)
[»] scaffold0056 (2 HSPs)
scaffold0056 (34-158)||(71226-71350)
scaffold0056 (186-251)||(70874-70939)
[»] scaffold0168 (1 HSPs)
scaffold0168 (34-158)||(7811-7935)
[»] scaffold0076 (1 HSPs)
scaffold0076 (87-157)||(15386-15456)
[»] scaffold0022 (1 HSPs)
scaffold0022 (273-303)||(100645-100675)
[»] scaffold0018 (1 HSPs)
scaffold0018 (275-307)||(67764-67796)


Alignment Details
Target: chr1 (Bit Score: 176; Significance: 9e-95; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 30 - 304
Target Start/End: Original strand, 23045285 - 23045559
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||| ||||||||||||||||||||||    
T  23045285 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaata 23045384  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  23045385 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 23045484  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23045485 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 23045559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 40783663 - 40783934
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  40783663 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 40783762  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  40783763 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 40783862  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40783863 acaaaatttatttgatttcttggttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 40783934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 30 - 304
Target Start/End: Complemental strand, 284604 - 284330
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||| ||||||||||| ||| ||||||    
T  284604 ctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttatcaata 284505  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||| ||||||||||||||||||    
T  284504 atacccttgcatatttattgtagagagagagaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaata 284405  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  284404 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 284330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 30 - 309
Target Start/End: Original strand, 47037858 - 47038135
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| ||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  47037858 ctccgtttcataatacttgtctattttaaagaataattttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 47037957  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||  ||||||||||||||||||||||||    
T  47037958 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaata 47038055  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatatttat 309  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  47038056 acaaaatttatttgatttcttagttagtacaatttctccaaaatggacatgtattttgaaacggatggagtagtatttat 47038135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 321743 - 321625
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  321743 gattaaggatattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatgaacatgtat 321644  T
Q  284 tttgaaacggagggagtaa 302  Q
    |||||||||||||||||||    
T  321643 tttgaaacggagggagtaa 321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 186 - 302
Target Start/End: Original strand, 24772067 - 24772183
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24772067 ttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttcttcaaaatggacatgtattt 24772166  T
Q  286 tgaaacggagggagtaa 302  Q
    |||||||||||||||||    
T  24772167 tgaaacggagggagtaa 24772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 321897 - 321770
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  321897 ctccgtttcataatacttgtccattttagagaatatttttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 321798  T
Q  130 atacccttgcacatttattgtagagaga 157  Q
    ||||||||||| ||||||||||||||||    
T  321797 atacccttgcatatttattgtagagaga 321770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 27211126 - 27211240
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27211126 ttaagggtattatagaaaacacacatataatttcctcaaaaataacaaaatttatttggtttcttggttattgcaatttctccaaaatggacatgtattt 27211225  T
Q  286 tgaaacggagggagt 300  Q
    |||||||||||||||    
T  27211226 tgaaacggagggagt 27211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 23526510 - 23526385
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  23526510 ctccgtttcataatacttgtccattttgaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 23526411  T
Q  130 atacccttgcacatttattgtagaga 155  Q
    |||||||| || ||||||||||||||    
T  23526410 atacccttacatatttattgtagaga 23526385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 27210961 - 27211089
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  27210961 ctccgtttcataatatttgtccatttttaagaataattttgtttcacaatacttgtcacatttaagtttcaatgcaacattaattattgtcttgtcaata 27211060  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||| ||||||||    
T  27211061 atacccttgcatatttattgcagagagag 27211089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 186 - 294
Target Start/End: Complemental strand, 46771752 - 46771644
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  46771752 ttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttaatttcttggttactgcaatttctccaaaatggacatgtattt 46771653  T
Q  286 tgaaacgga 294  Q
    |||||||||    
T  46771652 tgaaacgga 46771644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 23526355 - 23526240
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  23526355 ttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttgattactgcaatttctccaaaatgaacatgtattt 23526256  T
Q  286 tgaaacggagggagta 301  Q
    ||||| ||| ||||||    
T  23526255 tgaaatggaaggagta 23526240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 24771912 - 24772040
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | || | |||| ||||||||||||||||||||||||||| || ||||||    
T  24771912 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacatgtctctttcaagtttcaatgcaatattaattattgttttttcaata 24772011  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||| ||||  | |||||||||||| ||||    
T  24772012 atagccttaaatatttattgtagaaagag 24772040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 33083015 - 33082887
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| | || | |||| || ||||||||||||||||||||||||||| ||||||    
T  33083015 ctccgtttcataatacttgtccattttaaagaataattttgtttcacaatacatgtctctttcaaatttcaatgcaatattaattattgtcttctcaata 33082916  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||  | |||||||||||| ||||    
T  33082915 atacccttaaatatttattgtagaaagag 33082887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 281
Target Start/End: Complemental strand, 33082860 - 33082765
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgt 281  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  33082860 ttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaatagacatgt 33082765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 46771909 - 46771781
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||||||| |||  |||||| ||||||||||| || |||||||||| |||||||||||    
T  46771909 ctccgtttcataatacttgttcattttgaagaataattttgtttcacaatacttatcactttcaagtttcaatgtaacattaattattttcttgtcaata 46771810  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    |||| ||| || |||||||||||||||||    
T  46771809 atactcttacatatttattgtagagagag 46771781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 40562293 - 40562416
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||||| ||||||||||||||||||  ||||| ||||||||| ||||| |||| |||||| |||||||||||||| ||||||||||||||||||||| |    
T  40562293 tccgttttataatacttgtccattttgaagaatgattttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaatga 40562392  T
Q  131 tacccttgcacatttattgtagaga 155  Q
    || ||||||| |||||||| |||||    
T  40562393 ta-ccttgcatatttattgcagaga 40562416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 40261320 - 40261419
Alignment:
Q  59 agaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagagag 158  Q
    ||||||||||||||||||| | |||| |||||| |||||||||||||| |||||||||||  ||||||||||||||||| || |||||||||||||||||    
T  40261320 agaataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattggtttgtcaataatacccttacatatttattgtagagagag 40261419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 34 - 158
Target Start/End: Original strand, 31003797 - 31003921
Alignment:
Q  34 gtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatac 133  Q
    |||||| ||||||| ||  |||| |||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||| |||  ||||| |||||||    
T  31003797 gtttcacaatacttatcgcttttggagaataattttgtttcacattacttgccactttcaagtttcaatgcaacattaattgttggtttgtccataatac 31003896  T
Q  134 ccttgcacatttattgtagagagag 158  Q
    |||| |  |||||||||||||||||    
T  31003897 ccttacctatttattgtagagagag 31003921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 34 - 158
Target Start/End: Original strand, 51064764 - 51064888
Alignment:
Q  34 gtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatac 133  Q
    |||||| ||||||||||||||||||||||||||||||||||||  |  ||| |||||| ||||||||||||||  |||||||||   || ||||||||||    
T  51064764 gtttcacaatacttgtccattttagagaataattttgtttcactttatttgtcactttcaagtttcaatgcaacgttaattattagtttatcaataatac 51064863  T
Q  134 ccttgcacatttattgtagagagag 158  Q
    |||| |  |||||||||||||||||    
T  51064864 ccttacctatttattgtagagagag 51064888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 286
Target Start/End: Original strand, 52037284 - 52037382
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||| |||||||||||||||||||  || ||| ||||||||||| |||||||||||||||| |||| || ||||||||||| |||||||||||||||||    
T  52037284 ttaagagtattatagaaaacacaca--taattttatcaaaaataataaaatttatttggttttttggataatgcaatttctctaaaatggacatgtattt 52037381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 51064925 - 51065037
Alignment:
Q  193 tattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacg 292  Q
    |||||||||||| ||||| | | ||||||||||||| |||| ||||||||| || ||||||  ||| |||||||  |||||||||| ||||| |||||||    
T  51064925 tattatagaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttctttaaaatggacaagtattgtgaaacg 51065024  T
Q  293 gagggagtaatat 305  Q
    |||||||||||||    
T  51065025 gagggagtaatat 51065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 248 - 303
Target Start/End: Complemental strand, 41959131 - 41959076
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 303  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41959131 cttggttattgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 41959076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 1749415 - 1749305
Alignment:
Q  193 tattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacg 292  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||| ||  |||| |   ||||||| ||||||||| |||||    
T  1749415 tattatagaaaacacacatataatttcatcaaaaataacaaaatttatttgatttcttgattactgtgattttttttaaatggaaatgtattttaaaacg 1749316  T
Q  293 gagggagtaat 303  Q
    ||  |||||||    
T  1749315 gatcgagtaat 1749305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 3943113 - 3943060
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3943113 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 3943060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 9588723 - 9588670
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9588723 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 9588670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 18396965 - 18396837
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||| ||||| |||||||||   |||| |||||||||||||||| |||    ||| |||||| |||||||||||||| ||||||||||| ||| ||||||    
T  18396965 ctccatttcacaatacttgttgcttttggagaataattttgttttacataatttgtcactttcaagtttcaatgcaacattaattattgacttttcaata 18396866  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    || ||||| |  |||||||||||||||||    
T  18396865 attcccttacttatttattgtagagagag 18396837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 27143021 - 27143146
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    |||| ||||||||| |||||  |||| |||||||||||||||||||| | |||| ||||   |||||||||| ||| |||||||||||  ||||||||||    
T  27143021 tccgcttcataataattgtcgcttttggagaataattttgtttcacattacttgtcactc--aagtttcaatacaacattaattattggtttgtcaataa 27143118  T
Q  131 tacccttgcacatttattgtagagagag 158  Q
    ||||||| |  ||||| |||||||||||    
T  27143119 tacccttacctatttactgtagagagag 27143146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 40052501 - 40052597
Alignment:
Q  61 aataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagaga 157  Q
    ||||||||||||||||| | |||| |||||| |||||||||||||| |||||||||||  |||||||||||| | ||||  ||||||| ||||||||    
T  40052501 aataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattggtttgtcaataatatcgttgcttatttattatagagaga 40052597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 13984991 - 13985044
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  13984991 cttggttactgcaatttctccaaaatggacatgtattttgaaacggatggagta 13985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 23166858 - 23166960
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||||||| |||||| |||  ||||||||||||||||||||||||| |  ||   ||||| |||||||||| ||| |||||||||||  ||||||||||    
T  23166858 tccgtttcacaatactcgtcgcttttagagaataattttgtttcacattatttattactttcaagtttcaatacaacattaattattgatttgtcaataa 23166957  T
Q  131 tac 133  Q
    |||    
T  23166958 tac 23166960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 44227889 - 44227848
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44227889 aatttctccaaaatggacatgtattttgaaacggagggagta 44227848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 1837992 - 1838053
Alignment:
Q  187 taagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 250  Q
    |||||||||||||||||| |||||  || |||||||||||||||||||||||||||| ||||||    
T  1837992 taagggtattatagaaaaaacaca--taatttcatcaaaaataacaaaatttatttgatttctt 1838053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 3657192 - 3657125
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    |||||| |||||||||||| ||| ||| | |||||| ||||||||||||||||||||| |||||||||    
T  3657192 ttaaggttattatagaaaaaacatacaaaatttcattaaaaataacaaaatttatttgatttcttggt 3657125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 34458731 - 34458858
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||||||| ||||  ||||  |||| |||||||||||||||||||  | |||| |||||| ||||||| |||||| |||||||||||  ||  | ||||    
T  34458731 tccgtttcacaatatatgtcgcttttggagaataattttgtttcactttacttgtcactttcaagtttcgatgcaacattaattattggtttaccgataa 34458830  T
Q  131 tacccttgcacatttattgtagagagag 158  Q
    ||||||| || ||| ||| |||||||||    
T  34458831 tacccttacatattcattatagagagag 34458858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 1749515 - 1749457
Alignment:
Q  60 gaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattg 118  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||| |||| ||||||    
T  1749515 gaataattttgtttcacaatacttgttacttttaagtttcaatgcaacattagttattg 1749457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 14925733 - 14925610
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||| ||||||||||  |||||||| |||||||||||||||  | |||| |  ||| ||||||||||||||  |||  |||||  |||||||||    
T  14925733 ctccgtttcacaatacttgtcgtttttagagcataattttgtttcactttacttgtcgttttcaagtttcaatgcaacctta--tattggtttgtcaata 14925636  T
Q  130 atacccttgcacatttattgtagaga 155  Q
    |||| ||| |  ||||||||||||||    
T  14925635 atactcttacctatttattgtagaga 14925610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 24876831 - 24876729
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||| ||| ||||||||||  |||| ||||||||||||||||||   | |||| |||||| |||| ||||||| | |||||||||||  ||||||||||    
T  24876831 tccgtctcacaatacttgtcgtttttggagaataattttgtttcattttacttgtcactttcaagtgtcaatgcgacattaattattggtttgtcaataa 24876732  T
Q  131 tac 133  Q
    |||    
T  24876731 tac 24876729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 25929368 - 25929262
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||||||| ||||||||||  ||||| |||||||||||||||||     |||||| |||| ||||||||| |||| ||||| |||||  || |||||||    
T  25929368 tccgtttcacaatacttgtcgcttttaaagaataattttgtttcatttcacttgcccctttcaagtttcaacgcaacattaaatattgatttatcaataa 25929269  T
Q  131 taccctt 137  Q
    |||||||    
T  25929268 taccctt 25929262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 41959809 - 41959855
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagtaatatt 306  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  41959809 aatttctctaaaatggacatgtattttgaaacggagggagtattatt 41959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 3943763 - 3943804
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  3943763 aatttctctaaaatggacatgtattttgaaacggagggagta 3943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 31061463 - 31061590
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgct---tgccacttttaagtttcaatgcaatattaattattgtcttgtcaa 127  Q
    ||||||||| ||||||||||  |||| || ||||||||| ||||||| | ||   || |||| | |||||||||||||| |||||||||||  ||| |||    
T  31061463 tccgtttcacaatacttgtcacttttggaaaataattttatttcacattactacttgtcactctcaagtttcaatgcaacattaattattggtttgacaa 31061562  T
Q  128 taatacccttgcacatttattgtagaga 155  Q
    |||||||||  || ||||| ||||||||    
T  31061563 taataccctcacatatttactgtagaga 31061590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 44228228 - 44228281
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||    
T  44228228 cttggttacagcaatttctccaaaatggacatgtattttgaaatggaggtagta 44228281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 40564241 - 40564293
Alignment:
Q  235 atttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttg 287  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||| |||||||    
T  40564241 atttatttggtttcttggttactgcgatttttccaaaatggacatatattttg 40564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 52478081 - 52478016
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    |||||| |||||||||||| ||||| |   |||||||||||||||||||||||||||| |||||||||    
T  52478081 ttaaggttattatagaaaaaacacaaaa--tttcatcaaaaataacaaaatttatttgatttcttggt 52478016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 1837885 - 1837940
Alignment:
Q  81 cttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataataccct 136  Q
    |||| ||||||||||||||||||||| |||||||||||  || |||||||||||||    
T  1837885 cttgtcacttttaagtttcaatgcaacattaattattgatttatcaataataccct 1837940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 301
Target Start/End: Original strand, 40261464 - 40261549
Alignment:
Q  216 tttcatcaaaaataacaaaatttatttggtttcttggttagtg-caatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||| |||||||||||||||| |||||||||  |||  ||||||| |||||   ||||||||| ||||||||||||||||    
T  40261464 tttcatcaaaattaacaaaatttatttgatttcttggtatgtgtaaatttct-caaaagcaacatgtattgtgaaacggagggagta 40261549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 3657282 - 3657217
Alignment:
Q  93 aagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagagag 158  Q
    |||||||||||||| |||||||||||  |||||||||||||  || |  |||||||||||||||||    
T  3657282 aagtttcaatgcaacattaattattggtttgtcaataatacttttacctatttattgtagagagag 3657217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 9589631 - 9589672
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  9589631 aatttctctaaaatagacatgtattttgaaacggagggagta 9589672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 18396803 - 18396754
Alignment:
Q  193 tattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 242  Q
