View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0790_low_35 (Length: 318)
Name: NF0790_low_35
Description: NF0790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0790_low_35 |
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Alignment Details
Target: chr3 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 46263629 - 46263775
Alignment:
| Q |
97 |
aaagtgacatgtgtaaaacacaattataacaagagcatacactggtccaaagaaatatcaattgaatcagtttgatcgttcctaaagataccattttgct |
196 |
Q |
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| T |
46263629 |
aaagtgacatgtgtaaaacacaattataacaagagcatacactggtccaaagaaatatcaattgaatcagtttgatcgttcctaaagataccattttgct |
46263728 |
T |
|
| Q |
197 |
ccgtcccgttggcagcacttggtgctttttccaaagctttctccagt |
243 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46263729 |
ccatcccgttggcagcacttggtgctttttccaaagctttctccagt |
46263775 |
T |
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