View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0791-INSERTION-18 (Length: 310)

Name: NF0791-INSERTION-18
Description: NF0791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0791-INSERTION-18
NF0791-INSERTION-18
[»] chr1 (43 HSPs)
chr1 (9-307)||(5572616-5572922)
chr1 (63-231)||(35772075-35772242)
chr1 (63-231)||(26176954-26177121)
chr1 (70-214)||(4098292-4098434)
chr1 (63-191)||(30369881-30370007)
chr1 (68-231)||(35892107-35892269)
chr1 (61-231)||(27413391-27413560)
chr1 (71-214)||(2859516-2859657)
chr1 (63-203)||(33156779-33156918)
chr1 (62-231)||(38668170-38668338)
chr1 (85-231)||(38733219-38733360)
chr1 (63-232)||(51460312-51460480)
chr1 (63-231)||(4112877-4113044)
chr1 (68-230)||(25145592-25145753)
chr1 (63-229)||(31496244-31496409)
chr1 (61-113)||(51589850-51589902)
chr1 (122-227)||(369734-369841)
chr1 (63-114)||(3169812-3169863)
chr1 (63-214)||(12376562-12376711)
chr1 (63-113)||(29265999-29266049)
chr1 (63-213)||(39348242-39348390)
chr1 (123-231)||(25713262-25713371)
chr1 (84-164)||(32783220-32783298)
chr1 (126-232)||(39100453-39100560)
chr1 (158-231)||(8870795-8870869)
chr1 (63-113)||(51589272-51589322)
chr1 (63-116)||(8870895-8870948)
chr1 (137-214)||(12325421-12325497)
chr1 (123-231)||(17412436-17412545)
chr1 (123-230)||(7307825-7307933)
chr1 (137-231)||(16163051-16163145)
chr1 (63-102)||(17452678-17452717)
chr1 (65-108)||(51460043-51460086)
chr1 (63-110)||(51589038-51589085)
chr1 (63-113)||(17452816-17452866)
chr1 (62-100)||(42586440-42586478)
chr1 (63-116)||(9499291-9499344)
chr1 (63-100)||(25255357-25255394)
chr1 (63-100)||(26177189-26177226)
chr1 (63-100)||(35772310-35772347)
chr1 (63-100)||(40079198-40079235)
chr1 (68-100)||(20208230-20208262)
chr1 (68-100)||(20208529-20208561)
[»] chr4 (43 HSPs)
chr4 (63-231)||(35788705-35788872)
chr4 (63-229)||(35796850-35797015)
chr4 (63-231)||(22231179-22231346)
chr4 (82-230)||(28245633-28245780)
chr4 (63-228)||(50543439-50543605)
chr4 (71-206)||(35819025-35819158)
chr4 (63-231)||(40717312-40717479)
chr4 (63-230)||(6218250-6218416)
chr4 (123-231)||(27634187-27634296)
chr4 (63-113)||(53814917-53814967)
chr4 (63-116)||(12869248-12869301)
chr4 (63-116)||(17111609-17111662)
chr4 (137-231)||(5398581-5398676)
chr4 (63-113)||(14783175-14783225)
chr4 (63-113)||(25052898-25052948)
chr4 (63-206)||(52559613-52559756)
chr4 (123-231)||(5398317-5398425)
chr4 (123-222)||(12005587-12005689)
chr4 (61-113)||(53828511-53828563)
chr4 (141-231)||(6778549-6778640)
chr4 (63-113)||(1518210-1518260)
chr4 (71-113)||(9685452-9685494)
chr4 (63-113)||(21498400-21498450)
chr4 (56-154)||(26030351-26030448)
chr4 (136-186)||(26549541-26549591)
chr4 (63-113)||(50543318-50543368)
chr4 (63-100)||(9685678-9685715)
chr4 (147-203)||(1215883-1215939)
chr4 (63-214)||(4645688-4645837)
chr4 (61-113)||(52827466-52827518)
chr4 (61-100)||(21685042-21685081)
chr4 (71-118)||(52827408-52827455)
chr4 (61-100)||(53559291-53559330)
chr4 (63-100)||(21498841-21498878)
chr4 (63-100)||(22845448-22845485)
chr4 (63-100)||(22863520-22863557)
chr4 (63-100)||(35788940-35788977)
chr4 (68-113)||(40716609-40716654)
chr4 (55-100)||(41187933-41187978)
chr4 (63-100)||(54054806-54054843)
chr4 (61-113)||(4464339-4464391)
chr4 (137-213)||(13495581-13495657)
chr4 (63-206)||(43743035-43743171)
[»] chr3 (38 HSPs)
chr3 (63-231)||(4155370-4155537)
chr3 (63-214)||(13574809-13574959)
chr3 (63-227)||(20327724-20327887)
chr3 (63-231)||(35038300-35038466)
chr3 (63-230)||(16239637-16239804)
chr3 (63-231)||(31317274-31317444)
chr3 (63-203)||(20303285-20303423)
chr3 (63-192)||(8142558-8142685)
chr3 (126-227)||(20303174-20303276)
chr3 (63-116)||(16926934-16926987)
chr3 (137-231)||(34992724-34992819)
chr3 (63-113)||(1723064-1723114)
chr3 (63-113)||(11589831-11589881)
chr3 (67-113)||(21833398-21833444)
chr3 (174-232)||(29215694-29215752)
chr3 (63-113)||(54368562-54368612)
chr3 (63-113)||(54567938-54567988)
chr3 (63-112)||(9273007-9273056)
chr3 (147-231)||(39683374-39683459)
chr3 (123-231)||(19954324-19954432)
chr3 (61-116)||(17001406-17001461)
chr3 (63-100)||(39620372-39620409)
chr3 (69-113)||(17638286-17638330)
chr3 (136-231)||(52724092-52724188)
chr3 (63-110)||(12930119-12930166)
chr3 (70-116)||(27783111-27783157)
chr3 (158-216)||(29575792-29575850)
chr3 (63-113)||(45138959-45139009)
chr3 (63-104)||(20327611-20327652)
chr3 (71-112)||(22729154-22729195)
chr3 (63-100)||(24866243-24866280)
chr3 (63-100)||(35038195-35038232)
chr3 (72-113)||(39620147-39620188)
