View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0789_low_5 (Length: 433)

Name: NF0789_low_5
Description: NF0789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0789_low_5
NF0789_low_5
[»] chr3 (53 HSPs)
chr3 (30-424)||(9017601-9017995)
chr3 (253-423)||(39866467-39866639)
chr3 (260-361)||(54122200-54122303)
chr3 (260-359)||(43639494-43639595)
chr3 (227-404)||(32827237-32827416)
chr3 (227-361)||(32023076-32023213)
chr3 (253-343)||(48744280-48744370)
chr3 (253-361)||(26134679-26134789)
chr3 (253-344)||(26832092-26832183)
chr3 (227-350)||(54493903-54494026)
chr3 (241-404)||(2868583-2868748)
chr3 (241-406)||(17776925-17777092)
chr3 (241-406)||(19078226-19078393)
chr3 (253-361)||(10855015-10855125)
chr3 (253-361)||(11251103-11251213)
chr3 (230-405)||(41031570-41031750)
chr3 (253-361)||(54845492-54845602)
chr3 (242-360)||(36097632-36097752)
chr3 (253-349)||(5245433-5245529)
chr3 (241-349)||(14756104-14756212)
chr3 (271-404)||(33994696-33994831)
chr3 (257-413)||(54782988-54783146)
chr3 (230-361)||(53876412-53876545)
chr3 (241-350)||(54458298-54458407)
chr3 (241-341)||(45392099-45392199)
chr3 (253-350)||(15082023-15082120)
chr3 (260-361)||(21296479-21296582)
chr3 (241-328)||(11529122-11529209)
chr3 (253-349)||(46785969-46786067)
chr3 (241-349)||(1772096-1772205)
chr3 (265-349)||(55415429-55415513)
chr3 (272-361)||(8706190-8706277)
chr3 (272-361)||(9058077-9058164)
chr3 (301-413)||(17274750-17274864)
chr3 (265-323)||(22202405-22202463)
chr3 (272-361)||(53583537-53583627)
chr3 (253-361)||(15280626-15280735)
chr3 (253-315)||(12744835-12744897)
chr3 (253-306)||(37041906-37041959)
chr3 (265-345)||(52325210-52325290)
chr3 (228-360)||(1334758-1334892)
chr3 (242-300)||(49003280-49003338)
chr3 (231-293)||(50150413-50150475)
chr3 (169-210)||(8706089-8706130)
chr3 (169-210)||(9057976-9058017)
chr3 (283-320)||(26142950-26142987)
chr3 (231-361)||(39329727-39329858)
chr3 (169-213)||(2868515-2868559)
chr3 (34-70)||(8754306-8754342)
chr3 (253-349)||(9218166-9218261)
chr3 (169-213)||(32023223-32023267)
chr3 (169-213)||(43640687-43640731)
chr3 (304-361)||(49006269-49006328)
[»] chr5 (58 HSPs)
chr5 (227-404)||(11099411-11099590)
chr5 (172-420)||(25814308-25814554)
chr5 (169-413)||(3725128-3725369)
chr5 (228-347)||(7613703-7613822)
chr5 (228-346)||(8692812-8692930)
chr5 (227-361)||(42575615-42575751)
chr5 (169-413)||(6610776-6611020)
chr5 (241-361)||(39183604-39183726)
chr5 (227-404)||(20189887-20190065)
chr5 (260-349)||(8369687-8369776)
chr5 (227-361)||(33988195-33988331)
chr5 (253-359)||(35334505-35334613)
chr5 (241-349)||(32539671-32539779)
chr5 (260-350)||(22582862-22582951)
chr5 (231-353)||(25108572-25108694)
chr5 (231-353)||(25167664-25167786)
chr5 (260-359)||(35646068-35646169)
chr5 (230-361)||(17935221-17935353)
chr5 (241-320)||(6735377-6735456)
chr5 (253-361)||(16283564-16283674)
chr5 (302-361)||(17741148-17741207)
chr5 (260-361)||(39008156-39008263)
chr5 (302-406)||(41184730-41184836)
chr5 (231-353)||(25111135-25111257)
chr5 (231-353)||(25170226-25170348)
chr5 (253-361)||(6629373-6629480)
chr5 (227-361)||(17242931-17243067)
chr5 (253-349)||(24231031-24231127)
chr5 (241-353)||(35666894-35667006)
chr5 (231-387)||(36469045-36469203)
chr5 (253-360)||(33012375-33012484)
chr5 (230-335)||(14259665-14259770)
chr5 (228-346)||(42211329-42211443)
chr5 (231-323)||(35585633-35585725)
chr5 (253-332)||(36446695-36446774)
chr5 (228-387)||(858331-858492)
chr5 (227-361)||(13135748-13135874)
chr5 (241-345)||(15254774-15254878)
chr5 (241-361)||(36006872-36006991)
chr5 (170-361)||(4412325-4412512)
chr5 (253-350)||(6172970-6173067)
chr5 (241-349)||(5357808-5357916)
chr5 (253-361)||(7311159-7311267)
chr5 (253-349)||(39060413-39060509)
chr5 (260-360)||(16926069-16926171)
chr5 (231-349)||(35988633-35988750)
chr5 (169-213)||(7276324-7276368)
chr5 (169-213)||(35585740-35585784)
chr5 (253-350)||(30437729-30437826)
chr5 (169-213)||(4044599-4044643)
chr5 (169-213)||(9426676-9426720)
chr5 (173-213)||(13422474-13422514)
chr5 (169-213)||(13597970-13598014)
chr5 (241-293)||(15564935-15564987)
chr5 (241-349)||(15898200-15898308)
chr5 (169-213)||(22582994-22583038)
chr5 (304-361)||(28057807-28057866)
chr5 (169-213)||(39008070-39008114)
[»] chr1 (71 HSPs)
chr1 (227-404)||(36467129-36467308)
chr1 (230-404)||(50267372-50267548)
chr1 (173-413)||(52830339-52830576)
chr1 (228-404)||(49494097-49494275)
chr1 (253-413)||(32587786-32587950)
chr1 (241-413)||(43895856-43896029)
chr1 (227-387)||(5040526-5040688)
chr1 (227-361)||(28839334-28839470)
chr1 (227-406)||(19532852-19533032)
chr1 (227-361)||(26755971-26756107)
chr1 (241-349)||(17724705-17724813)
chr1 (241-361)||(5442349-5442471)
chr1 (253-343)||(8773263-8773353)
chr1 (265-350)||(7785262-7785349)
chr1 (253-353)||(27831867-27831967)
chr1 (253-404)||(28276969-28277125)
chr1 (261-349)||(30749960-30750048)
chr1 (261-349)||(30771411-30771499)
chr1 (253-361)||(32348239-32348349)
chr1 (227-361)||(8327712-8327848)
chr1 (227-361)||(51749160-51749296)
chr1 (265-349)||(17342861-17342945)
chr1 (260-361)||(52432340-52432443)
chr1 (228-359)||(46496014-46496145)
chr1 (241-335)||(36784323-36784417)
chr1 (266-361)||(42926168-42926265)
chr1 (253-347)||(46536361-46536455)
chr1 (230-361)||(48242567-48242700)
chr1 (231-361)||(13500704-13500838)
chr1 (264-344)||(3555551-3555631)
chr1 (281-420)||(10370102-10370244)
chr1 (278-387)||(49944978-49945089)
chr1 (303-403)||(37525111-37525211)
chr1 (266-361)||(45889224-45889322)
chr1 (241-349)||(21304393-21304501)
chr1 (252-345)||(51848687-51848782)
chr1 (241-343)||(34877087-34877189)
chr1 (280-349)||(7787710-7787779)
chr1 (244-349)||(16040089-16040194)
chr1 (254-361)||(3718827-3718935)
chr1 (265-349)||(34813950-34814034)
chr1 (241-349)||(40019768-40019876)
chr1 (231-350)||(45305852-45305970)
chr1 (241-307)||(948620-948686)
chr1 (231-349)||(11425860-11425978)
chr1 (253-360)||(29225386-29225495)
chr1 (231-293)||(41968170-41968232)
chr1 (253-361)||(2571384-2571492)
chr1 (273-403)||(6787288-6787420)
chr1 (244-349)||(27391359-27391464)
chr1 (289-423)||(27698861-27698997)
chr1 (304-422)||(28706539-28706659)
chr1 (231-361)||(46273159-46273291)
chr1 (241-348)||(4659440-4659547)
chr1 (174-213)||(17342774-17342813)
chr1 (241-340)||(30903228-30903326)
chr1 (265-361)||(46880448-46880546)
chr1 (241-319)||(914756-914834)
chr1 (304-361)||(21304784-21304842)
chr1 (302-361)||(26040739-26040800)
chr1 (295-349)||(28908150-28908204)
chr1 (172-213)||(34877212-34877253)
chr1 (241-346)||(48391756-48391861)
chr1 (241-318)||(52382408-52382485)
chr1 (253-349)||(4466145-4466241)
chr1 (169-213)||(11425992-11426036)
chr1 (241-349)||(26583737-26583845)
chr1 (169-213)||(27698753-27698797)
chr1 (253-349)||(37541104-37541200)
chr1 (253-349)||(38664422-38664518)
chr1 (281-349)||(47479955-47480023)
[»] chr8 (55 HSPs)
chr8 (227-402)||(5962408-5962585)
chr8 (242-406)||(12653697-12653863)
chr8 (174-404)||(5391994-5392223)
chr8 (253-423)||(38252351-38252524)
chr8 (227-361)||(28802762-28802898)
chr8 (241-361)||(45425494-45425616)
chr8 (241-359)||(39171552-39171672)
chr8 (170-361)||(32241400-32241589)
chr8 (227-361)||(44790398-44790534)
chr8 (241-404)||(2349359-2349525)
chr8 (274-350)||(9014745-9014821)
chr8 (228-405)||(32967209-32967388)
chr8 (230-349)||(34133125-34133244)
chr8 (253-387)||(42412333-42412469)
chr8 (227-336)||(44615368-44615477)
chr8 (253-360)||(21587298-21587403)
chr8 (227-404)||(29615793-29615972)
chr8 (260-361)||(33190885-33190988)
chr8 (241-361)||(4274275-4274397)
chr8 (266-405)||(31410540-31410681)
chr8 (253-359)||(45197632-45197739)
chr8 (252-359)||(29730874-29730985)
chr8 (253-361)||(42558559-42558667)
chr8 (241-347)||(7042761-7042868)
chr8 (252-404)||(22324888-22325042)
chr8 (272-349)||(13084938-13085015)
chr8 (253-361)||(138677-138785)
chr8 (253-349)||(2195489-2195584)
chr8 (244-349)||(3384546-3384651)
chr8 (264-361)||(41726553-41726650)
chr8 (273-386)||(139063-139178)
chr8 (253-361)||(9734145-9734253)
chr8 (260-347)||(31132758-31132845)
chr8 (253-347)||(7258359-7258453)
chr8 (280-350)||(26570141-26570211)
chr8 (231-336)||(8618127-8618232)
chr8 (275-323)||(886652-886700)
chr8 (231-319)||(1230383-1230470)
chr8 (280-361)||(4480446-4480528)
chr8 (228-351)||(2119712-2119835)
chr8 (257-361)||(10728897-10729004)
chr8 (231-346)||(27868318-27868433)
chr8 (170-213)||(33826177-33826220)
chr8 (260-323)||(37219780-37219843)
chr8 (271-345)||(12957975-12958049)
chr8 (264-346)||(27973679-27973761)
chr8 (264-346)||(28030948-28031030)
chr8 (264-349)||(28791340-28791425)
chr8 (332-361)||(29451448-29451477)
chr8 (119-152)||(44790605-44790638)
chr8 (253-349)||(15559120-15559216)
chr8 (173-213)||(26570281-26570321)
chr8 (173-213)||(29730990-29731030)
chr8 (169-213)||(33191031-33191075)
chr8 (228-292)||(34287126-34287190)
[»] chr7 (55 HSPs)
chr7 (227-405)||(29434513-29434692)
chr7 (232-361)||(27234503-27234633)
chr7 (253-406)||(5724639-5724793)
chr7 (241-350)||(17266036-17266145)
chr7 (227-361)||(37490594-37490730)
chr7 (241-402)||(30463025-30463188)
chr7 (253-361)||(2846652-2846762)
chr7 (230-361)||(2842028-2842161)
chr7 (228-403)||(49100437-49100613)
chr7 (241-359)||(18235199-18235319)
chr7 (227-361)||(33584558-33584694)
chr7 (230-361)||(28923207-28923338)
chr7 (253-404)||(11616582-11616735)
chr7 (253-392)||(47454025-47454166)
chr7 (260-361)||(7425853-7425957)
chr7 (269-359)||(23058856-23058947)
chr7 (227-361)||(29257542-29257678)
chr7 (227-347)||(36117656-36117777)
chr7 (170-349)||(31581433-31581608)
chr7 (228-404)||(48981652-48981830)
chr7 (260-349)||(1643328-1643417)
chr7 (228-349)||(33774034-33774154)
chr7 (265-349)||(23703949-23704033)
chr7 (227-403)||(34963742-34963923)
chr7 (253-343)||(21387476-21387566)
chr7 (260-359)||(38181852-38181953)
chr7 (247-325)||(7456598-7456676)
chr7 (265-343)||(46095416-46095494)
chr7 (253-349)||(32776004-32776100)
chr7 (265-358)||(34001843-34001933)
chr7 (241-361)||(34064224-34064345)
chr7 (253-361)||(44604454-44604563)
chr7 (253-359)||(37264334-37264440)
chr7 (228-361)||(40038085-40038222)
chr7 (241-358)||(28333180-28333298)
chr7 (241-361)||(39343649-39343769)
chr7 (227-317)||(46288453-46288543)
chr7 (231-361)||(2849254-2849386)
chr7 (253-318)||(16870788-16870853)
chr7 (264-349)||(45218148-45218233)
chr7 (299-343)||(5083468-5083512)
chr7 (253-293)||(25778765-25778805)
chr7 (169-213)||(37157112-37157156)
chr7 (241-320)||(37157179-37157259)
chr7 (244-345)||(43780096-43780203)
chr7 (271-351)||(40590817-40590893)
chr7 (231-349)||(39498673-39498790)
chr7 (311-349)||(45890848-45890886)
chr7 (303-361)||(22618010-22618070)
chr7 (231-361)||(27337847-27337981)
chr7 (271-303)||(5083518-5083550)
chr7 (265-345)||(19687992-19688072)
chr7 (173-213)||(28923349-28923389)
chr7 (173-213)||(37491028-37491068)
chr7 (169-213)||(48981320-48981364)
[»] chr4 (73 HSPs)
chr4 (173-404)||(39979725-39979954)
chr4 (227-361)||(18849735-18849871)
chr4 (227-361)||(42024177-42024313)
chr4 (227-343)||(3686006-3686122)
chr4 (255-350)||(33047515-33047610)
chr4 (227-406)||(38976986-38977168)
chr4 (174-361)||(54729460-54729644)
chr4 (265-406)||(4360339-4360482)
chr4 (253-349)||(27977168-27977264)
chr4 (262-349)||(9093752-9093839)
chr4 (229-361)||(14009610-14009744)
chr4 (253-360)||(283454-283563)
chr4 (253-404)||(32559184-32559337)
chr4 (270-404)||(35909506-35909642)
chr4 (227-361)||(41710120-41710256)
chr4 (241-350)||(22872375-22872486)
chr4 (228-361)||(49306583-49306718)
chr4 (253-359)||(17237064-17237172)
chr4 (228-349)||(37309694-37309815)
chr4 (241-349)||(38160142-38160250)
chr4 (253-360)||(39976371-39976476)
chr4 (227-404)||(49812224-49812403)
chr4 (264-404)||(8295061-8295203)
chr4 (257-361)||(41203762-41203868)
chr4 (241-413)||(1825170-1825346)
chr4 (253-403)||(47787781-47787933)
chr4 (281-349)||(41436530-41436598)
chr4 (227-349)||(45290033-45290153)
chr4 (241-347)||(30568668-30568778)
chr4 (228-349)||(42544205-42544326)
chr4 (265-352)||(50328057-50328145)
chr4 (257-361)||(51572206-51572310)
chr4 (241-361)||(16493274-16493394)
chr4 (253-361)||(28974327-28974437)
chr4 (253-361)||(42185772-42185882)
chr4 (265-351)||(26799204-26799290)
chr4 (253-347)||(52677023-52677117)
chr4 (241-359)||(4357577-4357696)
chr4 (271-343)||(8065572-8065644)
chr4 (241-349)||(18509850-18509958)
chr4 (270-346)||(31862827-31862903)
chr4 (254-387)||(34021059-34021194)
chr4 (275-347)||(40881184-40881256)
chr4 (265-349)||(49448874-49448958)
chr4 (273-343)||(21240934-21241004)
chr4 (260-349)||(25149479-25149569)
chr4 (274-361)||(26185224-26185313)
chr4 (253-315)||(51527439-51527501)
chr4 (299-413)||(42670307-42670423)
chr4 (227-361)||(39258246-39258384)
chr4 (260-307)||(43421328-43421375)
chr4 (241-315)||(42132822-42132896)
chr4 (231-344)||(27790415-27790528)
chr4 (231-324)||(37786960-37787053)
chr4 (231-361)||(42051632-42051764)
chr4 (265-387)||(43334973-43335097)
chr4 (172-213)||(43335145-43335186)
chr4 (227-316)||(48740515-48740604)
chr4 (241-297)||(11583913-11583969)
chr4 (241-293)||(35027543-35027595)
chr4 (312-361)||(42367869-42367920)
chr4 (169-213)||(51572349-51572393)
chr4 (255-349)||(40020938-40021032)
chr4 (308-349)||(29550717-29550758)
chr4 (253-334)||(47846920-47847000)
chr4 (169-213)||(1825370-1825414)
chr4 (169-213)||(3685952-3685996)
chr4 (252-361)||(25902438-25902549)
chr4 (174-214)||(28974253-28974293)
chr4 (169-213)||(33047439-33047483)
chr4 (174-210)||(45289983-45290019)
chr4 (169-213)||(49812170-49812214)
chr4 (265-341)||(50714615-50714691)
[»] chr2 (61 HSPs)
chr2 (253-403)||(23684980-23685132)
chr2 (227-349)||(28925838-28925960)
chr2 (265-406)||(41436112-41436254)
chr2 (169-361)||(5211934-5212124)
chr2 (260-359)||(3100428-3100529)
chr2 (271-361)||(2882024-2882116)
chr2 (227-343)||(37247880-37247996)
chr2 (241-406)||(43077657-43077824)
chr2 (228-406)||(13375119-13375301)
chr2 (253-361)||(28301455-28301565)
chr2 (260-361)||(28572236-28572338)
chr2 (265-404)||(435009-435152)
chr2 (253-423)||(30757483-30757654)
chr2 (173-361)||(7649952-7650137)
chr2 (253-361)||(24775784-24775894)
chr2 (227-359)||(28108353-28108487)
chr2 (231-349)||(11726712-11726830)
chr2 (227-359)||(15859323-15859454)
chr2 (264-349)||(18181203-18181288)
chr2 (228-359)||(8031737-8031868)
chr2 (228-406)||(3123639-3123822)
chr2 (257-349)||(43950438-43950530)
chr2 (308-404)||(40965090-40965188)
chr2 (227-349)||(10818616-10818738)
chr2 (241-350)||(2756683-2756792)
chr2 (254-349)||(20027139-20027235)
chr2 (231-318)||(39095630-39095717)
chr2 (261-361)||(44534459-44534561)
chr2 (280-345)||(565137-565202)
chr2 (241-387)||(28526973-28527121)
chr2 (271-361)||(31545994-31546086)
chr2 (266-347)||(36396450-36396531)
chr2 (253-349)||(4794594-4794690)
chr2 (253-349)||(8550632-8550728)
chr2 (253-349)||(36103291-36103387)
chr2 (231-350)||(26273758-26273877)
chr2 (273-361)||(33602202-33602292)
chr2 (241-359)||(1908472-1908592)
chr2 (241-331)||(3487403-3487493)
chr2 (227-293)||(7648912-7648978)
chr2 (231-349)||(31592549-31592666)
chr2 (253-359)||(10069563-10069671)
chr2 (253-361)||(43427063-43427172)
chr2 (283-351)||(5711048-5711116)
chr2 (241-293)||(13222077-13222129)
chr2 (253-349)||(19515902-19515996)
chr2 (173-213)||(44194597-44194637)
chr2 (265-361)||(7213508-7213606)
chr2 (174-213)||(42881399-42881438)
chr2 (231-361)||(43182273-43182403)
chr2 (172-213)||(8385020-8385061)
chr2 (264-386)||(9724910-9725034)
chr2 (264-349)||(24356143-24356228)
chr2 (172-213)||(33602354-33602395)
chr2 (271-361)||(33755296-33755388)
chr2 (299-361)||(36155580-36155644)
chr2 (260-361)||(314455-314558)
chr2 (169-213)||(18181336-18181380)
chr2 (173-213)||(28526909-28526949)
chr2 (169-213)||(28572152-28572196)
chr2 (241-345)||(39547802-39547905)
[»] chr6 (25 HSPs)
chr6 (228-361)||(31265775-31265910)
chr6 (169-361)||(30063925-30064115)
chr6 (169-349)||(3604590-3604766)
chr6 (260-361)||(4238449-4238550)
chr6 (227-413)||(7301006-7301192)
chr6 (169-404)||(15081364-15081597)
chr6 (241-345)||(14306235-14306339)
chr6 (228-422)||(9755062-9755258)
chr6 (241-345)||(14312642-14312746)
chr6 (232-350)||(2657901-2658019)
chr6 (265-404)||(33109406-33109547)
chr6 (241-325)||(7167758-7167842)
chr6 (281-361)||(7739494-7739576)
chr6 (266-349)||(34915803-34915886)
chr6 (231-359)||(31723493-31723621)
chr6 (231-293)||(26356268-26356330)
chr6 (253-346)||(117100-117193)
chr6 (241-293)||(16126220-16126272)
chr6 (299-361)||(4611336-4611399)
chr6 (241-291)||(8569787-8569837)
chr6 (274-345)||(8569634-8569702)
chr6 (264-349)||(33921459-33921544)
chr6 (169-213)||(7359184-7359228)
chr6 (173-213)||(20383784-20383824)
chr6 (253-297)||(28539017-28539061)
[»] scaffold0034 (1 HSPs)
scaffold0034 (227-361)||(98820-98956)
[»] scaffold0006 (1 HSPs)
scaffold0006 (227-361)||(229818-229953)
[»] scaffold0058 (1 HSPs)
scaffold0058 (253-404)||(14477-14630)
[»] scaffold0321 (1 HSPs)
scaffold0321 (274-360)||(9529-9617)
[»] scaffold0227 (1 HSPs)
scaffold0227 (315-406)||(8949-9042)
[»] scaffold0221 (1 HSPs)
scaffold0221 (228-322)||(8883-8977)
[»] scaffold0003 (1 HSPs)
scaffold0003 (243-361)||(352439-352557)
[»] scaffold0028 (1 HSPs)
scaffold0028 (230-321)||(26611-26702)
[»] scaffold0007 (1 HSPs)
scaffold0007 (241-361)||(230265-230387)
[»] scaffold0685 (1 HSPs)
scaffold0685 (241-318)||(6421-6498)


Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 30 - 424
Target Start/End: Original strand, 9017601 - 9017995
Alignment:
Q  30 ctaaaaagacgaaaggtgcatgttgtgcaatcaaaaaccaaaaacaactcacgttaagttgttgccaattgctattacg-acattttagtcaaatacttc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||  |||||||||||    
T  9017601 ctaaaaagacgaaaggtgcatgttgtgcaatcaaaaaccaaaaacaactcacgttaagttgttgccaattgctattacccacatttttatcaaatacttc 9017700  T
Q  129 ctccgtcccataataactgagctaattattnnnnnnnnnngtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnncc 228  Q
     ||||||||||||||||||||  |||||||          |||||||||||||||| | ||||||||||||||||||||||||||  |||        ||    
T  9017701 ttccgtcccataataactgagacaattattaaaaaaaat-gtcctaaaataactgagtcgtttcacttttcaatacaatattaat--tacttttttttcc 9017797  T
Q  229 ctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagca 328  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9017798 ctttataatttcaattaatattgttttcatcacttccaattcaatatatttcactttgcatttataatagtggagaatgcaccaatacttaacaaaagca 9017897  T
Q  329 cttaaaactatttt--tctctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctgatacggaaagagtattat 424  Q
    ||||||||||||||  |||||||||||||||||||        ||||||||||||||||||||||| ||| |||||||||| |||||| |||||||||    
T  9017898 cttaaaactatttttctctctctttcatttatacattttttttaatatgtgtgaaatgagcttttgactcggttaatctgagacggaaggagtattat 9017995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 253 - 423
Target Start/End: Complemental strand, 39866639 - 39866467
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctc--tctt 350  Q
    ||||||||||  ||||| ||| ||||||||||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||||||  || |    
T  39866639 tttcatcactcacaattcaatgtatttcactttgcatttatgatagtggagaatacaccaatacttaacaaaatcacttaaaactatttttctctttcct 39866540  T
Q  351 tcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctgatacggaaagagtatta 423  Q
    |||||||||||        ||||||||||||||||| |||||||||||||||||||  ||||| |||| ||||    
T  39866539 tcatttatacatttttcttaatatgtgtgaaatgagtttttggctcagttaatctgggacggagagagcatta 39866467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 260 - 361
Target Start/End: Complemental strand, 54122303 - 54122200
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcattta 357  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  54122303 acttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaaaaacatttaaaactatttttctctctccttcattta 54122204  T
Q  358 taca 361  Q
    ||||    
T  54122203 taca 54122200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 260 - 359
Target Start/End: Complemental strand, 43639595 - 43639494
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcattta 357  Q
    |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||  ||||||||    
T  43639595 acttccaattcaatatatttcactttgcatttatgatagtggaaaatgcatcaatacttaacaacagcacttaaaaccatttttctctctccttcattta 43639496  T
Q  358 ta 359  Q
    ||    
T  43639495 ta 43639494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 227 - 404
Target Start/End: Complemental strand, 32827416 - 32827237
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  |||||||| ||| |||| ||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||  |    
T  32827416 ccctttataactctaattaatactactttcatcatttctaattcaatatatttcactttacatttatgatagtggagaatgcaccaatacgtaacaagtg 32827317  T
Q  327 cacttaaaactat--ttttctctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    |||||||||||||  ||||||||| ||||||||||||        |||| ||||||||||| |||||||||| |||||||    
T  32827316 cacttaaaactatttttttctctccttcatttatacatttttcttaatacgtgtgaaatgaacttttggctctgttaatc 32827237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 227 - 361
Target Start/End: Complemental strand, 32023213 - 32023076
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  ||||||||||  ||||||||||  ||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  32023213 ccctttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaag 32023114  T
Q  327 cacttaaaac-tatttttc--tctctttcatttataca 361  Q
     ||||||||| ||||||||  |||| ||||||||||||    
T  32023113 tacttaaaacttatttttctatctccttcatttataca 32023076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 48744280 - 48744370
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattttt 343  Q
    |||||||| || ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48744280 tttcatcattttcaattcaatatatttcactttacatttatgatagtggagaatgcatcaatacttaacaaatgcacttaaaactattttt 48744370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 26134789 - 26134679
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||  |  |||||||||||| |||||||||||| ||||||||||||  |    
T  26134789 tttcatcactcccaattcaatatatttcactttgcatttatgatagtggagaatagactaatacttaacaagagcacttaaaacaatttttctctctcct 26134690  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  26134689 tcatttataca 26134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 253 - 344
Target Start/End: Original strand, 26832092 - 26832183
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttc 344  Q
    |||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| || ||||| ||||||||||||||    
T  26832092 tttcatcactaccaatttaatatatttcactttgcatttatggtggtggagaatgcatcaatacttaataagagcacgtaaaactatttttc 26832183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 227 - 350
Target Start/End: Original strand, 54493903 - 54494026
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  |||||||| |||||||||||||||||||||||| ||||||| |||||||||||| |  |||||||||||||  |    
T  54493903 ccctttataactctaattaatactactttcatcatttccaatttaatatatttcactttacatttatgatagtggagaatacgccaatacttaacaagtg 54494002  T
Q  327 cacttaaaactatttttctctctt 350  Q
    ||||||||||||| ||||||||||    
T  54494003 cacttaaaactatatttctctctt 54494026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 241 - 404
Target Start/End: Original strand, 2868583 - 2868748
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  |||||||||| ||||||  || |||| |||||||||||||| | ||||||||||||| |||||| ||||||||| ||||||||| |||    
T  2868583 aattaatattactttcatcactcccaattcgatttattccactttgcatttatgacagtggagaatgcagcaatacataacaaaagaacttaaaaccatt 2868682  T
Q  341 tttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    |||||||||  ||||||||||||        ||||||||||||||||||   || |||||||||||    
T  2868683 tttctctctccttcatttatacatttttcttaatatgtgtgaaatgagcaaatgactcagttaatc 2868748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 406
Target Start/End: Complemental strand, 17777092 - 17776925
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||||| |||||||||||  | ||| |||||||| ||||||||||||||  ||||||||||||||  ||||||||| |||||||| |||||| |||    
T  17777092 aattaatattattttcatcactctcgattcaatatattccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacctaaaaccatt 17776993  T
Q  341 tttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
    |||||||||  ||||||||||||        |||| |||||||||||||   || |||||||||||||    
T  17776992 tttctctctcattcatttatacattttttttaatacgtgtgaaatgagcaaatgactcagttaatctg 17776925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 406
Target Start/End: Complemental strand, 19078393 - 19078226
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||||| |||||||||||  | ||| |||||||| ||||||||||||||  ||||||||||||||  ||||||||| |||||||| |||||| |||    
T  19078393 aattaatattattttcatcactctcgattcaatatattccactttgcatttatggtagtggagaatgcacaaatacttaaaaaaagcacctaaaaccatt 19078294  T
Q  341 tttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
    |||||||||  ||||||||||||        |||| |||||||||||||   || |||||||||||||    
T  19078293 tttctctctcattcatttatacattttttttaatacgtgtgaaatgagcaaatgactcagttaatctg 19078226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 10855015 - 10855125
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    ||||||||||| ||||| |||||||| |||||||||||||| | |||||| |||||| |||||| ||| |||| |||||||||||||||||||||||  |    
T  10855015 tttcatcactttcaattcaatatattccactttgcatttatgagagtggataatgcaccaatacataataaaaacacttaaaactatttttctctctcct 10855114  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  10855115 tcatttataca 10855125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 11251213 - 11251103
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa--ctatttttctctctt 350  Q
    ||||||||||  |||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||   | |||||||||| |    
T  11251213 tttcatcactcacaatttaatatagttcaatttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttttttctctcat 11251114  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  11251113 tcatttataca 11251103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 230 - 405
Target Start/End: Original strand, 41031570 - 41031750
Alignment:
Q  230 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataat---agtggagaatgcatcaatacttaacaaaag 326  Q
    ||||||| || |||||||| |  |||||||| |||||||| ||||||||||||||| ||||||| ||   |||||| |||||| |||||||||||||  |    
T  41031570 tttataactttaattaatactactttcatcatttccaattcaatatatttcactttacatttattatgatagtggaaaatgcaccaatacttaacaagtg 41031669  T
Q  327 cacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatct 405  Q
    ||||||||||||||||||| |||  ||| || |||||        |||| |||||||||||| ||||||||||||||||||    
T  41031670 cacttaaaactatttttctttcttcttctttcatacattttttttaatacgtgtgaaatgagattttggctcagttaatct 41031750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 54845602 - 54845492
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||| ||||| |||| |||||||| |||||||||||||| ||| | ||||||||||| || |||||||||| |||||||||||||||||||||||  |    
T  54845602 tttcattacttctaattcaatatattccactttgcatttatgatactagagaatgcatcgatccttaacaaaaacacttaaaactatttttctctctcct 54845503  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  54845502 tcatttataca 54845492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 242 - 360
Target Start/End: Complemental strand, 36097752 - 36097632
Alignment:
Q  242 attaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattt 341  Q
    |||||||||  ||||||||||  ||||| |||||||| |||||||||||| ||| ||||||||||||| | ||||||||||| || ||||||||| ||||    
T  36097752 attaatattactttcatcactctcaattcaatatattccactttgcatttctaacagtggagaatgcaccgatacttaacaagagtacttaaaaccattt 36097653  T
Q  342 ttctctct--ttcatttatac 360  Q
    ||||||||  |||||||||||    
T  36097652 ttctctctccttcatttatac 36097632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 5245433 - 5245529
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||||||  ||||| |||||||| ||||||| |||||| ||| |||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  5245433 tttcatcactctcaattcaatatattccactttgtatttatgatattggagaatacaccaatacttaacaagagcacttaaaactatttttctctct 5245529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 349
Target Start/End: Complemental strand, 14756212 - 14756104
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | |||| |||| || ||||||||||||||  ||||||||||||| ||||||||||||| | || |||||||||| ||||||||||| ||||    
T  14756212 aattaatactatttttatcattttcaatttaatatattctactttgcatttatgatagtggagaatgtaccagtacttaacaagagcacttaaaattatt 14756113  T
Q  341 tttctctct 349  Q