    ||||||||||||  |||||||| |||||| ||||||||||||||||||||    
T  18396803 tattatagaaaaaccacacataatttcataaaaaataacaaaatttattt 18396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 31003948 - 31004012
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    ||||||||||||||||||| | ||||||| |||||| ||||||   |||||||||||| |||||||||    
T  31003948 ttaagggtattatagaaaaaatacacatactttcattaaaaat---aaaatttatttgatttcttggt 31004012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 7765124 - 7765072
Alignment:
Q  190 gggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 242  Q
    ||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||    
T  7765124 gggtattacggaaaacacacatataatttcaccaaaaataacaaaatttattt 7765072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 14351954 - 14351989
Alignment:
Q  218 tcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    |||||||||||||||||||||||||| |||||||||    
T  14351954 tcatcaaaaataacaaaatttatttgttttcttggt 14351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 40562743 - 40562797
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 241  Q
    |||| |||||||||||||||||| | ||| ||| ||||||||||||||||||||||    
T  40562743 ttaatggtattatagaaaacacatatataattt-atcaaaaataacaaaatttatt 40562797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 1168414 - 1168369
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacgg 293  Q
    |||||||| |||||||||| |||||  |||||||||||||||||||    
T  1168414 cttggttactgcaatttcttcaaaaacgacatgtattttgaaacgg 1168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 16120674 - 16120703
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaa 302  Q
    ||||||||||||||||||||||||||||||    
T  16120674 tggacatgtattttgaaacggagggagtaa 16120703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 40772006 - 40772043
Alignment:
Q  273 tggacatgtattttgaaacggagggagta-atatttat 309  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  40772006 tggacatgtattttgaaacggagggagtatatatttat 40772043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 6402644 - 6402672
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  6402644 tggacatgtattttgaaacggagggagta 6402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 301
Target Start/End: Complemental strand, 10845513 - 10845481
Alignment:
Q  269 aaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||| |||||    
T  10845513 aaaatggacatgtattttgaaacggagtgagta 10845481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 11641095 - 11641067
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  11641095 tggacatgtattttgaaacggagggagta 11641067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 13984468 - 13984436
Alignment:
Q  270 aaatggacatgtattttgaaacggagggagtaa 302  Q
    ||||||| |||||||||||||||||||||||||    
T  13984468 aaatggatatgtattttgaaacggagggagtaa 13984436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 30701746 - 30701718
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  30701746 tggacatgtattttgaaacggagggagta 30701718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 31061618 - 31061662
Alignment:
Q  189 agggtattatagaaaacacacacatattttcatcaaaaataacaa 233  Q
    |||||||||| ||||| ||||||||| |||||| |||||||||||    
T  31061618 agggtattatggaaaaaacacacataatttcataaaaaataacaa 31061662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 36399332 - 36399360
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  36399332 tggacatgtattttgaaacggagggagta 36399360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 36757514 - 36757486
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  36757514 tggacatgtattttgaaacggagggagta 36757486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 40771800 - 40771772
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  40771800 tggacatgtattttgaaacggagggagta 40771772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 52024260 - 52024288
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  52024260 tggacatgtattttgaaacggagggagta 52024288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 6e-93; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 40058309 - 40058580
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  40058309 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 40058408  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  40058409 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 40058508  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40058509 acaaaatttatttggtttcttggttagtgcaatttctccgaaatggacatgtattttgaaacggagggagta 40058580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 11174229 - 11174500
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  11174229 ctccgtttcataatacttgttcattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 11174328  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  11174329 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 11174428  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11174429 acaaaatttatttggtttcttggttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 11174500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 30 - 302
Target Start/End: Original strand, 43275405 - 43275675
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| |||||||||| |||||||||||    
T  43275405 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattatcttgtcaata 43275504  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||  ||||||||||||||||||||    
T  43275505 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaata 43275602  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43275603 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 43275675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 30 - 301
Target Start/End: Complemental strand, 7147184 - 7146913
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  7147184 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 7147085  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         |||||||||||||||| |||||||||||||||||||||||||||||    
T  7147084 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattataaaaaacacacacatattttcatcaaaaata 7146985  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||    
T  7146984 acaaaatttatttggtttcttggttactgcaatttcttcaaaatggacatgtattttgaaacggaaggagta 7146913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 11646331 - 11646602
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||| ||||||||||| ||||||||||    
T  11646331 ctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaata 11646430  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||| ||||||||||||||||||    
T  11646431 atacccttgcatatttattgtagagagagaaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaata 11646530  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11646531 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacgaagggagta 11646602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 31 - 302
Target Start/End: Complemental strand, 37345841 - 37345570
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||| |||||||||||||||||||||||    
T  37345841 tccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcattttcaagtttcaatgcaacattaattattgtcttgtcaataa 37345742  T
Q  131 tacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaataa 230  Q
    |||||||||| |||||||||||||||||                         |||||||||||||||||||||||||||||||||||||| ||||||||    
T  37345741 tacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcattaaaaataa 37345642  T
Q  231 caaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 302  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  37345641 caaaatttatttggtttcttggttggtgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 37345570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 31 - 301
Target Start/End: Complemental strand, 3585721 - 3585451
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||| |||| |||||| |||||||||||||| ||||||||||| |||||||||||    
T  3585721 tccgtttcataatacttgtctattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataa 3585622  T
Q  131 tacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaataa 230  Q
    |||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||| |||||||||||||||||||    
T  3585621 tacccttgcatatttattgtagagagaggaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataa 3585522  T
Q  231 caaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585521 caaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 3585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 40918737 - 40919006
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  40918737 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 40918836  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||  |||||||| ||||||| |||||||    
T  40918837 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatgttttcataaaaaata 40918934  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40918935 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 40919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 30 - 309
Target Start/End: Complemental strand, 36068351 - 36068072
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||| ||||||||||| ||||||||||    
T  36068351 ctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaata 36068252  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||| |||||||||| |||||||    
T  36068251 atacccttgcatatttattgtagagagagaaaaaagtaaaatgaaataattaatgattaagggtattatagaaaacacacatatattttcattaaaaata 36068152  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatatttat 309  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  36068151 acaaaatttatttggttttttggttagtacaattcctccaaaatggacatgtattttgaaacggagggagtaatttttat 36068072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 2540091 - 2540208
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2540091 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 2540190  T
Q  284 tttgaaacggagggagta 301  Q
    ||||||||||||| ||||    
T  2540191 tttgaaacggaggaagta 2540208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 30999530 - 30999658
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| |||||||||||||| ||||||||||||||||||||||    
T  30999530 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgttactttcaagtttcaatgcaacattaattattgtcttgtcaata 30999629  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  30999630 atacccttgcatatttattgtagagagag 30999658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 2539937 - 2540064
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| |||||||||||||| |||||||||||||||||||||||    
T  2539937 tccgtttcataatacttgtccattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataa 2540036  T
Q  131 tacccttgcacatttattgtagagagag 158  Q
    |||||||||| |||||||||||||||||    
T  2540037 tacccttgcatatttattgtagagagag 2540064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 184 - 294
Target Start/End: Original strand, 30999683 - 30999791
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30999683 gattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaattgacatgtat 30999780  T
Q  284 tttgaaacgga 294  Q
    |||||||||||    
T  30999781 tttgaaacgga 30999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 27035266 - 27035138
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  27035266 ctccgtttcataatacttgttcattttggagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 27035167  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    |||||||| || ||||| |||||||||||    
T  27035166 atacccttacatatttactgtagagagag 27035138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 186 - 303
Target Start/End: Complemental strand, 27035111 - 27034995
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27035111 ttaagggtattatagaaa-cacagacataatttcatcaaaaataaaaaaaattatttggtttcttggttactgcaatttctccaaaatggacatgtattt 27035013  T
Q  286 tgaaacggagggagtaat 303  Q
    ||||||||||||||||||    
T  27035012 tgaaacggagggagtaat 27034995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 20546308 - 20546424
Alignment:
Q  39 ataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttg 138  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||| |||||| | |||||||||||| ||||||||||||||||||||||||||||||     
T  20546308 ataatacttgtccattttgaagaataattttgtttcacaatacttgtcactttcaggtttcaatgcaacattaattattgtcttgtcaataataccctta 20546407  T
Q  139 cacatttattgtagaga 155  Q
    || ||||||||||||||    
T  20546408 catatttattgtagaga 20546424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 186 - 303
Target Start/End: Original strand, 20546451 - 20546566
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||||||||| ||| ||||||||||  || |||||||||||||||||||||||||||  ||||||| ||  |||||||||| |||||||||||| |||||    
T  20546451 ttaagggtatcatataaaacacaca--taatttcatcaaaaataacaaaatttatttaatttcttgattgttgcaatttcttcaaaatggacatatattt 20546548  T
Q  286 tgaaacggagggagtaat 303  Q
    ||||| ||||||||||||    
T  20546549 tgaaatggagggagtaat 20546566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 27563885 - 27564000
Alignment:
Q  42 atacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcac 141  Q
    |||||||||  |||| ||||| |||||||||||| | | |||| |||||| |||||||||||||| ||||||||||| |||||||||||||||||| |      
T  27563885 atacttgtcgcttttggagaacaattttgtttcatattacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatacccttacct 27563984  T
Q  142 atttattgtagagaga 157  Q
    ||||||||||||||||    
T  27563985 atttattgtagagaga 27564000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 45278701 - 45278761
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatattta 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45278701 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaatattta 45278761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 35866883 - 35866756
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||   | |||| |||||| |||||||||| ||| |||||||||||  || |||||||    
T  35866883 tccgtttcacaatacttgtctattttggagaataattttgtttcattttacttgtcactttcaagtttcaattcaacattaattattggtttatcaataa 35866784  T
Q  131 tacccttgcacatttattgtagagagag 158  Q
    ||| ||| || || ||||||||||||||    
T  35866783 tactcttacatatctattgtagagagag 35866756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 28568189 - 28568061
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||| ||||| |||||||||||||||| |||||| |||||||||||   | |||| |||||| |||||||||||||| |||||||||||  || ||||||    
T  28568189 ctccatttcacaatacttgtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgcaacattaattattggtttatcaata 28568090  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
     ||||||| |  ||||||||| |||||||    
T  28568089 ttacccttacctatttattgttgagagag 28568061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 28575782 - 28575654
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||| ||||| |||||||||||||||| |||||| |||||||||||   | |||| |||||| |||||||||||||| |||||||||||  || ||||||    
T  28575782 ctccatttcacaatacttgtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgcaacattaattattggtttatcaata 28575683  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
     ||||||| |  ||||||||| |||||||    
T  28575682 ttacccttacctatttattgttgagagag 28575654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 28562536 - 28562421
Alignment:
Q  187 taagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||||||||||||||||| | |||| | | ||||||||||||| |||| ||||||||| || ||||||  ||| ||||||| ||||||||||| ||||||    
T  28562536 taagggtattatagaaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaaatggacaagtattt 28562437  T
Q  286 tgaaacggagggagta 301  Q
    ||||||||||| ||||    
T  28562436 tgaaacggaggaagta 28562421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 8697898 - 8697951
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8697898 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 8697951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 41307961 - 41308014
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41307961 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 41308014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 26628822 - 26628950
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||| ||||| |||   |||| |||||||||||||||||||  |  ||| || ||| |||||||||||||| |||||||||||  || ||||||    
T  26628822 ctccgtttcacaatacatgttgcttttggagaataattttgtttcactttatttgtcattttcaagtttcaatgcaacattaattattgatttatcaata 26628921  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    |||||||| |  |||||||||||||||||    
T  26628922 atacccttacctatttattgtagagagag 26628950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 13880991 - 13881089
Alignment:
Q  60 gaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagagag 158  Q
    |||||||||||||||| | | |||| |||||| ||||||||||||||||||||||||||  |||| |||||||  ||| |  |||||||||||||||||    
T  13880991 gaataattttgtttcaaattacttgtcactttcaagtttcaatgcaatattaattattgatttgttaataataatcttactaatttattgtagagagag 13881089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 40486453 - 40486507
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 302  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  40486453 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 40486507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 10646645 - 10646592
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  10646645 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggaagta 10646592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 45400776 - 45400902
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||  |||  |||| |||||||||||||||||||  |  ||| ||||||||| ||||||||||| ||||||||||   || ||||||    
T  45400776 ctccgtttcataatacaagtcgtttttggagaataattttgtttcactttatttgtcacttttaaatttcaatgcaacattaattattaatttatcaata 45400875  T
Q  130 atacccttgcacatttattgtagagag 156  Q
    |||  ||| |  |||||||||||||||    
T  45400876 atattcttacttatttattgtagagag 45400902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 28568032 - 28567919
Alignment:
Q  189 agggtattatagaaaac-acacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttg 287  Q
    ||||||||||||||||  ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||| ||||||| ||||||||||| ||||||||    
T  28568032 agggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttcttcaaaatggacaagtattttg 28567933  T
Q  288 aaacggagggagta 301  Q
    ||||||||| ||||    
T  28567932 aaacggaggaagta 28567919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 28575625 - 28575512
Alignment:
Q  189 agggtattatagaaaac-acacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttg 287  Q
    ||||||||||||||||  ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||| ||||||| ||||||||||| ||||||||    
T  28575625 agggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttcttcaaaatggacaagtattttg 28575526  T
Q  288 aaacggagggagta 301  Q
    ||||||||| ||||    
T  28575525 aaacggaggaagta 28575512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 28326838 - 28326883
Alignment:
Q  208 acacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||    
T  28326838 acacataatttcatcaaaaataacaaaatttatttgatttcttggt 28326883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 299
Target Start/End: Complemental strand, 35866729 - 35866616
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||||||||||||| ||||| | | |||||| ||||||||||| |||||| |  |||||||||   |  |||||||  |||||||||| |||||     
T  35866729 ttaagggtattatagaaaaaacacaaagaatttcatgaaaaataacaacatttatctaatttcttggtatatataatttctttaaaatggacaagtattg 35866630  T
Q  286 tgaaacggagggag 299  Q