chr3 (63-100)||(47702410-47702447)
chr3 (63-100)||(50052540-50052577)
chr3 (63-99)||(13574686-13574722)
chr3 (61-113)||(15019504-15019556)
chr3 (63-213)||(49629651-49629800)
[»] chr2 (39 HSPs)
chr2 (63-231)||(15124654-15124821)
chr2 (73-230)||(40149110-40149264)
chr2 (63-231)||(40379315-40379482)
chr2 (63-231)||(16533358-16533525)
chr2 (63-231)||(5711545-5711713)
chr2 (63-231)||(2029815-2029982)
chr2 (63-231)||(16419313-16419480)
chr2 (63-229)||(14466283-14466448)
chr2 (63-231)||(93228-93392)
chr2 (63-231)||(33606160-33606327)
chr2 (123-231)||(37812374-37812483)
chr2 (63-168)||(93562-93665)
chr2 (63-116)||(21591828-21591881)
chr2 (123-230)||(44404033-44404142)
chr2 (123-230)||(19110347-19110455)
chr2 (63-114)||(10571016-10571067)
chr2 (63-113)||(2324286-2324336)
chr2 (63-113)||(5509125-5509175)
chr2 (137-230)||(17525206-17525300)
chr2 (63-113)||(28407781-28407831)
chr2 (63-230)||(36352033-36352197)
chr2 (63-108)||(10523065-10523110)
chr2 (63-116)||(27897591-27897644)
chr2 (61-113)||(24395907-24395959)
chr2 (63-102)||(5594286-5594325)
chr2 (70-113)||(27036403-27036446)
chr2 (63-102)||(30701124-30701163)
chr2 (123-205)||(18607142-18607224)
chr2 (63-113)||(21383658-21383708)
chr2 (63-113)||(29718374-29718424)
chr2 (71-214)||(33381077-33381221)
chr2 (63-100)||(5711440-5711477)
chr2 (63-100)||(8424934-8424971)
chr2 (63-100)||(16419548-16419585)
chr2 (63-100)||(17719612-17719649)
chr2 (63-116)||(17854914-17854967)
chr2 (63-100)||(19191611-19191648)
chr2 (63-100)||(40379210-40379247)
chr2 (60-100)||(13486377-13486417)
[»] chr5 (44 HSPs)
chr5 (63-231)||(41666863-41667031)
chr5 (63-227)||(18333575-18333737)
chr5 (61-226)||(24531643-24531807)
chr5 (63-231)||(15480368-15480535)
chr5 (63-231)||(24346607-24346775)
chr5 (76-230)||(95373-95526)
chr5 (63-231)||(24269976-24270143)
chr5 (63-231)||(32908824-32908990)
chr5 (63-231)||(9368641-9368808)
chr5 (123-231)||(13700696-13700805)
chr5 (63-229)||(25258174-25258339)
chr5 (63-229)||(25321964-25322129)
chr5 (68-231)||(43117698-43117859)
chr5 (68-229)||(17150341-17150501)
chr5 (71-231)||(6919300-6919459)
chr5 (63-113)||(8098363-8098413)
chr5 (63-154)||(2063683-2063772)
chr5 (147-231)||(17015982-17016066)
chr5 (63-192)||(6413568-6413695)
chr5 (137-230)||(15590056-15590150)
chr5 (63-113)||(21209909-21209959)
chr5 (71-113)||(24487633-24487675)
chr5 (63-231)||(24528586-24528753)
chr5 (138-226)||(38731714-38731803)
chr5 (165-231)||(8081220-8081287)
chr5 (138-228)||(20510751-20510841)
chr5 (141-231)||(33337344-33337435)
chr5 (68-118)||(1028381-1028431)
chr5 (63-113)||(8081101-8081151)
chr5 (72-113)||(17016385-17016426)
chr5 (70-109)||(13296725-13296764)
chr5 (165-231)||(18885373-18885440)
chr5 (55-110)||(20225079-20225134)
chr5 (63-113)||(1564555-1564605)
chr5 (55-113)||(26137333-26137391)
chr5 (158-231)||(30770155-30770229)
chr5 (175-231)||(17352540-17352597)
chr5 (63-100)||(21209709-21209746)
chr5 (63-100)||(25258095-25258132)
chr5 (63-100)||(25321885-25321922)
chr5 (63-100)||(27132994-27133031)
chr5 (63-100)||(28510137-28510174)
chr5 (63-100)||(41666758-41666795)
chr5 (68-116)||(6415594-6415642)
[»] chr6 (31 HSPs)
chr6 (63-231)||(13353247-13353414)
chr6 (63-231)||(33796372-33796539)
chr6 (63-231)||(4868683-4868851)
chr6 (63-230)||(6542815-6542981)
chr6 (71-231)||(12330050-12330209)
chr6 (63-231)||(33494585-33494752)
chr6 (126-231)||(17147766-17147872)
chr6 (55-231)||(3680050-3680224)
chr6 (136-230)||(6400727-6400822)
chr6 (63-231)||(9705066-9705232)
chr6 (71-192)||(6237618-6237737)
chr6 (63-113)||(8026435-8026485)
chr6 (63-113)||(30256858-30256908)
chr6 (56-116)||(8001535-8001595)
chr6 (62-114)||(20373615-20373667)
chr6 (63-113)||(27653263-27653313)
chr6 (63-113)||(30256624-30256674)
chr6 (73-186)||(2736318-2736430)
chr6 (61-110)||(21690766-21690815)
chr6 (123-231)||(31961047-31961156)
chr6 (63-230)||(24554163-24554327)
chr6 (63-102)||(8566958-8566997)
chr6 (123-214)||(33631694-33631785)
chr6 (63-100)||(4161847-4161884)
chr6 (63-100)||(4223467-4223504)
chr6 (63-100)||(4868578-4868615)
chr6 (68-113)||(5572604-5572649)
chr6 (63-100)||(8026650-8026687)
chr6 (63-100)||(11721951-11721988)
chr6 (63-112)||(15082133-15082182)
chr6 (63-99)||(5572386-5572422)
[»] chr8 (51 HSPs)
chr8 (71-229)||(20301315-20301472)
chr8 (71-229)||(21087947-21088104)
chr8 (70-231)||(41790711-41790871)
chr8 (63-231)||(11232300-11232467)
chr8 (63-231)||(39052800-39052967)
chr8 (63-231)||(5932055-5932222)
