View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0790_low_56 (Length: 213)
Name: NF0790_low_56
Description: NF0790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0790_low_56 |
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Alignment Details
Target: chr5 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 16193899 - 16193772
Alignment:
| Q |
1 |
catacatggaaaataaagatagctcaattaagagtagaaggaatcaatgcttctatgtctttggttctctctctaaaatgtacaagaagacaaattatta |
100 |
Q |
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| T |
16193899 |
catacatggaaaataaagatagctcaattaagagtagaaggaatcaatgcttctatgtttttggttctctctctaaaatgtataagaagacaaattatta |
16193800 |
T |
|
| Q |
101 |
gtggtgagaagagatgatgactagtatt |
128 |
Q |
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| T |
16193799 |
gtggtgagaagagatgatgactggtatt |
16193772 |
T |
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