    ||||||||| ||||    
T  35866629 tgaaacggaaggag 35866616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 10180897 - 10180981
Alignment:
Q  53 ttttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataataccctt 137  Q
    |||| ||||| |||||||||||||| | |||| |||||| |||||||||||||| |||| ||||    |||||||||||||||||    
T  10180897 ttttggagaacaattttgtttcacattacttgtcactttcaagtttcaatgcaacattagttatgaatttgtcaataataccctt 10180981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 13881114 - 13881174
Alignment:
Q  184 gattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttg 243  Q
    ||||||||||||||||||||| | | |||| | ||||||||||||||||||||||||||||    
T  13881114 gattaagggtattatagaaaaaaacgcacacaatttcatcaaaaataacaaaatttatttg 13881174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 28562692 - 28562604
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattg 118  Q
    |||||| ||| ||||||| ||||||||  ||||| |||||||||||   | |||| |||||| |||||||||||||| |||||||||||    
T  28562692 ctccgtctcacaatacttatccattttgaagaattattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattg 28562604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 41305803 - 41305762
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| ||||||||||||||||||||||||||| |||||    
T  41305803 aatttctctaaaatggacatgtattttgaaacggagagagta 41305762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 30906706 - 30906802
Alignment:
Q  41 aatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataataccctt 137  Q
    ||||||||||  ||||  ||||||||||| ||| ||| | ||||  |||||||| ||| |||||||||||||||||||  |||| ||||||| ||||    
T  30906706 aatacttgtcgtttttgaagaataattttattttacattacttgttacttttaaattttaatgcaatattaattattgaattgttaataatatcctt 30906802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 40918769 - 40918725
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagtaatattt 307  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||    
T  40918769 ttctctaaaatggacaagtattatgaaacggagggagtaatattt 40918725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 7147152 - 7147198
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagtaatatttat 309  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||    
T  7147152 ttctctaaaatggacaagtattatgaaacggagggagtagtatttat 7147198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Original strand, 32998674 - 32998708
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatattt 307  Q
    |||||||||||||||||||| ||||||||||||||    
T  32998674 tggacatgtattttgaaacgaagggagtaatattt 32998708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 132045 - 132016
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaa 302  Q
    ||||||||||||||||||||||||||||||    
T  132045 tggacatgtattttgaaacggagggagtaa 132016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 33751253 - 33751290
Alignment:
Q  97 ttcaatgcaatattaattattgtcttgtcaataatacc 134  Q
    ||||||||||||||||||||||| || |||||||||||    
T  33751253 ttcaatgcaatattaattattgttttatcaataatacc 33751290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 37510383 - 37510314
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    ||||||||||||||| ||||| | | | | | ||| || |||||||||||||||||||| ||||||||||    
T  37510383 gattaagggtattattgaaaaaatagaaagaattttattaaaaataacaaaatttatttagtttcttggt 37510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 43275437 - 43275392
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagtaatattta 308  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||    
T  43275437 ttctctaaaatggacaagtattatgaaacggagggagtattattta 43275392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 45278053 - 45278013
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  45278053 aatttctctaaaatggacatgtattttgaaac-gagggagta 45278013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 616811 - 616783
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  616811 tggacatgtattttgaaacggagggagta 616783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 617017 - 617045
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  617017 tggacatgtattttgaaacggagggagta 617045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 623204 - 623176
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  623204 tggacatgtattttgaaacggagggagta 623176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 623410 - 623438
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  623410 tggacatgtattttgaaacggagggagta 623438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 301
Target Start/End: Complemental strand, 5878349 - 5878317
Alignment:
Q  269 aaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||| |||||||||||||||    
T  5878349 aaaatggacatgtatttggaaacggagggagta 5878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 14237514 - 14237542
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  14237514 tggacatgtattttgaaacggagggagta 14237542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 40494618 - 40494646
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  40494618 tggacatgtattttgaaacggagggagta 40494646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 42587482 - 42587510
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  42587482 tggacatgtattttgaaacggagggagta 42587510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 6e-93; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 30 - 305
Target Start/End: Original strand, 46694116 - 46694391
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  46694116 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 46694215  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  46694216 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 46694315  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatat 305  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46694316 acaaaatttatttggtttcttgattagtgcaatttctccaaaaaggacatgtattttgaaacggagggagtaatat 46694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 30 - 301
Target Start/End: Complemental strand, 13365114 - 13364843
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  13365114 ctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 13365015  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  13365014 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 13364915  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13364914 acaaaatttatttggtttcttggttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 13364843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 19241674 - 19241945
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||    
T  19241674 ctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcacttttaagtttcaatgcaacattaattattgacttgtcaata 19241773  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    |||||||||||  ||||||||||||||||                         ||||||||||||||||||||||||||| ||||||||||||||||||    
T  19241774 atacccttgcatgtttattgtagagagagaaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaata 19241873  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19241874 acaaaatttatttggtttcttggttagtgcaatttcaccaaaatggacatgtattttgaaacggagggagta 19241945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 30 - 302
Target Start/End: Original strand, 23087937 - 23088209
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  23087937 ctccgtttcataatacttgtcgattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 23088036  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  23088037 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 23088136  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 302  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||| ||||||||||    
T  23088137 acaaaatttatttggtttcttggttagtgcaatttcttcaaaatagacatatattttgaaacagagggagtaa 23088209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 30 - 304
Target Start/End: Complemental strand, 199126 - 198852
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||| |||||||||| |||||||||||||| |||||||||||||||||||  ||| || ||| |||||||||||||| |||||||||||| |||||||||    
T  199126 ctccatttcataatagttgtccattttagaaaataattttgtttcacaatatttgtcattttcaagtttcaatgcaacattaattattgttttgtcaata 199027  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||| ||||||||||||||||||    
T  199026 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaata 198927  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 304  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  198926 acaaaatttatttggtttcttggtcagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 198852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 29375253 - 29375138
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29375253 ttaagggtattatagaaaacacacacatattttcatcaaaaataagaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtattt 29375154  T
Q  286 tgaaacggagggagta 301  Q
    ||||||||||||||||    
T  29375153 tgaaacggagggagta 29375138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 185 - 302
Target Start/End: Complemental strand, 36881396 - 36881281
Alignment:
Q  185 attaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 284  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36881396 attaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 36881299  T
Q  285 ttgaaacggagggagtaa 302  Q
    ||||||||||||||||||    
T  36881298 ttgaaacggagggagtaa 36881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 36881551 - 36881423
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||| ||||||||||||||||||||||    
T  36881551 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaata 36881452  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  36881451 atacccttgcatatttattgtagagagag 36881423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 3383191 - 3383076
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  3383191 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatatattt 3383092  T
Q  286 tgaaacggagggagta 301  Q
    ||||||||| ||||||    
T  3383091 tgaaacggaaggagta 3383076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 29375403 - 29375278
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  29375403 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 29375304  T
Q  130 atacccttgcacatttattgtagaga 155  Q
    || |||||||| ||||||||||||||    
T  29375303 atgcccttgcatatttattgtagaga 29375278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 3383344 - 3383219
Alignment:
Q  33 cgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataata 132  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  3383344 cgttttataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataata 3383245  T
Q  133 cccttgcacatttattgtagagagag 158  Q
    | |||||| |||||||||||||||||    
T  3383244 ctcttgcatatttattgtagagagag 3383219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 43750252 - 43750137
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  43750252 ttaagtgtattatagaaaacacacatataatttcatcaaaaataacaaaatttatttggtttcttggttactccaatttctccaaaatggacatgtattt 43750153  T
Q  286 tgaaacggagggagta 301  Q
    ||||||| ||||||||    
T  43750152 tgaaacgaagggagta 43750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 197 - 294
Target Start/End: Original strand, 32835129 - 32835226
Alignment:
Q  197 atagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacgga 294  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32835129 atagaaaacacacacataatttcatcaaaaataacaaaatttatttgttttcttggttattgcaatttctccaaaatggacatgtattttgaaacgga 32835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 13703482 - 13703356
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    |||||||||||||||||||||||| |  ||||||| ||||||| ||||| |||| |||||| |||||||||||||| |||||||||||| ||||||||||    
T  13703482 tccgtttcataatacttgtccattctgaagaataaatttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtgttgtcaataa 13703383  T
Q  131 tacccttgcacatttattgtagagaga 157  Q
    |||||||||| |||||||| |||||||    
T  13703382 tacccttgcatatttattgcagagaga 13703356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 43750398 - 43750279
Alignment:
Q  39 ataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttg 138  Q
    ||||||||||||||||||  |||||||||| ||||| |||| |||| |||||| |||||||||||||| |||||||||||||||||||||||||| ||||    
T  43750398 ataatacttgtccattttttagaataatttggtttctcaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatactcttg 43750299  T
Q  139 cacatttattgtagagagag 158  Q
    || ||||||||| |||||||    
T  43750298 catatttattgttgagagag 43750279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 48820611 - 48820508
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||| |||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  48820611 ctccgtttcataatacttgtccattttaaaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgttttgtcaata 48820512  T
Q  130 atac 133  Q
    ||||    
T  48820511 atac 48820508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 13702884 - 13702769
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||| |||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||    
T  13702884 ttaaaggtattatagaaaacaaacatataatttcatcaaaaatatcaaaatttatttggtttcttggttactgcaatttctccaaaataggcatgtattt 13702785  T
Q  286 tgaaacggagggagta 301  Q
    | ||| ||| ||||||    
T  13702784 taaaatggatggagta 13702769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 27707363 - 27707441
Alignment:
Q  223 aaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  27707363 aaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtatttcgaaacggagggagta 27707441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 18355874 - 18356002
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||  | |||| |||||| |||||||||||||| |||||||||||  || ||||||    
T  18355874 ctccgtttcacaatacttgtccattttgaagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattgatttatcaata 18355973  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    |||||||| |  |||||||||||||||||    
T  18355974 atacccttacttatttattgtagagagag 18356002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 32834995 - 32835123
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||| | | |||| || ||| |||||||||||||| ||||| |||||| |||||||||    
T  32834995 ctccgtttcataatacttgtccattgtagagaataatttcgtttcatagtacttgtcattttcaagtttcaatgcaacattaagtattgttttgtcaata 32835094  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||  | ||| |||||||||||||    
T  32835095 atacccttaaatattaattgtagagagag 32835123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 47 - 158
Target Start/End: Original strand, 31873886 - 31873996
Alignment:
Q  47 tgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacattta 146  Q
    ||||||||||||||||||||||| ||||||||| |||| | |||| |||||||||||||| |||||||||||||||||||| |||||||||  | |||||    
T  31873886 tgtccattttagagaataattttatttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaa-aatacccttatatattta 31873984  T
Q  147 ttgtagagagag 158  Q
    ||| ||||||||    
T  31873985 ttgcagagagag 31873996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 48963390 - 48963262
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||| |||||| ||||| || |||||||||||||||||| ||||| |||  ||  || |||||||||||||||||| ||||||||||||||||||||||    
T  48963390 ctccgattcatattacttatctattttagagaataattttatttcataatatttatcatttttaagtttcaatgcaacattaattattgtcttgtcaata 48963291  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||| ||||  | |||||||||| ||||||    
T  48963290 atatccttatatatttattgtaaagagag 48963262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 48436490 - 48436368
Alignment:
Q  35 tttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacc 134  Q
    ||||| |||| |||||  |||| |||||||||||||||||||| | |||| |||||| |||||||||||||| ||||||||||  ||||||||||||||     
T  48436490 tttcacaatatttgtcacttttggagaataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattagcttgtcaataataca 48436391  T
Q  135 cttgcacatttattgtagagaga 157  Q
    |||    ||||||||||||||||    
T  48436390 cttaattatttattgtagagaga 48436368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 6901831 - 6901725
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||  | |||| ||||||||||||||||||||| |||||| ||||  || ||||||    
T  6901831 ctccgtttcacaata-ttgtccattttggagaataattttgtttcactttacttgtcacttttaagtttcaatgcaacattaatcattgatttatcaata 6901733  T
Q  130 ataccctt 137  Q
    ||| ||||    
T  6901732 atatcctt 6901725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 12094635 - 12094582
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12094635 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 12094582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 19911562 - 19911508
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 302  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  19911562 cttggttactgcaatttctccaaaatgaacatgtattttgaaacggagggagtaa 19911508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 301
Target Start/End: Complemental strand, 37293522 - 37293437
Alignment:
Q  216 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||| |||| ||||||||| || ||||||  ||| ||||||| ||||||||||| ||||| ||||||||||||||||    
T  37293522 tttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaaatggacaagtattgtgaaacggagggagta 37293437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 44277455 - 44277508
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  44277455 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 44277508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 54086818 - 54086716
Alignment:
Q  35 tttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacc 134  Q
    ||||| |||||||||||||||| ||||||| ||||||||||   |  ||| |||||| |||||||||| ||| |||||||||||  || |||||||||||    
T  54086818 tttcacaatacttgtccattttggagaatacttttgtttcattttatttgtcactttcaagtttcaatacaacattaattattgatttatcaataatacc 54086719  T
Q  135 ctt 137  Q
    |||    
T  54086718 ctt 54086716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 38805298 - 38805245
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  38805298 cttggttactgcaatttctctaaaatggacatgtattttaaaacggagggagta 38805245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 26783740 - 26783664
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaa 106  Q
    |||||||| | |||||||||| |||||| ||||||||||||||||||  | |||| |||||| ||||||||||||||    
T  26783740 ctccgttttacaatacttgtctattttaaagaataattttgtttcactttacttgtcactttcaagtttcaatgcaa 26783664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 48820444 - 48820512
Alignment:
Q  216 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 284  Q
    |||||||||||||||||||||||||||||||| |||| ||  | ||||||||||||||  |||||||||    
T  48820444 tttcatcaaaaataacaaaatttatttggtttattggataccgtaatttctccaaaataaacatgtatt 48820512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 52009107 - 52009183
Alignment:
Q  81 cttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagaga 157  Q
    |||| |||||| ||||||| |||||| ||||||||||||||||||||||||| | || |  ||||||||||||||||    
T  52009107 cttgtcactttcaagtttcgatgcaacattaattattgtcttgtcaataataacattacctatttattgtagagaga 52009183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 19897090 - 19897152
Alignment:
Q  187 taagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttct 249  Q
    |||||||||||||||||| ||||| | | |||||| ||||||||||||||||||||| |||||    
T  19897090 taagggtattatagaaaaaacacaaagaatttcataaaaaataacaaaatttatttgatttct 19897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 44276816 - 44276770