chr8 (63-231)||(20094666-20094832)
chr8 (70-231)||(31197668-31197825)
chr8 (63-230)||(3157431-3157597)
chr8 (123-231)||(18004202-18004309)
chr8 (137-231)||(39052643-39052738)
chr8 (137-230)||(3157116-3157210)
chr8 (137-231)||(39960075-39960169)
chr8 (72-231)||(8084182-8084340)
chr8 (63-192)||(15042795-15042924)
chr8 (60-214)||(10615437-10615589)
chr8 (123-229)||(35682889-35682996)
chr8 (63-113)||(19256808-19256858)
chr8 (61-222)||(422334-422493)
chr8 (60-113)||(12317089-12317142)
chr8 (61-189)||(8716158-8716285)
chr8 (162-214)||(42049575-42049627)
chr8 (137-231)||(5675840-5675935)
chr8 (70-113)||(10884117-10884160)
chr8 (69-112)||(28213093-28213136)
chr8 (63-113)||(4828114-4828164)
chr8 (63-113)||(11232182-11232232)
chr8 (63-113)||(17469864-17469914)
chr8 (63-113)||(24532409-24532459)
chr8 (63-113)||(34842724-34842774)
chr8 (63-113)||(36917427-36917477)
chr8 (71-112)||(5590357-5590398)
chr8 (63-100)||(22638180-22638217)
chr8 (61-102)||(39743573-39743614)
chr8 (84-214)||(5675945-5676073)
chr8 (63-113)||(10615144-10615194)
chr8 (63-113)||(16050075-16050125)
chr8 (63-113)||(26208237-26208287)
chr8 (63-113)||(37001272-37001322)
chr8 (123-231)||(12688176-12688285)
chr8 (63-100)||(19256587-19256624)
chr8 (63-100)||(24075307-24075344)
chr8 (63-100)||(27205010-27205047)
chr8 (63-100)||(27205108-27205145)
chr8 (63-100)||(27205206-27205243)
chr8 (63-100)||(34653196-34653233)
chr8 (63-100)||(35682782-35682819)
chr8 (63-100)||(37001510-37001547)
chr8 (63-100)||(39960238-39960275)
chr8 (63-100)||(42846606-42846643)
chr8 (64-116)||(29005911-29005963)
[»] chr7 (35 HSPs)
chr7 (63-231)||(25620182-25620349)
chr7 (63-231)||(29469651-29469818)
chr7 (68-231)||(1596644-1596806)
chr7 (63-231)||(2404280-2404446)
chr7 (55-230)||(36277098-36277272)
chr7 (63-229)||(21861340-21861505)
chr7 (63-231)||(33834237-33834404)
chr7 (63-231)||(33996185-33996349)
chr7 (63-230)||(4506978-4507142)
chr7 (71-214)||(4886383-4886524)
chr7 (137-230)||(31892270-31892364)
chr7 (137-231)||(40746139-40746233)
chr7 (140-231)||(3519831-3519923)
chr7 (63-118)||(40121907-40121962)
chr7 (73-203)||(48661455-48661583)
chr7 (63-113)||(31257255-31257305)
chr7 (84-229)||(36993182-36993325)
chr7 (61-154)||(44874527-44874618)
chr7 (68-113)||(10882227-10882272)
chr7 (61-113)||(21821850-21821902)
chr7 (63-113)||(6782907-6782957)
chr7 (63-113)||(17202225-17202275)
chr7 (63-113)||(34027439-34027489)
chr7 (55-100)||(43085538-43085583)
chr7 (63-111)||(2544437-2544485)
chr7 (61-113)||(40746309-40746361)
chr7 (85-192)||(20305358-20305467)
chr7 (137-214)||(3519928-3520005)
chr7 (76-113)||(6001658-6001695)
chr7 (68-113)||(26239904-26239949)
chr7 (63-116)||(26562058-26562111)
chr7 (55-100)||(43075311-43075356)
chr7 (63-116)||(48243422-48243475)
chr7 (61-113)||(23796011-23796063)
chr7 (68-100)||(43688161-43688193)
[»] scaffold0692 (1 HSPs)
scaffold0692 (69-214)||(5643-5786)
[»] scaffold0519 (1 HSPs)
scaffold0519 (63-231)||(1962-2129)
[»] scaffold0048 (1 HSPs)
scaffold0048 (63-231)||(81888-82054)
[»] scaffold0092 (1 HSPs)
scaffold0092 (63-225)||(5701-5862)
[»] scaffold0005 (1 HSPs)
scaffold0005 (63-113)||(56505-56555)
[»] scaffold0366 (2 HSPs)
scaffold0366 (123-230)||(14508-14617)
scaffold0366 (123-230)||(10842-10951)
[»] scaffold0729 (1 HSPs)
scaffold0729 (141-231)||(2616-2707)
[»] scaffold0129 (1 HSPs)
scaffold0129 (63-113)||(14349-14399)
[»] scaffold0459 (1 HSPs)
scaffold0459 (123-230)||(13201-13310)
[»] scaffold0181 (1 HSPs)
scaffold0181 (63-100)||(20985-21022)
[»] scaffold0211 (1 HSPs)
scaffold0211 (61-113)||(24622-24674)
[»] scaffold0481 (1 HSPs)
scaffold0481 (63-113)||(3459-3509)
[»] scaffold0766 (1 HSPs)
scaffold0766 (61-98)||(6318-6355)
[»] scaffold0400 (1 HSPs)
scaffold0400 (63-112)||(3891-3940)
[»] scaffold0365 (1 HSPs)
scaffold0365 (63-112)||(4535-4584)
[»] scaffold0045 (1 HSPs)
scaffold0045 (61-113)||(41194-41246)


Alignment Details
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 9 - 307
Target Start/End: Original strand, 5572616 - 5572922
Alignment:
Q  9 atttgtacgatcata-caaacatataaccttaaaacaatagtacctgcaagttgattttatggggttgtgttaagcccaaccacgatttctaaaatggta 107  Q
    ||||||||||||||| |||||| ||||||||||||||||||| || |||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  5572616 atttgtacgatcataacaaacaaataaccttaaaacaatagtccccgcaagttggttttgtggggttgtgttaagcccaactacgatttctaaaatggta 5572715  T
Q  108 tcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctga 207  Q
