View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0790_low_32 (Length: 320)
Name: NF0790_low_32
Description: NF0790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0790_low_32 |
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Alignment Details
Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 13416567 - 13416690
Alignment:
| Q |
100 |
gtgttgaatctatttctgttggaatgtgaacatctttgtattctttctattgaattgtatgagaaggacttgtaagattgtatgaatatacattcaagga |
199 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13416567 |
gtgttgaatctattgctgttggaatgtgaacatctttgtattctttctattgaattgtatgagaaggacttgtaagattgtatgaatatacattcaagga |
13416666 |
T |
|
| Q |
200 |
ggatagatgacattggtagggtct |
223 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
13416667 |
ggatagatgacattggtagggtct |
13416690 |
T |
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