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagtaatatt 306  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  44276816 aatttctctaaaatggacatgtattttgaaacggagagagtaatatt 44276770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 48963223 - 48963156
Alignment:
Q  232 aaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||| ||||||| ||| ||||||||  ||||||||||||||| || ||||||||||||||||||||||||    
T  48963223 aaaaattatttgatttattggttag--caatttctccaaaatagatatgtattttgaaacggagggagta 48963156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 19912174 - 19912215
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  19912174 aatttctctaaaatggacatgtattttgaaacggagggagta 19912215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 38806341 - 38806382
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  38806341 aatttctctaaaatggacatgtattttgaaacggagggagta 38806382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 19823928 - 19823894
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatattt 307  Q
    |||||||||||||||||||||||||||||||||||    
T  19823928 tggacatgtattttgaaacggagggagtaatattt 19823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 27706999 - 27707101
Alignment:
Q  34 gtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatac 133  Q
    ||||||||||| || |||||| |  | ||||||||| |||||||||  ||  |||||| || ||| |||| || ||||| ||||||||||||||||||||    
T  27706999 gtttcataatatttatccattctgaaaaataattttatttcacaatatttatcactttcaaattttaatgtaacattaactattgtcttgtcaataatac 27707098  T
Q  134 cct 136  Q
    |||    
T  27707099 cct 27707101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 37781046 - 37780996
Alignment:
Q  192 gtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 242  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  37781046 gtattatagaaaaaacacacagaatttcatcaaaaataataaaatttattt 37780996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 4235803 - 4235751
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||  |||||||||||||||||| || |||||    
T  4235803 cttggttagtgcaatttctccaaaa-cgacatgtattttgaaacgaagtgagta 4235751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 12095423 - 12095464
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  12095423 aatttctctaaaatggacatatattttgaaacggagggagta 12095464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 1455318 - 1455374
Alignment:
Q  194 attatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 250  Q
    ||||||||| | ||||| ||| ||| |||||||||||||||||||||||| ||||||    
T  1455318 attatagaagaaacacaaataattttatcaaaaataacaaaatttatttgatttctt 1455374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 54086668 - 54086577
Alignment:
Q  187 taagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggaca 278  Q
    |||||||||||||||||| | ||| | | ||||||||| ||| |||| ||||||||| || |||||   ||| ||||||| |||||||||||    
T  54086668 taagggtattatagaaaaaatacaaagaatttcatcaataatgacaacatttatttgattccttggcatgtgtaatttcttcaaaatggaca 54086577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 303
Target Start/End: Original strand, 13499569 - 13499599
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaat 303  Q
    |||||||||||||||||||||||||||||||    
T  13499569 tggacatgtattttgaaacggagggagtaat 13499599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 303
Target Start/End: Original strand, 42761717 - 42761747
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaat 303  Q
    |||||||||||||||||||||||||||||||    
T  42761717 tggacatgtattttgaaacggagggagtaat 42761747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 53559802 - 53559880
Alignment:
Q  216 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacgga 294  Q
    |||||||||||||||||| ||||||||| ||||||| |  ||| ||||||| |||||   ||| ||||| |||||||||    
T  53559802 tttcatcaaaaataacaacatttatttgttttcttgatatgtgtaatttcttcaaaagcaacaagtattgtgaaacgga 53559880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 20765224 - 20765187
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatatttata 310  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  20765224 tggacatgtattttaaaacggagggagtattatttata 20765187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 37781151 - 37781082
Alignment:
Q  86 cacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagaga 155  Q
    |||||| || ||||||| |||  ||||||||||  |||||||||||||||||  | ||||||||||||||    
T  37781151 cactttcaaatttcaatccaaagttaattattggtttgtcaataatacccttaaatatttattgtagaga 37781082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 4226759 - 4226716
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacg 292  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||    
T  4226759 cttggttactgcaatttctccaaaa-cgacatgtattttgaaacg 4226716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 6910568 - 6910596
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  6910568 tggacatgtattttgaaacggagggagta 6910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 20765430 - 20765458
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  20765430 tggacatgtattttgaaacggagggagta 20765458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 27010502 - 27010474
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  27010502 tggacatgtattttgaaacggagggagta 27010474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 27010708 - 27010736
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  27010708 tggacatgtattttgaaacggagggagta 27010736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 42490430 - 42490458
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  42490430 tggacatgtattttgaaacggagggagta 42490458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 42761511 - 42761483
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  42761511 tggacatgtattttgaaacggagggagta 42761483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 44562020 - 44562052
Alignment:
Q  275 gacatgtattttgaaacggagggagtaatattt 307  Q
    ||||||||||||||| |||||||||||||||||    
T  44562020 gacatgtattttgaatcggagggagtaatattt 44562052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 30 - 304
Target Start/End: Original strand, 30720498 - 30720772
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| |||| |||||||||||||||||    
T  30720498 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattagttattgtcttgtcaata 30720597  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         |||||||||||||||| |||||||||||||||||||||||||||||    
T  30720598 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataatagatgattaagggtattataaaaaacacacacatattttcatcaaaaata 30720697  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720698 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 30720772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 12806859 - 12807130
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||| ||||||||||||||||||||||    
T  12806859 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtctctttcaagtttcaatgcaacattaattattgtcttgtcaata 12806958  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  12806959 atacccttgcatatttattgtagagagaggaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 12807058  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12807059 acaaaatttatttggtttcttggttaatgcaatttctccaaaatggacatgtattttgaaacggagggagta 12807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 40886616 - 40886887
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  40886616 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 40886715  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||| ||||||||||||||||||||||||    
T  40886716 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaatacacacatattttcatcaaaaata 40886815  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  40886816 acaaaatttattcgatttcttggttagtgcaatttctccaaaatgaacatgtattttgaaacggatggagta 40886887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 10285064 - 10285334
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  10285064 ctccgtttcataatacttgtctattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 10285163  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||| ||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  10285164 atacc-ttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 10285262  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||    
T  10285263 acaaaatttatttagtttcttggttaatgcaatttctccaaaatagacatctattttgaaacggagggagta 10285334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 25773766 - 25773649
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25773766 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaatggacatgtat 25773667  T
Q  284 tttgaaacggagggagta 301  Q
    ||||||||||||||||||    
T  25773666 tttgaaacggagggagta 25773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 36561105 - 36561233
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||| ||||||||||||||||    
T  36561105 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaagtattgtcttgtcaata 36561204  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  36561205 atacccttgcatatttattgtagagagag 36561233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 36561261 - 36561383
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||||||||    
T  36561261 ttaaaggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgattactgcaatttttctaaaatggacatgtattt 36561360  T
Q  286 tgaaacggagggagtaatattta 308  Q
    ||||||||| |||||||||||||    
T  36561361 tgaaacggatggagtaatattta 36561383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 25773920 - 25773795
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||  |||||| |||||||||||||| ||||||||||||||||||||||    
T  25773920 ctccgtttcataatacttgtccattttagagaataagtttgtttcacaatacttatcactttcaagtttcaatgcaacattaattattgtcttgtcaata 25773821  T
Q  130 atacccttgcacatttattgtagaga 155  Q
    ||||||||||| ||||||||||||||    
T  25773820 atacccttgcatatttattgtagaga 25773795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 23097731 - 23097857
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||  ||||| | ||||||||||||||||||||||||||||||||||||    
T  23097731 tccgtttcataatacttgtccattttggagaataattttgtttcacaatacttgttactttcatgtttcaatgcaatattaattattgtcttgtcaataa 23097830  T
Q  131 tacccttgcacatttattgtagagaga 157  Q
    ||||||| || ||||||||||||||||    
T  23097831 tacccttacatatttattgtagagaga 23097857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 25683235 - 25683363
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||  |||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  25683235 ctccgtttcataatacttgtccattttggagaataattttgtttcataaaacttgtcactttcaagtttcaatgcaacattaattattgttttgtcaata 25683334  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    |||||||| || |||||||||||||||||    
T  25683335 atacccttacatatttattgtagagagag 25683363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 186 - 301
Target Start/End: Original strand, 37900786 - 37900901
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||  |||||||    
T  37900786 ttaagggtattatagaaaacacacatataatttcatcaaaaatatcaaaatttatttagtttcttggttactgcaatttctccaaaatggatgtgtattt 37900885  T
Q  286 tgaaacggagggagta 301  Q
    ||||||||||||||||    
T  37900886 tgaaacggagggagta 37900901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 37900630 - 37900755
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    |||||||||||||||||||| |||||  |||||||||||||||||| || |||| |||||| |||||||||||||| |||||||||||||||||||||||    
T  37900630 tccgtttcataatacttgtctattttgaagaataattttgtttcacgatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataa 37900729  T
Q  131 tacccttgcacatttattgtagagag 156  Q
    |||||||||| |||||||| ||||||    
T  37900730 tacccttgcatatttattgcagagag 37900755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 16983524 - 16983401
Alignment:
Q  34 gtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatac 133  Q
    |||| |||||||||||| |||||  ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  16983524 gttttataatacttgtctattttgaagaataattttgtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtcttttcaataatac 16983425  T
Q  134 ccttgcacatttattgtagagaga 157  Q
    ||||||| || ||||| |||||||    
T  16983424 ccttgcatatctattgcagagaga 16983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 186 - 290
Target Start/End: Original strand, 7277584 - 7277688
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  7277584 ttaaaggtattatagaaaacacacacataatttgatcaaaaataacaaaatttatttggtttattggttactccaatttctccaaaatagacatgtattt 7277683  T
Q  286 tgaaa 290  Q
    |||||    
T  7277684 tgaaa 7277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 16983375 - 16983258
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat--ttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    ||||||||||| ||||||| ||||| ||  |||||||||||| || ||||   ||||||||||||||||||| |||||||||||||||||||||||||||    
T  16983375 ttaagggtattgtagaaaaaacacatatcatttcatcaaaaaaaaaaaaaaaattatttggtttcttggttactgcaatttctccaaaatggacatgtat 16983276  T
Q  284 tttgaaacggagggagta 301  Q
    |||||||| |||||||||    
T  16983275 tttgaaacagagggagta 16983258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 25683390 - 25683467
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 263  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  25683390 ttaagggtattatagaaaacacacacataattttatcaaaaataacaaaatttatttggtttcttggttattgcaatt 25683467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 39071153 - 39071025
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||| |||| |||||||||| ||||| |||||||||||||||||||  | |||| ||||||||||| ||||||||| |||||||||||  || ||||||    
T  39071153 ctccgattcacaatacttgtctatttttgagaataattttgtttcactttacttgtcacttttaagtatcaatgcaacattaattattggtttatcaata 39071054  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    || | ||| |  |||||||||||||||||    
T  39071053 atccacttacctatttattgtagagagag 39071025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 11319826 - 11319700
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  |  ||  |||||| | |||| |||||||||||||||||||  || | |||||    
T  11319826 tccgtttcataatacttgtctattttagagaataattttgtttcactttatttatcactttcaggttttaatgcaatattaattattggtttattaataa 11319727  T
Q  131 tacccttgcacatttattgtagagaga 157  Q
    ||| ||| |  ||||||||||||||||    
T  11319726 tactcttacctatttattgtagagaga 11319700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 734347 - 734448
Alignment:
Q  32 ccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataat 131  Q
    |||||||| |||||||||||||||| |||||||||||||||||||  | |||| |||||| |||||||||| ||| |||||||||||  || ||||||||    
T  734347 ccgtttcacaatacttgtccattttggagaataattttgtttcactttacttgtcactttcaagtttcaatacaacattaattattggtttatcaataat 734446  T
Q  132 ac 133  Q
    ||    
T  734447 ac 734448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 734501 - 734625
Alignment:
Q  187 taagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatttt 286  Q
    |||||||||||||||||| ||||| | | ||||||||| ||| |||||||||||||| ||  |||||  | | ||||||| ||||||||||| ||||| |    
T  734501 taagggtattatagaaaa-acacaaagaatttcatcaataatgacaaaatttatttgattctttggtatgagtaatttcttcaaaatggacaagtattgt 734599  T
Q  287 gaaacggagggagtaatatttatacc 312  Q
    |||||||||||| || ||||||||||    
T  734600 gaaacggagggaatattatttatacc 734625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 16054377 - 16054254
Alignment:
Q  35 tttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacc 134  Q
    ||||| ||||| ||||  |||| ||||||||||||| |||||  || ||| |||||| |||||||||||||| ||||||||||   ||||||||||||||    
T  16054377 tttcaaaatacatgtcgcttttggagaataattttggttcactttggttgtcactttcaagtttcaatgcaacattaattattagtttgtcaataatacc 16054278  T
Q  135 cttgcacatttattgtagagagag 158  Q
    |||    |||||||||||||||||    
T  16054277 cttatctatttattgtagagagag 16054254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 30402981 - 30403075
Alignment:
Q  43 tacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataataccctt 137  Q
    ||||||||  ||||||||||||||||| |||||   | |||| ||||||||||||||||| ||| |||||||||||  |||||||||||||||||    
T  30402981 tacttgtcgcttttagagaataattttatttcattttacttgtcacttttaagtttcaatacaaaattaattattggtttgtcaataataccctt 30403075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 301
Target Start/End: Original strand, 15305216 - 15305265
Alignment:
Q  252 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15305216 gttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 15305265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 23098396 - 23098461
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 251  Q
    ||||||||||||||| |||||  |||||| ||||||||||||||||||||||||||| ||||||||    
T  23098396 ttaagggtattataggaaacatgcacataatttcatcaaaaataacaaaatttatttagtttcttg 23098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 7277486 - 7277557
Alignment:
Q  87 acttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagagag 158  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| ||||| |  |||||||||||| ||||    
T  7277486 acttttaaatttcaatgcaaaattaattattgtcttgtcaataatgcccttacttatttattgtagatagag 7277557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 30403121 - 30403191
Alignment:
Q  184 gattaagggtattatagaaaacaca-cacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    ||||||| ||||||||||||| | | |||| | ||||||||||||||||||||||||||||||||||||||    
T  30403121 gattaagagtattatagaaaaaaaaacacagaatttcatcaaaaataacaaaatttatttggtttcttggt 30403191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 39070997 - 39070883
Alignment:
Q  187 taagggtattatagaaaacacaca-catattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||||||||||||||||| ||||| || |||| |||||||||| |||| ||||||||| || |||  |  ||| ||||||| ||||||| ||| |||||     
T  39070997 taagggtattatagaaaaaacacaacagattt-catcaaaaatgacaacatttatttgattccttaatatgtgtaatttcttcaaaatgaacaagtattg 39070899  T
Q  286 tgaaacggagggagta 301  Q
    ||||||||||||||||    
T  39070898 tgaaacggagggagta 39070883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 1056631 - 1056756
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||| ||||||||||  |||| |||||||||||| |||||  ||   |  |||||| |||||||||||||| ||||||||||   |||||||||    
T  1056631 ctccgtttcacaatacttgtcacttttggagaataattttatttca--attactatcactttcaagtttcaatgcaacattaattattagtttgtcaata 1056728  T
Q  130 atacccttgcacatttattgtagagaga 157  Q
    |||| |||    ||||||||||||||||    
T  1056729 atactcttatttatttattgtagagaga 1056756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 307
Target Start/End: Complemental strand, 11319673 - 11319553
Alignment:
Q  187 taagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatttt 286  Q
    |||||||||||||||||| | ||| | | |||||| |||||| |||| ||||||||| ||  || ||  ||| ||||||| |||||||||||  |||| |    
T  11319673 taagggtattatagaaaaaaaacaaagaatttcataaaaaattacaacatttatttgattcattagtatgtgtaatttcttcaaaatggacaaatattgt 11319574  T
Q  287 gaaacggagggagtaatattt 307  Q
    |||||||||| |||| |||||    
T  11319573 gaaacggaggaagtattattt 11319553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 26168178 - 26168075
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    |||||||||  |||| ||||  ||||||||||||||||||||||||  |  ||| |||||| |||||||||||||| |||||| |||   |||| |||||    
T  26168178 tccgtttcacgatacatgtcgtttttagagaataattttgtttcactttaattgtcactttcaagtttcaatgcaagattaatgatttgtttgttaataa 26168079  T
Q  131 tacc 134  Q
    ||||    
T  26168078 tacc 26168075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 8086264 - 8086301
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatatttata 310  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  8086264 tggacatgtattttgaaacggagggagtattatttata 8086301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 15304863 - 15304822