    |||||||||    
T  14756112 tttctctct 14756104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 404
Target Start/End: Original strand, 33994696 - 33994831
Alignment:
Q  271 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnnnn 368  Q
    |||||||| |||||| ||||||| ||||||||||||||| |||||||||||||  |||||||||| |||||||||||||  ||||||||||||           
T  33994696 aatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaattatttttctctctccttcatttatacatttttct 33994795  T
Q  369 naatatgtgtgaaatgagcttttggctcagttaatc 404  Q
      ||| |||||||||||||||||| ||| |||||||    
T  33994796 tgatacgtgtgaaatgagcttttgcctcggttaatc 33994831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 257 - 413
Target Start/End: Original strand, 54782988 - 54783146
Alignment:
Q  257 atcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcat 354  Q
    |||| |||||||| ||||||||||||||| ||||||| |||| | | |||||| |||||||||| ||  ||||||||||||||||||||||||  |||||    
T  54782988 atcatttccaattcaatatatttcactttacatttatgatagcgcataatgcaccaatacttaagaagtgcacttaaaactatttttctctctcattcat 54783087  T
Q  355 ttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctgatacgga 413  Q
    |||||||        |||| ||||| |||||| ||||| ||| |||||||||| |||||    
T  54783088 ttatacatttttcttaatacgtgtgcaatgagtttttgactcggttaatctgagacgga 54783146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 53876545 - 53876412
Alignment:
Q  230 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 329  Q
    |||||||||  ||||||| ||  ||||||||||  ||||| ||||||||||||||| ||||||| |||||||| ||||||  |||| |||||||||||||    
T  53876545 tttataattctaattaattttactttcatcactctcaattcaatatatttcactttacatttatgatagtggaaaatgcacaaatatttaacaaaagcac 53876446  T
Q  330 ttaaaa--ctatttttctctctttcatttataca 361  Q
    ||||||   | |||||| ||| ||||||||||||    
T  53876445 ttaaaatcatttttttcactccttcatttataca 53876412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 350
Target Start/End: Complemental strand, 54458407 - 54458298
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||||||||||| ||| |  ||||| |||||||| |||||| ||||||| ||| ||||||||||| | ||||||||||||| |||||||||  |||    
T  54458407 aattaatattgttttcctcattctcaattcaatatattccactttacatttatgataatggagaatgcacccatacttaacaaaatcacttaaaatcatt 54458308  T
Q  341 tttctctctt 350  Q
    ||||| ||||    
T  54458307 tttctatctt 54458298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 241 - 341
Target Start/End: Original strand, 45392099 - 45392199
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  |||||||| |||||||| ||||||||||||||| ||||||  ||||| || |||||| ||||| ||||||||  ||||||||||||||    
T  45392099 aattaatattactttcatcatttccaattcaatatatttcactttacatttacgatagtagataatgcaccaatagttaacaaattcacttaaaactatt 45392198  T
Q  341 t 341  Q
    |    
T  45392199 t 45392199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 350
Target Start/End: Original strand, 15082023 - 15082120
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctt 350  Q
    ||||||||||  ||||||||||||||||| ||||| ||||| ||| ||||||||||| ||||| ||||  | |||||||||||| || ||||||||||    
T  15082023 tttcatcactctcaatttaatatatttcattttgcttttatgataatggagaatgcaccaatatttaaagagagcacttaaaaccatatttctctctt 15082120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 361
Target Start/End: Complemental strand, 21296582 - 21296479
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcattta 357  Q
    |||||||||| ||||||||  ||||||||||||| |||||| | |||||| ||||||||||||| |||| ||||||  |||||  |||||| ||||||||    
T  21296582 acttccaattcaatatattctactttgcatttatgatagtgaaaaatgcaccaatacttaacaagagcatttaaaatcattttcctctctccttcattta 21296483  T
Q  358 taca 361  Q
    ||||    
T  21296482 taca 21296479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 11529209 - 11529122
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagca 328  Q
    ||||||||||  ||| ||||||   ||||||||||||| |||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  11529209 aattaatattacttttatcactcataatttaatatattccactttgcatttatgatattggagaatgtatcaatacttaacaagagca 11529122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 46786067 - 46785969
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaat--acttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||| || |||||| ||||||||||||||||||||||| ||||||||||||  | ||||  ||||||||| | || |||||||||||||| |||||    
T  46786067 tttcatcgctcccaattcaatatatttcactttgcatttatgatagtggagaatataccaatacacttaacaagatcatttaaaactatttttttctct 46785969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 349
Target Start/End: Complemental strand, 1772205 - 1772096
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatattt-cactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactat 339  Q
    ||||||||||  |||||||||| | |||| |||||| |  |||||||| ||||| ||||||||||||  | ||||||||||||| | |||||||||| ||    
T  1772205 aattaatattactttcatcactcctaattcaatataatcacactttgcttttatgatagtggagaatataccaatacttaacaagaacacttaaaaccat 1772106  T
Q  340 ttttctctct 349  Q
    ||||||||||    
T  1772105 ttttctctct 1772096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 55415513 - 55415429
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||| ||||| | |||||||| |||||| |||||  |||||||| ||||||||||||||| || ||||||| ||||||||||||    
T  55415513 caattcaatatgtgtcactttgtatttatgatagtaaagaatgcaccaatacttaacaaaaacagttaaaaccatttttctctct 55415429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 8706190 - 8706277
Alignment:
Q  272 atatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttataca 361  Q
    ||||||| ||||||||||||||    ||| |||||||||||||||||||||| |||||||||||  |||| |||||||  ||||||||||||    
T  8706190 atatattccactttgcatttat----gtgaagaatgcatcaatacttaacaagagcacttaaaatcatttctctctcttcttcatttataca 8706277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 9058077 - 9058164
Alignment:
Q  272 atatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttataca 361  Q
    ||||||| ||||||||||||||    ||| |||||||||||||||||||||| |||||||||||  |||| |||||||  ||||||||||||    
T  9058077 atatattccactttgcatttat----gtgaagaatgcatcaatacttaacaagagcacttaaaatcatttctctctcttcttcatttataca 9058164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 413
Target Start/End: Original strand, 17274750 - 17274864
Alignment:
Q  301 gagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcag 398  Q
    ||||||||||||||| ||||  |  ||| ||||||||||||||||| ||  ||||||||||||        |||||||||| ||||| ||||||||||||    
T  17274750 gagaatgcatcaatatttaatcagtgcatttaaaactatttttctccctccttcatttatacatttttcttaatatgtgtggaatgaacttttggctcag 17274849  T
Q  399 ttaatctgatacgga 413  Q
    ||||||||| |||||    
T  17274850 ttaatctgaaacgga 17274864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 323
Target Start/End: Complemental strand, 22202463 - 22202405
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 323  Q
    ||||||||||||||  ||||||||||||| |||||||| |||||| |||||||||||||    
T  22202463 caatttaatatattcaactttgcatttatgatagtggataatgcaccaatacttaacaa 22202405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 53583627 - 53583537
Alignment:
Q  272 atatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttc--tctctttcatttataca 361  Q
    |||||||  ||||||||||||||||| || ||||||||||||||||| |||| | || | |||||||||||||  |||||||| ||||||||    
T  53583627 atatattctactttgcatttataataatgaagaatgcatcaatacttgacaaca-cattcaaaactatttttctatctctttcttttataca 53583537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 15280626 - 15280735
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctt 350  Q
    |||||||||| |||||| |||||||| |||||| ||||||| |||||||||||| || | ||| | |||||  ||||||||||  |||||  |||||| |    
T  15280626 tttcatcactcccaattcaatatattccactttccatttatgatagtggagaataca-cgatagtgaacaagtgcacttaaaatcatttttatctctcct 15280724  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  15280725 tcatttataca 15280735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 12744835 - 12744897
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaata 315  Q
    |||||||||| | |||| |||||| | |||||||||||| ||||||||||||||||| |||||    
T  12744835 tttcatcactcctaattcaatataatccactttgcatttctaatagtggagaatgcaccaata 12744897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 37041959 - 37041906
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaat 306  Q
    |||||||| |||||||| |||||||||||||||  |||||| ||||||||||||    
T  37041959 tttcatcatttccaattcaatatatttcactttatatttatgatagtggagaat 37041906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 52325210 - 52325290
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttct 345  Q
    ||||| |||||||| |||||||||||||| |||| | |||||||| |||||| |||||| | |||| |||||  |||||||    
T  52325210 caattcaatatattccactttgcatttatgatagcgtagaatgcaccaatacataacaataacactaaaaaccctttttct 52325290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 360
Target Start/End: Complemental strand, 1334892 - 1334758
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  |||||||| |  ||||| |||| |||||| ||||||||  ||||| ||||||| |||  | |||||||| |||||||| | ||| ||    
T  1334892 cctttataactctaattaatactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaggc 1334793  T
Q  328 acttaaaactatttttct--ctctttcatttatac 360  Q
    | | |||| |||||||||  |||||||||||||||    
T  1334792 attcaaaattatttttctctctctttcatttatac 1334758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 49003280 - 49003338
Alignment:
Q  242 attaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtg 300  Q
    ||||||||| |||||||||||| ||||| |||||||| ||| || ||||||| ||||||    
T  49003280 attaatattcttttcatcactttcaattcaatatattccaccttacatttatgatagtg 49003338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 50150475 - 50150413
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 293  Q
    ||||||||  |||||||||| |||||| |||| |||||||||||||||| | ||| |||||||    
T  50150475 ttataattctaattaatattattttcaccactcccaatttaatatattttaatttacatttat 50150413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 8706089 - 8706130
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatatt 210  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  8706089 gtcctaaaaaaactgacatgtttcacttttcaatacaatatt 8706130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 9057976 - 9058017
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatatt 210  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  9057976 gtcctaaaaaaactgacatgtttcacttttcaatacaatatt 9058017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 26142950 - 26142987
Alignment:
Q  283 tttgcatttataatagtggagaatgcatcaatacttaa 320  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  26142950 tttgcatttatgatagtggagaatgcaccaatacttaa 26142987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 39329858 - 39329727
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||  |||||||| |  ||||||||||  ||||| ||||||||  ||||||||||||| |||    |||||||| ||||||||||||| | || |    
T  39329858 ttataattctaattaatactactttcatcactctcaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaaga-catt 39329760  T
Q  331 taaaactatttttc--tctctttcatttataca 361  Q
     |||||||||| ||  ||||||||| |||||||    
T  39329759 caaaactatttatctttctctttcacttataca 39329727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 2868515 - 2868559
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    ||||||||||||||||    |||||||||||||||||||||||||    
T  2868515 gtcctaaaataactgatccatttcacttttcaatacaatattaat 2868559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 8754306 - 8754342
Alignment:
Q  34 aaagacgaaaggtgcatgttgtgcaatcaaaaaccaa 70  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  8754306 aaagacgaaaggtgcatgctgtgcaatctaaaaccaa 8754342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 9218166 - 9218261
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||||||  ||||| | ||||||  ||||||||||||| |||    |||||||| ||||||||||| | | |||| ||||||||||||||||||    
T  9218166 tttcatcactctcaattcattatattctactttgcatttatgataagaaagaatgcaccaatacttaacgaga-cactcaaaactatttttctctct 9218261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 32023267 - 32023223
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||    
T  32023267 gtcctaaaataactgagtcatttcactttccaatacaatattaat 32023223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 43640731 - 43640687
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  43640731 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 43640687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 49006269 - 49006328
Alignment:
Q  304 aatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcatttataca 361  Q
    |||| ||||||||||||| ||| ||||||||||||||||  | |||| ||||||||||||    
T  49006269 aatggatcaatacttaactaaaacacttaaaactattttcatatctccttcatttataca 49006328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 9e-43; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 227 - 404
Target Start/End: Complemental strand, 11099590 - 11099411
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  |||||||||| |||||| |||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||     
T  11099590 ccctttataactctaattaatactactttcatcactcccaattcaatatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaa 11099491  T
Q  327 cacttaaaactatttttct--ctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    |||||||||||||||||||  ||||||||||||||||        ||||||||||||||||| |||||||||||||||||    
T  11099490 cacttaaaactatttttctctctctttcatttatacatttttcttaatatgtgtgaaatgagtttttggctcagttaatc 11099411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 172 - 420
Target Start/End: Original strand, 25814308 - 25814554
Alignment:
Q  172 ctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaattta 271  Q
    |||||||||||||||  |||||||||||||||||||||||||  |||        || ||||||| || ||||||||||  | |||||| |||||||| |    
T  25814308 ctaaaataactgaatcatttcacttttcaatacaatattaat--tactttttt--ccttttataactttaattaatattactctcatcatttccaattca 25814403  T
Q  272 atatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnnnnn 369  Q
    |||||||||||||| ||||||| |||||||| |||| | |||||||||||||  ||||||||||||||||||||||||  ||||||||| ||            
T  25814404 atatatttcactttacatttatgatagtggataatgtaccaatacttaacaagtgcacttaaaactatttttctctctccttcatttatgcatttttctt 25814503  T
Q  370 aatatgtgtgaaatgagcttttggctcagttaatctgatacggaaagagta 420  Q
    |||| ||||||||| |||||||||||||||||||| || |||||| |||||    
T  25814504 aatacgtgtgaaataagcttttggctcagttaatccgagacggaaggagta 25814554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 169 - 413
Target Start/End: Original strand, 3725128 - 3725369
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 268  Q
    |||||||||||||||| |  |||||||||||||||||||||||||  |          |||||||||| |  ||||||||||  ||||||||||  ||||    
T  3725128 gtcctaaaataactgagtcatttcacttttcaatacaatattaatttt-----tttttccctttataactctaattaatattactttcatcactcacaat 3725222  T
Q  269 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnn 366  Q
    |  ||||||| |||| ||||||||| ||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||  ||| ||||||||         
T  3725223 tcgatatattccactatgcatttatgatagtggagaatgcaccaatacttaacaatagcacttaaaaccatttttctctctccttcctttatacattttt 3725322  T
Q  367 nnnaatatgtgtgaaatgagcttttggctcagttaatctgatacgga 413  Q
       |||||||||||||||||  | ||||||| |||||| || |||||    
T  3725323 cttaatatgtgtgaaatgagaatatggctcaattaatccgaaacgga 3725369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 228 - 347
Target Start/End: Original strand, 7613703 - 7613822
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  ||||||||||  ||| |||| |||||||| ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||  ||    
T  7613703 cctttataactataattaatattacttttatcatttccaattcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaacaagtgc 7613802  T
Q  328 acttaaaactatttttctct 347  Q
    ||||||||||||||||||||    
T  7613803 acttaaaactatttttctct 7613822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 346
Target Start/End: Complemental strand, 8692930 - 8692812
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  ||||||||||  |||||  |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| | |    
T  8692930 cctttataactctaattaatattactttcacaacttccaatttaatatatttcattttgcatttatgatagtggagaatgcaccaatacttaacaagaac 8692831  T
Q  328 acttaaaactatttttctc 346  Q
    ||||||||| |||||||||    
T  8692830 acttaaaaccatttttctc 8692812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 227 - 361
Target Start/End: Complemental strand, 42575751 - 42575615
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| || |||||||| |  |||||  |||||||||| |||||||| |||||||||||||| |||||||||||| || ||||||||| ||| ||    
T  42575751 ccctttataactttaattaatactactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaatacaccaatacttaccaagag 42575652  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
    |||||||||| ||||||||||||  ||||||||||||    
T  42575651 cacttaaaaccatttttctctctcattcatttataca 42575615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 413
Target Start/End: Original strand, 6610776 - 6611020
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 268  Q
    |||| ||||||||||| |  |||||||||| ||||||||||||||  |||        | |||||||| || ||||||||||  |||||||||| | |||    
T  6610776 gtcccaaaataactgagtcatttcacttttaaatacaatattaat--tacttttttttctctttataactttaattaatattactttcatcactccgaat 6610873  T
Q  269 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnn 366  Q
    | ||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||| ||||||||   ||||||||||||  |||||| |||||         
T  6610874 tcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaataaaaacacttaaactcatttttctctctccttcattgatacattttt 6610973  T
Q  367 nnnaatatgtgtgaaatgagcttttggctcagttaatctgatacgga 413  Q
       ||| | |||||||||| | |||||||||||||| |||| |||||    
T  6610974 cttaatctatgtgaaatgatcatttggctcagttaaactgagacgga 6611020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 241 - 361
Target Start/End: Complemental strand, 39183726 - 39183604
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  ||||||||||  ||||| |||||||| |||||||||||||| |||||||||||| |||||||||||||| |||||||||||||  |||    
T  39183726 aattaatattactttcatcactctcaattcaatatattccactttgcatttatgatagtggagaattcatcaatacttaacgaaagcacttaaaatcatt 39183627  T
Q  341 tt--tctctctttcatttataca 361  Q
    ||  ||||| |||||||||||||    
T  39183626 tttatctctttttcatttataca 39183604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 404
Target Start/End: Original strand, 20189887 - 20190065
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  ||||||||||  |||||||| |  ||||| |||||||| |||||| ||||||| ||| |||||||||||||| ||||||||||| |    
T  20189887 ccctttataactctaattaatattactttcatcattctcaattcaatatattccactttacatttatgataatggagaatgcatcagtacttaacaaatg 20189986  T
Q  327 cacttaaaactatttt---tctctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    ||||||||||||||||   |||||| ||||||||| ||        ||||   ||||||||||||||||||||||||||||    
T  20189987 cacttaaaactattttttatctctccttcatttatgcatttttcttaata--cgtgaaatgagcttttggctcagttaatc 20190065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 260 - 349
Target Start/End: Complemental strand, 8369776 - 8369687
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||    
T  8369776 actttcaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaacaagagcatttaaaacaatttttctctct 8369687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 33988195 - 33988331
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||| |||||  |||||| ||| |||||| |||||||| |||||| ||||||| |||||||||||| || |||||||||||||||     
T  33988195 ccctttataactctaattcatattactttcattactcccaattcaatatattccactttacatttatgatagtggagaatacaccaatacttaacaaaaa 33988294  T
Q  327 cacttaaaactatttttc--tctctttcatttataca 361  Q
    |||||||||| |||||||  |||| ||||||||||||    
T  33988295 cacttaaaaccatttttctttctccttcatttataca 33988331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 359
Target Start/End: Complemental strand, 35334613 - 35334505
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||||||| |||||| |||||||| |||||||||||||| ||||||||||||  |  ||||||||| || |||||||||||||||||||||||||  |    
T  35334613 tttcatcactcccaattcaatatattccactttgcatttatgatagtggagaatagacaaatacttaataagagcacttaaaactatttttctctctcct 35334514  T
Q  351 tcatttata 359  Q
    |||||||||    
T  35334513 tcatttata 35334505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 32539671 - 32539779
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | |||||||||||||| ||||||||||||| | ||| ||||||| ||||||||||||||| |||||| ||| ||||||||||||||| ||     
T  32539671 aattaatactattttcatcacttccgatttaatatattttattttacatttatgatagtggagaatgcaccaatacataataaaagcacttaaaaccatc 32539770  T
Q  341 tttctctct 349  Q
    ||| |||||    
T  32539771 tttgtctct 32539779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 350
Target Start/End: Complemental strand, 22582951 - 22582862
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctt 350  Q
    |||||||||| ||||| || |||||||||||||| |||||||||||||||||| |||||||||| |||||||||||  |||||||||||||    
T  22582951 acttccaattcaatat-ttccactttgcatttatgatagtggagaatgcatcattacttaacaagagcacttaaaatcatttttctctctt 22582862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 353
Target Start/End: Original strand, 25108572 - 25108694
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||| |||||||| |  ||||| ||||||||||| ||||||||  ||||| ||||||| |||  | |||||||| ||||||||||||||  ||||    
T  25108572 ttataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacact 25108671  T
Q  331 taaaactatttttctctctttca 353  Q
     ||||||||||||||||||||||    
T  25108672 caaaactatttttctctctttca 25108694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 353
Target Start/End: Original strand, 25167664 - 25167786
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||| |||||||| |  ||||| ||||||||||| ||||||||  ||||| ||||||| |||  | |||||||| ||||||||||||||  ||||    
T  25167664 ttataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagacact 25167763  T
Q  331 taaaactatttttctctctttca 353  Q
     ||||||||||||||||||||||    
T  25167764 caaaactatttttctctctttca 25167786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 359
Target Start/End: Complemental strand, 35646169 - 35646068
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcattta 357  Q
    ||||| |||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||  ||||||||||||  ||||||||    
T  35646169 acttctaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaacaagatcacttaaaatcatttttctctctcattcattta 35646070  T
Q  358 ta 359  Q
    ||    
T  35646069 ta 35646068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 17935221 - 17935353
Alignment:
Q  230 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 329  Q
    |||||||||| |||||||||| |||||||||||  ||||||| |||||||||||||| |||||| ||  || ||||||||  |||| ||||||| | |||    
T  17935221 tttataattttaattaatattattttcatcactatcaatttattatatttcactttgtatttatgatgatgtagaatgcactaatatttaacaagaacac 17935320  T
Q  330 ttaaaacta-tttttctctctttcatttataca 361  Q
    ||||| ||| |||||||| | ||||||||||||    
T  17935321 ttaaacctattttttctcaccttcatttataca 17935353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 6735456 - 6735377
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaa 320  Q
    ||||||||||  |||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||  |||||||||    
T  6735456 aattaatattactttcatcacttcaaatttaatatattccactttgcatttatgatagtggagaatgcacaaatacttaa 6735377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 16283674 - 16283564
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac--tatttttctctctt 350  Q
    ||||||||||  ||||| |||||||| |||||||||||||| ||||| ||||||||| |||||| |||||||| || |||||||  | |||||||||| |    
T  16283674 tttcatcactctcaattcaatatattccactttgcatttatgatagttgagaatgcaccaatacataacaaaatcatttaaaaccatttttttctctcct 16283575  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  16283574 tcatttataca 16283564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 361
Target Start/End: Complemental strand, 17741207 - 17741148
Alignment:
Q  302 agaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttcatttataca 361  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  17741207 agaatgcatcaatacttaacaaaggcactcaaaactatttttctctctttcatttataca 17741148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 361
Target Start/End: Original strand, 39008156 - 39008263
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagt----ggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttca 353  Q
    |||||||||| ||||||||||||||| ||||||| |||||    |||||||| | ||||||||||||| |||||||||||| ||||||||||||  ||||    
T  39008156 acttccaattcaatatatttcactttacatttatgatagttagtggagaatgaaccaatacttaacaagagcacttaaaaccatttttctctctccttca 39008255  T
Q  354 tttataca 361  Q
    ||||||||    
T  39008256 tttataca 39008263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 41184730 - 41184836
Alignment:
Q  302 agaatgcatcaatacttaacaaaagcacttaaaactatttttc--tctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagt 399  Q
    |||||||| |||||||||||||  |||||||||||||||||||  |||| ||||||||||||        |||| |||||||||||||||||||||||||    
T  41184730 agaatgcaccaatacttaacaagtgcacttaaaactatttttctttctccttcatttatacatttttcttaatacgtgtgaaatgagcttttggctcagt 41184829  T
Q  400 taatctg 406  Q
    |||||||    
T  41184830 taatctg 41184836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 353
Target Start/End: Complemental strand, 25111257 - 25111135
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||| |||||||| |  ||||| ||||||||||| ||||||||  ||||| ||||||| |||  | |||||||| |||||||| |||||  ||||    
T  25111257 ttataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacact 25111158  T
Q  331 taaaactatttttctctctttca 353  Q
     ||||||||||||||||||||||    
T  25111157 caaaactatttttctctctttca 25111135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 353
Target Start/End: Complemental strand, 25170348 - 25170226
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||| |||||||| |  ||||| ||||||||||| ||||||||  ||||| ||||||| |||  | |||||||| |||||||| |||||  ||||    
T  25170348 ttataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagacact 25170249  T
Q  331 taaaactatttttctctctttca 353  Q
     ||||||||||||||||||||||    
T  25170248 caaaactatttttctctctttca 25170226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 6629480 - 6629373
Alignment:
Q  253 tttcatcacttccaatttaatatattt-cactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctcttt 351  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||    |||||||| |||||||| |||| | |||| ||||||| ||||||||||||    
T  6629480 tttcatcactcccaatttaatatatttccactttgcatttataataaaaaagaatgcaccaatacttgacaaga-cactcaaaacta-ttttctctcttt 6629383  T
Q  352 catttataca 361  Q
    ||||||||||    
T  6629382 catttataca 6629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 361
Target Start/End: Complemental strand, 17243067 - 17242931
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  ||||||||||  ||||| |||||||| |||||||||||||| ||||| ||||||  | ||||||||||||| ||    
T  17243067 ccctttataactctaattaatactactttcatcactctcaattcaatatattccactttgcatttatgatagtagagaatagaccaatacttaacaagag 17242968  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
     ||| ||||| ||||||||||||  ||||||||||||    
T  17242967 tactaaaaaccatttttctctctcattcatttataca 17242931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 24231031 - 24231127
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||||| || ||||| |||||||| |||||| |||||||  |||||||||||||||||||||||||||| | || ||||||  ||||||||||||    
T  24231031 tttcatcagtttcaattcaatatattccactttccatttatggtagtggagaatgcatcaatacttaacaagaacagttaaaatcatttttctctct 24231127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 241 - 353
Target Start/End: Original strand, 35666894 - 35667006
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | |||||||||||  ||  | ||||||||  |||||| |||||||||| |||  |||||| |||||||||| |||||||||||||||||||    
T  35666894 aattaataatattttcatcactctcacatcaatatattctactttgtatttataataatggtaaatgcaccaatacttaagaaaagcacttaaaactatt 35666993  T
Q  341 tttctctctttca 353  Q
    |||||||| ||||    
T  35666994 tttctctccttca 35667006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 387
Target Start/End: Complemental strand, 36469203 - 36469045
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||  |||||||| |  |||||||||||  |||| ||||||||  ||||||||||||| ||||||||||||||| |||||| |||||||| ||||    
