View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0789_low_26 (Length: 215)
Name: NF0789_low_26
Description: NF0789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0789_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 4224436 - 4224250
Alignment:
| Q |
9 |
ctccaacaatatcacccctaacccataaacatcattttccttacaaactctaccacccctaattccttcattccaatattcatcatccacataaccaact |
108 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4224436 |
ctccaacaaaatcacccctaacccataaacatcattttccttacaaacactaccacccctaattccttcattccaatattcatcatccacataaccaact |
4224337 |
T |
|
| Q |
109 |
aaccctctcttttctacaccccccaaaaaactaagtccataatcagatattttagcacaaaaattaacatcaataagaacattagaa |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4224336 |
aaccctctcttttctacaccccccaaaaaactaagtccataatcagatattttagcacaaaaattaacatcaataagaacattagaa |
4224250 |
T |
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