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  15304863 aatttctctaaaatggacatgtattttaaaacggagggagta 15304822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 11796559 - 11796451
Alignment:
Q  193 tattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacg 292  Q
    |||||||||| | ||||| | | |||||||||||||||||||||| ||||  |||||||||   || ||||||| |||||  |||| ||| | ||||| |    
T  11796559 tattatagaacaaacacatagaatttcatcaaaaataacaaaattaatttaatttcttggtatctgtaatttcttcaaaaatgacaagtagtgtgaaaag 11796460  T
Q  293 gagggagta 301  Q
    |||||||||    
T  11796459 gagggagta 11796451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 304
Target Start/End: Original strand, 33387453 - 33387484
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaata 304  Q
    ||||||||||||||||||||||||||||||||    
T  33387453 tggacatgtattttgaaacggagggagtaata 33387484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 11795314 - 11795392
Alignment:
Q  55 ttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatac 133  Q
    ||||||||||||||||||||||  |  ||  |||||| |||||||||||||| ||||||||| |  || ||||||||||    
T  11795314 ttagagaataattttgtttcactttatttatcactttcaagtttcaatgcaacattaattataggtttatcaataatac 11795392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 301
Target Start/End: Complemental strand, 25683267 - 25683229
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  25683267 ttctccaaaatggacaagtattatgaaacggagggagta 25683229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 978311 - 978340
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaa 302  Q
    ||||||||||||||||||||||||||||||    
T  978311 tggacatgtattttgaaacggagggagtaa 978340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 12305728 - 12305687
Alignment:
Q  97 ttcaatgcaatattaattattgtcttgtcaataatacccttg 138  Q
    |||||||||| ||| |||||||| ||||||||||||||||||    
T  12305728 ttcaatgcaacattgattattgttttgtcaataatacccttg 12305687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 40156226 - 40156189
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatatttata 310  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  40156226 tggatatgtattttgaaacggagggagtagtatttata 40156189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 978105 - 978077
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  978105 tggacatgtattttgaaacggagggagta 978077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 9502655 - 9502627
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  9502655 tggacatgtattttgaaacggagggagta 9502627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 14634185 - 14634157
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  14634185 tggacatgtattttgaaacggagggagta 14634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 303
Target Start/End: Original strand, 24992374 - 24992402
Alignment:
Q  275 gacatgtattttgaaacggagggagtaat 303  Q
    |||||||||||||||||||||||||||||    
T  24992374 gacatgtattttgaaacggagggagtaat 24992402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 34201454 - 34201494
Alignment:
Q  97 ttcaatgcaatattaattattgtcttgtcaataataccctt 137  Q
    |||||||||||||||| || ||| |||||||||||||||||    
T  34201454 ttcaatgcaatattaactactgttttgtcaataataccctt 34201494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 40886648 - 40886604
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagtaatattt 307  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||    
T  40886648 ttctctaaaatggacaagtattatgaaacggagggagtagtattt 40886604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 30 - 301
Target Start/End: Complemental strand, 10981779 - 10981508
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  10981779 ctccatttcataatatttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 10981680  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  10981679 atacccttgcatatttattgtagagagagagaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 10981580  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981579 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 10981508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 30 - 301
Target Start/End: Complemental strand, 27814082 - 27813811
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  27814082 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtgttgtcaata 27813983  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||| ||||||||||||||||||||    
T  27813982 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacatacatattttcatcaaaaata 27813883  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27813882 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 27813811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 30 - 299
Target Start/End: Original strand, 36453130 - 36453399
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  36453130 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 36453229  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||| ||||||||||||||||||||||||    
T  36453230 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaaaacacacatattttcatcaaaaata 36453329  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 299  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36453330 ataaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 36453399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 30 - 303
Target Start/End: Original strand, 25614359 - 25614630
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  25614359 ctccgtttcataataattgtccattttagagaataattttgtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtcttgtcaata 25614458  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         |||||||||||||  |||||  ||||||||||||||||||||||||    
T  25614459 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtatttcagaaa--acacacatattttcatcaaaaata 25614556  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 303  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25614557 acaaaatttatttggttttttggttagtgcaatttctccaaaatggacatgtattttgaaacggaaggagtaat 25614630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 40349077 - 40348960
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40349077 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaatggacatgtat 40348978  T
Q  284 tttgaaacggagggagta 301  Q
    ||||||||||| ||||||    
T  40348977 tttgaaacggaaggagta 40348960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 47110566 - 47110449
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47110566 gattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttattttgtttcttggttagtgcaatttctccaaaatggacatgtat 47110469  T
Q  284 tttgaaacggagggagtaat 303  Q
    ||||||| ||||||||||||    
T  47110468 tttgaaatggagggagtaat 47110449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 47110721 - 47110593
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  47110721 ctccgtttcataatacttattcattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 47110622  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  47110621 atacccttgcatatttattgtagagagag 47110593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 40349232 - 40349105
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||| | |||||||    
T  40349232 ctccgtttcataatacttgtccattttagagaataattt-gtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtttggtcaata 40349134  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  40349133 atacccttgcatatttattgtagagagag 40349105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 3091755 - 3091657
Alignment:
Q  59 agaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagaga 157  Q
    ||||||||||||||||||  | |||| || |||||||||||||||||| ||||| |||||  ||||||||||||||||| || ||||||||||||||||    
T  3091755 agaataattttgtttcactttacttgtcatttttaagtttcaatgcaacattaaatattggtttgtcaataatacccttacatatttattgtagagaga 3091657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 153
Target Start/End: Original strand, 27941013 - 27941113
Alignment:
Q  53 ttttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtag 152  Q
    |||| ||||| |||||||||||||| | |||| |||||| |||||||| ||||| ||||||||||| |||||||||||||||||| |  |||||||||||    
T  27941013 ttttggagaacaattttgtttcacattacttgtcactttcaagtttcattgcaacattaattattggcttgtcaataatacccttacttatttattgtag 27941112  T
Q  153 a 153  Q
    |    
T  27941113 a 27941113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 25060133 - 25060186
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25060133 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 25060186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 16662364 - 16662236
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||| ||||| ||||||||||  ||||  ||||||||||||||| | | | |||| |||||| |||||||||||||| |||||||||||  |||||| ||    
T  16662364 ctccatttcacaatacttgtcacttttgaagaataattttgttttaaattacttgtcactttcaagtttcaatgcaacattaattattgatttgtcatta 16662265  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    |||||||| |  |||||||||||| ||||    
T  16662264 atacccttacctatttattgtagatagag 16662236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 17636724 - 17636596
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||| ||||| ||||||||||  ||||  ||||||||||||||| | | | |||| |||||| |||||||||||||| |||||||||||  |||||| ||    
T  17636724 ctccatttcacaatacttgtcacttttgaagaataattttgttttaaattacttgtcactttcaagtttcaatgcaacattaattattgatttgtcatta 17636625  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    |||||||| |  |||||||||||| ||||    
T  17636624 atacccttacctatttattgtagatagag 17636596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 2911548 - 2911601
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  2911548 cttggttactgcaatttctccaaaatggacatgtattttgaaatggagggagta 2911601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 3091632 - 3091565
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    ||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||| ||| |||||    
T  3091632 ttaagggtattatagaaaaaacacaaagaatttcatcaaaaataacaaaatttatttgattttttggt 3091565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 7743558 - 7743625
Alignment:
Q  185 attaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    ||||| |||||||||||||  | ||||||| |||||||||||||||||||||||||||| | |||||||    
T  7743558 attaacggtattatagaaagaa-acacataatttcatcaaaaataacaaaatttatttgatatcttggt 7743625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 6737294 - 6737252
Alignment:
Q  97 ttcaatgcaatattaattattgtcttgtcaataatacccttgc 139  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  6737294 ttcaatgcaatattaattattgttttatcaataatacccttgc 6737252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 16360497 - 16360442
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 243  Q
    ||||||||||||||||||| ||||| |   ||||||||||||||||||||||||||||    
T  16360497 ttaagggtattatagaaaaaacacagaa--tttcatcaaaaataacaaaatttatttg 16360442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 16662209 - 16662146
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 251  Q
    |||||||||||||| |||| ||||| ||  |||||||||||||||||||||||||||  |||||||    
T  16662209 ttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 16662146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 17636569 - 17636506
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 251  Q
    |||||||||||||| |||| ||||| ||  |||||||||||||||||||||||||||  |||||||    
T  17636569 ttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 17636506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 37983241 - 37983179
Alignment:
Q  216 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggaca 278  Q
    |||||||||||||||||||||||||||| ||||||| |  ||| ||||||  |||||||||||    
T  37983241 tttcatcaaaaataacaaaatttatttgatttcttgatatgtgtaatttcctcaaaatggaca 37983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 41480679 - 41480639
Alignment:
Q  97 ttcaatgcaatattaattattgtcttgtcaataataccctt 137  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  41480679 ttcaatgcaatattaactattgttttgtcaataataccctt 41480639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 8380153 - 8380082
Alignment:
Q  86 cacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagaga 157  Q
    ||||||||||||||||| ||| |||| ||||||  |||| || ||||||||| |  ||||||||||||||||    
T  8380153 cacttttaagtttcaatacaacattagttattggtttgttaaaaatacccttacttatttattgtagagaga 8380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 25059491 - 25059456
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggag 295  Q
    |||||||| |||||||||||||||||||||||||||    
T  25059491 aatttctctaaaatggacatgtattttgaaacggag 25059456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 27942201 - 27942256
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 241  Q
    |||| |||||||||||||| ||||||||| | |||| |||||||| ||||||||||    
T  27942201 ttaaaggtattatagaaaaaacacacataatctcattaaaaataaaaaaatttatt 27942256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 41898222 - 41898257
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatattta 308  Q
    ||||||||||||||||||||||||||||| ||||||    
T  41898222 tggacatgtattttgaaacggagggagtattattta 41898257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 304
Target Start/End: Complemental strand, 47156055 - 47156024
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaata 304  Q
    ||||||||||||||||||||||||||||||||    
T  47156055 tggacatgtattttgaaacggagggagtaata 47156024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 24456800 - 24456898
Alignment:
Q  59 agaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagaga 157  Q
    ||||||||||||||| ||  | |||| |||| | |||||||||||||| ||||| || |   || ||||||||||||||||  || |||||||||||||    
T  24456800 agaataattttgtttaactttacttgtcactctcaagtttcaatgcaacattaactactaatttatcaataatacccttgcctatgtattgtagagaga 24456898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 28061543 - 28061509
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatattt 307  Q
    ||||||||||||||||||||||||||||| |||||    
T  28061543 tggacatgtattttgaaacggagggagtattattt 28061509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 46103398 - 46103364
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatattt 307  Q
    ||||||||||||||||||||||||||||| |||||    
T  46103398 tggacatgtattttgaaacggagggagtactattt 46103364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 2910900 - 2910859
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||  ||||| |||||||||||||||||||||||||||    
T  2910900 aatttctttaaaatagacatgtattttgaaacggagggagta 2910859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 36623336 - 36623307
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaa 302  Q
    ||||||||||||||||||||||||||||||    
T  36623336 tggacatgtattttgaaacggagggagtaa 36623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 310
Target Start/End: Complemental strand, 48602460 - 48602427
Alignment:
Q  277 catgtattttgaaacggagggagtaatatttata 310  Q
    ||||||||||||||||||||||||| ||||||||    
T  48602460 catgtattttgaaacggagggagtagtatttata 48602427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 295
Target Start/End: Complemental strand, 8380060 - 8379948
Alignment:
Q  184 gattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgta 282  Q
    ||||| ||||||||||||||| | |||| | |  ||||| || |||||||||||||||||| |||||| ||   || ||||||  |||||| |||| |||    
T  8380060 gattaggggtattatagaaaaaagcacaaaaaagttcattaacaataacaaaatttatttgatttcttagtatatgtaatttcctcaaaatcgacaagta 8379961  T
Q  283 ttttgaaacggag 295  Q
    || ||||||||||    
T  8379960 ttgtgaaacggag 8379948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 16778533 - 16778505
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  16778533 tggacatgtattttgaaacggagggagta 16778505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 20885131 - 20885103
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  20885131 tggacatgtattttgaaacggagggagta 20885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 25566576 - 25566548
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  25566576 tggacatgtattttgaaacggagggagta 25566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 28061749 - 28061777
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  28061749 tggacatgtattttgaaacggagggagta 28061777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 36623542 - 36623570
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  36623542 tggacatgtattttgaaacggagggagta 36623570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 38852081 - 38852109
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  38852081 tggacatgtattttgaaacggagggagta 38852109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 41898016 - 41897988
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  41898016 tggacatgtattttgaaacggagggagta 41897988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 42877414 - 42877386
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  42877414 tggacatgtattttgaaacggagggagta 42877386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 46103597 - 46103625
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  46103597 tggacatgtattttgaaacggagggagta 46103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 47156261 - 47156289
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  47156261 tggacatgtattttgaaacggagggagta 47156289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 1e-90; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 30 - 301
Target Start/End: Original strand, 24706253 - 24706524
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||| ||||||||||||||||||||||    
T  24706253 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaata 24706352  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  24706353 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 24706452  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24706453 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggatggagta 24706524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 30 - 301
Target Start/End: Complemental strand, 44569108 - 44568837
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| | |||||||||||| ||||||||||||||||||||||    
T  44569108 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcatgtttcaatgcaacattaattattgtcttgtcaata 44569009  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         |||||||||||||||||||||||||||||||||||||| |||||||    
T  44569008 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaata 44568909  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  44568908 acaaaatttatttggttttttggttagtgcaatttcttcaaaatggacatgtattttgaaacggaaggagta 44568837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 21310542 - 21310425
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310542 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 21310443  T
Q  284 tttgaaacggagggagta 301  Q
    ||||||||||||||||||    
T  21310442 tttgaaacggagggagta 21310425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 25704768 - 25704651
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25704768 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 25704669  T
Q  284 tttgaaacggagggagta 301  Q
    ||||||||||||||||||    
T  25704668 tttgaaacggagggagta 25704651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 14261160 - 14261044
Alignment:
Q  185 attaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 284  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14261160 attaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 14261061  T