T  36469203 ttataattctaattaatactactttcatcacttttaattcaatatattatactttgcatttatgatagtggagaatgcaccaatacataacaaaaacact 36469104  T
Q  331 taaaa--ctatttttctctctttcatttatacannnnnnnnaatatgtgtgaaatgagc 387  Q
    || ||   | ||||| |||| ||||||||||||        ||||||||||||||||||    
T  36469103 tataatcatttttttatctccttcatttatacatttttcttaatatgtgtgaaatgagc 36469045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 33012375 - 33012484
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||||||| ||||||  ||||||| ||||||| |||| ||| ||||| |||||||  |||||||||||| |||||||||||| |||||| |||||  |    
T  33012375 tttcatcactcccaattctatatattccactttgaatttctaagagtggtgaatgcacaaatacttaacaagagcacttaaaaccatttttatctcttct 33012474  T
Q  351 tcatttatac 360  Q
    ||||||||||    
T  33012475 tcatttatac 33012484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 335
Target Start/End: Original strand, 14259665 - 14259770
Alignment:
Q  230 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 329  Q
    |||||||||  ||||||||||  |||||| ||| ||||||||| |||||  ||||||||||||||| |||| |||||||||   || |||||||||||||    
T  14259665 tttataattctaattaatattaatttcattactcccaatttaacatattatactttgcatttataacagtgtagaatgcatatgtatttaacaaaagcac 14259764  T
Q  330 ttaaaa 335  Q
    ||||||    
T  14259765 ttaaaa 14259770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 346
Target Start/End: Original strand, 42211329 - 42211443
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  |||||||| |  ||||||||||  ||||| ||||||||||||||||||||||| |||||||| ||| |    ||||||||||| |||    
T  42211329 cctttataactcaaattaatactactttcatcactcacaattcaatatatttcactttgcatttatgatagtggaaaatac----atacttaacaagagc 42211424  T
Q  328 acttaaaactatttttctc 346  Q
    ||||||||| |||||||||    
T  42211425 acttaaaaccatttttctc 42211443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 35585725 - 35585633
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 323  Q
    |||||| || ||| ||||||  ||||||||||  ||||| ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||    
T  35585725 ttataactttaatcaatattactttcatcactctcaattcaatatatttcactttgtctttatgatagtggataatgcatcaatacttaacaa 35585633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 36446774 - 36446695
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcactta 332  Q
    ||||||||||| ||||| ||||||||  ||||||||||||| |||||||||||||||  ||||| |||||||| ||||||    
T  36446774 tttcatcactttcaattcaatatattatactttgcatttatgatagtggagaatgcacaaatacataacaaaaacactta 36446695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 387
Target Start/End: Original strand, 858331 - 858492
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  |||||||| |  ||||||||||  ||||| ||||||||||| ||||||||||| ||| ||||||||| | ||||| ||||||| |      
T  858331 cctttataactctaattaatactactttcatcactctcaattaaatatatttcattttgcatttatgataatggagaatgtaccaatatttaacaagata 858430  T
Q  328 acttaaaac--tatttttctctctttcatttatacannnnnnnnaatatgtgtgaaatgagc 387  Q
    |||||||||  | |||||||||| || |||||||||        ||||||||||||||||||    
T  858431 acttaaaaccatttttttctctcctttatttatacatttttcttaatatgtgtgaaatgagc 858492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 13135748 - 13135874
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| || ||||| || |  |||||||||| | |||| |||||||| |||||||||||||| ||||||||||||||| |        ||||||     
T  13135748 ccctttataactttaattactactactttcatcactcctaattcaatatattccactttgcatttatgatagtggagaatgcacc--------acaaaaa 13135839  T
Q  327 cacttaaaactatttttctctctttcatttataca 361  Q
    |||||||||| |||| |||||| ||||||||||||    
T  13135840 cacttaaaaccatttctctctccttcatttataca 13135874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 345
Target Start/End: Original strand, 15254774 - 15254878
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  ||||||||||| ||||| ||||||||  | |||||||| || |||| ||||||||||  ||||| |||||||| |||||||||  |||    
T  15254774 aattaatattactttcatcactttcaattcaatatattctaatttgcattaatgatagcggagaatgcactaatacataacaaaaacacttaaaatcatt 15254873  T
Q  341 tttct 345  Q
    |||||    
T  15254874 tttct 15254878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 361
Target Start/End: Complemental strand, 36006991 - 36006872
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||||| |||||| ||||||||||| | ||||||  ||||| ||||||| |||  | ||||||||  ||||||| |||||  |||||||||| | |    
T  36006991 aattaatattattttcaccacttccaattcagtatattctactttacatttatgataaagaagaatgcacaaatacttgacaaagacacttaaaacca-t 36006893  T
Q  341 tttctctctttcatttataca 361  Q
    ||||||||||| |||||||||    
T  36006892 tttctctcttttatttataca 36006872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 361
Target Start/End: Original strand, 4412325 - 4412512
Alignment:
Q  170 tcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatt 269  Q
    ||||||||||||| | |  |||||||||||||||||||||||||  |||        |||||||||| |  |||||||| | ||||||||| ||| ||||    
T  4412325 tcctaaaataactaagtcatttcacttttcaatacaatattaat--tactttttt--ccctttataactctaattaatactattttcatcatttctaatt 4412420  T
Q  270 taatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttataca 361  Q
     |||||||| || |   ||||||||||||| |||||||||||||||||||||||    |||||| |  ||||||||||||  ||||||||||||    
T  4412421 caatatattccagta--catttataatagtagagaatgcatcaatacttaacaagtagacttaatatcatttttctctctccttcatttataca 4412512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 350
Target Start/End: Complemental strand, 6173067 - 6172970
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctt 350  Q
    ||||||||||  ||||| ||||||||  ||||||||||||| ||| |||  ||||||| |||| || | || ||||||||||||||||||| ||||||    
T  6173067 tttcatcactcacaattcaatatattatactttgcatttatgataatggtaaatgcattaatatttgataagagcacttaaaactatttttatctctt 6172970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 349
Target Start/End: Complemental strand, 5357916 - 5357808
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  ||||| ||||||||||  ||||||||  ||||| ||||||| |||  | |||||| | ||||||||||||||  |||| ||||| |||    
T  5357916 aattaatattactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacactcaaaaccatt 5357817  T
Q  341 tttctctct 349  Q
    |||||||||    
T  5357816 tttctctct 5357808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 7311267 - 7311159
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttc 352  Q
    ||||||||||   |||| ||||||||  ||||||||||||| ||| |||  ||||||  ||||||| | || |||||||||||| ||||||||||||||     
T  7311267 tttcatcactcttaattcaatatattctactttgcatttatgataatggtaaatgcacaaatacttgataagagcacttaaaaccatttttctctctttt 7311168  T
Q  353 atttataca 361  Q
    ||| |||||    
T  7311167 attaataca 7311159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 39060509 - 39060413
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||| ||||||||||  |||||| |  ||||||||||||| |||  | |||||| | |||||||||||||| ||||| ||||| ||||||||||||    
T  39060509 tttcaccacttccaatacaatatagtctactttgcatttatgataaagaagaatggaccaatacttaacaaatgcactcaaaaccatttttctctct 39060413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 16926171 - 16926069
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttct--ctctttcattta 357  Q
    |||||||||| ||||||||  ||||| ||||||| |||  | |||||||| ||||||||||| || ||||| ||||| ||||||||  |||||||| |||    
T  16926171 acttccaattcaatatattctactttccatttatgataaagaagaatgcaccaatacttaacgaaggcactcaaaaccatttttctcactctttcactta 16926072  T
Q  358 tac 360  Q
    |||    
T  16926071 tac 16926069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 349
Target Start/End: Original strand, 35988633 - 35988750
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    |||||| || |||||||||   ||||| |||| |||||| ||||||||  ||||||||||||| |||     ||||||| |||||||| |||| | ||||    
T  35988633 ttataactttaattaatatcactttcaccactcccaattcaatatattcaactttgcatttatgataagaatgaatgcaccaatacttgacaaca-cact 35988731  T
Q  331 taaaactatttttctctct 349  Q
    |||||||||||||||||||    
T  35988732 taaaactatttttctctct 35988750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 7276324 - 7276368
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  7276324 gtcctaaaataactgagttattttacttttcaatacaatattaat 7276368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 35585784 - 35585740
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||| |||||  |||||||||||||||||||||||||||    
T  35585784 gtcctaaaattactgatatgtttcacttttcaatacaatattaat 35585740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 350
Target Start/End: Complemental strand, 30437826 - 30437729
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctt 350  Q
    ||||||||||||| || |||| ||||  ||||| ||||||| |||  | | |||| | ||||| ||||||||| |||| |||||||||||||| ||||    
T  30437826 tttcatcacttccgatataatctattctactttacatttatgataaagaataatggaccaataattaacaaaaacactcaaaactatttttctgtctt 30437729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 4044643 - 4044599
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||| ||||||| |||||  |||||||||||||||||||||||||    
T  4044643 gtcccaaaataattgaatcatttcacttttcaatacaatattaat 4044599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 9426720 - 9426676
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||| ||| |  |||||||||||||||||||||||||    
T  9426720 gtcctaaaataattgactcatttcacttttcaatacaatattaat 9426676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 13422514 - 13422474
Alignment:
Q  173 taaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||| |  |||||||||||||||||||||||||    
T  13422514 taaaataactgattcatttcacttttcaatacaatattaat 13422474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 13597970 - 13598014
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||| ||| |  |||||||||||||||||||||||||    
T  13597970 gtcctaaaataattgactcatttcacttttcaatacaatattaat 13598014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 15564987 - 15564935
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 293  Q
    ||||||||||  ||||||||||  ||||||||||||||  |||||||||||||    
T  15564987 aattaatattactttcatcactctcaatttaatatattctactttgcatttat 15564935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 15898200 - 15898308
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  ||||| ||||  ||||| ||||||||  ||||||||||||| |||  | |||||||||||||| |||| ||   ||||||||   |||    
T  15898200 aattaatattactttcaccactctcaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttaataaggacacttaaactcatt 15898299  T
Q  341 tttctctct 349  Q
    |||||||||    
T  15898300 tttctctct 15898308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 22583038 - 22582994
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    ||||| |||||||||| || ||||| |||||||||||||||||||    
T  22583038 gtccttaaataactgagttatttcaattttcaatacaatattaat 22582994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 28057866 - 28057807
Alignment:
Q  304 aatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttataca 361  Q
    ||||||||||||||||||||   || |||||| |||||||||||||  ||||||||||||    
T  28057866 aatgcatcaatacttaacaagtacatttaaaattatttttctctctccttcatttataca 28057807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 39008070 - 39008114
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||||| | |  |||||||||||||||||||||||||    
T  39008070 gtcctaaaataactaagtcatttcacttttcaatacaatattaat 39008114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 227 - 404
Target Start/End: Complemental strand, 36467308 - 36467129
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| | ||||||||| |||||||| ||||||||||||||| ||||||| |||||||||||| || |||||||||||||  |    
T  36467308 ccctttataactcaaattaatactattttcatcatttccaattcaatatatttcactttacatttatcatagtggagaatccaccaatacttaacaagtg 36467209  T
Q  327 cacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    |||||||||||||||||||||||  ||||||||||||        |||| ||||||||||||||||||||||| ||||||    
T  36467208 cacttaaaactatttttctctctcattcatttatacatttttcttaatacgtgtgaaatgagcttttggctcatttaatc 36467129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 230 - 404
Target Start/End: Complemental strand, 50267548 - 50267372
Alignment:
Q  230 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 329  Q
    |||||||||  ||||||||||  |||||||| | |||||| ||||||||||||||| ||||||| ||| ||||||||||| |||||||||||||  ||||    
T  50267548 tttataattctaattaatattactttcatcattcccaattcaatatatttcactttacatttatgataatggagaatgcaccaatacttaacaagtgcac 50267449  T
Q  330 ttaaaactatttttctct--ctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    ||||||||||||||||||  ||||||||||||||        |||| ||||||||||| |||||| |||||||||||    
T  50267448 ttaaaactatttttctctcactttcatttatacatttttcttaatacgtgtgaaatgaacttttgactcagttaatc 50267372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 173 - 413
Target Start/End: Complemental strand, 52830576 - 52830339
Alignment:
Q  173 taaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatttaa 272  Q
    |||||||||||| |  |||||||||||||||||||||||||  |||        | ||||||||||| ||||| ||||  |||||||| |||||||| ||    
T  52830576 taaaataactgagtcatttcacttttcaatacaatattaat--tac--ttttttctctttataattttaattagtattactttcatca-ttccaattgaa 52830482  T
Q  273 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnnnnna 370  Q
    |||||| |||||| ||||||| |||||||| |||||| |||||||||||||| ||||| |||| |||||||||||||  ||||||||||||        |    
T  52830481 tatattccactttacatttatgatagtggaaaatgcaccaatacttaacaaatgcactcaaaattatttttctctctccttcatttatacatttttttta 52830382  T
Q  371 atatgtgtgaaatgagcttttggctcagttaatctgatacgga 413  Q
    ||| |||||||||||||||||||||| ||||||| || |||||    
T  52830381 atacgtgtgaaatgagcttttggctcggttaatccgaaacgga 52830339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 228 - 404
Target Start/End: Complemental strand, 49494275 - 49494097
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| || ||||||||||  |||||||| ||| |||| |||||||| |||||| ||||||| ||||||||||||  | ||||| |||||||  ||    
T  49494275 cctttataactttaattaatattactttcatcatttctaattcaatatattccactttacatttatgatagtggagaattgaccaatatttaacaagtgc 49494176  T
Q  328 acttaaaactatttttct--ctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    ||||||||||||||||||  ||||||||||||||||        |||| ||||||||||||||||| ||||||||||||    
T  49494175 acttaaaactatttttctctctctttcatttatacatttttcttaatacgtgtgaaatgagcttttagctcagttaatc 49494097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 32587786 - 32587950
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctct--ctt 350  Q
    ||||||||||  ||||| ||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||| |||||||||||  | |    
T  32587786 tttcatcactctcaattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacacttaaaattatttttctctcacct 32587885  T
Q  351 tcatttatacannnnnnnnaatatgtgtgaaat--gagcttttggctcagttaatctgatacgga 413  Q
    |||||||||||        ||||||||||||||  ||||||||| ||||||||| |||| |||||    
T  32587886 tcatttatacatttttcttaatatgtgtgaaatgagagcttttgactcagttaagctgagacgga 32587950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 241 - 413
Target Start/End: Original strand, 43895856 - 43896029
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||||| |||| || |||  ||||| ||||||||  ||||||||||||| |||||||||||  || ||||||||||||||| ||| ||||||||||    
T  43895856 aattaatattatttttattactctcaattcaatatattcaactttgcatttatgatagtggagaacacaccaatacttaacaaaaacacataaaactatt 43895955  T
Q  341 tt-tctctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctgatacgga 413  Q
    || |||||||||||| ||||||        |||||||||||||||||||||||||| | ||||||||| |||||    
T  43895956 ttctctctctttcatctatacatttttcttaatatgtgtgaaatgagcttttggcttaattaatctgagacgga 43896029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 227 - 387
Target Start/End: Complemental strand, 5040688 - 5040526
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    ||||||| || || ||||| || | ||||||||||| | |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |     
T  5040688 ccctttacaactttaattattactattttcatcactcctaattcaatatatttcacttcgcatttatgatagtggagaatgcatcaatacttaacaagat 5040589  T
Q  327 cacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagc 387  Q
    ||| |||||| ||||||||||||  ||||||||||||        ||||||||||||||||||    
T  5040588 cacctaaaaccatttttctctctcattcatttatacatttgtctaaatatgtgtgaaatgagc 5040526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 28839334 - 28839470
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  |||||||||| |||||| |||||||| |||||||||||||| ||||||||||||  | ||||||||||||| ||    
T  28839334 ccctttataactataattaatactactttcatcactcccaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaacaagag 28839433  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
    || ||||||||||||||||||||  ||||||||||||    
T  28839434 catttaaaactatttttctctctccttcatttataca 28839470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 406
Target Start/End: Complemental strand, 19533032 - 19532852
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| || |||||||| |  |||||||| || || || ||||||||||||||| ||||||| ||||||||||||| | |||||||||||||       
T  19533032 ccctttataactttaattaatactactttcatcatttacagttcaatatatttcactttacatttatgatagtggagaatgaaccaatacttaacaagta 19532933  T
Q  327 cacttaaaactatttttctc--tctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
    ||||||||||||||||||||  || |||||||||| |        |||| |||||||||||||||||| |||||||||||||    
T  19532932 cacttaaaactatttttctctatccttcatttatata-tttttttaataggtgtgaaatgagcttttgactcagttaatctg 19532852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 26755971 - 26756107
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  |||||||| || ||||| |||||||| ||||||  |||||| |||||||||||||||||||||||||||||  |    
T  26755971 ccctttataactctaattaatactactttcatcattttcaattcaatatattacactttatatttatgatagtggagaatgcatcaatacttaacaagtg 26756070  T
Q  327 cacttaaaactatttt--tctctctttcatttataca 361  Q
    ||||||||||||||||  |||||| ||||||||||||    
T  26756071 cacttaaaactattttcctctctcattcatttataca 26756107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 349
Target Start/End: Complemental strand, 17724813 - 17724705
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | ||||||||||| |||||| |||| |||  |||||||||||||  |||||||||||||||||||| ||||||| |||||||||||| |||    
T  17724813 aattaatactattttcatcactcccaattcaataaattctactttgcatttatggtagtggagaatgcatcaataattaacaagagcacttaaaacaatt 17724714  T
Q  341 tttctctct 349  Q
    |||||||||    
T  17724713 tttctctct 17724705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 5442349 - 5442471
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  |||||  |||||||||| |||||||| |||||||||||||| |||||||||||||||  |||||||||||| |  ||||||||| |||    
T  5442349 aattaatattactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaatgcactaatacttaacaagataacttaaaaccatt 5442448  T
Q  341 tttctctct--ttcatttataca 361  Q
    |||||||||  ||||||||||||    
T  5442449 tttctctctcattcatttataca 5442471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 8773263 - 8773353
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattttt 343  Q
    |||||||||||| | ||||||||||| |||||||||| ||| | ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  8773263 tttcatcacttctagtttaatatattccactttgcatatatgacagtggagaatgcaccaatacttaacaagagcacttaaaactattttt 8773353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 7785349 - 7785262
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatact--taacaaaagcacttaaaactatttttctctctt 350  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  7785349 caattcaatatatttcactttacatttatgatagtggagaatgcatcaatacttataacaataacacttaaaactatttttctctctt 7785262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 353
Target Start/End: Original strand, 27831867 - 27831967
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttc 352  Q
    |||||||||| |||||| ||||| || |||||||||||||| ||| ||| ||||||| |||||||| ||||  |||||||||||||||||||||||||||    
T  27831867 tttcatcactcccaattcaatatcttccactttgcatttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactatttttctctctttc 27831966  T
Q  353 a 353  Q
    |    
T  27831967 a 27831967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 404
Target Start/End: Complemental strand, 28277125 - 28276969
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactat-----ttttctct 347  Q
    |||||||| || ||||| ||||||||||||||| ||||||| ||| ||||||||||| |||||||||||||  ||||||||||||||     ||||||||    
T  28277125 tttcatcattttcaattcaatatatttcactttacatttatgatactggagaatgcaccaatacttaacaagtgcacttaaaactattttttttttctct 28277026  T
Q  348 ctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    | ||||||||||||        |||  |||||||||||| ||||||||| |||||||    
T  28277025 ccttcatttatacatttttcttaatgcgtgtgaaatgagtttttggctcggttaatc 28276969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 30749960 - 30750048
Alignment:
Q  261 cttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||| |||| |||||||  |||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  30749960 cttcaaattcaatatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactatttttctctct 30750048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 30771411 - 30771499
Alignment:
Q  261 cttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||| |||| |||||||  |||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  30771411 cttcaaattcaatatataccactttgcatttatgatagtagagaatacatcaatatttaacaaaagcacttaaaactatttttctctct 30771499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 32348239 - 32348349
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||||||| |||||| |||||||| |||||||||||| | |||||||| |||  | ||||||||||||| |||||||||||| ||||||||||||  |    
T  32348239 tttcatcactcccaattcaatatattccactttgcatttgtgatagtggaaaatagaccaatacttaacaagagcacttaaaaccatttttctctctcct 32348338  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  32348339 tcatttataca 32348349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 8327712 - 8327848
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  ||||||||||  ||||| |||||||| || ||||||||||| |||| |||||||  | ||||||||||||| ||    
T  8327712 ccctttataactctaattaatactactttcatcactctcaattcaatatattccattttgcatttatgataggggagaatagaccaatacttaacaagag 8327811  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
    ||||||||| |||||||||||||  ||||||||||||    
T  8327812 cacttaaaattatttttctctctcattcatttataca 8327848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 227 - 361
Target Start/End: Complemental strand, 51749296 - 51749160
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  ||||||||||  |||||||||| |||||| |||||||| |||||||||||||| ||| ||||||||  | ||||||||||||| |     
T  51749296 ccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgataatggagaataaaccaatacttaacaagaa 51749197  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
    |||||||||  | ||||||||||  ||||||||||||    
T  51749196 cacttaaaatcagttttctctctccttcatttataca 51749160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 17342861 - 17342945
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||| |||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||| |||||||||| ||||||| ||||    
T  17342861 caattcaatatatttcactttgtatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatttttccctct 17342945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 361
Target Start/End: Original strand, 52432340 - 52432443
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcattta 357  Q
    |||| ||||| ||||||||||||||| |||||||  ||||  |||||||||||||||||||||| |||||||||||  ||||||||||||  ||||||||    
T  52432340 acttacaattcaatatatttcactttacatttatggtagtaaagaatgcatcaatacttaacaagagcacttaaaatcatttttctctcttcttcattta 52432439  T
Q  358 taca 361  Q
    ||||    
T  52432440 taca 52432443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 359
Target Start/End: Original strand, 46496014 - 46496145
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  |||||||| |  |||||||||  | |||| |||||||| |||||||||||||| ||| |||||||| ||||||| |||||||| | |    
T  46496014 cctttataactctaattaatactactttcatcacgcctaattcaatatattccactttgcatttatgataatggagaatacatcaatccttaacaagaac 46496113  T
Q  328 acttaaaactatttttctctctttcatttata 359  Q
    ||| ||||| ||||||||||| ||||||||||    
T  46496114 actcaaaaccatttttctctccttcatttata 46496145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 36784323 - 36784417
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa 335  Q
    |||||||||| ||||||  ||||| |||| ||||||||||||||||||||||| |||||||| ||||||  |||||||||||| ||||| |||||    
T  36784323 aattaatattattttcacaacttcaaattcaatatatttcactttgcatttatgatagtggaaaatgcacaaatacttaacaagagcacctaaaa 36784417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 361
Target Start/End: Original strand, 42926168 - 42926265
Alignment:
Q  266 aatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctc--tctttcatttataca 361  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||| |||||||||  |||||||||  || ||||||||||||    
T  42926168 aattcaatatatttcattttgcatttatgatagtggagaatgcaccgatacttaacaaaaacacttaaaatcatttttctctttcattcatttataca 42926265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 347
Target Start/End: Original strand, 46536361 - 46536455
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctct 347  Q
    ||||||||||   ||||||||||||| ||||||| |||||| |||||||||||| || ||||| ||||||| |||||||||||| ||||||||||    
T  46536361 tttcatcactcttaatttaatatattccactttgtatttatgatagtggagaatacaacaatatttaacaagagcacttaaaaccatttttctct 46536455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 48242700 - 48242567
Alignment:
Q  230 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 329  Q
    ||||||| || ||||||||||  ||| |||| |  ||||| |||||||| |||||| ||||||| ||||||||| ||||||||||||||| |||  ||||    
T  48242700 tttataactttaattaatattacttttatcattctcaattcaatatattccactttacatttatgatagtggaggatgcatcaatacttatcaagtgcac 48242601  T
Q  330 ttaaaactatttt--tctctctttcatttataca 361  Q
    |||||||||||||  || ||| ||||||||||||    
T  48242600 ttaaaactatttttatccctccttcatttataca 48242567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 13500838 - 13500704
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||  |||||||| |  ||||| |||| |||||| ||||| || |||||||||||||| |||||| |||||||| |||||| |||||||||||||    
T  13500838 ttataattctaattaatactactttcagcactcccaattcaatattttccactttgcatttatgatagtgaagaatgcaccaatacataacaaaagcact 13500739  T
Q  331 taaaactatt----tttctctctttcatttataca 361  Q
    |||||  |||    |||||||| ||||||||||||    
T  13500738 taaaatcatttctctttctctcattcatttataca 13500704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 3555631 - 3555551
Alignment:
Q  264 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttc 344  Q
    |||||| |||||||| |||||||||||||| ||||||||||||  | |||||||||| ||||||||||||||| |||||||    
T  3555631 ccaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaaaaaaagcacttaaaaccatttttc 3555551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 281 - 420
Target Start/End: Complemental strand, 10370244 - 10370102
Alignment:
Q  281 actttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt---tctctctttcatttatacannnnnnnnaatatgtg 377  Q
    ||||||||||||| || ||| ||||||||| |||||||||||||||||||||||||||||||   |||||| || |||||||||        ||||| ||    
T  10370244 actttgcatttatgatggtgaagaatgcattaatacttaacaaaagcacttaaaactattttttctctctcctttatttatacatttttcttaatatatg 10370145  T
Q  378 tgaaatgagcttttggctcagttaatctgatacggaaagagta 420  Q
    | |||| | ||||  ||| ||||||||||| ||||||||||||    
T  10370144 taaaataaactttatgctgagttaatctgagacggaaagagta 10370102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 278 - 387
Target Start/End: Original strand, 49944978 - 49945089
Alignment:
Q  278 ttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatg 375  Q
    |||||||||||||||| |||| | ||||||||  |||||||||||| |||||||||||| ||||||||||||  ||||||||||||        ||||||    
T  49944978 ttcactttgcatttatgatagagaagaatgcacaaatacttaacaagagcacttaaaaccatttttctctcttcttcatttatacatttttcttaatatg 49945077  T
Q  376 tgtgaaatgagc 387  Q
    ||||||||||||    
T  49945078 tgtgaaatgagc 49945089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 403
Target Start/End: Original strand, 37525111 - 37525211
Alignment:
Q  303 gaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaa 402  Q
    |||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||||||        ||||  ||||||||||||||||||||| |||||    
T  37525111 gaatgcattaatacttaacaagtgcatttaaaactatttttctctccttcatttatacatttttcttaatacatgtgaaatgagcttttggctctgttaa 37525210  T
Q  403 t 403  Q
    |    