    | |||| || ||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||| ||||| | |||     
T  5572716 ttagagcctgtaattaagatccattagatcacctgctactagatttctgctatcaggccacacactatttatgtccacgaaccaatttcaataatactgg 5572815  T
Q  208 tcgtgagaggtgtgttaagagtccattgaaattacaatattatta--------gtgtgtcttctaaataaattaatttaacatctattgatatataacta 299  Q
    |||||||||||||||||||| |||| |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  5572816 tcgtgagaggtgtgttaagaatcca-tgaaattacaatattattattattagtgtgtgtcttctaaataaattaatttaacatctattgatatataacta 5572914  T
Q  300 cgtatgat 307  Q
    ||||||||    
T  5572915 cgtatgat 5572922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 35772075 - 35772242
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| |  |  | |||||||||| |  || |||||| |||||||| | ||||     
T  35772075 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcc--ttctcaagatccattgggccatctgctatcaggtttccgctatcg 35772172  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag-aggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  |||||||||| | | |||||  ||||||||||||||||    
T  35772173 ggccacccaccatttatgtccacgaaccaagcccaatagtgccggttgtgagcgggtgtgttaagagtcc 35772242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 26176954 - 26177121
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||| |||||||||| ||| |||||||| || |    |||||||||| |  ||||||||| ||| |||| | ||||     
T  26176954 ttttgtggggttgtgttaggcccaaccgcgatttctaagatgatatcagagcctctcc--aagatccattgggccacctgctatcagatttccgctatcg 26177051  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    | |||| ||| |||||| |||||||||||| ||||||||||||| |||||| | ||||||||||||||||    
T  26177052 gaccacccaccatttatatccacgaaccaagtccaatagtgctggtcgtgacggggtgtgttaagagtcc 26177121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 4098434 - 4098292
Alignment:
Q  70 gggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccaca 169  Q
    ||||||||||| |||||||||||||||||||  ||||||||||| || |  | |||||||||| |  ||||||| | |||||||||| |||| ||||||     
T  4098434 gggttgtgttaggcccaaccacgatttctaagttggtatcagagactct--tcaagatccattgggccacctgcaatcaggtttctgctatcgggccacc 4098337  T
Q  170 cactatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
    |||  ||||||||||||||||||  |||||| || || |||||||    
T  4098336 caccctttatgtccacgaaccaagcccaataatgttggtcgtgag 4098292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 30369881 - 30370007
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| || ||||||||| || |    |||||||||| | |||||||||| ||||||||   ||||     
T  30369881 ttttgtggggttgtgttaggcccaaccacgatttctaagattgtatcagagcctct--ccaagatccattgggtcacctgctatcaggtttccactatcg 30369978  T
Q  163 ggccacacactatttatgtccacgaacca 191  Q
    |||||| ||| ||||||||||||||||||    
T  30369979 ggccacccaccatttatgtccacgaacca 30370007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 231
Target Start/End: Original strand, 35892107 - 35892269
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggcca 167  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||||| |  | ||||| |||| |  ||| ||||| ||  |||||| |||| || ||    
T  35892107 tggggttgtgttaagcccatccacgatttctaagaaggtatcagagtctct--tcaagattcattgggccacttgctatcatatttctgctatcggggca 35892204  T
Q  168 cacactatttatgtccacgaaccaattccaatagtgctgatcgtgaga-ggtgtgttaagagtcc 231  Q
    | ||| |||||||||||||||  ||  ||||| |||||| |||||||| ||||||||||||||||    
T  35892205 cccaccatttatgtccacgaattaagcccaattgtgctggtcgtgagagggtgtgttaagagtcc 35892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 231
Target Start/End: Original strand, 27413391 - 27413560
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttat 160  Q
    |||||| || |||||||||| | ||||||||||||||||| ||| |||||||| || |    |||||| |||||| |||||| || ||| |||| | |||    
T  27413391 gattttgtgaggttgtgttaggtccaaccacgatttctaagatgatatcagagcctctcc--aagatctattagaccacctgttatcagatttccgctat 27413488  T
Q  161 caggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgaga-ggtgtgttaagagtcc 231  Q
    | |||||| ||| ||||||||||||||| |||  ||||||||| || |||||||| |||||||||| |||||    
T  27413489 cgggccacccaccatttatgtccacgaatcaagcccaatagtgttggtcgtgagagggtgtgttaaaagtcc 27413560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 2859657 - 2859516
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacac 170  Q
    ||||||||||  ||||||||  |||||||| ||||||| |||| || |  | |||||||||| |  ||||| |||  ||||||||| |||| |||||| |    
T  2859657 ggttgtgttagccccaaccatcatttctaagatggtattagagcctct--tcaagatccattgggccaccttctattaggtttctgctatcgggccaccc 2859560  T