Q  285 ttgaaacggagggagta 301  Q
    |||||||||||||||||    
T  14261060 ttgaaacggagggagta 14261044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 12071678 - 12071561
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  12071678 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttattggttagtgcaatttctccaaaatggacatgtat 12071579  T
Q  284 tttgaaacggagggagta 301  Q
    ||||||||||||||||||    
T  12071578 tttgaaacggagggagta 12071561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 22321427 - 22321544
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22321427 gattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 22321526  T
Q  284 tttgaaacggagggagta 301  Q
    ||||||||||| ||||||    
T  22321527 tttgaaacggaaggagta 22321544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 21310692 - 21310565
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  21310692 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 21310593  T
Q  130 atacccttgcacatttattgtagagaga 157  Q
    ||||||||||| ||||||||||||||||    
T  21310592 atacccttgcatatttattgtagagaga 21310565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 40122493 - 40122620
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  40122493 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 40122592  T
Q  130 atacccttgcacatttattgtagagaga 157  Q
    ||||||||||| ||||||||||||||||    
T  40122593 atacccttgcatatttattgtagagaga 40122620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 186 - 301
Target Start/End: Original strand, 40122647 - 40122762
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  40122647 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggttttttggttactgcaatttctccaaaatggacatgtattt 40122746  T
Q  286 tgaaacggagggagta 301  Q
    ||||||||||||||||    
T  40122747 tgaaacggagggagta 40122762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 34324742 - 34324860
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaattta-tttggtttcttggttagtgcaatttctccaaaatggacatgta 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  34324742 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttaatttagtttcttggttagtgcaatttctccaaaatggacatgta 34324841  T
Q  283 ttttgaaacggagggagta 301  Q
    |||||||||||||||||||    
T  34324842 ttttgaaacggagggagta 34324860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 12071831 - 12071703
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||| ||||||||||||||    
T  12071831 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattcttgtcttgtcaata 12071732  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  12071731 atacccttgcatatttattgtagagagag 12071703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 14261315 - 14261187
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||| ||||||||||||||||||||||    
T  14261315 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaata 14261216  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  14261215 atacccttgcatatttattgtagagagag 14261187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 22321274 - 22321402
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  22321274 ctccgtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 22321373  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  22321374 atacccttgcatatttattgtagagagag 22321402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 25704922 - 25704795
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| ||||| ||||||||||||||||||||||    
T  25704922 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcagtgcaacattaattattgtcttgtcaata 25704823  T
Q  130 atacccttgcacatttattgtagagaga 157  Q
    ||||||||||| ||||||||||||||||    
T  25704822 atacccttgcatatttattgtagagaga 25704795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 186 - 306
Target Start/End: Original strand, 21661697 - 21661817
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21661697 ttaaaggtattatagaaaacacacacatattttcatcaaaaataataaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtattt 21661796  T
Q  286 tgaaacggagggagtaatatt 306  Q
    ||||| |||||||||| ||||    
T  21661797 tgaaagggagggagtattatt 21661817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 186 - 306
Target Start/End: Original strand, 21670461 - 21670581
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21670461 ttaaaggtattatagaaaacacacacatattttcatcaaaaataaaaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtattt 21670560  T
Q  286 tgaaacggagggagtaatatt 306  Q
    ||||| |||||||||| ||||    
T  21670561 tgaaagggagggagtattatt 21670581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 20249017 - 20249148
Alignment:
Q  27 tcactccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtca 126  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| | || | |||| ||||||||||||||||||||||||||||||||||    
T  20249017 tcactccgtttcataatacttgtccattttggagaataattttgtttcacaatacctgtctctttcaagtttcaatgcaatattaattattgtcttgtca 20249116  T
Q  127 ataatacccttgcacatttattgtagagagag 158  Q
    ||||||||||| || |||||||||||||||||    
T  20249117 ataatacccttacatatttattgtagagagag 20249148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 21661541 - 21661669
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||  |||||| |||||||||||||| ||||| ||||||||||||||||    
T  21661541 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgcaacattaagtattgtcttgtcaata 21661640  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  21661641 atacccttgcatatttattgtagagagag 21661669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 21670305 - 21670433
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||  |||||| |||||||||||||| ||||| ||||||||||||||||    
T  21670305 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgcaacattaagtattgtcttgtcaata 21670404  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  21670405 atacccttgcatatttattgtagagagag 21670433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 50768129 - 50768006
Alignment:
Q  34 gtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatac 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  50768129 gtttcataatacttgtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 50768030  T
Q  134 ccttgcacatttattgtagagaga 157  Q
    |||| || ||||||||||||||||    
T  50768029 ccttacatatttattgtagagaga 50768006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 50767980 - 50767871
Alignment:
Q  185 attaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 284  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | |||||||    
T  50767980 attaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttgattagtgcaatttctctaaaatgaatatgtatt 50767881  T
Q  285 ttgaaacgga 294  Q
    ||||||||||    
T  50767880 ttgaaacgga 50767871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 304
Target Start/End: Original strand, 20249175 - 20249292
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||    
T  20249175 ttaagggtattatagaaa-cacacacataatttcttcaaaaataacaaaatttatttggtttcttggttaatacaatttatccaaaatggacatgtattt 20249273  T
Q  286 tgaaacggagggagtaata 304  Q
    |||||||||| ||||||||    
T  20249274 tgaaacggagagagtaata 20249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 21065032 - 21064905
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||  | |||| || ||||||||||| |||||||||||||||| |||||    
T  21065032 ctccgtttcataatacttgttcattttagagaataattttgtttcacaatacttatcgctttcaaatttcaatgcaacattaattattgtcttgacaata 21064933  T
Q  130 atacccttgcacatttattgtagagaga 157  Q
    |||| ||| || ||||||||||||||||    
T  21064932 atactcttacatatttattgtagagaga 21064905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 31892493 - 31892375
Alignment:
Q  40 taatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgc 139  Q
    ||||||||||| || || |||||||||||||||| ||||| |||| ||||||||||||| |||| || ||||||||||||||||||||||||| ||||||    
T  31892493 taatacttgtctatcttggagaataattttgttttacaatacttgtcacttttaagttttaatgtaacattaattattgtcttgtcaataatagccttgc 31892394  T
Q  140 acatttattgtagagagag 158  Q
    | |||||||| | ||||||    
T  31892393 atatttattgcaaagagag 31892375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 1988150 - 1988036
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||| |||| |||||||||||| |||| ||||| |||||    
T  1988150 ttaagggtattatagaaaacacatacataatttcatcaaaaataataaaatttatttgatttcttagttactgcaatttctcc-aaatagacatatattt 1988052  T
Q  286 tgaaacggagggagta 301  Q
    | |||| || ||||||    
T  1988051 taaaacagatggagta 1988036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 19692992 - 19692865
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||||  | |||| |||||| |||||||||||||| |||||||||||  || |||||||    
T  19692992 tccgtatcacaatacttgtctattttagagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataa 19692893  T
Q  131 tacccttgcacatttattgtagagagag 158  Q
     |||||| |  |||||||||||||||||    
T  19692892 cacccttacttatttattgtagagagag 19692865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 19703577 - 19703450
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||||  | |||| |||||| |||||||||||||| |||||||||||  || |||||||    
T  19703577 tccgtatcacaatacttgtctattttagagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataa 19703478  T
Q  131 tacccttgcacatttattgtagagagag 158  Q
     |||||| |  |||||||||||||||||    
T  19703477 cacccttacttatttattgtagagagag 19703450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 18507271 - 18507400
Alignment:
Q  29 actccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaat 128  Q
    |||| |||||| ||||||||||  |||||||| |||||||||||||||| | |||| |||||| |||||||||||||| ||||||||||| |||||||||    
T  18507271 actctgtttcacaatacttgtcgcttttagagcataattttgtttcacatttcttgtcactttcaagtttcaatgcaacattaattattgacttgtcaat 18507370  T
Q  129 aatacccttgcacatttattgtagagagag 158  Q
    ||||  ||| |  ||||||| |||||||||    
T  18507371 aatattcttacttatttattatagagagag 18507400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 191 - 299
Target Start/End: Complemental strand, 31892344 - 31892240
Alignment:
Q  191 ggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaa 290  Q
    ||||||||||||||    |||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||||||  |||||| ||||||||||||| |    
T  31892344 ggtattatagaaaa----cacataatttcatcaaaaataataaaatttatttgatttcttggttactgcaatttctttaaaatgaacatgtattttgata 31892249  T
Q  291 cggagggag 299  Q
    |||||||||    
T  31892248 cggagggag 31892240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 34324653 - 34324717
Alignment:
Q  94 agtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagagag 158  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  34324653 agtttcaatgcaacattaatgattttcttgtcaataatacccttgcatatttattgtagagagag 34324717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 6128956 - 6129083
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||||||| ||||| ||||  ||||  |||||||||||||||||   | |||| |||||| |||||||||||||| |||||||||||  || |||||||    
T  6128956 tccgtttcacaatacatgtcgcttttgaagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataa 6129055  T
Q  131 tacccttgcacatttattgtagagagag 158  Q
    |||||||    |||||||||||||||||    
T  6129056 tacccttatctatttattgtagagagag 6129083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 304
Target Start/End: Original strand, 26676729 - 26676846
Alignment:
Q  187 taagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatttt 286  Q
    |||||||||||||||||| ||||  | | |||||| |||||| |||| ||||||||| || ||||||  ||| ||||||| ||||||||| | ||||| |    
T  26676729 taagggtattatagaaaaaacacgaagaatttcataaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaaatggataagtattgt 26676828  T
Q  287 gaaacggagggagtaata 304  Q
    ||||||||| ||||||||    
T  26676829 gaaacggagagagtaata 26676846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 50839037 - 50839125
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattg 118  Q
    |||| ||||| ||||||||||  |||| |||||||||||||||||||| | |||| || ||| |||||||||||||| |||||||||||    
T  50839037 ctccatttcacaatacttgtcgcttttggagaataattttgtttcacattacttgtcattttcaagtttcaatgcaacattaattattg 50839125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 20714514 - 20714577
Alignment:
Q  191 ggtattatagaaaa-cacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  20714514 ggtattatagaaaaacacacacatagtttcatcaaaaataacaaaatttatttgatttattggt 20714577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 32543746 - 32543643
Alignment:
Q  34 gtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatac 133  Q
    |||||| ||||||||||  |||||||||||||||||||||||   | ||||  ||||| |||||| ||||| | |||||||||||  |||||| ||||||    
T  32543746 gtttcacaatacttgtcgcttttagagaataattttgtttcattttacttgttactttcaagttttaatgcgacattaattattggtttgtcattaatac 32543647  T
Q  134 cctt 137  Q
    ||||    
T  32543646 cctt 32543643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 6129108 - 6129225
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    ||||||||||||| ||||||| | ||| | | ||| |||||||||||||||||||||||| ||||||| |  ||| ||||||  ||||   || | ||||    
T  6129108 gattaagggtattgtagaaaaaatacaaagaattttatcaaaaataacaaaatttatttgatttcttgatatgtgtaatttcatcaaaggcgataagtat 6129207  T
Q  284 tttgaaacggagggagta 301  Q
    | ||||||||||||||||    
T  6129208 tatgaaacggagggagta 6129225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 34284178 - 34284234
Alignment:
Q  185 attaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 241  Q
    |||||||||||||||||||| | ||| ||| ||||||||||| ||||||||||||||    
T  34284178 attaagggtattatagaaaaaatacaaatagtttcatcaaaagtaacaaaatttatt 34284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 19433386 - 19433351
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatattta 308  Q
    ||||||||||||||||||||||||||||||||||||    
T  19433386 tggacatgtattttgaaacggagggagtaatattta 19433351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 286
Target Start/End: Complemental strand, 19361700 - 19361662
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtatttt 286  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19361700 cttggttactgcaatttctccaaaatggacatgtatttt 19361662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 19692837 - 19692723
Alignment:
Q  187 taagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatttt 286  Q
    ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||  ||||||| ||||||||| |  |||| |    
T  19692837 taaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatttcttcaaaatggagaattattgt 19692738  T
Q  287 gaaacggagggagta 301  Q
    ||||| |||| ||||    
T  19692737 gaaacagaggaagta 19692723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 19703422 - 19703308
Alignment:
Q  187 taagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatttt 286  Q
    ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||  ||||||| ||||||||| |  |||| |    
T  19703422 taaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatttcttcaaaatggagaattattgt 19703323  T
Q  287 gaaacggagggagta 301  Q
    ||||| |||| ||||    
T  19703322 gaaacagaggaagta 19703308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 32543597 - 32543532
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 250  Q
    |||||||||||||||| |||| ||||| | | ||||||||||| |||||||| ||||||||||||||    
T  32543597 gattaagggtattataaaaaa-acacaaagaatttcatcaaaattaacaaaaattatttggtttctt 32543532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 48652305 - 48652268
Alignment:
Q  216 tttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    |||||||||||||||||||||||||||| |||||||||    
T  48652305 tttcatcaaaaataacaaaatttatttgatttcttggt 48652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 305
Target Start/End: Original strand, 55209808 - 55209840
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatat 305  Q
    |||||||||||||||||||||||||||||||||    
T  55209808 tggacatgtattttgaaacggagggagtaatat 55209840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 304
Target Start/End: Original strand, 2760961 - 2760992
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaata 304  Q
    ||||||||||||||||||||||||||||||||    
T  2760961 tggacatgtattttgaaacggagggagtaata 2760992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 303
Target Start/End: Complemental strand, 2760758 - 2760728
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaat 303  Q
    |||||||||||||||||||||||||||||||    
T  2760758 tggacatgtattttgaaacggagggagtaat 2760728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 18507430 - 18507472
Alignment:
Q  191 ggtattatagaaaacacacacatattttcatcaaaaataacaa 233  Q
    |||||||||||||| ||||||| | ||||||||||||||||||    
T  18507430 ggtattatagaaaaaacacacaaaatttcatcaaaaataacaa 18507472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 19362189 - 19362223
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacgga 294  Q
    |||||||| ||||||||||||||||||||||||||    
T  19362189 aatttctctaaaatggacatgtattttgaaacgga 19362223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 20249052 - 20249006
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagtaatatttat 309  Q
    |||||||||||||||| ||||| |||||||||| ||||| |||||||    
T  20249052 ttctccaaaatggacaagtattatgaaacggagtgagtattatttat 20249006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 303
Target Start/End: Complemental strand, 55209602 - 55209572
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaat 303  Q
    |||||||||||||||||||||||||||||||    
T  55209602 tggacatgtattttgaaacggagggagtaat 55209572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 4467548 - 4467520
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  4467548 tggacatgtattttgaaacggagggagta 4467520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 12071799 - 12071839
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagtaat 303  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  12071799 ttctctaaaatggacaagtattatgaaacggagggagtaat 12071839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 26170014 - 26169986
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  26170014 tggacatgtattttgaaacggagggagta 26169986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 26170221 - 26170249
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  26170221 tggacatgtattttgaaacggagggagta 26170249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 29830371 - 29830343
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  29830371 tggacatgtattttgaaacggagggagta 29830343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 35381128 - 35381156
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  35381128 tggacatgtattttgaaacggagggagta 35381156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 38416678 - 38416650
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  38416678 tggacatgtattttgaaacggagggagta 38416650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 38416884 - 38416912
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  38416884 tggacatgtattttgaaacggagggagta 38416912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 59
Target Start/End: Complemental strand, 39295446 - 39295418
Alignment:
Q  31 tccgtttcataatacttgtccattttaga 59  Q
    |||||||||||||||||||||||||||||    
T  39295446 tccgtttcataatacttgtccattttaga 39295418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 44232105 - 44232077
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  44232105 tggacatgtattttgaaacggagggagta 44232077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 45292066 - 45292094