T  37525211 t 37525211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 361
Target Start/End: Complemental strand, 45889322 - 45889224
Alignment:
Q  266 aatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctct---ctttcatttataca 361  Q
    |||| |||||||| |||||||||||||| ||| ||||||||  | ||||| ||||||| |||||||||||| ||||||||||   ||||||||||||||    
T  45889322 aattcaatatattccactttgcatttatgataatggagaatagaccaatagttaacaagagcacttaaaaccatttttctctctcctttcatttataca 45889224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 21304393 - 21304501
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  ||||||||||   |||| ||||||||||||||||||||||| ||||| |||||||||   |||| |||||| | |||||||||  |||    
T  21304393 aattaatattactttcatcactcttaattcaatatatttcactttgcatttatgatagtcgagaatgcactgatacataacaagatcacttaaaatcatt 21304492  T
Q  341 tttctctct 349  Q
    ||| |||||    
T  21304493 tttttctct 21304501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 51848782 - 51848687
Alignment:
Q  252 ttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatca--atacttaacaaaagcacttaaaactatttttct 345  Q
    |||| |||| |||||||| |||||||| ||||||  |||||| |||||||||||| || ||  ||| ||||||| |||||||||||||||||||||    
T  51848782 tttttatcatttccaattcaatatattccactttatatttatgatagtggagaatacaccaatatatttaacaatagcacttaaaactatttttct 51848687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 343
Target Start/End: Complemental strand, 34877189 - 34877087
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||||| |||||||||||  ||||| ||||||||  ||||||||||||| ||| | || ||||||  |||| ||||| | |||||||||||| |||    
T  34877189 aattaatattattttcatcactcacaattcaatatattcaactttgcatttatgataatagaaaatgcacgaatatttaaccagagcacttaaaacaatt 34877090  T
Q  341 ttt 343  Q
    |||    
T  34877089 ttt 34877087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 349
Target Start/End: Original strand, 7787710 - 7787779
Alignment:
Q  280 cactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||| ||||||| |||||||||||| || |||||||||||||  | |||||||||||||| |||||||    
T  7787710 cactttacatttatgatagtggagaatacaccaatacttaacaagtgtacttaaaactatttctctctct 7787779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 349
Target Start/End: Original strand, 16040089 - 16040194
Alignment:
Q  244 taatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattttt 343  Q
    |||||||  ||||| ||||||||||  ||||||||  ||||| ||||||| |||  | |||||| | ||||||||||||||  |||||||||| ||||||    
T  16040089 taatattactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagacacttaaaaccattttt 16040188  T
Q  344 ctctct 349  Q
    ||||||    
T  16040189 ctctct 16040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 3718935 - 3718827
Alignment:
Q  254 ttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct-ttc 352  Q
    |||||||||  ||||| ||||||||  ||||| ||||||| ||| ||   ||||||  ||||||| |||| ||||||||||||||||||||||||| |||    
T  3718935 ttcatcactctcaattcaatatattatactttacatttatgataatgataaatgcacaaatacttgacaagagcacttaaaactatttttctctctcttc 3718836  T
Q  353 atttataca 361  Q
    ||| |||||    
T  3718835 attaataca 3718827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 34813950 - 34814034
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||| ||||||||  ||||||||||||| ||| ||   ||||||  |||||||||||| | |||||||||||||||||||||||    
T  34813950 caattcaatatattctactttgcatttatgataatgataaatgcactaatacttaacaagaacacttaaaactatttttctctct 34814034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 40019768 - 40019876
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  ||||||||||   |||| ||||| ||||||||||  ||||| ||| ||| |||| ||  ||||||| |||| |||||||||||| |||    
T  40019768 aattaatattactttcatcactctgaattcaatatttttcactttgtctttatgataatggtgaatacacaaatacttgacaagagcacttaaaacaatt 40019867  T
Q  341 tttctctct 349  Q
    |||||||||    
T  40019868 tttctctct 40019876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 350
Target Start/End: Original strand, 45305852 - 45305970
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    |||||| || |||||| ||| ||||||||| |  ||||| ||||||||  ||||||||||||| ||| || ||||||||| ||||||| |||| | ||||    
T  45305852 ttataactttaattaaaattattttcatcaatctcaattcaatatattctactttgcatttatgataatgaagaatgcataaatacttgacaaga-cact 45305950  T
Q  331 taaaactatttttctctctt 350  Q
     |||| |||||| |||||||    
T  45305951 caaaattattttcctctctt 45305970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 948686 - 948620
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatg 307  Q
    |||||||| | | ||||||||||  |||| |||||||| |||||||||||||| |||||||||||||    
T  948686 aattaatactatcttcatcactttgaattcaatatattccactttgcatttatgatagtggagaatg 948620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 349
Target Start/End: Complemental strand, 11425978 - 11425860
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    |||||| || |||||||| |  |||||  |||||||||  ||||||||  ||||| ||||||| |||  | |||||| | ||||||||||||||  ||||    
T  11425978 ttataactttaattaatactactttcactacttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaagacact 11425879  T
Q  331 taaaactatttttctctct 349  Q
     ||||||||||||||||||    
T  11425878 caaaactatttttctctct 11425860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 29225495 - 29225386
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttct--ctctt 350  Q
    ||||| ||||||||||| ||||||||  ||||| ||||||| |||    |||||||| |||||||||||||| ||||| ||||  ||||||||  |||||    
T  29225495 tttcaccacttccaattcaatatattctactttccatttatgataaaaaagaatgcaccaatacttaacaaaggcactcaaaatcatttttctcactctt 29225396  T
Q  351 tcatttatac 360  Q
    ||| ||||||    
T  29225395 tcacttatac 29225386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 41968232 - 41968170
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 293  Q
    ||||||||  ||||||||||  |||||||||||| ||||||||| |||||||||||| |||||    
T  41968232 ttataattctaattaatattactttcatcacttctaatttaataaatttcactttgcctttat 41968170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 2571384 - 2571492
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt-tctctcttt 351  Q
    ||||||||||  ||||| ||||||||  ||||||||||||  |||    | |||||| ||||||||||||| | |||| ||||||||||| |||||||||    
T  2571384 tttcatcactctcaattcaatatattctactttgcatttaggataagaaataatgcaccaatacttaacaaga-cactcaaaactattttctctctcttt 2571482  T
Q  352 catttataca 361  Q
    ||||||||||    
T  2571483 catttataca 2571492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 403
Target Start/End: Original strand, 6787288 - 6787420
Alignment:
Q  273 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcatttatacannnnnnnna 370  Q
    |||||| |||||| ||||||| |||||||| |||| |  |||| ||||||||  || |||||||||||||  |||||||||| |||||| |        |    
T  6787288 tatattccactttacatttatgatagtggataatgtactaatatttaacaaatacatttaaaactatttttctctctctttcgtttatatatttttctta 6787387  T
Q  371 atatgtgtgaaatgagcttttggctcagttaat 403  Q
    ||| |||||||||||| || |||||||||||||    
T  6787388 atacgtgtgaaatgagtttctggctcagttaat 6787420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 349
Target Start/End: Original strand, 27391359 - 27391464
Alignment:
Q  244 taatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattttt 343  Q
    |||||||  ||||| || || ||||| |||||||| |||||||||||||| ||| | |  |||| | |||||||||| || |||||||||||  ||||||    
T  27391359 taatattactttcaccattttcaattcaatatattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaatcattttt 27391458  T
Q  344 ctctct 349  Q
    ||||||    
T  27391459 ctctct 27391464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 423
Target Start/End: Original strand, 27698861 - 27698997
Alignment:
Q  289 tttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgag 386  Q
    ||||| |||||||||||||||  |||| ||||||   |||||||||| ||||||| | | |  ||||||||||||        |||| ||||||||||||    
T  27698861 tttatcatagtggagaatgcactaataattaacatgtgcacttaaaattatttttttatttccttcatttatacatttttcttaatacgtgtgaaatgag 27698960  T
Q  387 cttttggctcagttaatctgatacggaaagagtatta 423  Q
    ||||||||||| |||||| || |||||  ||||||||    
T  27698961 cttttggctcaattaatccgagacggagggagtatta 27698997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 422
Target Start/End: Complemental strand, 28706659 - 28706539
Alignment:
Q  304 aatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagtta 401  Q
    ||||||||||||||| ||||| ||||| ||||| ||||||||||||  ||||||||||||        |||||||||||||||  |   |||||||||||    
T  28706659 aatgcatcaatacttgacaaaggcactcaaaaccatttttctctcttattcatttatacattttttttaatatgtgtgaaatggtcaactggctcagtta 28706560  T
Q  402 atctgatacggaaagagtatt 422  Q
    | |||| |||||  |||||||    
T  28706559 aactgagacggagggagtatt 28706539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 361
Target Start/End: Original strand, 46273159 - 46273291
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||| |||||||||| |||||| || |   ||||||||| |||  ||||| ||||||  |||  | ||||||||||||||||| |||||| || |    
T  46273159 ttataattttaattaatattattttcaccattctgaatttaatacattctactttacatttaagataaagaagaatgcatcaatacttgacaaaaacatt 46273258  T
Q  331 taaaactatttttctctct--ttcatttataca 361  Q
     |||| ||||||||| |||  ||||||||||||    
T  46273259 caaaattatttttctatcttattcatttataca 46273291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 348
Target Start/End: Original strand, 4659440 - 4659547
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  ||| |||||| | |||| ||||||||  ||||||| ||| | ||  |||  ||||||  ||||||| |||| ||||||||||||||||    
T  4659440 aattaatattacttttatcactcctaattcaatatattctactttgcgtttgtgattatggtaaatgcaaaaatacttcacaagagcacttaaaactatt 4659539  T
Q  341 tttctctc 348  Q
    ||||||||    
T  4659540 tttctctc 4659547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 17342774 - 17342813
Alignment:
Q  174 aaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  17342774 aaaataactgagttatttcacttttcaatacaatattaat 17342813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 340
Target Start/End: Complemental strand, 30903326 - 30903228
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||||| ||||||||||| |   || ||||||||  ||||||||||||| ||| |||| ||||||  |||||||||||| | |||| |||||||||    
T  30903326 aattaatattattttcatcactcctgtttcaatatattctactttgcatttatgataatggaaaatgcacaaatacttaacaaga-cactcaaaactatt 30903228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 46880448 - 46880546
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttataca 361  Q
    ||||||||||||||  ||||| ||||||| |||||||||||  || | |||||||| || ||| || ||||  ||||||||||||  ||||||||||||    
T  46880448 caatttaatatattcaactttacatttatgatagtggagaagacaccgatacttaataagagctctcaaaatcatttttctctctccttcatttataca 46880546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 914756 - 914834
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactta 319  Q
    ||||||||||  |||||||| |  ||||| ||||| || ||||||| |||||||||| | | |||||||||||||||||    
T  914756 aattaatattaatttcatcattctcaattcaatatcttccactttgtatttataatattcgtgaatgcatcaatactta 914834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 21304842 - 21304784
Alignment:
Q  304 aatgcatcaatacttaacaaaagcacttaaaactatttt-tctctctttcatttataca 361  Q
    ||||||||||||||| |||||  |||| ||||| ||||| |||||||||||||||||||    
T  21304842 aatgcatcaatacttgacaaagacactcaaaacaattttatctctctttcatttataca 21304784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 26040739 - 26040800
Alignment:
Q  302 agaatgcatcaatacttaacaaaagcacttaaaactatttttct--ctctttcatttataca 361  Q
    |||||||| |||||||| |||||| |||| ||||| ||||||||  ||||||||||||||||    
T  26040739 agaatgcaccaatacttgacaaaaacactcaaaaccatttttctaactctttcatttataca 26040800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 28908150 - 28908204
Alignment:
Q  295 atagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||||||||||||  |||||||||||| || ||||||||  ||||||||||||    
T  28908150 atagtggagaatgcactaatacttaacaagagtacttaaaatcatttttctctct 28908204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 34877253 - 34877212
Alignment:
Q  172 ctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  34877253 ctaaaataactgaatcattttacttttcaatacaatattaat 34877212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 346
Target Start/End: Original strand, 48391756 - 48391861
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  ||||||||||   |||| ||||||||||||||| ||||| | ||  || ||||||||  ||||  |||||||| |||||||  |||||    
T  48391756 aattaatattactttcatcactcataattcaatatatttcactttacatttgtgatgatgaagaatgcacaaatatataacaaaaacacttaagcctatt 48391855  T
Q  341 tttctc 346  Q
    ||||||    
T  48391856 tttctc 48391861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 52382485 - 52382408
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt 318  Q
    ||||||||||  ||||| ||||  ||||| ||||||||| ||||| ||||||| |||  | |||||||||||||||||    
T  52382485 aattaatattactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgcatcaatactt 52382408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 4466241 - 4466145
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||| ||||||||||  ||||||||  ||||| ||||||| |||  | |||||| | |||||||||||||| | ||| ||| | ||||||||||||    
T  4466241 tttcaccacttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaaggtactcaaacccatttttctctct 4466145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 11426036 - 11425992
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||    
T  11426036 gtcctaaaataactgagtcatttcactttccaatacaatattaat 11425992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 26583737 - 26583845
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | ||||||||||| |||||| ||||||||  | ||||||||||| |||  | |||||||| ||||| || | ||| ||||| |||   |||    
T  26583737 aattaataatattttcatcactcccaattcaatatattctattttgcatttatgataaagaagaatgcaccaatagttgataaaggcactcaaactcatt 26583836  T
Q  341 tttctctct 349  Q
    |||||||||    
T  26583837 tttctctct 26583845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 27698753 - 27698797
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||| ||| |  |||||||||||||||||||||||||    
T  27698753 gtcctaaaataattgagtcatttcacttttcaatacaatattaat 27698797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 37541200 - 37541104
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||| ||||||||||| ||||||||  ||||| |||||||||||  | |||||||| ||||| || | |||  || | ||||| ||||||||||||    
T  37541200 tttcaccacttccaattcaatatattctactttacatttataataaagaagaatgcaccaatagttgataaagacattcaaaaccatttttctctct 37541104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 38664422 - 38664518
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||||| | | |||| ||||||||  | ||||||||||| ||||| ||||||||| |  |||||||||||| || | ||| || |||||||||||    
T  38664422 tttcatcattcctaattcaatatattcaattttgcatttatgatagtagagaatgcaccggtacttaacaaaaacattaaaacctttttttctctct 38664518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 47480023 - 47479955
Alignment:
Q  281 actttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||||||||| ||| |||  ||| ||| ||||||| ||||||| | ||||||| ||||||||||||    
T  47480023 actttgcatttatgataatggtaaatacattaatacttgacaaaagtatttaaaaccatttttctctct 47479955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 4e-39; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 227 - 402
Target Start/End: Complemental strand, 5962585 - 5962408
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  ||||||||||  |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  5962585 ccctttataactctaattaatattaatttcatcactcccaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaag 5962486  T
Q  327 cacttaaaactatttttc--tctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaa 402  Q
    ||||||||||  ||||||  |||| ||||||||||||        |||||||||||||| | ||||||||||| ||||    
T  5962485 cacttaaaacgttttttctatctccttcatttatacattttccttaatatgtgtgaaataaacttttggctcaattaa 5962408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 12653697 - 12653863
Alignment:
Q  242 attaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattt 341  Q
    |||||||||  |||||||| |  ||||| |||||||| |||||| |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||    
T  12653697 attaatattactttcatcattctcaattcaatatattccactttacatttataatagtggataatgcaccaatatttaacaaacgcacttaaaactattt 12653796  T
Q  342 ttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
    ||||||||  ||||||||||||        |||| ||||||||||||||||||||||||||||||||    
T  12653797 ttctctctacttcatttatacatttttcttaatacgtgtgaaatgagcttttggctcagttaatctg 12653863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 174 - 404
Target Start/End: Original strand, 5391994 - 5392223
Alignment:
Q  174 aaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatttaat 273  Q
    ||||||||||| |  |||||||||||||||||||||||||  |||        |||||||||| |  |||||||| |  ||||| |||| |||||| |||    
T  5391994 aaaataactgagtcatttcacttttcaatacaatattaat--tacttttttt-ccctttataactctaattaatactactttcaacactcccaattcaat 5392090  T
Q  274 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnnnnnaa 371  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||  ||||||||||||        ||    
T  5392091 atattccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcacttaaaaccatttttctctctccttcatttatacatttgtcttaa 5392190  T
Q  372 tatgtgtgaaatgagcttttggctcagttaatc 404  Q
    || |||||||||||||   ||||||||||||||    
T  5392191 taggtgtgaaatgagcaaatggctcagttaatc 5392223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 253 - 423
Target Start/End: Complemental strand, 38252524 - 38252351
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt---tctctct 349  Q
    |||||||| |||||||| |||||||| |||||| ||||||| | |||||||||||||  ||||||||||||  |||||||||||||||||   ||||||     
T  38252524 tttcatcatttccaattcaatatattccactttacatttatgacagtggagaatgcactaatacttaacaagtgcacttaaaactattttttctctctcc 38252425  T
Q  350 ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctgatacggaaagagtatta 423  Q
    ||||||||||||        |||| ||||||||||||||||||||||||||||||||  |||||  ||||||||    
T  38252424 ttcatttatacatttttcttaatacgtgtgaaatgagcttttggctcagttaatctgggacggagggagtatta 38252351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 28802762 - 28802898
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| | |||||||||||  ||||| |||||||| |||||||||||||| ||||||||||||  ||||||||||||||| ||    
T  28802762 ccctttataactctaattaataatattttcatcactctcaattcaatatattccactttgcatttatgatagtggagaatagatcaatacttaacaagag 28802861  T
Q  327 cacttaaaactatttt--tctctctttcatttataca 361  Q
    |||||||||| |||||  |||||||||||||||||||    
T  28802862 cacttaaaaccatttttctctctctttcatttataca 28802898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 45425494 - 45425616
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  |||||||| | | ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| |||    
T  45425494 aattaatattactttcatcattcctaatttaatatattccactttgcatttatgatagtggaaaatgcatcaatacttaacaagagcacttaaaaccatt 45425593  T
Q  341 tttctctct--ttcatttataca 361  Q
    | |||||||  ||||||||||||    
T  45425594 tgtctctctccttcatttataca 45425616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 241 - 359
Target Start/End: Original strand, 39171552 - 39171672
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | |||||||||||  ||||| |||||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||| |||    
T  39171552 aattaatactattttcatcactcacaattcaatatattccactttgcatttatgatagtagataatgcatcaatacttaacaaaagtacttaaaaccatt 39171651  T
Q  341 tttctctct--ttcatttata 359  Q
    |||||||||  ||||||||||    
T  39171652 tttctctctccttcatttata 39171672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 170 - 361
Target Start/End: Complemental strand, 32241589 - 32241400
Alignment:
Q  170 tcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatt 269  Q
    ||||||||||| ||| || |||||||||||||||||||||||||  |||        |||||||||| |  ||||||||||  |||||  ||||||||||    
T  32241589 tcctaaaataaatgagttatttcacttttcaatacaatattaat--tactttttt--ccctttataactctaattaatattactttcacaacttccaatt 32241494  T
Q  270 taatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcatttataca 361  Q
     | |||||| |||||||||||||| |||||| |||||||||||||||||||||| | |||||||||  |||||  |||||| ||||||||||||    
T  32241493 cattatattccactttgcatttatgatagtgaagaatgcatcaatacttaacaagaacacttaaaatcatttttatctctccttcatttataca 32241400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 361
Target Start/End: Complemental strand, 44790534 - 44790398
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  ||||| || | |||||| |||||||| |||||| ||||||| ||||||||||||||| |||||||||||||  |    
T  44790534 ccctttataactctaattaatactactttcaccattcccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtg 44790435  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
    |||||||||||||||||||||||  ||||||||||||    
T  44790434 cacttaaaactatttttctctctccttcatttataca 44790398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 404
Target Start/End: Original strand, 2349359 - 2349525
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  ||||| || |||||||| |||||||| || ||| ||||||| |||||||||||||||  ||||||||||||| |||||||||||||||    
T  2349359 aattaatattactttcaacatttccaattcaatatattccaatttacatttatgatagtggagaatgcacaaatacttaacaaatgcacttaaaactatt 2349458  T
Q  341 tt---tctctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    ||   |||||| ||||||||||||        ||||  ||||||||||| ||||| |||||||||||    
T  2349459 ttttctctctccttcatttatacattttttttaatacatgtgaaatgagtttttgactcagttaatc 2349525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 274 - 350
Target Start/End: Original strand, 9014745 - 9014821
Alignment:
Q  274 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctt 350  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  9014745 atattccactttgcatttatgatagtggagaatgcatcaatacttaacaaaagcacttaaaatcatttttctctctt 9014821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 228 - 405
Target Start/End: Complemental strand, 32967388 - 32967209
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  |||||||| |  |||||||| |  ||||| |||||||| ||||||  |||||| ||||||||||||| | |||||||||| ||  ||    
T  32967388 cctttataactctaattaatactactttcatcattctcaattcaatatattccactttaaatttatgatagtggagaatggaccaatacttaagaagtgc 32967289  T
Q  328 acttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatct 405  Q
    ||||||||||||||||||||||  ||||||||||||        |||| |||||||||||||||||||||| ||||||||    
T  32967288 acttaaaactatttttctctcttcttcatttatacattttacttaatacgtgtgaaatgagcttttggctcggttaatct 32967209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 230 - 349
Target Start/End: Original strand, 34133125 - 34133244
Alignment:
Q  230 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 329  Q
    ||||||| | |||||||||||  ||||||||  ||||||| ||||||||||| ||| ||||||| ||||||||||||||  |||||||||||||  ||||    
T  34133125 tttataactccaattaatattactttcatcatatccaattcaatatatttcattttacatttatgatagtggagaatgcgccaatacttaacaagtgcac 34133224  T
Q  330 ttaaaactatttttctctct 349  Q
    |||||| |||||||||||||    
T  34133225 ttaaaattatttttctctct 34133244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 387
Target Start/End: Complemental strand, 42412469 - 42412333
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||||||| |||||| |||||||| |||||||||||||| ||| ||||||||||| |||||  | |||| |||||||||||||||||||||||||  |    
T  42412469 tttcatcactcccaattcaatatattccactttgcatttatgataatggagaatgcaccaatatatgacaagagcacttaaaactatttttctctctcat 42412370  T
Q  351 tcatttatacannnnnnnnaatatgtgtgaaatgagc 387  Q
    ||| |||||||        ||||||||||||||||||    
T  42412369 tcacttatacatttttcttaatatgtgtgaaatgagc 42412333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 44615477 - 44615368
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||||| |||||||||||  ||||| ||||||||  |||||||||||||||||||||||||| || |||||||||||||||     
T  44615477 ccctttataactctaattaatattattttcatcactctcaattcaatatattctactttgcatttataatagtggagaattcaccaatacttaacaaaaa 44615378  T
Q  327 cacttaaaac 336  Q
    ||||| ||||    
T  44615377 cacttcaaac 44615368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 21587298 - 21587403
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttc 352  Q
    |||||||||| |||||| |||||||| |||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||   || |||||| |||    
T  21587298 tttcatcactcccaattcaatatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaac--cttctctctccttc 21587395  T
Q  353 atttatac 360  Q
    ||||||||    
T  21587396 atttatac 21587403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 404
Target Start/End: Original strand, 29615793 - 29615972
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| || |||||||| |  |||||||| | |||||| |||||||| |||||| ||||||| | |||||| | | || |||||||||||||  |    
T  29615793 ccctttataactttaattaatactactttcatcattcccaattcaatatattccactttacatttatgacagtggaaagtacaccaatacttaacaagtg 29615892  T
Q  327 cacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    || |||||| |||||||||||||  ||||||||||||        |||| |||||||||||||||||| |||||||||||    
T  29615893 catttaaaattatttttctctctccttcatttatacatttttcttaatacgtgtgaaatgagcttttgactcagttaatc 29615972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 361
Target Start/End: Complemental strand, 33190988 - 33190885
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcattta 357  Q
    |||||||||| |||||||| |||| ||||||||| |||||||||||||||| |||||||||||| | |||||||||  ||||||||||||  ||||||||    
T  33190988 acttccaattcaatatattccactatgcatttatgatagtggagaatgcattaatacttaacaagaacacttaaaatcatttttctctcttcttcattta 33190889  T
Q  358 taca 361  Q
    ||||    
T  33190888 taca 33190885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 241 - 361
Target Start/End: Complemental strand, 4274397 - 4274275
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||||| |||||| ||||  ||||| ||||||||||||||||||||||| |||| |||||||  | | ||| ||||| ||||||||||||| ||||    
T  4274397 aattaatattattttcaccactctcaattcaatatatttcactttgcatttatgataggggagaatagaccgatatttaacgaaagcacttaaaattatt 4274298  T
Q  341 tttctctct--ttcatttataca 361  Q
    |||||||||  ||||||||||||    
T  4274297 tttctctcttcttcatttataca 4274275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 405
Target Start/End: Complemental strand, 31410681 - 31410540
Alignment:
Q  266 aatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacann 363  Q
    |||| |||||||| |||||||||||||| |||||| | |||||| ||||| ||||||||| ||||||||||| |||||||||||  |||||||||  |      
T  31410681 aattcaatatattccactttgcatttatgatagtgtataatgcaccaatatttaacaaaaacacttaaaactgtttttctctctccttcatttattaatt 31410582  T
Q  364 nnnnnnaatatgtgtgaaatgagcttttggctcagttaatct 405  Q
          |||||||||||||||| ||||||| |||||||||||    
T  31410581 tttcttaatatgtgtgaaatgaacttttggttcagttaatct 31410540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 359
Target Start/End: Original strand, 45197632 - 45197739
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa-ctatttttctctcttt 351  Q
    ||||||||||  ||||| ||||||||||| ||| ||||||| | |||| |||||||||||||||||||||||| ||||||||| |  |||||||||| ||    
T  45197632 tttcatcactctcaattcaatatatttcattttacatttatgacagtgaagaatgcatcaatacttaacaaaaacacttaaaatcattttttctctcatt 45197731  T
Q  352 catttata 359  Q
    ||||||||    
T  45197732 catttata 45197739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 252 - 359
Target Start/End: Complemental strand, 29730985 - 29730874
Alignment:
Q  252 ttttcatcacttccaatttaatatat-ttc-actttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||| | |||||||| ||||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||| | ||||||||||    
T  29730985 ttttcatgagttccaattcaatatatattctactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaaccacttttctctct 29730886  T
Q  350 --ttcatttata 359  Q
      ||||||||||    
T  29730885 ccttcatttata 29730874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 42558667 - 42558559
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttc 352  Q
    ||||||||||   |||| |||||||| |||||||||||||| ||||||||||||  | ||||||||||||| | || ||||||| |||| |||||| |||    
T  42558667 tttcatcactcttaattcaatatattccactttgcatttatgatagtggagaataaaccaatacttaacaagaacaattaaaaccatttatctctccttc 42558568  T
Q  353 atttataca 361  Q
    |||||||||    
T  42558567 atttataca 42558559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 347
Target Start/End: Original strand, 7042761 - 7042868
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt-aacaaaagcacttaaaactat 339  Q