Q  171 actatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
    || |||||||||||||||||||  |||||||||||| |||||||    
T  2859559 accatttatgtccacgaaccaagcccaatagtgctggtcgtgag 2859516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 33156779 - 33156918
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||| |||| |||     ||||||| || | |||||||||| |||||||| | ||||     
T  33156779 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtattagagccta-ctccaagatccgttggttcacctgctatcaggtttccgctatcg 33156877  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtg 203  Q
    |||||  ||| ||||||||||||||| |||  |||||||||    
T  33156878 ggccatccaccatttatgtccacgaatcaagcccaatagtg 33156918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 62 - 231
Target Start/End: Original strand, 38668170 - 38668338
Alignment:
Q  62 attttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatc 161  Q
    ||||| ||||||||||||| |||||| ||| |||||||| |||||||||||| || |    | |||||||| | ||||||| || |||||||||| ||||    
T  38668170 attttgtggggttgtgttaggcccaatcacaatttctaagatggtatcagagcctct--ccatgatccattgggtcacctgttatcaggtttctgctatc 38668267  T
Q  162 aggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag-aggtgtgttaagagtcc 231  Q
     || |||  |  ||||||||||| |||||||  |||||| ||||| |||||||  ||||||||||||||||    
T  38668268 gggtcacctatcatttatgtccatgaaccaagcccaatattgctggtcgtgagtgggtgtgttaagagtcc 38668338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 38733219 - 38733360
Alignment:
Q  85 caaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtcca 184  Q
    |||||||||||||||| ||||||||||||||| |    |||||||||| || ||||||||| |||||||| | ||||    ||| ||| |||||| || |    
T  38733219 caaccacgatttctaagatggtatcagagtctctcc--aagatccattggaccacctgctatcaggtttccgctatc----cacccaccatttatatcta 38733312  T
Q  185 cgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    ||||| ||  |||||||||||| |||||| ||||||||||||||||||    
T  38733313 cgaactaagcccaatagtgctggtcgtgaagaggtgtgttaagagtcc 38733360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 63 - 232
Target Start/End: Complemental strand, 51460480 - 51460312
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||  |||||||||||| |||||||| || |    |||||||||| |  ||||||||| |||||||| | ||||     
T  51460480 ttttgtggggttgtgttaggcccaaccataatttctaaaatgatatcagagcctctcc--aagatccattgggccacctgctatcaggtttccgctatcg 51460383  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag-aggtgtgttaagagtcca 232  Q
    ||| || ||| |||| ||||||||||||||   |||| |||||  ||||||| | ||||||||||||||||    
T  51460382 ggcgacccaccatttgtgtccacgaaccaaactcaattgtgctagtcgtgagtatgtgtgttaagagtcca 51460312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 4113044 - 4112877
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||| ||| || |    ||||||||||    ||||  ||| |||||||| | |||      
T  4113044 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcggagcctct--ccaagatccattgagccaccatctatcaggtttccgctattg 4112947  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    | |||| ||| |||||||||||||||||||   ||||||||||| |||||| | ||||||||||||||||    
T  4112946 gaccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaagagtcc 4112877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 230
Target Start/End: Complemental strand, 25145753 - 25145592
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggcca 167  Q
    ||||||||||||| ||||||||| ||||||||| ||| |||||||| || |    |||||| |||    ||||||||| |||||||| |||||| | |||    
T  25145753 tggggttgtgttaggcccaaccatgatttctaagatgatatcagagcctctcc--aagatctattgacccacctgctatcaggtttccgttatcggacca 25145656  T
Q  168 cacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtc 230  Q
    | ||| ||| ||||||||||| |||   ||||||||||| |||||| | |||||||||||||||    
T  25145655 cccaccattaatgtccacgaatcaagctcaatagtgctggtcgtgagggggtgtgttaagagtc 25145592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 229
Target Start/End: Complemental strand, 31496409 - 31496244
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    ||||||||||||||||||  | ||| |||||||||||| || |||| ||||||| |  |||||||||||| || ||||||||| |||||| | | ||||     
T  31496409 ttttatggggttgtgttagactcaatcacgatttctaagatagtattagagtctct--ttaagatccattggaccacctgctatcaggttcccgctatcg 31496312  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtg-agaggtgtgttaagagt 229  Q
    | |||| ||| |||||||| ||| || |||   || |||||||| ||||| || ||||||||||||||    
T  31496311 gaccacccaccatttatgtgcactaatcaagctcagtagtgctggtcgtgaaggggtgtgttaagagt 31496244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 51589850 - 51589902