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  45292066 tggacatgtattttgaaacggagggagta 45292094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 47386520 - 47386548
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  47386520 tggacatgtattttgaaacggagggagta 47386548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 48652472 - 48652388
Alignment:
Q  53 ttttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataataccctt 137  Q
    |||| |||||||||||||||||||  | ||||  ||||| |||||| ||||| | |||||||||||  || | ||||||||||||    
T  48652472 ttttggagaataattttgtttcactttacttgttactttaaagttttaatgcgacattaattattgatttattaataataccctt 48652388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 30 - 301
Target Start/End: Complemental strand, 39938441 - 39938170
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||||||||    
T  39938441 ctccgttttataatacttgtccattttagagaataattttgtttcacaatacttgtcacttttaagttttaatgcaacattaattattgtcttgtcaata 39938342  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  39938341 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 39938242  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39938241 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggtcatgtattttgaaacggagggagta 39938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 30 - 300
Target Start/End: Complemental strand, 23367060 - 23366790
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||| ||||||||||||||||||||||    
T  23367060 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatacaacattaattattgtcttgtcaata 23366961  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         |||||||||||||||||||||||||||||||||||||| |||||||    
T  23366960 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaata 23366861  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23366860 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagt 23366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 3519024 - 3518908
Alignment:
Q  185 attaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3519024 attaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 3518925  T
Q  285 ttgaaacggagggagta 301  Q
    |||||||||||||||||    
T  3518924 ttgaaacggagggagta 3518908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 1102618 - 1102503
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1102618 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtattt 1102519  T
Q  286 tgaaacggagggagta 301  Q
    ||||||||||||||||    
T  1102518 tgaaacggagggagta 1102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 30 - 273
Target Start/End: Complemental strand, 1646558 - 1646317
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||| ||||| |||| |||||||||||    
T  1646558 ctccgtttcataatacctgtccattttagagaataattttgtttcacaatacttatcactttcaagtttcaatgcaacattaagtattatcttgtcaata 1646459  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||  ||||||||||||||||||||||||    
T  1646458 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaata 1646361  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaat 273  Q
    ||||||||||||| |||||||||||  |||||||||||||||||    
T  1646360 acaaaatttatttagtttcttggttgctgcaatttctccaaaat 1646317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 37673897 - 37674014
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  37673897 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaatgaacatgtat 37673996  T
Q  284 tttgaaacggagggagta 301  Q
    ||||||||||||||||||    
T  37673997 tttgaaacggagggagta 37674014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 22388144 - 22388271
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  22388144 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 22388243  T
Q  130 atacccttgcacatttattgtagagaga 157  Q
    ||||||||||| ||||||||||||||||    
T  22388244 atacccttgcatatttattgtagagaga 22388271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 3519178 - 3519050
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| || ||||||||||||||||||||||    
T  3519178 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgtaacattaattattgtcttgtcaata 3519079  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  3519078 atacccttgcatatttattgtagagagag 3519050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 186 - 301
Target Start/End: Original strand, 12969901 - 12970016
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12969901 ttaagggtattatagaaaatatacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 12970000  T
Q  286 tgaaacggagggagta 301  Q
    ||||||||||||||||    
T  12970001 tgaaacggagggagta 12970016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 1102772 - 1102645
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||| |||||||||||||| ||||||||||||||||||||||    
T  1102772 ctccgtttcataatacttgtccatttgagagaataattttgtttcacaatactcgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 1102673  T
Q  130 atacccttgcacatttattgtagagaga 157  Q
    | ||||||||| ||||||||||||||||    
T  1102672 acacccttgcatatttattgtagagaga 1102645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 37673750 - 37673876
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||  |||||||||||||| |||||||||||||||||||||||    
T  37673750 tccgtttcataatacttgtccattttagagaataactttgtttcaaaatacttgtcacttccaagtttcaatgcaacattaattattgtcttgtcaataa 37673849  T
Q  131 tacccttgcacatttattgtagagaga 157  Q
    |||||||||| ||||||||||||||||    
T  37673850 tacccttgcatatttattgtagagaga 37673876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 12969746 - 12969874
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| | || | |||| |||||||||||||||||||||||||||||| ||||||    
T  12969746 ctccgtttcataatacttgtccattttggagaataattttgtttcacaatacatgtctctttcaagtttcaatgcaatattaattattgtcttctcaata 12969845  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||  | |||||||||||||||||    
T  12969846 atacccttaaatatttattgtagagagag 12969874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 40756917 - 40757024
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |  ||| |||||| |||||||||||||| |||||||||||  || ||||||    
T  40756917 ctccgtttcataatacttgtccattttggagaataattttgtttcactttagttgtcactttcaagtttcaatgcaacattaattattggtttatcaata 40757016  T
Q  130 ataccctt 137  Q
    ||||||||    
T  40757017 ataccctt 40757024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 39561901 - 39562023
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||| ||||| ||||  |||| |||||||||||||||||||     ||| ||||||||| ||||||||||| |||||||||||  |||||||||    
T  39561901 ctccgtttcacaatacatgtcgtttttggagaataattttgtttcac-----ttgtcacttttaaatttcaatgcaacattaattattggtttgtcaata 39561995  T
Q  130 atacccttgcacatttattgtagagaga 157  Q
    |||||||| |  ||||||||||||||||    
T  39561996 atacccttacttatttattgtagagaga 39562023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 34224378 - 34224431
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34224378 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 34224431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 34242221 - 34242117
Alignment:
Q  54 tttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtaga 153  Q
    ||||||||||||||||||||||   | || | ||||||||||||| ||||||||||||| |||||  || ||||||||| |||| |  ||||||||||||    
T  34242221 tttagagaataattttgtttcattttactggtcacttttaagttttaatgcaatattaaatattggtttatcaataatatccttacctatttattgtaga 34242122  T
Q  154 gagag 158  Q
    |||||    
T  34242121 gagag 34242117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 35179097 - 35179164
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    |||||| |||||||||||| ||||||| | |||||||||||||||||||||||||||  |||||||||    
T  35179097 ttaaggttattatagaaaaaacacacaaaatttcatcaaaaataacaaaatttatttcatttcttggt 35179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 22388295 - 22388335
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22388295 gattaagggtattatagaaaacacacacatattttcatcaa 22388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 28110101 - 28110220
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||| |||| || ||  |||| ||||| ||  |||||||||| | |||| || ||| |||||||||||||| |||||||||||  || ||||||    
T  28110101 ctccgtttcacaatatttatcgtttttggagaaaaaacttgtttcacattacttgtcattttcaagtttcaatgcaacattaattattggtttatcaata 28110200  T
Q  130 atacccttgcacatttattg 149  Q
    |||||||| || ||||||||    
T  28110201 atacccttacatatttattg 28110220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 36447529 - 36447426
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||| ||||| ||||  ||||||||||||||||||||||||  |  | | |||||| || |||||||||||| ||||||||||  || ||||||    
T  36447529 ctccgtttcacaatacatgtcgcttttagagaataattttgtttcactttattcgtcactttcaaatttcaatgcaatgttaattattggtttatcaata 36447430  T
Q  130 atac 133  Q
    ||||    
T  36447429 atac 36447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 37284525 - 37284650
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||| ||||||| ||  |||| |||||||||||||||||||  | |||| || ||| |||||||||||||| ||| |||||||  || ||| ||    
T  37284525 ctccgtttcacaatactt-tctcttttggagaataattttgtttcactttacttgtcattttcaagtttcaatgcaacatt-attattgatttatcacta 37284622  T
Q  130 atacccttgcacatttattgtagagaga 157  Q
    |||| ||| |  ||||||||||||||||    
T  37284623 atactcttacctatttattgtagagaga 37284650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 14779888 - 14779838
Alignment:
Q  192 gtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 242  Q
    ||||||||||||| ||||| ||| ||||||||||||||| |||||||||||    
T  14779888 gtattatagaaaaaacacaaataatttcatcaaaaataaaaaaatttattt 14779838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 19976445 - 19976380
Alignment:
Q  187 taagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    |||||||||||||||||| | ||||||| ||| ||||||| || ||||||||||||| |||||||||    
T  19976445 taagggtattatagaaaaaa-acacataattttatcaaaagtaccaaaatttatttgatttcttggt 19976380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 32838964 - 32839022
Alignment:
Q  59 agaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattatt 117  Q
    |||||||||||||||||   | |||| |||||| |||||||||||||||||||||||||    
T  32838964 agaataattttgtttcattttacttgtcactttcaagtttcaatgcaatattaattatt 32839022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 12969778 - 12969737
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagtaata 304  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  12969778 ttctccaaaatggacaagtattatgaaacggagggagtaata 12969737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 1002922 - 1002997
Alignment:
Q  216 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaac 291  Q
    ||||||||||||||| |||||||||||| |||||| ||  ||| ||| ||  |||||  |||||||||||||||||    
T  1002922 tttcatcaaaaataataaaatttatttgatttcttagtatgtgtaatatcctcaaaagcgacatgtattttgaaac 1002997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 308
Target Start/End: Complemental strand, 11841621 - 11841586
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatattta 308  Q
    |||||||||||||||||||||||||||||| |||||    
T  11841621 tggacatgtattttgaaacggagggagtaacattta 11841586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 28401397 - 28401468
Alignment:
Q  86 cacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagaga 157  Q
    |||||| ||||||||| || | |||||||||||  |||||||||||||||||||  | |||||||| |||||    
T  28401397 cactttcaagtttcaaggccacattaattattgatttgtcaataatacccttgcctaattattgtaaagaga 28401468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Original strand, 5405230 - 5405264
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatattt 307  Q
    ||||||||||||||||||||||||||||| |||||    
T  5405230 tggacatgtattttgaaacggagggagtattattt 5405264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 32840367 - 32840401
Alignment:
Q  216 tttcatcaaaaataacaaaatttatttggtttctt 250  Q
    |||||||||||||||||||||||||||| ||||||    
T  32840367 tttcatcaaaaataacaaaatttatttgatttctt 32840401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 301
Target Start/End: Complemental strand, 40756949 - 40756911
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40756949 ttctccaaaatggacaagtattatgaaacggagggagta 40756911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 18078165 - 18078104
Alignment:
Q  192 gtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    |||||||||||||  |||| | |  ||||||||||||||||||||||||||| ||| |||||    
T  18078165 gtattatagaaaatccacaaaaaaattcatcaaaaataacaaaatttatttgattttttggt 18078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 19976568 - 19976471
Alignment:
Q  61 aataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagagag 158  Q
    |||||||||||||||   | |||| |||||| |||||||||||||| ||||||||||   || ||||||||| | ||    |||||||||||||||||    
T  19976568 aataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattagtttatcaataatatcattatctatttattgtagagagag 19976471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 44365391 - 44365420
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaa 302  Q
    ||||||||||||||||||||||||||||||    
T  44365391 tggacatgtattttgaaacggagggagtaa 44365420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 2183191 - 2183219
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  2183191 tggacatgtattttgaaacggagggagta 2183219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 7608283 - 7608311
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  7608283 tggacatgtattttgaaacggagggagta 7608311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 8042050 - 8042014
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatatttat 309  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  8042050 tggacatatattttgaaacggagggagtagtatttat 8042014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 8042256 - 8042284
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  8042256 tggacatgtattttgaaacggagggagta 8042284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 13125173 - 13125141
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatat 305  Q
    |||||||||||||||||||||| ||||||||||    
T  13125173 tggacatgtattttgaaacggatggagtaatat 13125141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 19141094 - 19141066
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  19141094 tggacatgtattttgaaacggagggagta 19141066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 19141300 - 19141328
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  19141300 tggacatgtattttgaaacggagggagta 19141328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 39358174 - 39358146
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  39358174 tggacatgtattttgaaacggagggagta 39358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 305
Target Start/End: Original strand, 39358401 - 39358433
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatat 305  Q
    |||||||||||||||||| ||||||||||||||    
T  39358401 tggacatgtattttgaaatggagggagtaatat 39358433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 301
Target Start/End: Original strand, 39562049 - 39562162
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||||||  ||||| ||| | ||| |||| ||||||||||||||||||||||| ||| ||| |  ||| ||||||   ||||  |||| ||||      
T  39562049 ttaagggtatta--gaaaaaacaaaaataatttcttcaaaaataacaaaatttatttgattttttgatatgtgtaatttccttaaaagcgacaagtatca 39562146  T
Q  286 tgaaacggagggagta 301  Q
    ||||||||||||||||    
T  39562147 tgaaacggagggagta 39562162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 166; Significance: 9e-89; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 30 - 302
Target Start/End: Complemental strand, 8626753 - 8626481
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||| ||||||||||||||||||||||    
T  8626753 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaata 8626654  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  8626653 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 8626554  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 302  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  8626553 acaaaatttatttggtttcttggttaatgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 8626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 30 - 301
Target Start/End: Complemental strand, 29260463 - 29260192
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||| |||||||||||||| |||||||| |||||||||||||    
T  29260463 ctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcattttcaagtttcaatgcaacattaattactgtcttgtcaata 29260364  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    |||||||| || |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  29260363 atacccttacatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 29260264  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29260263 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 29260192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 30 - 294
Target Start/End: Original strand, 30734489 - 30734753
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||| |||||||||||||||||||||| || ||||||||||||| |||||  ||| || ||| || ||||||||||| |||||||||| |||| ||||||    
T  30734489 ctccttttcataatacttgtccattttggaaaataattttgttttacaatagttgtcattttcaaatttcaatgcaacattaattattatcttatcaata 30734588  T
Q  130 atacccttgcacatttattgtagagagagnnnnnnnnnnnnnnnnnnnnnnnnngattaagggtattatagaaaacacacacatattttcatcaaaaata 229  Q
    ||||||||||| |||||||||||||||||                         ||||||||||||||||||||||||||||||||||||||||||||||    
T  30734589 atacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 30734688  T
Q  230 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacgga 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30734689 acaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacgga 30734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 1605696 - 1605579
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1605696 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 1605597  T
Q  284 tttgaaacggagggagta 301  Q
    ||||||||||||||||||    
T  1605596 tttgaaacggagggagta 1605579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 13757325 - 13757208
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13757325 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgtaatttctccaaaatggacatgtat 13757226  T
Q  284 tttgaaacggagggagta 301  Q
    |||||||||||| |||||    
T  13757225 tttgaaacggagagagta 13757208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 13757477 - 13757350
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| |||||||||||||||||||||||    
T  13757477 tccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataa 13757378  T
Q  131 tacccttgcacatttattgtagagagag 158  Q
    |||||||||| |||||||||||||||||    
T  13757377 tacccttgcatatttattgtagagagag 13757350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 7761416 - 7761301
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7761416 gattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttagtgcaatttctccaaaatggacatgtat 7761319  T
Q  284 tttgaaacggagggagta 301  Q
    ||||||||||||||||||    
T  7761318 tttgaaacggagggagta 7761301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 1605849 - 1605721
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| || ||||||| ||| ||||||||||||||||||||||    
T  1605849 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaata 1605750  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  1605749 atacccttgcatatttattgtagagagag 1605721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 7761571 - 7761443
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| ||||||||||||||||||||||||| | |||||||||    