    |||||||| | ||||||||||||||||||| ||||||| |||||| ||||||| ||| | ||||||||| |||||||| ||||| ||||||||||   ||    
T  7042761 aattaatactattttcatcacttccaattttatatattccactttacatttatgataatagagaatgcaccaatacttaaacaagagcacttaaattcat 7042860  T
Q  340 ttttctct 347  Q
    ||||||||    
T  7042861 ttttctct 7042868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 404
Target Start/End: Complemental strand, 22325042 - 22324888
Alignment:
Q  252 ttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct-- 349  Q
    ||||||||| || ||||| |||||||| |||||| ||||||| |||||||| ||||||  |||| |||||||   ||||||||| |||||||||||||      
T  22325042 ttttcatcattttcaattcaatatattccactttacatttatgatagtggaaaatgcactaatatttaacaagtacacttaaaattatttttctctctcc 22324943  T
Q  350 ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    ||||||||||||        ||||  ||||||||||||||||| ||| |||||||    
T  22324942 ttcatttatacatttttcttaatacttgtgaaatgagcttttgactcggttaatc 22324888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 13085015 - 13084938
Alignment:
Q  272 atatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||| |||||||||||||| || || ||||||||| ||||| ||||||| | ||||||||||||||||| |||||    
T  13085015 atatattccactttgcatttatgattgtagagaatgcaccaataattaacaagaacacttaaaactatttttgtctct 13084938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 138785 - 138677
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttc 352  Q
    |||||||| | | |||| |||||||| |||||||||||||| ||||  || ||| || |||||| |||||||| |||||||||  ||||||||||  |||    
T  138785 tttcatcattactaattcaatatattccactttgcatttatgatagaagaaaatccaccaatacataacaaaaacacttaaaatcatttttctcttcttc 138686  T
Q  353 atttataca 361  Q
    |||||||||    
T  138685 atttataca 138677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 2195489 - 2195584
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||||||| |||||| ||||||||  ||||||||||||| |||    |||||||| ||||||||||||| | |||| ||||||||||||||||||    
T  2195489 tttcatcactcccaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaaga-cactcaaaactatttttctctct 2195584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 349
Target Start/End: Original strand, 3384546 - 3384651
Alignment:
Q  244 taatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattttt 343  Q
    |||||||  ||||||||||| ||||| ||||||||  ||||||||||||| |||||| |||||  | |||||| |||||| || | |||| || ||||||    
T  3384546 taatattactttcatcactttcaattcaatatattcaactttgcatttatgatagtgaagaatataccaatacataacaagagtatttaataccattttt 3384645  T
Q  344 ctctct 349  Q
    ||||||    
T  3384646 ctctct 3384651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 41726553 - 41726650
Alignment:
Q  264 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttcatttataca 361  Q
    |||||| ||||||||  ||||| ||||||| |||  | |||||||| |||||||| | ||| ||||| |||||||| |||||||||||| ||||||||    
T  41726553 ccaattcaatatattctactttacatttatgataaagaagaatgcaacaatacttgaaaaaggcactcaaaactatatttctctctttcttttataca 41726650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 386
Target Start/End: Original strand, 139063 - 139178
Alignment:
Q  273 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcatttatacannnnnnnna 370  Q
    |||||| |||||||||||||| |||| ||| |||||| ||||||||||||| || | ||||||  |||||  |||||| ||||||||||||        |    
T  139063 tatattccactttgcatttatgatagcggaaaatgcaccaatacttaacaagagaatttaaaatcatttttatctctcattcatttatacatttttctta 139162  T
Q  371 atatgtgtgaaatgag 386  Q
    ||||||||||||||||    
T  139163 atatgtgtgaaatgag 139178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 9734253 - 9734145
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttc 352  Q
    |||||||||  | |||||||||||||| ||||||||||||| |||  | |||||||| ||||| || | || |  ||| ||| | |||||||||||||||    
T  9734253 tttcatcacccctaatttaatatattttactttgcatttatgataaagaagaatgcaccaatagttgataagaatactcaaatccatttttctctctttc 9734154  T
Q  353 atttataca 361  Q
    |||||||||    
T  9734153 atttataca 9734145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 347
Target Start/End: Original strand, 31132758 - 31132845
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctct 347  Q
    |||| ||||| | |||||| || ||||||||||| ||| ||||||||  | ||||||||||||| |||||||||||  ||||||||||    
T  31132758 actttcaattgattatattccattttgcatttatgatactggagaatataccaatacttaacaagagcacttaaaatcatttttctct 31132845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 347
Target Start/End: Complemental strand, 7258453 - 7258359
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctct 347  Q
    |||||||||| |||||| ||||||||  | ||||||||||| ||| ||   |||||| |||||||| |||| ||| |||||||| ||||||||||    
T  7258453 tttcatcactcccaattcaatatattctagtttgcatttatgataatgataaatgcaccaatacttgacaagagcgcttaaaaccatttttctct 7258359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 350
Target Start/End: Complemental strand, 26570211 - 26570141
Alignment:
Q  280 cactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctt 350  Q
    |||||||||||||| ||| ||  |||||||||||||||| |||||| |||| |||| ||||| ||||||||    
T  26570211 cactttgcatttatgataatgacgaatgcatcaatacttgacaaaatcactcaaaattatttctctctctt 26570141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 336
Target Start/End: Original strand, 8618127 - 8618232
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    |||||| || |||||||| | |||| | ||||||||||| ||||||||  | ||| ||||||| |||  | | |||||| ||||||||||||||| ||||    
T  8618127 ttataactttaattaatactatttttaccacttccaattcaatatattatattttacatttatgataaagaataatgcaccaatacttaacaaaaacact 8618226  T
Q  331 taaaac 336  Q
    ||||||    
T  8618227 taaaac 8618232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 886652 - 886700
Alignment:
Q  275 tatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 323  Q
    ||||||||| ||||||||||| |||||||||||||  ||||||||||||    
T  886652 tatttcactctgcatttataacagtggagaatgcacaaatacttaacaa 886700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 319
Target Start/End: Complemental strand, 1230470 - 1230383
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactta 319  Q
    |||||| || |||||||||| ||| |||||||  ||||| ||||||||  ||||||||||||| ||| |||| |||||| |||||||||    
T  1230470 ttataactttaattaatattatttccatcactctcaattcaatatattctactttgcatttatgataatgga-aatgcaccaatactta 1230383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 4480528 - 4480446
Alignment:
Q  280 cactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcatttataca 361  Q
    |||||||  ||||| ||| ||||||||||| |||||| ||||||||| | |||||| ||||||  |||||||||||||||||||    
T  4480528 cactttgtgtttatgatactggagaatgcaccaatacataacaaaagtatttaaaa-tatttttctctctctttcatttataca 4480446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 351
Target Start/End: Original strand, 2119712 - 2119835
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  ||||||| || ||||||  ||||| |||| | |||||| |||||| ||||||| ||| || |||||| | |||||  |||||  | |    
T  2119712 cctttataactctaattaatcttattttcacaacttctaattcagtatattccactttacatttatgataatgaagaatgtaccaatatataacaggaac 2119811  T
Q  328 acttaaaactatttttctctcttt 351  Q
    |||||||| |||||||||||||||    
T  2119812 acttaaaattatttttctctcttt 2119835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 361
Target Start/End: Complemental strand, 10729004 - 10728897
Alignment:
Q  257 atcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacta----tttttctctctttc 352  Q
    |||||| |||||| |||||||| |||||||||||||| |||    ||||||||  |||||||||||| | |||| |||||||    ||||||||||||||    
T  10729004 atcactcccaattcaatatattccactttgcatttatgataagaaagaatgcacaaatacttaacaaga-cactcaaaactatttttttttctctctttc 10728906  T
Q  353 atttataca 361  Q
    | |||||||    
T  10728905 acttataca 10728897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 346
Target Start/End: Complemental strand, 27868433 - 27868318
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||| |||||||| |  |||||||| |  ||||| ||||||||  ||||||||||||| ||| ||   |||| |||||||||| |||| | |||     
T  27868433 ttataattttaattaatactactttcatcattctcaattcaatatattctactttgcatttatgataatgataaatggatcaatacttgacaagaacacg 27868334  T
Q  331 taaaactatttttctc 346  Q
    |||||| |||||||||    
T  27868333 taaaaccatttttctc 27868318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 33826177 - 33826220
Alignment:
Q  170 tcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    ||||||||||| ||| || |||||||||||||||||||||||||    
T  33826177 tcctaaaataattgacttatttcacttttcaatacaatattaat 33826220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 37219843 - 37219780
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaa 323  Q
    |||| |||||||||||||||||||||  |||||| |||  |||||||||| | |||||||||||    
T  37219843 actttcaatttaatatatttcactttatatttatgataagggagaatgcacccatacttaacaa 37219780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 12958049 - 12957975
Alignment:
Q  271 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttct 345  Q
    |||||||| ||||||| |||||| ||||| |||||||||  ||||  ||| || |||||||||||| ||||||||    
T  12958049 aatatattccactttgtatttatgatagttgagaatgcactaatagataataagagcacttaaaaccatttttct 12957975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 27973761 - 27973679
Alignment:
Q  264 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctc 346  Q
    |||||| ||| ||||  ||||||||||||| ||| |||  |||| |||||||||| |||| | |||||||||| |||||||||    
T  27973761 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctc 27973679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 28031030 - 28030948
Alignment:
Q  264 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctc 346  Q
    |||||| ||| ||||  ||||||||||||| ||| |||  |||| |||||||||| |||| | |||||||||| |||||||||    
T  28031030 ccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttttctc 28030948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 28791340 - 28791425
Alignment:
Q  264 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||| ||||||||  | ||| ||||||| |||  | |||||||| |||||||| | ||| ||||| ||||||||||||||||||    
T  28791340 ccaattcaatatattctagtttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctct 28791425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 361
Target Start/End: Original strand, 29451448 - 29451477
Alignment:
Q  332 aaaactatttttctctctttcatttataca 361  Q
    ||||||||||||||||||||||||||||||    
T  29451448 aaaactatttttctctctttcatttataca 29451477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 152
Target Start/End: Complemental strand, 44790638 - 44790605
Alignment:
Q  119 caaatacttcctccgtcccataataactgagcta 152  Q
    |||||||| |||||||||||||||||||||||||    
T  44790638 caaatactccctccgtcccataataactgagcta 44790605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 15559216 - 15559120
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||||||| | |||| ||||||||  ||||||||||||| ||| |||  ||| || |||||||| |||| | |||||||||  |||||| |||||    
T  15559216 tttcatcactcctaattcaatatattctactttgcatttatgataatggtaaatacaccaatacttgacaagaacacttaaaatcatttttgtctct 15559120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 26570321 - 26570281
Alignment:
Q  173 taaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||| |  |||||||||||||||||||||||||    
T  26570321 taaaataactgattcatttcacttttcaatacaatattaat 26570281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 29731030 - 29730990
Alignment:
Q  173 taaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||| |  |||||||||||||||||||||||||    
T  29731030 taaaataactgagtcatttcacttttcaatacaatattaat 29730990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 33191075 - 33191031
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  33191075 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 33191031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 34287190 - 34287126
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcattta 292  Q
    |||||||||||  ||||||||||  |||||||| ||| |||| |||||||| |||||| ||||||    
T  34287190 cctttataattctaattaatattactttcatcatttctaattcaatatattccactttacattta 34287126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 405
Target Start/End: Complemental strand, 29434692 - 29434513
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  |||||||| |  ||||| |||||||| |||||||||||||| | |||||||||| || ||||||||||||||||    
T  29434692 ccctttataactctaattaatactactttcatcattcacaattcaatatattccactttgcatttatgaaagtggagaatccaccaatacttaacaaaag 29434593  T
Q  327 cacttaaaactatttttctctct-ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatct 405  Q
    ||||||||||||||||||||||| |||||||| | |        ||||||||||||||||||||||||||||||||||||    
T  29434592 cacttaaaactatttttctctctcttcatttaaaaaattttcttaatatgtgtgaaatgagcttttggctcagttaatct 29434513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 27234503 - 27234633
Alignment:
Q  232 tataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcactt 331  Q
    ||||| || |||||||| | |||||||||||  ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  27234503 tataactttaattaatactattttcatcactcacaatttaatatatttcgttttgcatttatgatagtggagaatgcatcaatacttaacaaaaacactt 27234602  T
Q  332 aaaactatttt-tctctctttcatttataca 361  Q
    ||||| ||||| ||| || ||||||||||||    
T  27234603 aaaacaattttctctgtcattcatttataca 27234633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 253 - 406
Target Start/End: Complemental strand, 5724793 - 5724639
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||| ||| ||| |||| ||||||||||||||| ||||||| |||||||||||||||  |||||||||| || ||||||||||||||||||||||||  |    
T  5724793 tttcttcatttctaattcaatatatttcactttacatttatgatagtggagaatgcactaatacttaac-aaggcacttaaaactatttttctctctcct 5724695  T
Q  351 tcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
    |||||||||||        |||| ||||||||||| ||||||||||||||||||||    
T  5724694 tcatttatacatttttcttaatacgtgtgaaatgaacttttggctcagttaatctg 5724639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 17266036 - 17266145
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||||| ||||||||||| ||||||  |||||||||||||||||||||| |||||| |||||||| |||||||||| |||| ||||| |||| |||    
T  17266036 aattaatattattttcatcactcccaattcgatatatttcactttgcatttatgatagtgaagaatgcaccaatacttaataaaaacactttaaaccatt 17266135  T
Q  341 tttctctctt 350  Q
    ||||||||||    
T  17266136 tttctctctt 17266145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 227 - 361
Target Start/End: Complemental strand, 37490730 - 37490594
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    ||||||||||||  ||||||||||  ||| ||||||  ||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||     
T  37490730 ccctttataattctaattaatattacttttatcactatcaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaaaaaaa 37490631  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
    |||||||||  ||||||||||||  ||||||||||||    
T  37490630 cacttaaaatcatttttctctctccttcatttataca 37490594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 241 - 402
Target Start/End: Original strand, 30463025 - 30463188
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  |||||||| || ||||| |||||||| || ||| ||||||| || |||||||||||| |||||||||||||  |||||||||||||||    
T  30463025 aattaatattactttcatcattttcaattcaatatattccattttacatttatgattgtggagaatgcaccaatacttaacaagtgcacttaaaactatt 30463124  T
Q  341 tttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaa 402  Q
    |||||||||  ||||||||||||        |||| | ||||||||||||||||||||| ||||    
T  30463125 tttctctctcattcatttatacatttttcttaatacgcgtgaaatgagcttttggctcaattaa 30463188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 2846762 - 2846652
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||||| |||||||| |||||||| ||||||| |||||| ||||||||||||  | ||||||||||||| |||||||||||||||||||||||||  |    
T  2846762 tttcatcaattccaattcaatatattccactttgaatttatgatagtggagaatagaccaatacttaacaagagcacttaaaactatttttctctctcgt 2846663  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  2846662 tcatttataca 2846652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 2842161 - 2842028
Alignment:
Q  230 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 329  Q
    |||||||||  |||||||| |  ||||||||||   |||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||| | |||    
T  2842161 tttataattataattaatactactttcatcactctaaattcaatatatttcactttgcatttatgatagtggagaatgcatcaatacttgacaataacac 2842062  T
Q  330 ttaaaactatttttctctct--ttcatttataca 361  Q
    |||| || ||||||||||||  ||||||||||||    
T  2842061 ttaacaccatttttctctctccttcatttataca 2842028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 403
Target Start/End: Complemental strand, 49100613 - 49100437
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| || |||||||  | |||| |||| |||||||| |||||||| |||||| ||||||| ||||||||||||  | |||||||||||||  ||    
T  49100613 cctttataactttaattaattctatttttatcatttccaattcaatatattccactttacatttatgatagtggagaataaaccaatacttaacaagtgc 49100514  T
Q  328 acttaaaactatttttctc--tctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaat 403  Q
    |||| ||||||||||||||  |||||||||||||||        |||| ||||||||||||||||| |||||||||||    
T  49100513 actt-aaactatttttctctgtctttcatttatacatttttcttaatacgtgtgaaatgagcttttagctcagttaat 49100437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 359
Target Start/End: Original strand, 18235199 - 18235319
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacta-- 338  Q
    |||||||||| ||||||||| ||||||||| ||||||| |||||| ||||||| ||||||||||||||| |||||||||||||  ||| |||||| ||      
T  18235199 aattaatattattttcatcatttccaatttcatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcatttaaaattatt 18235298  T
Q  339 tttttctctctttcatttata 359  Q
    |||||||||| ||||||||||    
T  18235299 tttttctctccttcatttata 18235319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 33584558 - 33584694
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  |||||||||| |||||| |||||||| || ||||||||||| ||| |||||||| || ||||||||||||| ||    
T  33584558 ccctttataactataattaatactactttcatcactcccaattcaatatattccattttgcatttatgatactggagaatacaccaatacttaacaatag 33584657  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
    |||||||||| ||||||||||||  ||||||||||||    
T  33584658 cacttaaaaccatttttctctctccttcatttataca 33584694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 28923338 - 28923207
Alignment:
Q  230 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcac 329  Q
    |||||||||  |||||||||   ||||||||||  ||||||| ||| || |||||||||||||||||| ||| ||||||| |||||||| |||||| |||    
T  28923338 tttataattataattaatatcactttcatcactctcaatttattatcttccactttgcatttataataatggtgaatgcaccaatacttgacaaaatcac 28923239  T
Q  330 ttaaaactatttttctctctttcatttataca 361  Q
    |||||||||  |||||||| ||||||||||||    
T  28923238 ttaaaactacatttctctcattcatttataca 28923207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 253 - 404
Target Start/End: Original strand, 11616582 - 11616735
Alignment:
Q  253 tttcatcacttccaatttaat-atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct-- 349  Q
    ||||| |||| |||||| ||| ||||| |||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||      
T  11616582 tttcaccactcccaattcaattatattccactttgcatatatgatagtggagaatgcaccaatacttaacaagagcacttaaaaccatttttctctctcc 11616681  T
Q  350 ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    ||||||||||||        ||||||||||||||||||   ||||||||||||||    
T  11616682 ttcatttataca-tttttttaatatgtgtgaaatgagcaaatggctcagttaatc 11616735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 253 - 392
Target Start/End: Original strand, 47454025 - 47454166
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctt 350  Q
    |||||||| || ||| | ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||  |||||||||||||||||  |||||| |    
T  47454025 tttcatcatttacaaatcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactattttactctctcct 47454124  T
Q  351 tcatttatacannnnnnnnaatatgtgtgaaatgagcttttg 392  Q
    ||||||||| |        |||| ||||||||||||||||||    
T  47454125 tcatttatatatttttcttaatacgtgtgaaatgagcttttg 47454166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 260 - 361
Target Start/End: Complemental strand, 7425957 - 7425853
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt-aacaaaagcacttaaaactatttttctctct--ttcattt 356  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||| ||||| | |||||||||| ||||||||||||  |||||||    
T  7425957 acttccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaacaagaacacttaaaaccatttttctctctcattcattt 7425858  T
Q  357 ataca 361  Q
    |||||    
T  7425857 ataca 7425853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 269 - 359
Target Start/End: Original strand, 23058856 - 23058947
Alignment:
Q  269 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcatttata 359  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||| | ||||||||||||||||  |||||||||||||||||    
T  23058856 ttaatatatttcactttgcatttatgatagtggagaatgcaccaatac-taacaagaacacttaaaactatttttctctctctttcatttata 23058947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 29257542 - 29257678
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  ||||||||||  |||||||||| |||||| |||||||| |||||||||||||| |||||||| |||  | ||||| ||||||| ||    
T  29257542 ccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagag 29257641  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
    |||||||||| |||||| |||||  ||||||||||||    
T  29257642 cacttaaaaccatttttttctctgcttcatttataca 29257678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 347
Target Start/End: Original strand, 36117656 - 36117777
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttat-aatagtggagaatgcatcaatacttaacaaaa 325  Q
    |||||||||| || |||||||||   |||||||| || ||||| |||||||| |||||| ||||||| ||||||||||||||||  ||||||||||||      
T  36117656 ccctttataactttaattaatatcactttcatcattttcaattcaatatattccactttacatttatgaatagtggagaatgcacaaatacttaacaagt 36117755  T
Q  326 gcacttaaaactatttttctct 347  Q
    ||||||||||||||||||||||    
T  36117756 gcacttaaaactatttttctct 36117777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 170 - 349
Target Start/End: Complemental strand, 31581608 - 31581433
Alignment:
Q  170 tcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatt 269  Q
    ||||||||||||||| |  |||||||||||||||||||||||||  |||        || ||||||| |  |||||||| |  |||||||| || |||||    
T  31581608 tcctaaaataactgagtcatttcacttttcaatacaatattaat--tactttttt--ccatttataactctaattaatactactttcatcattttcaatt 31581513  T
Q  270 taatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
     |||||||| || ||| ||||||| ||| ||||||||||| |||||||||||||| | |||||||||||||||| |||||    
T  31581512 caatatattccattttacatttatgatattggagaatgcaccaatacttaacaaatgtacttaaaactatttttatctct 31581433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 404
Target Start/End: Original strand, 48981652 - 48981830
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    |||||||||||  |||||| | |  ||| |||| ||||||||||||||||| |||||| ||||||| |||||||| |||  | |||||| ||||||  ||    
T  48981652 cctttataattctaattaacactacttttatcatttccaatttaatatattccactttacatttatgatagtggataatataccaatacataacaagtgc 48981751  T
Q  328 acttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    | |||||||||||||||| |||  ||||||||||||        |||| ||||||||||| ||||| ||||||||||||    
T  48981752 atttaaaactatttttctttcttcttcatttatacatttatcttaatacgtgtgaaatgaactttttgctcagttaatc 48981830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 349
Target Start/End: Complemental strand, 1643417 - 1643328
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||| |||||||||||||| |||||||||||||| ||  || |||||||| |||||||||| |||||||||| ||| |||||||||||||    
T  1643417 actttcaatttaatatattccactttgcatttatgattatgaagaatgcaccaatacttaataaaagcactttaaattatttttctctct 1643328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 349
Target Start/End: Complemental strand, 33774154 - 33774034
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    |||||||||||  |||||||| |  |||||  |||| ||||| | |||||| |||||||||| ||| |||||||||||| |||||||||||||||| | |    
T  33774154 cctttataattctaattaatactactttcacaacttacaattcagtatattccactttgcatctatgatagtggagaatacatcaatacttaacaaga-c 33774056  T
Q  328 acttaaaactatttttctctct 349  Q
    ||| ||||||||||||||||||    
T  33774055 actcaaaactatttttctctct 33774034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 23703949 - 23704033
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||| ||||||||||| ||| ||||||| ||||||||||||||| ||||| |||||||  || |||||||||||||||||||||    
T  23703949 caattcaatatatttcattttacatttatgatagtggagaatgcagcaataattaacaagtgcgcttaaaactatttttctctct 23704033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 227 - 403
Target Start/End: Complemental strand, 34963923 - 34963742
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtg---gagaatgcatcaatacttaacaa 323  Q
    |||||||||| |  ||||||||||  |||||||| |  ||||| ||||||||||||||| ||||||| ||||||   ||||||||| ||||| |||||||    
T  34963923 ccctttataactctaattaatattactttcatcattctcaattaaatatatttcactttacatttatgatagtgaaagagaatgcaccaatatttaacaa 34963824  T
Q  324 aagcacttaaaactatttttct--ctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaat 403  Q
       |||||||||||||||||||  |||| |||||||||||        |||| || ||||||||| |||| |||||||||||    
T  34963823 gttcacttaaaactatttttctccctctatcatttatacatttttcttaatacgtatgaaatgagttttttgctcagttaat 34963742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 21387566 - 21387476
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattttt 343  Q
    |||||||| || ||||| |||||||| |||||| ||||||| ||||||||||||||| |||||||||||||  ||| |||||| |||||||    
T  21387566 tttcatcattttcaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcatttaaaattattttt 21387476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 359
Target Start/End: Complemental strand, 38181953 - 38181852
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttct--ctctttcattta 357  Q
    |||||||||| ||||||||  | ||||||||||| |||||||| |||||| ||||||||| ||| | |||||||||| ||||||||  ||||||||||||    
T  38181953 acttccaattcaatatattctattttgcatttatgatagtggaaaatgcaccaatacttaccaagaacacttaaaaccatttttctctctctttcattta 38181854  T
Q  358 ta 359  Q
    ||    
T  38181853 ta 38181852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 7456676 - 7456598
Alignment:
Q  247 tattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaa 325  Q
    |||| |||||||||||   ||||||||||||| ||||||  |||||| |||||||||||| ||||||||||||||||||    
T  7456676 tattattttcatcactataaatttaatatattccactttatatttatgatagtggagaatacatcaatacttaacaaaa 7456598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 343
Target Start/End: Complemental strand, 46095494 - 46095416
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattttt 343  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||  |||| ||||||| |||||| ||||| ||||||    
T  46095494 caattcaatatatttcactttgcatttatgatagtagagaatgcacaaatatttaacaagagcactcaaaaccattttt 46095416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 32776004 - 32776100
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||| |||| |||||| ||||||||  ||||| ||||||| |||  | |||||||| |||||||||||||| ||||| ||||| ||||||||||||    
T  32776004 tttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaaggcactcaaaaccatttttctctct 32776100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 358
Target Start/End: Complemental strand, 34001933 - 34001843
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttcatttat 358  Q
    ||||| |||||||| |||||||||||||| ||| |||| |   |||||||||||||||| |||||||||||| ||||   ||||||||||||||    
T  34001933 caattcaatatattccactttgcatttatgataatggataccacatcaatacttaacaagagcacttaaaaccattt---tctctttcatttat 34001843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 34064224 - 34064345
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  ||||||||||  ||||| ||||||||  ||||| ||||||| |||    |||||||| ||||||||||||| | |||| |||||||||    
T  34064224 aattaatattactttcatcactctcaattcaatatattctactttacatttatgataagaaagaatgcaccaatacttaacaaga-cactcaaaactatt 34064322  T
Q  341 tttctctc--tttcatttataca 361  Q
    ||||||||  |||||||||||||    
T  34064323 tttctctctatttcatttataca 34064345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 44604563 - 44604454
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    ||||||||||  ||| | |||||||| |||||||| ||||| ||||||||||||  | ||||||||||||| | |||||||||  ||||||||||||  |    
