View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0787_low_36 (Length: 214)
Name: NF0787_low_36
Description: NF0787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0787_low_36 |
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Alignment Details
Target: chr6 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7934623 - 7934497
Alignment:
| Q |
1 |
tctatggcacatattgtaacaatggaatgaaagaataacgaacaaaatattatgtatttttcatgagaaatattacataatacacaggaaaaaatggaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7934623 |
tctatggcacatattgtaacaatggaatgaaagaataatgaacaaaatattatgtatttttcatgagaaatattacataatacacaggaaaaaatggaac |
7934524 |
T |
|
| Q |
101 |
aggggttaccaaatgtggtgctgatga |
127 |
Q |
| |
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| T |
7934523 |
aggggttaccaaatgtggtgctgatga |
7934497 |
T |
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