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  51589850 gattttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 51589902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 369734 - 369841
Alignment:
Q  122 taagatccattagatcacctgctaccaggtttctgttatcaggc-cacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagagg-tg 219  Q
    ||||||||||| ||||| |||||| |||||||| | |||| ||  ||| ||| |||||||||||||||||||  |||||||||||| ||||||| || ||    
T  369734 taagatccattggatcagctgctatcaggtttccgctatcggggtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggatg 369833  T
Q  220 tgttaaga 227  Q
    ||||||||    
T  369834 tgttaaga 369841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 3169812 - 3169863
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagt 114  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  3169812 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagt 3169863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 214
Target Start/End: Complemental strand, 12376711 - 12376562
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    ||||||||||||| |||| | ||||| |||||||||||  |||||| ||||  |    |||||||||||| |  ||||||||| |||||| ||| |||||    
T  12376711 ttttatggggttgagttaggtccaacgacgatttctaagttggtattagagcatccg-ttaagatccattgggccacctgctatcaggtt-ctgctatca 12376614  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
    ||||||  || |||||||||||||||||||  ||||||||| || |||||||    
T  12376613 ggccacctaccatttatgtccacgaaccaagcccaatagtgttggtcgtgag 12376562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 29265999 - 29266049
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  29265999 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 29266049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 39348390 - 39348242
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||| ||||||||||| |||||||||||| ||      ||| |||||| |  ||||||||| ||||||||   ||||     
T  39348390 ttttgtggggttgtgttaggcccaac-acgatttctaagatggtatcagagcctcctcc-aaggtccattgggccacctgctatcaggtttccactatcg 39348293  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga 213  Q
    | |||| ||| |||||||||||||||||||  |||||||||||| ||||||    
T  39348292 gaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtga 39348242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 25713262 - 25713371
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtg 221  Q
    |||||||||| |  ||||||||| || ||||| | |||| |||||| ||| |||||||||||||||||||  ||||||||| || |||||| | || |||    
T  25713262 aagatccattgggccacctgctatcaagtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggggtg 25713361  T
Q  222 ttaagagtcc 231  Q
    ||||||||||    
T  25713362 ttaagagtcc 25713371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 32783298 - 32783220
Alignment:
Q  84 ccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcagg 164  Q
    ||||||||||||||||| ||||||||||||||| |  | ||||||||||  | ||||||||| |||||||||| |||||||    
T  32783298 ccaaccacgatttctaagatggtatcagagtctct--tcaagatccattgtaccacctgctatcaggtttctgctatcagg 32783220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 39100453 - 39100560
Alignment:
Q  126 atccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgaga-ggtgtgtta 224  Q
    ||||||| | ||| |||||| ||||||| | ||||| || ||| ||||||||||||||||||| |||  |||||||  ||| |||||||| || ||||||    
T  39100453 atccattgggtcatctgctatcaggtttttattatcgggtcacccactatttatgtccacgaatcaaacccaatagaactggtcgtgagagggggtgtta 39100552  T
Q  225 agagtcca 232  Q
    ||||||||    
T  39100553 agagtcca 39100560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 8870869 - 8870795
Alignment:
Q  158 tatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    ||||| ||||| ||| |||||||||||||||||||  ||||| |||||| |||||| | ||||||||||||||||    
T  8870869 tatcaagccacccaccatttatgtccacgaaccaaacccaattgtgctggtcgtgagggggtgtgttaagagtcc 8870795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 51589272 - 51589322
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  51589272 ttttgtggggttgtgttaggcctaaccacgatttctaatatggtatcagag 51589322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 8870948 - 8870895
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||| ||||||||||||| | |||||||| |||||||| |||||||||||||||    
T  8870948 ttttgtggggttgtgttaggtccaaccaccatttctaagatggtatcagagtct 8870895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 12325497 - 12325421