T  44604563 tttcatcactctcaactcaatatattccactttgc-tttatgatagtggagaataaaccaatacttaacaagaacacttaaaatcatttttctctctcct 44604465  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  44604464 tcatttataca 44604454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 359
Target Start/End: Original strand, 37264334 - 37264440
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttc 352  Q
    ||||| |||| |||||| ||||||||  ||||||||||||| |||  |   ||||||||||||||| ||||  ||||| ||||| |||||||||||||||    
T  37264334 tttcaccactcccaattcaatatattctactttgcatttatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccatttttctctctttc 37264433  T
Q  353 atttata 359  Q
    | |||||    
T  37264434 acttata 37264440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 361
Target Start/End: Complemental strand, 40038222 - 40038085
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaata---tatttcactttgcatttataatagtggagaatgcatcaatacttaacaaa 324  Q
    ||||||||| |  |||||||| |  |||||||||||| |||||||||   ||||| |||||| |||||| |||||| ||||| || |||||||||||||     
T  40038222 cctttataactctaattaatactactttcatcacttcaaatttaatagtatattttactttgtatttatgatagtgaagaataca-caatacttaacaag 40038124  T
Q  325 agcacttaaaactatttttctc--tctttcatttataca 361  Q
    | || |||||| ||||||||||  || ||||||||||||    
T  40038123 atcatttaaaattatttttctctttccttcatttataca 40038085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 358
Target Start/End: Original strand, 28333180 - 28333298
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  |||||||||| |||||| ||||||||  ||||| ||||||| |||    | ||||||||||||||||||||   |||| |||||||||    
T  28333180 aattaatattactttcatcactcccaattcaatatattctactttacatttatgataagaaataatgcatcaatacttaacaagt-cactcaaaactatt 28333278  T
Q  341 tttctc--tctttcatttat 358  Q
    ||||||  ||||||||||||    
T  28333279 tttctctctctttcatttat 28333298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 361
Target Start/End: Complemental strand, 39343769 - 39343649
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | |||||| |||| | |||| ||||||||  ||||| ||||||| |||  | ||||| ||  ||||||| ||||| ||||| ||||| |||    
T  39343769 aattaatactattttcaccactccaaattcaatatattctactttacatttatgataaagaagaatacacaaatacttgacaaatgcactcaaaacgatt 39343670  T
Q  341 tttctctctttcatttataca 361  Q
     ||||||||||||||||||||    
T  39343669 gttctctctttcatttataca 39343649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 317
Target Start/End: Complemental strand, 46288543 - 46288453
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatact 317  Q
    |||||||||| |  |||||||| |  |||||| |||| ||||| |||||||| ||||||||||| || ||||| |||||||||| ||||||    
T  46288543 ccctttataactctaattaatactactttcataactttcaattcaatatattccactttgcattaatgatagtcgagaatgcattaatact 46288453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 361
Target Start/End: Original strand, 2849254 - 2849386
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||  |||||||| |  ||||| ||||  ||||| ||||||||  ||||| ||||||| |||  | |||||||| |||||||| |||||  |||     
T  2849254 ttataattctaattaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacacg 2849353  T
Q  331 taaaactatttt--tctctctttcatttataca 361  Q
     |||||||||||  |||||||||||||||||||    
T  2849354 caaaactatttttctctctctttcatttataca 2849386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 16870853 - 16870788
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt 318  Q
    ||||||||||||||| | | ||||||||||||||||||||| ||| ||  ||||| ||||||||||    
T  16870853 tttcatcacttccaactcactatatttcactttgcatttatgataatgatgaatgtatcaatactt 16870788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 349
Target Start/End: Complemental strand, 45218233 - 45218148
Alignment:
Q  264 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||| ||||||||  ||||| ||||||| |||  | |||||||| |||||||| | ||| ||||| ||||||||||||||||||    
T  45218233 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctct 45218148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 5083512 - 5083468
Alignment:
Q  299 tggagaatgcatcaatacttaacaaaagcacttaaaactattttt 343  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  5083512 tggagtatgcaccaatacttaacaagagcacttaaaactattttt 5083468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 25778765 - 25778805
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttat 293  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  25778765 tttcatcacttccaattcaatatattttactttgcatttat 25778805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 37157112 - 37157156
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    ||||||||||||||||  | |||||||||||||||||||||||||    
T  37157112 gtcctaaaataactgagctatttcacttttcaatacaatattaat 37157156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 37157179 - 37157259
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtgg-agaatgcatcaatacttaa 320  Q
    |||||||| | ||||||||| || ||||||||||||||  ||||| ||||||| ||||||| | |||||| ||||||||||    
T  37157179 aattaatacttttttcatcattttcaatttaatatattctactttacatttatgatagtggaaaaatgcaccaatacttaa 37157259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 345
Target Start/End: Original strand, 43780096 - 43780203
Alignment:
Q  244 taatattgttttcatcacttccaatttaatatatttcacttt------gcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaact 337  Q
    |||||||  ||| |||||| |||||||||||| |||||||||      |||||||||||| ||| ||||||| ||||| | ||||| || ||||||||||    
T  43780096 taatattaattttatcactcccaatttaatatctttcactttacatttgcatttataataatggtgaatgcaccaatattaaacaagagtacttaaaact 43780195  T
Q  338 atttttct 345  Q
     |||||||    
T  43780196 ctttttct 43780203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 351
Target Start/End: Complemental strand, 40590893 - 40590817
Alignment:
Q  271 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctcttt 351  Q
    ||||||||  |||||| |||||| |||| ||| |||||| ||||||||||||||| |||    ||||||||||||||||||    
T  40590893 aatatattctactttgtatttatgatagcggaaaatgcaccaatacttaacaaaaacac----aactatttttctctcttt 40590817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 349
Target Start/End: Original strand, 39498673 - 39498790
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||  ||||||||||  |||||||||| |||||| ||||||||  | |||| |||||| ||| |||  |||| | |||||||| |||  | || |    
T  39498673 ttataattctaattaatattactttcatcactcccaattcaatatattatattttgaatttatgataatggtaaatgaa-caatacttgacaggaacatt 39498771  T
Q  331 taaaactatttttctctct 349  Q
    |||||||||||||||||||    
T  39498772 taaaactatttttctctct 39498790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 45890886 - 45890848
Alignment:
Q  311 caatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  45890886 caatacttaacaaaagcatttaaaaccatttttctctct 45890848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 22618070 - 22618010
Alignment:
Q  303 gaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcatttataca 361  Q
    ||||| ||||||||||||||||| |||||||||| |||||  ||| ||||||| |||||||    
T  22618070 gaatgtatcaatacttaacaaaaacacttaaaacgattttcctctttctttcacttataca 22618010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 27337981 - 27337847
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    |||||| || ||||||||||  ||| | |||| |||||| ||||||||  ||||| ||||||| |||  | | |||||| |||||||| |||||  ||||    
T  27337981 ttataactttaattaatattacttttaccactcccaattcaatatattatactttacatttatgataaagaataatgcaccaatacttgacaaagacact 27337882  T
Q  331 taaaactattt----ttctctctttcatttataca 361  Q
     ||||||||||    |||||||||| |||||||||    
T  27337881 caaaactatttctctttctctcttttatttataca 27337847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 303
Target Start/End: Original strand, 5083518 - 5083550
Alignment:
Q  271 aatatatttcactttgcatttataatagtggag 303  Q
    ||||||||||||||||||||||| |||||||||    
T  5083518 aatatatttcactttgcatttatgatagtggag 5083550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 19687992 - 19688072
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttct 345  Q
    ||||| ||||||||  ||||||||||||| ||| |||  ||| ||||||||||| |||| | |||||||||  ||||||||    
T  19687992 caattcaatatattatactttgcatttatgataatggtaaattcatcaatacttgacaagaacacttaaaaacatttttct 19688072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 28923389 - 28923349
Alignment:
Q  173 taaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||| || ||||| |||||||||||||||||||    
T  28923389 taaaataactgacttatttcatttttcaatacaatattaat 28923349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 37491068 - 37491028
Alignment:
Q  173 taaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||| || ||| |||||||||||||||||||||    
T  37491068 taaaataactgagttattttacttttcaatacaatattaat 37491028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 48981320 - 48981364
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  48981320 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 48981364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 9e-37; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 173 - 404
Target Start/End: Original strand, 39979725 - 39979954
Alignment:
Q  173 taaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatttaa 272  Q
    |||||||| ||| || |||||||||||||||||||||||||  |||        |||||||||| |  ||||||||||  |||||||| |||||||| ||    
T  39979725 taaaataattgagttatttcacttttcaatacaatattaat--tactttttc--ccctttataactctaattaatattactttcatcatttccaattcaa 39979820  T
Q  273 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnnnnna 370  Q
    |||||| |||||| ||||||| ||||||||||||||| | |||||||||||  |||||||||||||||||||| |||  ||||||||||||        |    
T  39979821 tatattccactttacatttatgatagtggagaatgcaccgatacttaacaagtgcacttaaaactatttttctttctacttcatttatacatttttctta 39979920  T
Q  371 atatgtgtgaaatgagcttttggctcagttaatc 404  Q
    ||| ||||||||| ||||||||||||||||||||    
T  39979921 atacgtgtgaaataagcttttggctcagttaatc 39979954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 361
Target Start/End: Complemental strand, 18849871 - 18849735
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  ||||||||||  |||||  |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||    
T  18849871 ccctttataactctaattaatattactttcacaacttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaagag 18849772  T
Q  327 cacttaaaac--tatttttctctctttcatttataca 361  Q
    ||||||||||  ||||| | |||| ||||||||||||    
T  18849771 cacttaaaaccatatttctttctccttcatttataca 18849735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 227 - 361
Target Start/End: Complemental strand, 42024313 - 42024177
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  ||||||||||||||||| |||||||| |||||||||||||||||||||||||||  | ||||||||||||| ||    
T  42024313 ccctttataactataattaatactactttcatcacttccaattcaatatattccactttgcatttataatagtggagaatagaccaatacttaacaagag 42024214  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
     | ||||||| ||||||||||||  ||||||||||||    
T  42024213 tagttaaaaccatttttctctctccttcatttataca 42024177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 227 - 343
Target Start/End: Original strand, 3686006 - 3686122
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  ||||||||||  ||||||||||  ||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  3686006 ccctttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaag 3686105  T
Q  327 cacttaaaactattttt 343  Q
     |||||||||| |||||    
T  3686106 tacttaaaacttttttt 3686122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 255 - 350
Target Start/End: Original strand, 33047515 - 33047610
Alignment:
Q  255 tcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctt 350  Q
    ||||||||||||||| |||||||| ||||||| |||||| ||||||||||||  | |||||||||||||||||||||||||| |||||||||||||    
T  33047515 tcatcacttccaattcaatatattccactttgtatttatgatagtggagaatctaccaatacttaacaaaagcacttaaaaccatttttctctctt 33047610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 227 - 406
Target Start/End: Original strand, 38976986 - 38977168
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaa-tgcatcaatacttaacaaaa 325  Q
    |||||||||| |  |||||||| |  |||||||| || ||||| |||||||| |||||| ||||||| |||| |||||| |||| |||||||||| ||      
T  38976986 ccctttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatgataggggagaaatgcaccaatacttaagaagt 38977085  T
Q  326 gcacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
    ||||||||||||||||||||||||  ||||||||||||        |||| |||| |||||||||||||||||||||||||||    
T  38977086 gcacttaaaactatttttctctcttcttcatttatacatttttcttaatacgtgtaaaatgagcttttggctcagttaatctg 38977168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 174 - 361
Target Start/End: Complemental strand, 54729644 - 54729460
Alignment:
Q  174 aaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatttaat 273  Q
    |||||||||||||  ||||||||| |||||||||||||||  |||        |||||||||| |  |||||||| |  ||||||||| || |||| |||    
T  54729644 aaaataactgaatcatttcactttccaatacaatattaat--tactttttt--ccctttataactctaattaatactactttcatcacctc-aattcaat 54729550  T
Q  274 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttct--ctctttcatttataca 361  Q
    ||||| |||||||||||||| |||||||||||| ||  |||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  54729549 atattccactttgcatttatgatagtggagaatacactaatacttaacaaaaacacttaaaactatttttctctctctttcatttataca 54729460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 406
Target Start/End: Complemental strand, 4360482 - 4360339
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctc--tctttcatttatacan 362  Q
    ||||| |||||||| ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||| |||||||||  || |||||||||||      
T  4360482 caattcaatatattccactttgcatttatgctagtggagaatgcaccaatacttaacaaaagcacttaaaaccatttttctctttcattcatttatactt 4360383  T
Q  363 nnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
           |||||||||||||||| |   ||||||||||||||||    
T  4360382 ttttcttaatatgtgtgaaatgaacaaatggctcagttaatctg 4360339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 27977168 - 27977264
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||||||  ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  ||||||| ||||    
T  27977168 tttcatcactctcaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaaacacttaaaatcatttttcactct 27977264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 9093839 - 9093752
Alignment:
Q  262 ttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||  ||||||||||||  ||||||||||||||||||||||||    
T  9093839 ttccaatttaatatattccactttacatttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactatttttctctct 9093752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 229 - 361
Target Start/End: Complemental strand, 14009744 - 14009610
Alignment:
Q  229 ctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagca 328  Q
    |||||||| || ||||| |||||  |||||||||  ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||      
T  14009744 ctttataactttaattagtattgcgttcatcactctcaattcaatatatttcattttgcatttataatagtggagaatacatcaatacttaacaaaagtt 14009645  T
Q  329 cttaaaactatttttctctct--ttcatttataca 361  Q
    |  ||||| | ||||||||||  ||||||||||||    
T  14009644 cacaaaaccacttttctctctccttcatttataca 14009610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 283563 - 283454
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||||||| ||||||  ||||||| ||||||| |||| |||||||||||||||||  |||||||||||| |||||||||||| ||||||||||||  |    
T  283563 tttcatcactcccaattctatatattccactttgaatttctaatagtggagaatgcacaaatacttaacaagagcacttaaaacaatttttctctctcct 283464  T
Q  351 tcatttatac 360  Q
    ||||||||||    
T  283463 tcatttatac 283454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 253 - 404
Target Start/End: Original strand, 32559184 - 32559337
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||||||| | ||||||||||||| || |||||| |||| |||||||||||| ||| ||||||||||||||||| |||||| ||||||| || ||  |    
T  32559184 tttcatcactcctaatttaatatattccattttgcacttattatagtggagaatacattaatacttaacaaaagcatttaaaaatatttttatcccttct 32559283  T
Q  351 tcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    | |||||||||        |||||||||||||| | ||||||||||||||||||    
T  32559284 ttatttatacatttttcttaatatgtgtgaaattaacttttggctcagttaatc 32559337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 35909642 - 35909506
Alignment:
Q  270 taatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcatttatacannnnnn 367  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||  ||||||||| ||||||  ||| || ||||||||||||          
T  35909642 taatatatttcactttacatttataatagtggaaaatgcaccaatacttaacaaatacacttaaaattatttttatctttcattcatttatacatttttc 35909543  T
Q  368 nnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
      |||| ||||||||||| |||||| |||||||||||    
T  35909542 ttaatacgtgtgaaatgaacttttgactcagttaatc 35909506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 361
Target Start/End: Complemental strand, 41710256 - 41710120
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  ||||||||||  |||||||||| |||||| |||||||| |||||||||||||| |||||||| |||  | ||||| ||||||| ||    
T  41710256 ccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgatagtggaaaatagaccaataattaacaagag 41710157  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
    |||||||||| |||||| |||||  ||||||||||||    
T  41710156 cacttaaaaccatttttttctctgcttcatttataca 41710120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 350
Target Start/End: Complemental strand, 22872486 - 22872375
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaa--agcacttaaaacta 338  Q
    ||||||||||  ||||||||||  ||||| |||||||| |||||||||||||| ||| ||||||||||| |||||||| |||||  |||||||||||| |    
T  22872486 aattaatattactttcatcactctcaattcaatatattccactttgcatttatgataatggagaatgcaccaatacttgacaaacgagcacttaaaacca 22872387  T
Q  339 tttttctctctt 350  Q
    ||||||||||||    
T  22872386 tttttctctctt 22872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 228 - 361
Target Start/End: Original strand, 49306583 - 49306718
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  |||||||| |  |||||||||| | |||| |||||||| |||||||||||||| |||| |||||||  | ||||||||||||| |||    
T  49306583 cctttataactctaattaatactactttcatcactcctaattcaatatattccactttgcatttatgataggggagaatagaccaatacttaacaagagc 49306682  T
Q  328 acttaaaactatttt--tctctctttcatttataca 361  Q
    ||||||||| |||||  |||||||||||||||||||    
T  49306683 acttaaaaccatttttctctctctttcatttataca 49306718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 253 - 359
Target Start/End: Original strand, 17237064 - 17237172
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    ||||||| ||| ||||| |||||||| |||||||||||||| |||||  ||||| ||  |||||||||||||| |||||||||||||||||||||||  |    
T  17237064 tttcatcgctttcaattcaatatattccactttgcatttatgatagtaaagaatccactaatacttaacaaaatcacttaaaactatttttctctctcct 17237163  T
Q  351 tcatttata 359  Q
    |||||||||    
T  17237164 tcatttata 17237172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 228 - 349
Target Start/End: Original strand, 37309694 - 37309815
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  ||||||||||  ||||||||||  ||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| | |    
T  37309694 cctttataactctaattaatattactttcatcactctcaattcaatatatttaactttgcatttatgatagtagagaatgcatcaatacttaacaagaac 37309793  T
Q  328 acttaaaactatttttctctct 349  Q
    | |||||   ||||||||||||    
T  37309794 aattaaagtcatttttctctct 37309815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 241 - 349
Target Start/End: Complemental strand, 38160250 - 38160142
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  ||| ||||||  ||||| |||||||||||||||| |||||| ||| ||||||||||||||||| || |||||  |||||||||| |||    
T  38160250 aattaatattacttttatcactctcaattcaatatatttcactttgtatttatgataatggagaatgcatcaatatttgacaaagacacttaaaacaatt 38160151  T
Q  341 tttctctct 349  Q
    |||||||||    
T  38160150 tttctctct 38160142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 39976476 - 39976371
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttc 352  Q
    ||||||||||  ||||| |||||||| |||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||   || |||||| |||    
T  39976476 tttcatcactctcaattcaatatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaac--cttctctctccttc 39976379  T
Q  353 atttatac 360  Q
    ||||||||    
T  39976378 atttatac 39976371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 404
Target Start/End: Original strand, 49812224 - 49812403
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| | ||||||||  | |||||  |||||||| |||||| ||||||| |||||||| |||||| |||||||||||||  |    
T  49812224 ccctttataactctaattaatactattttcatctttcccaatacaatatattccactttacatttatgatagtggataatgcaccaatacttaacaagtg 49812323  T
Q  327 cacttaaaacta--tttttctctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    ||||||||||||  |||||||||| |||||||||| |        ||||  ||||||||||| ||||| |||||||||||    
T  49812324 cacttaaaactatttttttctctccttcatttataaatttttcttaatacatgtgaaatgagtttttgactcagttaatc 49812403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 404
Target Start/End: Original strand, 8295061 - 8295203
Alignment:
Q  264 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcatttataca 361  Q
    |||||| ||||||||  || |||||||||| ||||||||||||||| ||||||||| ||| || ||||||||| |||||  |||||||||||||||||||    
T  8295061 ccaattcaatatattatacattgcatttatgatagtggagaatgcaccaatacttatcaagaggacttaaaacaatttttctctctctttcatttataca 8295160  T
Q  362 nnnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
            ||| ||||||||||||||   ||||||||||||||    
T  8295161 tttttcttaatttgtgtgaaatgagcaaatggctcagttaatc 8295203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 41203762 - 41203868
Alignment:
Q  257 atcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttc--tctctttcat 354  Q
    ||||||| ||||| |||||||| ||||||| ||||||  ||||| |||||||||||||||||||||| |||||| ||||| |||||||  |||| |||||    
T  41203762 atcactttcaattcaatatattccactttgtatttatggtagtgaagaatgcatcaatacttaacaagagcactaaaaaccatttttctatctccttcat 41203861  T
Q  355 ttataca 361  Q
    |||||||    
T  41203862 ttataca 41203868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 413
Target Start/End: Complemental strand, 1825346 - 1825170
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatc--aatacttaacaaaagcacttaaaacta 338  Q
    |||||||||| ||||||||| || ||||| |||||||| |||||| ||||||| | ||| ||||||||||   ||||||||||||  |||||||||||||    
T  1825346 aattaatattattttcatcattttcaattcaatatattccactttacatttatgaaagttgagaatgcatactaatacttaacaagtgcacttaaaacta 1825247  T
Q  339 tttttc--tctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctgatacgga 413  Q
    ||||||  |||| || |||||||||        |||||||||||||||| |||||  || | ||||||||| |||||    
T  1825246 tttttctatctcctttatttatacatttttcttaatatgtgtgaaatgaacttttaactaaattaatctgagacgga 1825170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 403
Target Start/End: Complemental strand, 47787933 - 47787781
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||||| || |||||  |||||||| | ||| ||||||| |||||| || |||||||| ||||||||||  || ||||||||||||||| |||||  |    
T  47787933 tttcatcattttcaattccatatattttattttacatttatgatagtgaaggatgcatcagtacttaacaagtgcccttaaaactatttttatctcttct 47787834  T
Q  351 tcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaat 403  Q
    |||||||||||        |||| |||||||||||||||||| ||||||||||    
T  47787833 tcatttatacatttttcttaatacgtgtgaaatgagcttttgactcagttaat 47787781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 41436530 - 41436598
Alignment:
Q  281 actttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||    
T  41436530 actttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttttctct 41436598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 349
Target Start/End: Original strand, 45290033 - 45290153
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  ||| |||||| ||||||||||| |||||| |||||| | |||||||||||||  |||||||||||| || |||||||| | || ||    
T  45290033 ccctttataactctaatcaatattattttcatcactcccaattgaatatact-cactttgcatttacgatagtggagaatacaccaatactt-agaatag 45290130  T
Q  327 cacttaaaactatttttctctct 349  Q
    |||||||||||||||||| ||||    
T  45290131 cacttaaaactatttttccctct 45290153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 347
Target Start/End: Original strand, 30568668 - 30568778
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtgga----gaatgcatcaatacttaacaaaagcacttaaaac 336  Q
    |||||||||| |||||||||||  ||||| ||||||||||||||||||||||| ||||  ||    |||||||  |||||||||||| | ||||||||||    
T  30568668 aattaatattattttcatcactctcaattcaatatatttcactttgcatttatgatagcagagaatgaatgcactaatacttaacaataacacttaaaac 30568767  T
Q  337 tatttttctct 347  Q
     ||||||||||    
T  30568768 catttttctct 30568778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 349
Target Start/End: Original strand, 42544205 - 42544326
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  ||||||||||  ||| ||||||  ||||| |||||||| |||||||||||||| ||||||||||||  |  |||||||||||| |||    
T  42544205 cctttataactctaattaatattacttttatcactcacaattcaatatattccactttgcatttatgatagtggagaatagactaatacttaacaagagc 42544304  T
Q  328 acttaaaactatttttctctct 349  Q
    ||||||||  |||| |||||||    
T  42544305 acttaaaatcatttctctctct 42544326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 50328145 - 50328057
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt-tctctctttc 352  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||| ||||   |||||||||| ||||| ||||||||||    
T  50328145 caattcaatatatttcactttgcatttatgatagtggtgaatgcaccaatacttgacaagtacacttaaaaccattttctctctctttc 50328057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 361
Target Start/End: Complemental strand, 51572310 - 51572206
Alignment:
Q  257 atcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttcattt 356  Q
    ||||||||||||| |||||||| |||||| ||||||| ||||| || |||||| |||||| |||| ||||  |||||||| |||| | |||| |||||||    
T  51572310 atcacttccaattcaatatattacactttacatttatgatagtagaaaatgcaccaatacataacgaaagttcttaaaaccatttgtgtctccttcattt 51572211  T
Q  357 ataca 361  Q
    |||||    
T  51572210 ataca 51572206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 241 - 361
Target Start/End: Complemental strand, 16493394 - 16493274
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac--ta 338  Q
    ||||||||||  |||||| |||||||||| |||||||| ||||||||| |||| ||||  |||||||||  ||||||| |||||| ||||||||||  |     
T  16493394 aattaatattactttcataacttccaattcaatatattccactttgca-ttatgatagctgagaatgcacaaatactt-acaaaaacacttaaaaccatt 16493297  T
Q  339 tttttctctctttcatttataca 361  Q
    ||||||||||||| |||||||||    
T  16493296 tttttctctcttttatttataca 16493274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 28974327 - 28974437
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaacta--tttttctctctt 350  Q
    ||||||||||  || || |||||||| | |||||||||||| ||| ||||||||||| ||||||||||||| | |||||||||| |  ||| |||| |||    
T  28974327 tttcatcactctcatttcaatatattcccctttgcatttatgataatggagaatgcaccaatacttaacaacaacacttaaaaccacttttatctccctt 28974426  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  28974427 tcatttataca 28974437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 42185882 - 42185772
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttc--tctctt 350  Q
    ||||||||||  ||||| |||||||||||| ||| |||||| |||||||| |||  | ||||||||||||| |||||||||||  |||||||  |||| |    
T  42185882 tttcatcactctcaattcaatatatttcaccttgtatttatgatagtggataatagaccaatacttaacaagagcacttaaaatcatttttctatctcct 42185783  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  42185782 tcatttataca 42185772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 351
Target Start/End: Complemental strand, 26799290 - 26799204
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctcttt 351  Q
    ||||| ||||||||  | ||||||||||| |||||||| ||| ||||||||||||| || | |||||||| ||||||||||||||||    
T  26799290 caattcaatatattctattttgcatttatgatagtggaaaatacatcaatacttaaaaagaacacttaaatctatttttctctcttt 26799204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 347
Target Start/End: Complemental strand, 52677117 - 52677023
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctct 347  Q
    ||||||||||  ||||||||||||||| ||||| ||||||| ||| ||   |||||||||||||||| ||| |||||||||||  ||||||||||    
T  52677117 tttcatcactctcaatttaatatattttactttacatttatgataatgataaatgcatcaatacttatcaagagcacttaaaatcatttttctct 52677023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 359
Target Start/End: Original strand, 4357577 - 4357696
