View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0789_low_22 (Length: 233)
Name: NF0789_low_22
Description: NF0789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0789_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 4224286 - 4224436
Alignment:
| Q |
1 |
aatatctgattatggacttagttttttggggggtgtagaaaagagagggttagttggttatgtggatgatgaatattggaatgaaggaattaggggtggt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4224286 |
aatatctgattatggacttagttttttggggggtgtagaaaagagagggttagttggttatgtggatgatgaatattggaatgaaggaattaggggtggt |
4224385 |
T |
|
| Q |
101 |
agagtttgtaaggaaaatgatgtttatgggttaggggtgatattgttggag |
151 |
Q |
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|| |||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
4224386 |
agtgtttgtaaggaaaatgatgtttatgggttaggggtgattttgttggag |
4224436 |
T |
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