View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0786_low_39 (Length: 246)
Name: NF0786_low_39
Description: NF0786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0786_low_39 |
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Alignment Details
Target: chr8 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 46 - 210
Target Start/End: Complemental strand, 521473 - 521309
Alignment:
| Q |
46 |
catcacaaacacaagccccttatcaaaacccaatcccaaacaagtccttcacaacaaagcaaatcttgtcacttcactttacatagcacataatattgct |
145 |
Q |
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| T |
521473 |
catcacaaacacaagctccttatcaaaacccaatcccaaacaagtccttcacaacaaagcaaatcctgtcacttcactttacatagcacataatattgct |
521374 |
T |
|
| Q |
146 |
gtctagttatcacaactaaaagggagtgcaaataacaatttcgctaactacaaaaccaattcaca |
210 |
Q |
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|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
521373 |
gtttagttatcacaactaaaagggagtgcaaataacaacttcgctaactacaaaaccaattcaca |
521309 |
T |
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