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | ||||||||||| |||||| |||||||||   |||| |||||| |||||| ||||| || ||||||||||||||| |||||||||  ||     
T  4357577 aattaatactattttcatcactcccaattcaatatattttt-tttgtatttatgatagtgaagaatccaccaatacttaacaaaaacacttaaaatcatc 4357675  T
Q  341 tttctctct--ttcatttata 359  Q
    |||||||||  ||||||||||    
T  4357676 tttctctctccttcatttata 4357696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 8065572 - 8065644
Alignment:
Q  271 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattttt 343  Q
    |||||||  |||||| ||||||| ||||| ||||||||| |||||||||||||  ||||||||||||||||||    
T  8065572 aatatataccactttacatttatgatagtagagaatgcaccaatacttaacaagtgcacttaaaactattttt 8065644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 18509850 - 18509958
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | |||||| ||||| || || |||||||| ||||||| ||||||  |||| || |||||| ||||||||||||| |  |||||||| ||||    
T  18509850 aattaatactattttcaccacttacacttcaatatattccactttgtatttatgttagtagataatgcaccaatacttaacaagaatacttaaaaatatt 18509949  T
Q  341 tttctctct 349  Q
    |||||||||    
T  18509950 tttctctct 18509958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 31862827 - 31862903
Alignment:
Q  270 taatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctc 346  Q
    ||||||||| |||||||||| ||| |||||| ||| |||||||||||||||||| || | ||||||| |||||||||    
T  31862827 taatatattccactttgcatctatgatagtgaagagtgcatcaatacttaacaagagaaattaaaaccatttttctc 31862903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 387
Target Start/End: Original strand, 34021059 - 34021194
Alignment:
Q  254 ttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--tt 351  Q
    |||||||||  ||||| ||||||||  ||||||||||||| ||||| ||||||||| ||||||  ||||| | |||| |||| |||||||||||||  ||    
T  34021059 ttcatcactctcaattcaatatattagactttgcatttatgatagtagagaatgcaccaataccgaacaagaacactgaaaattatttttctctctcctt 34021158  T
Q  352 catttatacannnnnnnnaatatgtgtgaaatgagc 387  Q
     |||||||||        ||||||||||||||||||    
T  34021159 tatttatacatttgtctcaatatgtgtgaaatgagc 34021194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 40881256 - 40881184
Alignment:
Q  275 tatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctct 347  Q
    |||| |||||| ||||||| |||||||||||| |||||||| |||||||| | | ||||||||||||||||||    
T  40881256 tattccactttacatttatgatagtggagaatacatcaatatttaacaaatgtaattaaaactatttttctct 40881184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 49448874 - 49448958
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||| ||||||||  ||||||||||||| ||| | |||||||||  ||||||| |||| |||||||||||| ||||||||||||    
T  49448874 caattcaatatattatactttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccatttttctctct 49448958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 343
Target Start/End: Original strand, 21240934 - 21241004
Alignment:
Q  273 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattttt 343  Q
    ||||||||||||||||||||| ||| ||| ||||  | |||||||| |||| |||||||||||||||||||    
T  21240934 tatatttcactttgcatttatgataatggtgaattgaccaatacttgacaagagcacttaaaactattttt 21241004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 349
Target Start/End: Original strand, 25149479 - 25149569
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggag-aatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||||||| |||||||| |||||| ||||||| |||   ||| |||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  25149479 acttccaattcaatatattccactttacatttatgataaaagaggaatgcaccaatacttaaaaaaggcactcaaaactatttttctctct 25149569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 26185224 - 26185313
Alignment:
Q  274 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttataca 361  Q
    ||||| ||| |||||||||| ||||||||||||  | ||||||||||||| || | ||||||| ||||||||||||  ||||||||||||    
T  26185224 atattccacgttgcatttatgatagtggagaatagaccaatacttaacaagagtatttaaaaccatttttctctctccttcatttataca 26185313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 51527439 - 51527501
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaata 315  Q
    |||||||| || ||||| ||||||||||||||| ||||||| ||||||||||||||| |||||    
T  51527439 tttcatcattttcaattcaatatatttcactttacatttatgatagtggagaatgcaccaata 51527501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 42670423 - 42670307
Alignment:
Q  299 tggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctc 396  Q
    ||||||||||| |||||||||| ||  |||||||| |||||||||||||||  || |||||||||        |||| ||||||||||||||||||| ||    
T  42670423 tggagaatgcaccaatacttaagaagtgcacttaagactatttttctctctcatttatttatacatttttcttaatacgtgtgaaatgagcttttggttc 42670324  T
Q  397 agttaatctgatacgga 413  Q
    | |||||| || |||||    
T  42670323 aattaatccgagacgga 42670307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 361
Target Start/End: Complemental strand, 39258384 - 39258246
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaata---cttaacaa 323  Q
    |||||||||| || |||||||| |  ||||||||||  |||||||||||||| || ||| ||||||| |||||  ||||||||  ||||   ||||||||    
T  39258384 ccctttataactttaattaataatactttcatcactctcaatttaatatattccattttacatttatgatagtaaagaatgcacgaatagtgcttaacaa 39258285  T
Q  324 aagcacttaaaactatttt-tctctctttcatttataca 361  Q
     |||||||||||  ||||| |||||| |||| |||||||    
T  39258284 gagcacttaaaatcattttctctctcattcacttataca 39258246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 307
Target Start/End: Original strand, 43421328 - 43421375
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatg 307  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  43421328 acttccaattcaatatatttcattttgcatttatgatagtggagaatg 43421375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 42132822 - 42132896
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaata 315  Q
    ||||||||||  ||||| ||||||||||| ||||||||  ||||||||||||| |||  | ||||||||||||||    
T  42132822 aattaatattactttcaccacttccaattcaatatattctactttgcatttatgataaagaagaatgcatcaata 42132896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 344
Target Start/End: Complemental strand, 27790528 - 27790415
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||| ||||||||||  |||||| ||||| |||||||||||||  | ||||||||||  ||  ||| |||||||  |||| || |||| ||||||    
T  27790528 ttataattttaattaatattactttcattacttctaatttaatatattcaattttgcatttaagatgatggtgaatgcactaatatttgacaagagcact 27790429  T
Q  331 taaaactatttttc 344  Q
    |||||  |||||||    
T  27790428 taaaatcatttttc 27790415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 37786960 - 37787053
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaa 324  Q
    ||||||||| |||||||||| |||||| ||||| ||||||||||||||  | ||| |||||||  ||  | ||||||||||| ||||| |||||    
T  37786960 ttataattttaattaatattattttcaccactttcaatttaatatattctattttacatttatggtaaagaagaatgcatcactacttgacaaa 37787053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 42051764 - 42051632
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||  ||||| |||| |||||| ||||||||||| | ||||||  ||||| ||||||| |||  | |||||||| ||||||||   |||  ||||    
T  42051764 ttataattctaattattattattttcaccacttccaattcattatattctactttacatttatgataaagaagaatgcaccaatacttgctaaagacact 42051665  T
Q  331 taaaactatttttc--tctctttcatttataca 361  Q
     ||||| |||||||  |||||||||||||||||    
T  42051664 aaaaaccatttttctatctctttcatttataca 42051632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 43335097 - 43334973
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctct--ctttcatttatacan 362  Q
    ||||| |||||||| |||||| |||||| |||| |||||||||||  |||| || |||| | ||||||||| ||||||||| |  | ||||||||||||     
T  43335097 caattcaatatattccactttccatttaaaataatggagaatgcactaatatttgacaagaacacttaaaattatttttctattacattcatttatacat 43334998  T
Q  363 nnnnnnnaatatgtgtgaaatgagc 387  Q
           ||||||||||||||||||    
T  43334997 ttttcttaatatgtgtgaaatgagc 43334973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 43335186 - 43335145
Alignment:
Q  172 ctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  43335186 ctaaaataactgatttatttcacttttcaatacaatattaat 43335145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 48740515 - 48740604
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatac 316  Q
    |||||||||| |  ||||||||||  ||| |||| ||  |||| |||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  48740515 ccctttataactctaattaatattacttttatcatttttaattcaatatattccactttacatttatgatagtggagaatgcaccaatac 48740604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 11583969 - 11583913
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataata 297  Q
    ||||||||||  ||||||||||  ||||||||||||||| ||||| |||||||||||    
T  11583969 aattaatattactttcatcactctcaatttaatatattttactttacatttataata 11583913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 35027595 - 35027543
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 293  Q
    |||| ||||| |||||||||||| ||||||||||||||| ||||||| |||||    
T  35027595 aattcatattattttcatcactttcaatttaatatatttaactttgcgtttat 35027543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 42367869 - 42367920
Alignment:
Q  312 aatacttaacaaaagcacttaaaactatttttctctct--ttcatttataca 361  Q
    ||||||||||||  ||||||||||||||||||||||||  ||||||||||||    
T  42367869 aatacttaacaagtgcacttaaaactatttttctctctcattcatttataca 42367920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 51572393 - 51572349
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||| ||| || |||||||||||||||||||||||||    
T  51572393 gtcctaaaataattgacttatttcacttttcaatacaatattaat 51572349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 349
Target Start/End: Complemental strand, 40021032 - 40020938
Alignment:
Q  255 tcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||||| |||||||||||||||    ||||||| ||| ||| |||  |||||| |||||||| |||||| || | ||||| ||||||||||||    
T  40021032 tcatcactcccaatttaatatattcttttttgcatctatgataatggtaaatgcaccaatacttgacaaaaacattcaaaaccatttttctctct 40020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 29550758 - 29550717
Alignment:
Q  308 catcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||    
T  29550758 catcaatacttaaaaaaggcactcaaaactatttttctctct 29550717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 334
Target Start/End: Original strand, 47846920 - 47847000
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaa 334  Q
    |||||||||| | |||| ||||||||||||||||||||||| ||| | |||||||||  ||||| ||| || |||| |||||    
T  47846920 tttcatcactcctaattcaatatatttcactttgcatttatgata-tagagaatgcacaaatacataagaagagcatttaaa 47847000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 1825414 - 1825370
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||||||| |  ||||||||||||||| |||||||||    
T  1825414 gtcctaaaataactgagtcatttcacttttcaatataatattaat 1825370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 3685952 - 3685996
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||    
T  3685952 gtcctaaaataactgagtcatttcactttccaatacaatattaat 3685996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 25902549 - 25902438
Alignment:
Q  252 ttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttct--ctct 349  Q
    |||||| || |||||||| ||||||||  |||||  |||||||| |  | ||||||||  |||||||||||||| |||| ||||| ||||| ||  ||||    
T  25902549 ttttcaccatttccaattcaatatattcaactttatatttataacaaagaagaatgcactaatacttaacaaaaacactcaaaaccattttacttcctct 25902450  T
Q  350 ttcatttataca 361  Q
    |||| |||||||    
T  25902449 ttcacttataca 25902438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 28974253 - 28974293
Alignment:
Q  174 aaaataactgaattgtttcacttttcaatacaatattaata 214  Q
    ||||||||||| |  ||||||||||||||||||||||||||    
T  28974253 aaaataactgagtcatttcacttttcaatacaatattaata 28974293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 33047439 - 33047483
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  33047439 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 33047483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 45289983 - 45290019
Alignment:
Q  174 aaaataactgaattgtttcacttttcaatacaatatt 210  Q
    |||||||||||||| |||||||||||| |||||||||    
T  45289983 aaaataactgaattatttcacttttcagtacaatatt 45290019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 49812170 - 49812214
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  49812170 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 49812214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 341
Target Start/End: Original strand, 50714615 - 50714691
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactattt 341  Q
    ||||| |||||||| ||||||  |||||| ||| ||| |||||||  | ||||| |||| |||||||||||||||||    
T  50714615 caattcaatatattccactttcaatttatgataatggtgaatgcactactacttgacaagagcacttaaaactattt 50714691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 253 - 403
Target Start/End: Original strand, 23684980 - 23685132
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    ||||||||||  ||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||||||| ||||||||||  |    
T  23684980 tttcatcactctcaattcaatatatttcactttgcatttatgatagtggagaatgcactaatacttaacaaaaacacttaaaactaattttctctctcct 23685079  T
Q  351 tcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaat 403  Q
    | |||||||||        |||||| |||||||||||||||||||||||||||    
T  23685080 ttatttatacatttttcttaatatgcgtgaaatgagcttttggctcagttaat 23685132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 227 - 349
Target Start/End: Complemental strand, 28925960 - 28925838
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |||||| |||| | |||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||  |    
T  28925960 ccctttataactctaattaatactgttttgatcattcccaattcaatatatttcactttacaattatgatagtggagaatgcatcaatacttaacaagtg 28925861  T
Q  327 cacttaaaactatttttctctct 349  Q
    |||||||||||||||||||||||    
T  28925860 cacttaaaactatttttctctct 28925838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 265 - 406
Target Start/End: Original strand, 41436112 - 41436254
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt-tctctctttcatttatacann 363  Q
    ||||| |||||||| |||||||||||||| |||||| ||||| |||||||||||||||||| ||||||||| |||||| |||||  ||||||||||||      
T  41436112 caattcaatatattccactttgcatttatgatagtgaagaatacatcaatacttaacaaaaacacttaaaattattttctctctaattcatttatacatt 41436211  T
Q  364 nnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
          ||||||||||||||||||||||| || ||||||||||    
T  41436212 tttcttaatatgtgtgaaatgagcttttgactgagttaatctg 41436254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 361
Target Start/End: Complemental strand, 5212124 - 5211934
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 268  Q
    |||||||||||||||| || |||||||||||||||||||||||||  |||         ||||||||| || |||||||| |  |||||  |||| ||||    
T  5212124 gtcctaaaataactgagttatttcacttttcaatacaatattaat--tacttttttt--cctttataaatttaattaatactactttcacaactttcaat 5212029  T
Q  269 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttataca 361  Q
    | |||||||| |||||||||||||| ||||| || ||||||  |||||||||||| |||||||||||||||||||| ||||  ||||||||||||    
T  5212028 tcaatatattccactttgcatttatgatagttgataatgcacaaatacttaacaagagcacttaaaactatttttccctcttcttcatttataca 5211934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 359
Target Start/End: Original strand, 3100428 - 3100529
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcattta 357  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||  ||||||||||||  ||||||||    
T  3100428 acttccaatttaatatattccactttgcatttatgatagtggagaatgcagcaatacttaacaagatcacttaaaatcatttttctctctccttcattta 3100527  T
Q  358 ta 359  Q
    ||    
T  3100528 ta 3100529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 2882024 - 2882116
Alignment:
Q  271 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttc--tctctttcatttataca 361  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||  |||||||  |||||||||||||||||    
T  2882024 aatatatttcactttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttttctatctctttcatttataca 2882116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 227 - 343
Target Start/End: Complemental strand, 37247996 - 37247880
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  ||||||||||  |||||||||   ||||| ||||||||||||||||||||||| ||||||||||||  | ||||||||||||| ||    
T  37247996 ccctttataactctaattaatattactttcatcacactcaattcaatatatttcactttgcatttatgatagtggagaatagaccaatacttaacaagag 37247897  T
Q  327 cacttaaaactattttt 343  Q
    |||||||||||||||||    
T  37247896 cacttaaaactattttt 37247880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 406
Target Start/End: Complemental strand, 43077824 - 43077657
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  |||||||| || ||||| ||||||||||||||| ||||||| | |||||| |||||| ||||| |||||||   || |||||||||||    
T  43077824 aattaatattactttcatcattttcaattcaatatatttcactttacatttatgacagtggaaaatgcaccaatagttaacaagtacatttaaaactatt 43077725  T
Q  341 tttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
    |||||||||  ||||||||||||        |||| ||||||||||| |||||| |||||||||||||    
T  43077724 tttctctctcattcatttatacatttgtcttaatacgtgtgaaatgaacttttgactcagttaatctg 43077657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 228 - 406
Target Start/End: Complemental strand, 13375301 - 13375119
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatattt-cactttgcatttataatagtggagaatgcatcaata-cttaacaaaa 325  Q
    ||||||||| |  |||||||||| ||||||||| |  ||||| ||||||||| |||||| ||||||| ||||||||||||||| ||||| ||||||||      
T  13375301 cctttataactctaattaatattattttcatcattctcaattcaatatattttcactttacatttatgatagtggagaatgcaccaataccttaacaact 13375202  T
Q  326 gcacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
    |||||||||| ||||| |||||||  ||||||||||||        |||| |||||||||||| ||||| |||||||||||||    
T  13375201 gcacttaaaattatttatctctctccttcatttatacatttttcttaatacgtgtgaaatgagattttgactcagttaatctg 13375119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 28301455 - 28301565
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctc--tctt 350  Q
    ||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||  | ||||||||||||| |||||||||||| |||||||||  || |    
T  28301455 tttcatcactctcaattcaatatatttcactttgcatttatgatagtggagaatagaccaatacttaacaagagcacttaaaaccatttttctctttcct 28301554  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  28301555 tcatttataca 28301565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 260 - 361
Target Start/End: Original strand, 28572236 - 28572338
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt-tctctctttcatttat 358  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||  ||||| |||||| || ||||||    
T  28572236 acttccaattcaatatatttcattttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcattttctctctcctttatttat 28572335  T
Q  359 aca 361  Q
    |||    
T  28572336 aca 28572338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 265 - 404
Target Start/End: Complemental strand, 435152 - 435009
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcatttatac-- 360  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||  |||| |||||||  |||||||||||||||||  ||||||||||||||||||      
T  435152 caattcaatatatttcactttacatttatgatagtggagaatgcactaatatttaacaagtgcacttaaaactatttttgtctctctttcatttatacat 435053  T
Q  361 annnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    |        |||| ||||||||||||||||||||||| ||||||    
T  435052 atttttcttaatacgtgtgaaatgagcttttggctcatttaatc 435009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 423
Target Start/End: Complemental strand, 30757654 - 30757483
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||||| | |||||| |||||||| || ||| ||||||| |||||||| ||||||| ||||||||||||  ||||||||||||||||||||||||  |    
T  30757654 tttcatcattcccaattcaatatattccaatttacatttatgatagtggaaaatgcattaatacttaacaagtgcacttaaaactatttttctctctcct 30757555  T
Q  351 tcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctgatacggaaagagtatta 423  Q
    |||||||||||        ||||||| | ||||||  |||||||||||||||||||  |||||  ||||||||    
T  30757554 tcatttatacatttttcttaatatgtattaaatga-tttttggctcagttaatctgggacggagggagtatta 30757483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 173 - 361
Target Start/End: Complemental strand, 7650137 - 7649952
Alignment:
Q  173 taaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaatttaa 272  Q
    ||||||||||||||  |||||||||| ||||||||||||||  |||        || ||||||| |  |||||||| | | ||||||| || ||||| ||    
T  7650137 taaaataactgaatcatttcacttttaaatacaatattaat--tac--ttttttccttttataactctaattaatactatcttcatcattttcaattcaa 7650042  T
Q  273 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcatttataca 361  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||   ||||| ||||||||||||    
T  7650041 tatattccactttgcatttatgatagtggagaatgcatcagtacttaacaagagcacttaaaa-tattttgcgctctccttcatttataca 7649952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 24775894 - 24775784
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--t 350  Q
    |||||||| ||  |||| ||||||||||||||| ||||||| |||||||||||| || |||||||||||||  |||||||||| |||||||||||||  |    
T  24775894 tttcatcatttttaattcaatatatttcactttacatttatgatagtggagaatacaccaatacttaacaagtgcacttaaaattatttttctctctcct 24775795  T
Q  351 tcatttataca 361  Q
    |||||||||||    
T  24775794 tcatttataca 24775784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 359
Target Start/End: Complemental strand, 28108487 - 28108353
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  |||||||| |  ||||| |||||||| |||||| ||| ||| ||||||||||||||| |||||||||||||  |    
T  28108487 ccctttataactctaattaatactactttcatcattctcaattcaatatattccactttacatgtatgatagtggagaatgcaccaatacttaacaagtg 28108388  T
Q  327 cacttaaaactatttttctctct--ttcatttata 359  Q
    |||||||||||||||||||||||  ||||||||||    
T  28108387 cacttaaaactatttttctctctccttcatttata 28108353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 349
Target Start/End: Complemental strand, 11726830 - 11726712
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||| |||||||| |  ||||||||||   |||| ||||||||  |||||||| |||| |||||||||||||||| ||||| |||||| || |||    
T  11726830 ttataattttaattaatactactttcatcactcttaattcaatatattctactttgcaattatgatagtggagaatgcattaatacataacaatagtact 11726731  T
Q  331 taaaactatttttctctct 349  Q
    |||||||||||||||||||    
T  11726730 taaaactatttttctctct 11726712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 227 - 359
Target Start/End: Complemental strand, 15859454 - 15859323
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||| |||  |||||  ||||| |||| |||||||||||||||||||||||    |||||||||||  ||||||||||||||||    
T  15859454 ccctttataactctaattaacattactttcacaacttctaattcaatatatttcactttgcatttatt---gtggagaatgccccaatacttaacaaaag 15859358  T
Q  327 cacttaaaactatttttctctct--ttcatttata 359  Q
     ||||||||||||||||||||||  ||||||||||    
T  15859357 tacttaaaactatttttctctctccttcatttata 15859323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 264 - 349
Target Start/End: Complemental strand, 18181288 - 18181203
Alignment:
Q  264 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||| || |||||  ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  18181288 ccaattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagcacttaaaaccatttttctctct 18181203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 359
Target Start/End: Original strand, 8031737 - 8031868
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| || |||||||| |  ||| |||| |  ||||| ||||||||| ||||||||||||| ||| |||||||| |||||||||||||||| | |    
T  8031737 cctttataactttaattaatactacttttatcattcacaattcaatatatttaactttgcatttatgataatggagaatacatcaatacttaacaagaac 8031836  T
Q  328 acttaaaactatttttctctctttcatttata 359  Q
    || |||||  |||||||||||||| |||||||    
T  8031837 acataaaatcatttttctctctttaatttata 8031868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 406
Target Start/End: Original strand, 3123639 - 3123822
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaata---tatttcactttgcatttataatagtggagaatgcatcaatacttaacaaa 324  Q
    ||||||||| |  |||||||||| |||||||||||  ||||| ||||   |||| || |||| |||||| |||||| |||||||| ||||||||||  ||    
T  3123639 cctttataactctaattaatattattttcatcactcacaattcaatactatattccattttgtatttatgatagtgaagaatgcaccaatacttaatgaa 3123738  T
Q  325 agcacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
    ||||||||||| |||||||||||||  |||| |||||||        |||||||||||||||| | |||  |||||||||||||    
T  3123739 agcacttaaaattatttttctctctacttcagttatacatttttcttaatatgtgtgaaatgaacatttaactcagttaatctg 3123822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 43950530 - 43950438
Alignment:
Q  257 atcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||| ||||| ||||||||  |||||||||||||  || |||| ||| |||||||||||||||||| || ||||||||||||||||||||    
T  43950530 atcactttcaattcaatatattctactttgcatttatgttaatggaaaatacatcaatacttaacaaaaacatttaaaactatttttctctct 43950438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 404
Target Start/End: Original strand, 40965090 - 40965188
Alignment:
Q  308 catcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    ||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||        |||| |||||||||||| |||||||| ||||||||    
T  40965090 catcaatacttaacaaatgcacttaaaactatttttctctctccttcatttatacatttttcttaatacgtgtgaaatgagattttggcttagttaatc 40965188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 349
Target Start/End: Original strand, 10818616 - 10818738
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||||   |||||||||| | |||| |||| |||||||||||||||||| ||| | ||||||||| ||||||||||||| ||    
T  10818616 ccctttataactctaattaatatcactttcatcactcctaattcaatacatttcactttgcatttatgatactagagaatgcaccaatacttaacaagag 10818715  T
Q  327 cacttaaaactatttttctctct 349  Q
      | |||||| ||||||||||||    
T  10818716 tgcataaaaccatttttctctct 10818738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 2756683 - 2756792
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | ||| |||||||||||||||||||||||  ||||| ||||||| ||| |||  ||||||  ||||||| |||| |||||||||||  |||    
T  2756683 aattaatactatttacatcacttccaatttaatatattctactttacatttatgataatggtaaatgcactaatacttgacaagagcacttaaaataatt 2756782  T
Q  341 tttctctctt 350  Q
    ||||||||||    
T  2756783 tttctctctt 2756792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 349
Target Start/End: Complemental strand, 20027235 - 20027139
Alignment:
Q  254 ttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcactt-aaaactatttttctctct 349  Q
    |||||||||||||||| |||||  | ||||||| |||||| ||| ||| ||||||| |||||||| |||||| ||||| ||||||||||||||||||    
T  20027235 ttcatcacttccaattcaatatcctccactttgtatttatgataatggtgaatgcagcaatacttgacaaaaacacttaaaaactatttttctctct 20027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 39095630 - 39095717
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt 318  Q
    |||||| || ||||||||||  ||||||||||  ||||| |||||||| |||||||||||||| ||| ||||||||| ||||||||||    
T  39095630 ttataactttaattaatattactttcatcactgacaattcaatatattccactttgcatttatgataatggagaatgtatcaatactt 39095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 361
Target Start/End: Complemental strand, 44534561 - 44534459
Alignment:
Q  261 cttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaa--ctatttttctctctttcatttat 358  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||||| | ||||||||||||| | || ||||||   | ||||||| || |||||||||    
T  44534561 cttccaattcaatatattccactttgcatttatgatagtggagaatgtaccaatacttaacaagaacatttaaaatcatttttttctgtccttcatttat 44534462  T
Q  359 aca 361  Q
    |||    
T  44534461 aca 44534459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 565137 - 565202
Alignment:
Q  280 cactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttct 345  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||  ||||||||    
T  565137 cactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaatcatttttct 565202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 387
Target Start/End: Original strand, 28526973 - 28527121
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaac--ta 338  Q
    ||||||||||  |||||  |||||||||| |||||| | |||||| ||| |||  ||||| ||||||||  |||||||||||| ||||||||||||  |     
T  28526973 aattaatattactttcacaacttccaattcaatatagtccactttacatatatggtagtgaagaatgcacgaatacttaacaagagcacttaaaaccatt 28527072  T
Q  339 tttttctctctttcatttatacannnnnnnnaatatgtgtgaaatgagc 387  Q
    ||||| |||| ||||||||||||        ||||||||||||||||||    
