View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0790_low_36 (Length: 318)
Name: NF0790_low_36
Description: NF0790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0790_low_36 |
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Alignment Details
Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 48023399 - 48023517
Alignment:
| Q |
92 |
ctgtgtcttattcagattcaggtacaagtagagcaagaacatattgtgtggaagctccttgtctagattgattagaattagttgcaatgcaacaatttcc |
191 |
Q |
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| T |
48023399 |
ctgtgtcttattcagattcaggtacaagtagagcaagaacatattgtgtggaagctccttgtctagattgattagaattagttgcaatgcaacaatttcc |
48023498 |
T |
|
| Q |
192 |
caagagtggacatgaatga |
210 |
Q |
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||||||| ||||||||||| |
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| T |
48023499 |
caagagtagacatgaatga |
48023517 |
T |
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