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
    ||||||||| |||||| |||||||| ||||||  || |||||||||||||||||||  ||||||||| || |||||||    
T  12325497 cacctgctatcaggtt-ctgttatcgggccacctaccatttatgtccacgaaccaagcccaatagtgttggtcgtgag 12325421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 17412436 - 17412545
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtg 221  Q
    ||||||||||||||||| ||||| ||| |||  ||||||  ||||| ||  ||||||||||||||| |||  ||||||||| || |||||| | ||||||    
T  17412436 aagatccattagatcacttgctatcagattttcgttatcgagccacccatcatttatgtccacgaatcaagcccaatagtgttggtcgtgatggggtgtg 17412535  T
Q  222 ttaagagtcc 231  Q
    |||| |||||    
T  17412536 ttaaaagtcc 17412545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 7307825 - 7307933
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtg 221  Q
    |||||||||| | ||  |||||| |||||||| | |||  | |||| ||| ||||||||||||||||||| |||||||||| || |||||| | |||||     
T  7307825 aagatccattgggtcgtctgctatcaggtttccgctattggaccacccaccatttatgtccacgaaccaaatccaatagtgttggtcgtgagggggtgta 7307924  T
Q  222 ttaagagtc 230  Q
    |||||||||    
T  7307925 ttaagagtc 7307933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 16163051 - 16163145
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagag-gtgtgttaagagtcc 231  Q
    ||||||||| |||||||| | |||| ||||||  || |||||||||||||| ||||  || ||||||||| ||||||| | |||||||||||||||    
T  16163051 cacctgctatcaggtttccgctatcgggccacctaccatttatgtccacgagccaa-gcccatagtgctggtcgtgagggtgtgtgttaagagtcc 16163145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 17452717 - 17452678
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaa 102  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  17452717 ttttgtggggttgtgttaggcccaaccacgatttctaaaa 17452678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 51460086 - 51460043
Alignment:
Q  65 ttatggggttgtgttaagcccaaccacgatttctaaaatggtat 108  Q
    |||||||||||||||| |||||||||| |||||||| |||||||    
T  51460086 ttatggggttgtgttaggcccaaccacaatttctaagatggtat 51460043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 51589038 - 51589085
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatca 110  Q
    |||| ||||||||||||| |||||||||| |||||||| |||||||||    
T  51589038 ttttgtggggttgtgttaggcccaaccaccatttctaatatggtatca 51589085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 17452866 - 17452816
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||| ||||    
T  17452866 ttttgtggggttgtgttaggcctaaccacgatttctaagatggtattagag 17452816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 42586478 - 42586440
Alignment:
Q  62 attttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  42586478 attttgtggggttgtgttaggcccaaccacgatttctaa 42586440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 9499291 - 9499344
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||| ||||||||||||   | |||||||||||||||||||| |||||||||||    
T  9499291 ttttgtggggttgtgttcgactcaaccacgatttctaaaatgatatcagagtct 9499344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 25255357 - 25255394
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  25255357 ttttgtggggttgtgttaggcccaaccacgatttctaa 25255394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 26177189 - 26177226
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  26177189 ttttgtggggttgtgttaggcccaaccacgatttctaa 26177226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 35772310 - 35772347
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  35772310 ttttgtggggttgtgttaggcccaaccacgatttctaa 35772347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 40079198 - 40079235
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  40079198 ttttgtggggttgtgttaggcccaaccacgatttctaa 40079235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 20208262 - 20208230
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaa 100  Q
    ||||||||||||| |||||||||||||||||||    
T  20208262 tggggttgtgttaggcccaaccacgatttctaa 20208230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 20208561 - 20208529
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaa 100  Q
    ||||||||||||| |||||||||||||||||||    
T  20208561 tggggttgtgttaggcccaaccacgatttctaa 20208529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 35788705 - 35788872
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||      ||||||| || |  ||||||||| |||||||| |||||||    