T  28527073 tttttttctccttcatttatacatttttcttaatatgtgtgaaatgagc 28527121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 361
Target Start/End: Complemental strand, 31546086 - 31545994
Alignment:
Q  271 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttc--tctctttcatttataca 361  Q
    |||||||| |||||||||||| | |||||||||| |||||||||| ||||||| | |||||||||| | |||||  |||| ||||||||||||    
T  31546086 aatatattccactttgcatttgtgatagtggagagtgcatcaatatttaacaagatcacttaaaaccacttttccttctccttcatttataca 31545994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 347
Target Start/End: Complemental strand, 36396531 - 36396450
Alignment:
Q  266 aatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctct 347  Q
    |||||||||||||  ||||||||||||| | |||||||||||||  |||||| | ||| |||||||||||| ||||||||||    
T  36396531 aatttaatatattatactttgcatttatgacagtggagaatgcactaatactcatcaagagcacttaaaaccatttttctct 36396450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 4794594 - 4794690
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||||||| ||||| |||||||| |||||||||||||| ||| |  | |||||||||||| || |||| | |||| |||| ||||||| |||||    
T  4794594 tttcatcactttcaattcaatatattccactttgcatttatgataataaaaaatgcatcaatatttgacaagaacactcaaaattatttttttctct 4794690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 8550728 - 8550632
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||||||   |||| ||||||||  ||||||||||||| ||| |||||||||||  ||||||| |||| | |||||||||| | ||||||||||    
T  8550728 tttcatcactcttaattcaatatattagactttgcatttatgataatggagaatgcacaaatacttgacaagaacacttaaaaccacttttctctct 8550632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 36103387 - 36103291
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    ||||||||||   |||| |||||||| || |||  ||| || ||||||||||||||||| ||||||||||| | |||||||||  ||||||||||||    
T  36103387 tttcatcactctgaattcaatatattccattttatattcatgatagtggagaatgcatcgatacttaacaagaacacttaaaatcatttttctctct 36103291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 350
Target Start/End: Original strand, 26273758 - 26273877
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    |||||| || |||||||| |  |||||||||| |||||| ||||||||  ||||||||||||| ||| ||   |||| ||||||| |||| || |||| |    
T  26273758 ttataaatttaattaatactactttcatcactcccaattcaatatattctactttgcatttatgataatgataaatgtatcaatatttaaaaagagcaat 26273857  T
Q  331 taaaactatttttctctctt 350  Q
    ||||| ||||||| ||||||    
T  26273858 taaaattatttttatctctt 26273877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 361
Target Start/End: Complemental strand, 33602292 - 33602202
Alignment:
Q  273 tatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttct--ctctttcatttataca 361  Q
    |||||| |||||||||||||| || ||| ||||||||  ||||| |||||| |||||||||||| |||||| |  |||||| |||||||||    
T  33602292 tatattccactttgcatttatgatggtgaagaatgcactaatacataacaagagcacttaaaaccattttttttcctcttttatttataca 33602202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 359
Target Start/End: Complemental strand, 1908592 - 1908472
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag-cacttaaaactat 339  Q
    |||||||||| |||||| ||||||||||| ||||||||  ||||| ||||||| |||  | ||||||||  |||||||  |||||| |||| ||||| ||    
T  1908592 aattaatattattttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcactaatactt-gcaaaagacactcaaaaccat 1908494  T
Q  340 ttttctctc--tttcatttata 359  Q
    |||||||||  |||||||||||    
T  1908493 ttttctctctatttcatttata 1908472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 3487403 - 3487493
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcactt 331  Q
    ||||||||||  ||||||||||  ||||| ||||||||  ||||||||||| ||||| |||  ||||||||||||||| | |||| |||||    
T  3487403 aattaatattactttcatcactctcaattcaatatattctactttgcatttgtaataatggtaaatgcatcaatacttgataaaaacactt 3487493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 7648978 - 7648912
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 293  Q
    ||||||||||||  |||||||| | ||||||||||| |||||| |||||||||||| || |||||||    
T  7648978 ccctttataattctaattaatactattttcatcactcccaattcaatatatttcacattacatttat 7648912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 349
Target Start/End: Original strand, 31592549 - 31592666
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    |||||| || |||||||||| |||||||||||  ||||| ||||||||  |||||| |||||| |||    |||||||| |||||||| |||| | ||||    
T  31592549 ttataactttaattaatattattttcatcactctcaattcaatatattctactttgtatttatgataagaaagaatgcagcaatacttgacaaga-cact 31592647  T
Q  331 taaaactatttttctctct 349  Q
      |||||||||||||||||    
T  31592648 cgaaactatttttctctct 31592666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 359
Target Start/End: Complemental strand, 10069671 - 10069563
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctt 350  Q
    ||||||||||  ||||| ||||||||  ||||||||||||| ||| |||  ||||||  ||||||| ||||||| ||||||||  |||||  ||||||||    
T  10069671 tttcatcactctcaattcaatatattcgactttgcatttatgataatggtaaatgcacaaatacttgacaaaagtacttaaaatcatttttatctctctt 10069572  T
Q  351 tcatttata 359  Q
    ||| |||||    
T  10069571 tcacttata 10069563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 43427172 - 43427063
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactta-acaaaagcacttaaaactatttttctctcttt 351  Q
    |||||||||| |||||| ||||||||  | ||||||||||| |||  | ||||||||  |||| ||  ||||  ||||| ||| ||||||||||||||||    
T  43427172 tttcatcactcccaattcaatatattctattttgcatttatgataaagaagaatgcactaatagtttcacaagggcactcaaacctatttttctctcttt 43427073  T
Q  352 catttataca 361  Q
    ||||||||||    
T  43427072 catttataca 43427063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 351
Target Start/End: Original strand, 5711048 - 5711116
Alignment:
Q  283 tttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctcttt 351  Q
    |||| |||||| |||||| | ||| ||||||||  ||||||||||| |||||||||||||||| |||||    
T  5711048 tttgtatttatgatagtgaaaaatacatcaatatgtaacaaaagcatttaaaactatttttctttcttt 5711116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 13222077 - 13222129
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 293  Q
    ||||||||||  ||||| ||||||||||| ||||||||| |||||||||||||    
T  13222077 aattaatattactttcaccacttccaattcaatatattttactttgcatttat 13222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 19515902 - 19515996
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||| |||| ||||| ||||||||| ||||||||||||| ||| || | |||| | |||||||| |||| | ||| |||||||||||||||||||    
T  19515902 tttcattacttacaattcaatatattttactttgcatttatgataatgaaaaatgaaccaatacttgacaaga-cac-taaaactatttttctctct 19515996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 44194597 - 44194637
Alignment:
Q  173 taaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  44194597 taaaataactgaatcatttcacttttcaatacaatattaat 44194637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 7213508 - 7213606
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctc--tttcatttataca 361  Q
    ||||| |||||||| |||||| |||||||||||  | |||||||| ||||| || | ||| ||||| ||||  |||||||||||  |||||||||||||    
T  7213508 caattcaatatattccactttacatttataataaagaagaatgcaccaatatttgataaaggcactcaaaatcatttttctctctatttcatttataca 7213606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 42881438 - 42881399
Alignment:
Q  174 aaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  42881438 aaaataactgaatcatttcacttttcaatacaatattaat 42881399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 361
Target Start/End: Original strand, 43182273 - 43182403
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    |||||| || |||||||| | |||||| ||||||||||| ||||||||  ||  | |||||||||||  | |||||||| ||||| || |||||  ||||    
T  43182273 ttataactttaattaatactattttcaccacttccaattcaatatattatac--tacatttataataaagaagaatgcaccaatatttgacaaagacact 43182370  T
Q  331 taaaacta--tttttctctctttcatttataca 361  Q
     |||| ||  |||||||||||||| ||||||||    
T  43182371 caaaattatttttttctctctttcctttataca 43182403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 8385020 - 8385061
Alignment:
Q  172 ctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    ||||||||| ||| || |||||||||||||||||||||||||    
T  8385020 ctaaaataattgacttatttcacttttcaatacaatattaat 8385061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 386
Target Start/End: Original strand, 9724910 - 9725034
Alignment:
Q  264 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctc--tctttcatttataca 361  Q
    |||||| ||||||||  ||||| ||||||| |||  | |||||||| |||||||| | ||||||||| ||||  |||| ||||  |||||||||||||||    
T  9724910 ccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaagcactcaaaatcatttctctctctctttcatttataca 9725009  T
Q  362 nnnnnnnnaatatgtgtgaaatgag 386  Q
            |||||||||||||||||    
T  9725010 cttttcttaatatgtgtgaaatgag 9725034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 24356143 - 24356228
Alignment:
Q  264 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||| || |||||  ||||| ||||||| |||  | ||||||||||||||||| | ||| ||||| ||||||| ||||||||||    
T  24356143 ccaattcaacatattctactttacatttatgataaagaagaatgcatcaatacttgaaaaaggcactcaaaactagttttctctct 24356228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 33602395 - 33602354
Alignment:
Q  172 ctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||||  | |||||||||||||||||||||||||    
T  33602395 ctaaaataactgatctatttcacttttcaatacaatattaat 33602354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 33755296 - 33755388
Alignment:
Q  271 aatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttataca 361  Q
    |||||||| || ||||||||||| ||||   |||||  | ||||||||||||| | |||||||||  ||||||||||||  ||||||||||||    
T  33755296 aatatattccattttgcatttatgatagaaaagaatagaccaatacttaacaataacacttaaaatcatttttctctctccttcatttataca 33755388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 361
Target Start/End: Original strand, 36155580 - 36155644
Alignment:
Q  299 tggagaatgcatcaatacttaacaaaagcacttaaaa--ctatttttctctctttcatttataca 361  Q
    |||||||| || ||||||||||||| |||||||||||   | |||||||||| ||||||||||||    
T  36155580 tggagaatacaccaatacttaacaagagcacttaaaatcatttttttctctccttcatttataca 36155644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 361
Target Start/End: Original strand, 314455 - 314558
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctttcattta 357  Q
    |||| ||||| ||||||||  ||||||||||||| |||  | |||||||||||||| || | ||  ||||| ||||| |||||  ||||||||||| |||    
T  314455 actttcaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttgataagggcactcaaaaccattttcctctctctttcactta 314554  T
Q  358 taca 361  Q
    ||||    
T  314555 taca 314558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 18181380 - 18181336
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    ||||||||||||||||    |||||||||||||||||||||||||    
T  18181380 gtcctaaaataactgacccatttcacttttcaatacaatattaat 18181336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 28526909 - 28526949
Alignment:
Q  173 taaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    ||||||||||||||  ||||||||||||||| |||||||||    
T  28526909 taaaataactgaatcatttcacttttcaatataatattaat 28526949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 28572152 - 28572196
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  28572152 gtcccaaaataactgagtcatttcacttttcaatacaatattaat 28572196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 345
Target Start/End: Original strand, 39547802 - 39547905
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||||| ||||||||||||  |||| ||||||||||| ||| ||||||| ||| |||  |||| ||||||| || |||| |   ||||||| ||||    
T  39547802 aattaatattattttcatcacttttaatt-aatatatttcaatttacatttatgataatggtaaatgaatcaatagttgacaagaaaccttaaaattatt 39547900  T
Q  341 tttct 345  Q
    |||||    
T  39547901 tttct 39547905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 228 - 361
Target Start/End: Original strand, 31265775 - 31265910
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  ||||||||||  |||||  |||||||||| |||||||| |||||| ||||||| ||||||||||||||| ||||||||||||| |||    
T  31265775 cctttataactctaattaatattactttcacaacttccaattcaatatattccactttacatttatgatagtggagaatgcaccaatacttaacaagagc 31265874  T
Q  328 acttaaaactatttttctctct--ttcatttataca 361  Q
    ||||||||||||||||||||||  ||||||||||||    
T  31265875 acttaaaactatttttctctctccttcatttataca 31265910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 169 - 361
Target Start/End: Complemental strand, 30064115 - 30063925
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 268  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||  |||        |||||||||| |  ||||||||||  |||||||||| |||||    
T  30064115 gtcctaaaataactgagtcatttcactttccaatacaatattaat--tactttttt--ccctttataactctaattaatattactttcatcactcccaat 30064020  T
Q  269 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttc--tctctttcatttataca 361  Q
    | |||||||| ||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||| ||||||  |||| ||||||||||||    
T  30064019 tcaatatattccactttgcatttataatagtggagaatacacaaatacttaataaaagcacttaaaactttttttctttctccttcatttataca 30063925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 169 - 349
Target Start/End: Complemental strand, 3604766 - 3604590
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 268  Q
    |||||||||||||||| |  |||||||||||||||||||||||||  |          |||||||||| |  ||||||||||  |||||  |||||||||    
T  3604766 gtcctaaaataactgagtcatttcacttttcaatacaatattaattat----ttttttccctttataactctaattaatattactttcacaacttccaat 3604671  T
Q  269 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    | |||||||| ||||||||||||| |||| ||||||||||| ||||||||||||| || ||||||||| ||||||||||||    
T  3604670 tcaatatattccactttgcatttacaataatggagaatgcaccaatacttaacaagagaacttaaaaccatttttctctct 3604590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 260 - 361
Target Start/End: Original strand, 4238449 - 4238550
Alignment:
Q  260 acttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctctttcatttata 359  Q
    |||| ||||| |||| |||||||||| ||||||| |||||| |||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  4238449 actttcaattcaatagatttcactttacatttatgatagtgaagaatgcaccaatacttaacaagagcacttaaaactatatttctctctttcatttata 4238548  T
Q  360 ca 361  Q
    ||    
T  4238549 ca 4238550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 227 - 413
Target Start/End: Complemental strand, 7301192 - 7301006
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  || |||||||  |||||||| || ||||| |||||||| |||||| ||||||| ||| |||||||||||  |||||||||||||      
T  7301192 ccctttataactctaactaatattactttcatcattttcaattcaatatattccactttacatttatgataatggagaatgcacaaatacttaacaaaca 7301093  T
Q  327 cacttaaaactatttttctctctttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctgatacgga 413  Q
    |||||||||||||||||||||| || |||||||||        |||| ||||||||| |||||||| ||| ||||||| || |||||    
T  7301092 cacttaaaactatttttctctcatttatttatacatttttcttaatacgtgtgaaataagcttttgcctcggttaatccgagacgga 7301006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 169 - 404
Target Start/End: Original strand, 15081364 - 15081597
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaatagtacnnnnnnnnccctttataatttcaattaatattgttttcatcacttccaat 268  Q
    |||| ||||||||||||   |||||||||||||||||||||||||  |||        |||||||||| |  |||||||| |  |||||| | |||||||    
T  15081364 gtcccaaaataactgaacaatttcacttttcaatacaatattaat--tactttttt--ccctttataactctaattaatactactttcataatttccaat 15081459  T
Q  269 ttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctct--ctttcatttatacannnnn 366  Q
    | |||||||| |||||| | ||||| |||||||||||||||  ||||||||||||  ||||||||||||||||||||||  | ||||||||||||         
T  15081460 tcaatatattccactttacgtttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactatttttctctcaccttcatttatacattttt 15081559  T
Q  367 nnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
       |||| ||||||||||||||||||  ||||||||||    
T  15081560 cttaatacgtgtgaaatgagcttttgcttcagttaatc 15081597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 345
Target Start/End: Complemental strand, 14306339 - 14306235
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | | |||||||||  |||||||||| |||||||||| ||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  14306339 aattaataatatgttcatcactctcaatttaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatt 14306240  T
Q  341 tttct 345  Q
    |||||    
T  14306239 tttct 14306235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 228 - 422
Target Start/End: Complemental strand, 9755258 - 9755062
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagc 327  Q
    ||||||||| |  |||||||||| ||||||||| || ||||| ||||||||  ||| | ||||||| ||||||||||||| | ||||||||||||   |     
T  9755258 cctttataactgtaattaatattattttcatcattttcaattcaatatattctactctacatttatgatagtggagaatgtaccaatacttaacacgtga 9755159  T
Q  328 acttaaaactatttttctctct--ttcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctgatacggaaagagtatt 422  Q
    ||||||||||||||||||||||  |||||||||| |        |||| |||||||||||  |||||||||| |||||| || |||||  |||||||    
T  9755158 acttaaaactatttttctctcttcttcatttatatatttttcttaatacgtgtgaaatgaatttttggctcatttaatccgagacggagggagtatt 9755062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 241 - 345
Target Start/End: Complemental strand, 14312746 - 14312642
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    |||||||| | | |||||||||  ||||| |||| |||||||||| ||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  14312746 aattaataatatgttcatcactctcaattcaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaaccatt 14312647  T
Q  341 tttct 345  Q
    |||||    
T  14312646 tttct 14312642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 350
Target Start/End: Original strand, 2657901 - 2658019
Alignment:
Q  232 tataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcactt 331  Q
    |||||||  ||||||||||  ||||||||||||||||| ||||||||||||||| |||| ||  || | |||||  || |||||||||||||||| ||||    
T  2657901 tataattctaattaatattactttcatcacttccaattcaatatatttcactttacattaatggtactagagaagacaccaatacttaacaaaagtactt 2658000  T
Q  332 aaaactatttttctctctt 350  Q
    ||||  |||||||||||||    
T  2658001 aaaatcatttttctctctt 2658019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 404
Target Start/End: Original strand, 33109406 - 33109547
Alignment:
Q  265 caatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatacan 362  Q
    ||||| ||||||||||| ||| |||| |  |||||||||||||||  |||| |||||||  ||| ||||||||||||||||||||  ||||| ||||||     
T  33109406 caattcaatatatttcattttacattaacgatagtggagaatgcacaaatatttaacaagtgcatttaaaactatttttctctctcattcatctatacat 33109505  T
Q  363 nnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
           |||| |||||||||||||||||| |||||||||||    
T  33109506 ttttcttaatacgtgtgaaatgagcttttgactcagttaatc 33109547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 7167758 - 7167842
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaa 325  Q
    |||||||||| |||| ||||||||||||| || |||||| |||||||||| || ||| || | ||||||||||||||||||||||    
T  7167758 aattaatattttttttatcacttccaattcaacatattttactttgcattcatgataatgtaaaatgcatcaatacttaacaaaa 7167842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 281 - 361
Target Start/End: Complemental strand, 7739576 - 7739494
Alignment:
Q  281 actttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttc--tctctttcatttataca 361  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||| || || ||||||||||||  ||||||||| |||||||    
T  7739576 actttacatttataataatggtgaatgcatcaatacttaacaaaaacattttaaactatttttctatctctttcacttataca 7739494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 34915886 - 34915803
Alignment:
Q  266 aatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||| |||||||| |||||||||||||| ||| ||||||||||| |||||||||||  || |||||||||  |||| |||||||    
T  34915886 aattcaatatattccactttgcatttatgataatggagaatgcaccaatacttaacgtaaacacttaaaatcatttctctctct 34915803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 359
Target Start/End: Original strand, 31723493 - 31723621
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcact 330  Q
    ||||||||  |||||||||| ||||||| | |  ||||| |||||||| || |||  |||||| ||  |  ||||||||| ||||||| | |||| ||||    
T  31723493 ttataattataattaatattattttcattattctcaattcaatatattccaatttatatttatgatgataaagaatgcattaatacttgataaaaacact 31723592  T
Q  331 taaaactatttttctctctttcatttata 359  Q
    ||||||||||||| ||||||| |||||||    
T  31723593 taaaactatttttttctcttttatttata 31723621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 26356268 - 26356330
Alignment:
Q  231 ttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 293  Q
    |||||| || |||||||| |  |||||||||||| |||| |||||||||||||||||||||||    
T  26356268 ttataactttaattaatactactttcatcacttctaattcaatatatttcactttgcatttat 26356330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 117100 - 117193
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctc 346  Q
    ||||||||||  ||||| |||||||| ||||||| |||||| ||  ||||||||||| ||||  ||||||| ||  |||||||| |||||||||    
T  117100 tttcatcactctcaattcaatatattccactttgtatttatgatcatggagaatgcaccaatttttaacaagagtccttaaaaccatttttctc 117193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 16126220 - 16126272
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttat 293  Q
    |||||||||| |||||||| ||||||||| ||||||||  |||||||||||||    
T  16126220 aattaatattattttcatctcttccaattcaatatattatactttgcatttat 16126272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 361
Target Start/End: Original strand, 4611336 - 4611399
Alignment:
Q  299 tggagaatgcatcaatacttaacaaaagcacttaaaactatttt-tctctctttcatttataca 361  Q
    |||| |||||| |||||||||||||||||||||||||  ||||| ||| || ||||||||||||    
T  4611336 tggaaaatgcaccaatacttaacaaaagcacttaaaatcattttctctatccttcatttataca 4611399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 8569837 - 8569787
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcattt 291  Q
    ||||||||||  ||||| ||||  |||||||||||||||||||||||||||    
T  8569837 aattaatattactttcaccactctcaatttaatatatttcactttgcattt 8569787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 8569702 - 8569634
Alignment:
Q  274 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttct 345  Q
    |||||||||||||||||||| ||||||| |||| || ||||||   |||||| |||||||||  ||||||||    
T  8569702 atatttcactttgcatttatgatagtggtgaatacaccaatac---acaaaaacacttaaaatcatttttct 8569634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 349
Target Start/End: Complemental strand, 33921544 - 33921459
Alignment:
Q  264 ccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct 349  Q
    |||||| ||||||||  ||||| ||||||| |||  | |||||| | ||||||||||||||  |||| ||||| ||||||||||||    
T  33921544 ccaattcaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaacacactcaaaaccatttttctctct 33921459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 7359184 - 7359228
Alignment:
Q  169 gtcctaaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||| ||||||||||||   |||||||||||||||||||||||||    
T  7359184 gtcccaaaataactgaaccatttcacttttcaatacaatattaat 7359228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 20383784 - 20383824
Alignment:
Q  173 taaaataactgaattgtttcacttttcaatacaatattaat 213  Q
    |||||||||||| || |||||||||| ||||||||||||||    
T  20383784 taaaataactgacttatttcactttttaatacaatattaat 20383824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 28539017 - 28539061
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataata 297  Q
    |||||||||||  |||||||||||||  |||||||||||||||||    
T  28539017 tttcatcacttttaatttaatatattctactttgcatttataata 28539061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 98820 - 98956
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||||| |||||||||||  ||||| |||||||| ||||||  |||||| || ||||| |||||| ||||||||| ||| ||    
T  98820 ccctttataactctaattaatattattttcatcactctcaattcaatatattccactttatatttattatggtggataatgcaccaatacttatcaagag 98919  T
Q  327 cacttaaaactatttttctctct--ttcatttataca 361  Q
    |||||||||  ||||||||||||  ||||||||||||    
T  98920 cacttaaaatcatttttctctctcattcatttataca 98956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 229818 - 229953
Alignment:
Q  227 ccctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaag 326  Q
    |||||||||| |  |||||||| |  |||||  |||||||||| |||||||  |||||||||||||| ||| ||||||||||| ||||||||||||| ||    
T  229818 ccctttataactctaattaatactactttcacaacttccaattcaatatataccactttgcatttatgataatggagaatgcaccaatacttaacaagag 229917  T
Q  327 cacttaaaactatttttc--tctctttcatttataca 361  Q
    |||||||||| |||||||  |||| ||||||||||||    
T  229918 cacttaaaac-atttttctatctccttcatttataca 229953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 404
Target Start/End: Original strand, 14477 - 14630
Alignment:
Q  253 tttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt--tctctctt 350  Q
    |||||||| || ||||| |||||||| |||||| ||||||| | ||||||||||||||||||||||| |||  ||| |||||||||||||  |||| | |    
T  14477 tttcatcattttcaattcaatatattccactttacatttatgacagtggagaatgcatcaatacttagcaagtgcaattaaaactatttttatctcccct 14576  T
Q  351 tcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatc 404  Q
    |||||||||||        |||| ||||||||| ||||||||  ||||||||||    
T  14577 tcatttatacatttttcttaatacgtgtgaaataagcttttgattcagttaatc 14630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 9617 - 9529
Alignment:
Q  274 atatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttttctctct--ttcatttatac 360  Q
    ||||| |||||||||||||| ||| |||||||| ||| |||||||||||| |||||||||||| ||||||||||||  |||||||||||    
T  9617 atattccactttgcatttatgataatggagaatacattaatacttaacaagagcacttaaaaccatttttctctctccttcatttatac 9529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 406
Target Start/End: Original strand, 8949 - 9042
Alignment:
Q  315 acttaacaaaagcacttaaaactatttttctctctt--tcatttatacannnnnnnnaatatgtgtgaaatgagcttttggctcagttaatctg 406  Q
    ||||||||||| ||||||||| ||||||||||||||  |||||||||||        ||||||||||||||||||||||||||||||| |||||    
T  8949 acttaacaaaaacacttaaaattatttttctctcttcttcatttatacatttttcttaatatgtgtgaaatgagcttttggctcagtttatctg 9042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 8883 - 8977
Alignment:
Q  228 cctttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaaca 322  Q
    ||||||||| |  ||||||||||  |||||||| |  ||||| |||||||| |||||||||||||||||||||||||||||| |||||| |||||    
T  8883 cctttataactctaattaatattactttcatcattctcaattcaatatattccactttgcatttataatagtggagaatgcaccaatacataaca 8977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 361
Target Start/End: Complemental strand, 352557 - 352439
Alignment:
Q  243 ttaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatttt 342  Q
    ||||||||  |||||  ||| |||||| ||||||||  ||||| ||||||| |||  | |||||||| ||||||||||||||  |||| |||| ||||||    
T  352557 ttaatattactttcactactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaagacactcaaaattatttt 352458  T
Q  343 tctctctttcatttataca 361  Q
    ||||||||| |||||||||    
T  352457 tctctcttttatttataca 352439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 321
Target Start/End: Original strand, 26611 - 26702
Alignment:
Q  230 tttataatttcaattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaac 321  Q
    |||||||||  |||||||| |  ||||||||||  ||||| |||||||| |||||||||||||| ||||||||||||  | |||||||||||    
T  26611 tttataattctaattaatactactttcatcactcgcaattcaatatattccactttgcatttatgatagtggagaatagaccaatacttaac 26702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 230265 - 230387
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatacttaacaaaagcacttaaaactatt 340  Q
    ||||||||||  |||||  |||||||||| |||||||| || ||||||||||| |||   ||||||| | | || |||||||| |  ||||||||| |||    
T  230265 aattaatattactttcacaacttccaattcaatatattccattttgcatttatgataacagagaatgtacccatgcttaacaagaatacttaaaaccatt 230364  T
Q  341 tttctctct--ttcatttataca 361  Q
    |||||||||  ||||||||||||    
T  230365 tttctctcttcttcatttataca 230387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 6498 - 6421
Alignment:
Q  241 aattaatattgttttcatcacttccaatttaatatatttcactttgcatttataatagtggagaatgcatcaatactt 318  Q
    ||||||||||  ||||| ||||  ||||| ||||||||| ||||| ||||||| |||  | |||||||||||||||||    
T  6498 aattaatattactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgcatcaatactt 6421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 4788 times since January 2019
Visitors: 5752