T  7761571 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgcaatattaattattattttgtcaata 7761472  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  7761471 atacccttgcatatttattgtagagagag 7761443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 8235895 - 8235769
Alignment:
Q  31 tccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataa 130  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||| |||||||    
T  8235895 tccgtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaatattaattattgtcttatcaataa 8235796  T
Q  131 tacccttgcacatttattgtagagaga 157  Q
    ||||||| || ||||||||||||||||    
T  8235795 tacccttacatatttattgtagagaga 8235769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 4129697 - 4129570
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||||| ||||| ||||||||||||||||    
T  4129697 ctccgtttcataatacttgtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaa-tattgtcttgtcaata 4129599  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  4129598 atacccttgcatatttattgtagagagag 4129570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 15064701 - 15064829
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||| |||| |||||| |||||||||| ||| ||||||||||||||||||||||    
T  15064701 ctccgtttcataatacttgtccattttggagaataattttgtttcataatacttgtcactttcaagtttcaatacaacattaattattgtcttgtcaata 15064800  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  15064801 atacccttgcatatttattgtagagagag 15064829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 186 - 301
Target Start/End: Original strand, 15064856 - 15064971
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  15064856 ttaagggtagtataaaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttggttgctgcaatttctctaaaatggacatgtattt 15064955  T
Q  286 tgaaacggagggagta 301  Q
    ||||||||||||||||    
T  15064956 tgaaacggagggagta 15064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 31559744 - 31559872
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||  ||||| |||||||||||||| ||||||||||||||||| ||||    
T  31559744 ctccgtttcataatacttctccattttagagaataattttattttacaatacttgttactttcaagtttcaatgcaacattaattattgtcttgttaata 31559843  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  31559844 atacccttgcatatttattgtagagagag 31559872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 17942714 - 17942587
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | ||| |||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  17942714 ctccgtttcataatacttgtccattttggagaataattttgttttataatacttgtcactttcaagtttcaatgcaacattaattattgttttgtcaata 17942615  T
Q  130 atacccttgcacatttattgtagagaga 157  Q
    |||||||| || ||||||||||||||||    
T  17942614 atacccttacatatttattgtagagaga 17942587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 31559896 - 31559998
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  31559896 gattaagggtattacagaaaacatacacatattttcatcaaaaataacaaaatttatttgattttttggttaatgcaatttctccaaaatggacatgtat 31559995  T
Q  284 ttt 286  Q
    |||    
T  31559996 ttt 31559998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 295
Target Start/End: Original strand, 30734772 - 30734879
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||| || |||| |||||||||| ||||||||||||||||||    
T  30734772 ttaagggtattatagaaaacacaca--taatttcatcaaaaataacaaaatttatttgatttttttgttactgcaatttcttcaaaatggacatgtattt 30734869  T
Q  286 tgaaacggag 295  Q
    ||||||||||    
T  30734870 tgaaacggag 30734879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 8235741 - 8235624
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    ||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||| |||||||||||| |||||||||| ||||||| ||||||||    
T  8235741 gattaagggtattatagaaaacacacacataatatcataaaaaataacaaattttatttcgtttcttggttactgcaatttcttcaaaatgtacatgtat 8235642  T
Q  284 tttgaaacggagggagta 301  Q
    ||| |||  |||||||||    
T  8235641 tttaaaatagagggagta 8235624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 303
Target Start/End: Complemental strand, 4129542 - 4129433
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||| ||||||||||||||| |||| ||||||||    
T  4129542 ttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggttactgcaatttctccaaagtggatatgtattt 4129451  T
Q  286 tgaaacggagggagtaat 303  Q
    ||||||||||||||||||    
T  4129450 tgaaacggagggagtaat 4129433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 17942560 - 17942443
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatt--tatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||| ||||    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  17942560 ttaagggtattatagagaacacgcacataatttcatcaaaaataaaaaaaaaaatatttggtttcttggttactgcaatttctcaaaaatggacatgtat 17942461  T
Q  284 tttgaaacggagggagta 301  Q
    ||||||||| ||||||||    
T  17942460 tttgaaacgaagggagta 17942443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 19996715 - 19996768
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  19996715 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 19996768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 20398247 - 20398372
Alignment:
Q  33 cgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataata 132  Q
    ||||||| ||||| ||||  |||| || ||||||||||||||||  | ||||||||||| |||||| ||||||| ||||||||||   ||||||||||||    
T  20398247 cgtttcacaatacatgtcacttttggaaaataattttgtttcactttacttgccactttcaagttttaatgcaacattaattattaaattgtcaataata 20398346  T
Q  133 cccttgcacatttattgtagagagag 158  Q
    ||||| |  ||||||| || ||||||    
T  20398347 cccttacctatttattatacagagag 20398372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 21277595 - 21277659
Alignment:
Q  185 attaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 250  Q
    |||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| ||||||    
T  21277595 attaagggtattatagaaaa-acacataaattttcataaaaaataacaaaatttatttgatttctt 21277659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 19996363 - 19996322
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  19996363 aatttctctaaaatggacatgtattttgaaacggagggagta 19996322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 3798217 - 3798151
Alignment:
Q  187 taagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 253  Q
    ||||||| |||||||||| ||||| |||  ||||| ||||||||||||||||||||| ||| |||||    
T  3798217 taagggtgttatagaaaaaacacaaataacttcatgaaaaataacaaaatttatttgattttttggt 3798151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 4147959 - 4147923
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatatttat 309  Q
    ||||||||||||||||||||||||||||| |||||||    
T  4147959 tggacatgtattttgaaacggagggagtattatttat 4147923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 1814861 - 1814762
Alignment:
Q  33 cgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataata 132  Q
    ||||||| ||||| ||||  ||||  ||||||||||| ||||||  | |||| ||||||||| || |||||||| ||| |||||||  ||||||||||||    
T  1814861 cgtttcacaatacatgtcacttttgaagaataattttatttcactttacttgtcacttttaatttccaatgcaacattgattattggtttgtcaataata 1814762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 304
Target Start/End: Original strand, 25476042 - 25476073
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaata 304  Q
    ||||||||||||||||||||||||||||||||    
T  25476042 tggacatgtattttgaaacggagggagtaata 25476073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 14287102 - 14286989
Alignment:
Q  187 taagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatttt 286  Q
    |||||||||||||||||| |  |||| | |||||| ||||||||||||||||||||| ||| ||||   ||| |||||   |||||   ||| ||||| |    
T  14287102 taagggtattatagaaaaaag-cacagaatttcataaaaaataacaaaatttatttgatttattggcatgtgtaattttctcaaaaactacaagtattgt 14287004  T
Q  287 gaaacggagggagta 301  Q
    |||||||||||||||    
T  14287003 gaaacggagggagta 14286989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 301
Target Start/End: Complemental strand, 15064733 - 15064695
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  15064733 ttctccaaaatggacaagtattatgaaacggagggagta 15064695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 301
Target Start/End: Original strand, 17942682 - 17942720
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  17942682 ttctccaaaatggacaagtattatgaaacggagggagta 17942720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 301
Target Start/End: Complemental strand, 1814680 - 1814595
Alignment:
Q  216 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    ||||||||||||||||||| |||||||| ||||||| |  ||| |||||   |||||  |||| ||||| ||||||||| ||||||    
T  1814680 tttcatcaaaaataacaaagtttatttgatttcttgatatgtgtaattttctcaaaagcgacaagtattgtgaaacggatggagta 1814595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 22055006 - 22055035
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaa 302  Q
    ||||||||||||||||||||||||||||||    
T  22055006 tggacatgtattttgaaacggagggagtaa 22055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 32671844 - 32671811
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaatatt 306  Q
    ||||||||||||||||||||||||||||| ||||    
T  32671844 tggacatgtattttgaaacggagggagtattatt 32671811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 33845469 - 33845502
Alignment:
Q  210 acatattttcatcaaaaataacaaaatttatttg 243  Q
    ||||| ||||||||||||||||||||||||||||    
T  33845469 acataatttcatcaaaaataacaaaatttatttg 33845502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 11370679 - 11370711
Alignment:
Q  218 tcatcaaaaataacaaaatttatttggtttctt 250  Q
    |||||||||||||||||||||||||| ||||||    
T  11370679 tcatcaaaaataacaaaatttatttgatttctt 11370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 18668716 - 18668688
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  18668716 tggacatgtattttgaaacggagggagta 18668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 18668922 - 18668950
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  18668922 tggacatgtattttgaaacggagggagta 18668950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 19087986 - 19087958
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  19087986 tggacatgtattttgaaacggagggagta 19087958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 19088192 - 19088220
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  19088192 tggacatgtattttgaaacggagggagta 19088220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 20437045 - 20437017
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  20437045 tggacatgtattttgaaacggagggagta 20437017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 24623969 - 24623941
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  24623969 tggacatgtattttgaaacggagggagta 24623941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 26861031 - 26860931
Alignment:
Q  34 gtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatac 133  Q
    |||||| ||||| ||||  |||| |||||||| ||||||||||  | |||| || ||| | |||||||| ||| ||| |||||||  |||||||||||||    
T  26861031 gtttcacaatacatgtcatttttggagaataagtttgtttcactttacttgtcattttcatgtttcaatacaacattgattattgatttgtcaataatac 26860932  T
Q  134 c 134  Q
    |    
T  26860931 c 26860931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 32414913 - 32414941
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  32414913 tggacatgtattttgaaacggagggagta 32414941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 32420754 - 32420782
Alignment:
Q  273 tggacatgtattttgaaacggagggagta 301  Q
    |||||||||||||||||||||||||||||    
T  32420754 tggacatgtattttgaaacggagggagta 32420782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 114; Significance: 9e-58; HSPs: 2)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 59 - 176
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  59 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 158  T
Q  284 tttgaaacggagggagta 301  Q
    |||||||||||| |||||    
T  159 tttgaaacggagagagta 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 1 - 33
Alignment:
Q  126 aataatacccttgcacatttattgtagagagag 158  Q
    ||||||||||||||| |||||||||||||||||    
T  1 aataatacccttgcatatttattgtagagagag 33  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 45569 - 45454
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  45569 ttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttggtgcaatttctccaaaatgaacatgtattt 45470  T
Q  286 tgaaacggagggagta 301  Q
    ||||||||||||||||    
T  45469 tgaaacggagggagta 45454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 45724 - 45596
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | || | |||| || |||||||||||||||||||||||| || ||||||    
T  45724 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacatgtctctttcaaatttcaatgcaatattaattattgtattatcaata 45625  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||| ||||  | |||||||||||| ||||    
T  45624 ataaccttaaatatttattgtagaaagag 45596  T

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Target: scaffold0054; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 45692 - 45733
Alignment:
Q  263 ttctccaaaatggacatgtattttgaaacggagggagtaata 304  Q
    ||||| |||||||||| ||||| |||||||||||||||||||    
T  45692 ttctctaaaatggacaagtattatgaaacggagggagtaata 45733  T

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Target: scaffold1770 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 432 - 305
Alignment:
Q  30 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaata 129  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||||| ||||| ||||||||||||||||    
T  432 ctccgtttcataatacttgtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaa-tattgtcttgtcaata 334  T
Q  130 atacccttgcacatttattgtagagagag 158  Q
    ||||||||||| |||||||||||||||||    
T  333 atacccttgcatatttattgtagagagag 305  T

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Target: scaffold1770; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 303
Target Start/End: Complemental strand, 277 - 168
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 285  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||| ||||||||||||||| |||| ||||||||    
T  277 ttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggttactgcaatttctccaaagtggatatgtattt 186  T
Q  286 tgaaacggagggagtaat 303  Q
    ||||||||||||||||||    
T  185 tgaaacggagggagtaat 168  T

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Target: scaffold0062 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 44 - 158
Target Start/End: Original strand, 287 - 401
Alignment:
Q  44 acttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacat 143  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||||||| ||||||||||||||||||||||||| | || || ||    
T  287 acttgtccattttagagaataattttgtttcacaatacttgtcacttttaaattttaatgcaacattaattattgtcttgtcaataatatcattacatat 386  T
Q  144 ttattgtagagagag 158  Q
    |||||||||||||||    
T  387 ttattgtagagagag 401  T

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Target: scaffold0062; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 425 - 525
Alignment:
Q  184 gattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtat 283  Q
    |||||||||||||||| ||||||||||  || ||| |||||||||||||||||||||||| ||| ||| ||| ||||||||| |||||||| ||||||||    
T  425 gattaagggtattataaaaaacacaca--taattttatcaaaaataacaaaatttatttgattttttgattactgcaatttcgccaaaatgaacatgtat 522  T
Q  284 ttt 286  Q
    |||    
T  523 ttt 525  T

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Target: scaffold0025 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 65199 - 65278
Alignment:
Q  58 gagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataataccctt 137  Q
    |||||||||||||||||| | | |||| ||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  65199 gagaataattttgtttcatattacttgtcacttttaaatttcaatgcaatattaattattggtttgtcaataataccctt 65278  T

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Target: scaffold0257 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 23520 - 23467
Alignment:
Q  248 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23520 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 23467  T

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Target: scaffold0257; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 23872 - 23916
Alignment:
Q  260 aatttctccaaaatggacatgtattttgaaacggagggagtaata 304  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  23872 aatttctctaaaatggacatgtattttgaaacggatggagtaata 23916  T

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Target: scaffold0343 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 6906 - 7033
Alignment:
Q  29 actccgtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaat 128  Q
    |||| |||||| ||||||||||  |||| |||||||||||||||||| | |  ||| | | ||||||||||||||||| ||||||||||| | |||||||    
T  6906 actctgtttcacaatacttgtcgtttttggagaataattttgtttcatattatttgtc-cgtttaagtttcaatgcaacattaattattgacgtgtcaat 7004  T
Q  129 aatacccttgcacatttattgtagagaga 157  Q
    ||||| ||| |  ||||||||||||||||    
T  7005 aatactcttacttatttattgtagagaga 7033  T

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Target: scaffold0056 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 158
Target Start/End: Complemental strand, 71350 - 71226
Alignment:
Q  34 gtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatac 133  Q
    |||||| ||||||||||  ||||  ||||||||||| ||||||| | |||| ||||||||||||| ||||||| |||||||||||  |||| ||| ||||    
T  71350 gtttcacaatacttgtcgtttttgaagaataattttatttcacattacttgtcacttttaagtttgaatgcaaaattaattattggtttgttaattatac 71251  T
Q  134 ccttgcacatttattgtagagagag 158  Q
    |||| |  |||||||||||| ||||    
T  71250 ccttacctatttattgtagatagag 71226  T

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Target: scaffold0056; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 70939 - 70874
Alignment:
Q  186 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 251  Q
    |||||||| ||| |||||| ||||||| | |||||||||||||||||||||||||||| |||||||    
T  70939 ttaagggtgttacagaaaaaacacacagaatttcatcaaaaataacaaaatttatttgatttcttg 70874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 158
Target Start/End: Complemental strand, 7935 - 7811
Alignment:
Q  34 gtttcataatacttgtccattttagagaataattttgtttcacaatgcttgccacttttaagtttcaatgcaatattaattattgtcttgtcaataatac 133  Q
    |||||| ||||||||||  ||||| |||||||||||  |||||| | |||| |||||| |||||| ||||||| ||||||||| |  |||||||||||||    
T  7935 gtttcacaatacttgtcgtttttaaagaataattttaattcacattacttgtcactttcaagttttaatgcaacattaattatcggtttgtcaataatac 7836  T
Q  134 ccttgcacatttattgtagagagag 158  Q
     ||| |  |||||||||| ||||||    
T  7835 tcttacctatttattgtaaagagag 7811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 15386 - 15456
Alignment:
Q  87 acttttaagtttcaatgcaatattaattattgtcttgtcaataatacccttgcacatttattgtagagaga 157  Q
    |||||||||||||||||||| ||||||||| |  ||||||||||||| ||| |   |||||||||||||||    
T  15386 acttttaagtttcaatgcaacattaattatcggtttgtcaataatacgcttacttttttattgtagagaga 15456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 303
Target Start/End: Complemental strand, 100675 - 100645
Alignment:
Q  273 tggacatgtattttgaaacggagggagtaat 303  Q
    |||||||||||||||||||||||||||||||    
T  100675 tggacatgtattttgaaacggagggagtaat 100645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 307
Target Start/End: Complemental strand, 67796 - 67764
Alignment:
Q  275 gacatgtattttgaaacggagggagtaatattt 307  Q
    |||||||||||||||||||| ||||||||||||    
T  67796 gacatgtattttgaaacggatggagtaatattt 67764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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