T  35788705 ttttatggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcc-aagatccgttgggccacctgctatcaggtttccgttatca 35788803  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  |||||||||||| ||||||| || |||||||||||||    
T  35788804 ggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggggtgttaagagtcc 35788872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 229
Target Start/End: Complemental strand, 35797015 - 35796850
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||||||||||| || |||||||| |||||||||||| || |  |  ||||||||| ||  |||||||| |||||||| | ||||     
T  35797015 ttttgtggggttgtgttaagcccaactaccatttctaagatggtatcagagcctct--tcgagatccattggactacctgctatcaggtttccgctatcg 35796918  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagt 229  Q
    |||||| ||| |||||| ||||||||||||  |||||||||||| |||||| | ||||||||||||||    
T  35796917 ggccacccaccatttatctccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagt 35796850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 22231346 - 22231179
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| || |    || ||||||| |  ||||||||| |||||||| | ||||     
T  22231346 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctcc--aaaatccattgggccacctgctatcaggtttccgctatcg 22231249  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagagg-tgtgttaagagtcc 231  Q
    ||||||  || |||||||||||||||||||  ||||||||||| ||| |||| || ||||||||||||||    
T  22231248 ggccacctaccatttatgtccacgaaccaagcccaatagtgctcatcatgaggggatgtgttaagagtcc 22231179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 82 - 230
Target Start/End: Complemental strand, 28245780 - 28245633
Alignment:
Q  82 gcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgt 181  Q
    ||||||||||||||||||| |||||||||||| || |    |||||||||| |  ||||||||| |||||||| | |||| |||||| ||| ||||||||    
T  28245780 gcccaaccacgatttctaatatggtatcagagcctctcc--aagatccattgggccacctgctatcaggtttccgctatcgggccacccaccatttatgt 28245683  T
Q  182 ccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtc 230  Q
    |||||||||||  |||||||||||| |||||| | |||||||||||||||    
T  28245682 ccacgaaccaagcccaatagtgctggtcgtgatggggtgtgttaagagtc 28245633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 50543605 - 50543439
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccat--tagatcacctgctaccaggtttctgttat 160  Q
    |||| ||| ||||||||| ||||||||||||||||||| ||| |||||||| || |    |||||||||  | || ||||||||| |||||||| |||||    
T  50543605 ttttgtggagttgtgttaggcccaaccacgatttctaagatgatatcagagcctctcc--aagatccatatttgaccacctgctatcaggtttccgttat 50543508  T
Q  161 caggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagag 228  Q
    | |||||| ||| |||||||||||||||||||  ||||||||| || |||||| | |||||||||||||    
T  50543507 cgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgttaagag 50543439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 35819158 - 35819025
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacac 170  Q
    |||||||||| ||||||||||||||| ||| |||| |||||||||| |   ||||||||||| |  ||||||||| |||||||| | |||| || ||| |    
T  35819158 ggttgtgttaggcccaaccacgatttttaagatggcatcagagtctctc--taagatccattgggccacctgctatcaggtttccgctatcgggtcaccc 35819061  T
Q  171 actatttatgtccacgaaccaattccaatagtgctg 206  Q
    || |||||||||||||||||||  ||||||||||||    
T  35819060 accatttatgtccacgaaccaagcccaatagtgctg 35819025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 40717479 - 40717312
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| || |    || ||||||| |  ||||||| | |||||||| | ||||     
T  40717479 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct--ccaatatccattgggccacctgccatcaggtttccgctatcg 40717382  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    | |||| ||| |||||||||||| ||||||  | |||||||||| |||||| | ||||||||||||||||    
T  40717381 gaccacccaccatttatgtccacaaaccaagcctaatagtgctggtcgtgagggggtgtgttaagagtcc 40717312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 6218250 - 6218416
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||| |||||||||  | |||||||||||||||| |||||||||||| || |    |||||||||| |||||||| ||| |||||||| | |||||    
T  6218250 ttttgtggagttgtgttagacacaaccacgatttctaagatggtatcagagcctctcc--aagatccattggatcacctactatcaggtttccgctatca 6218347  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtc 230  Q
    || ||| ||  |||||||| || |||||||  |||||||||||| |||||| | |||||||||||||||    
T  6218348 ggtcacccatcatttatgtacaagaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtc 6218416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 27634296 - 27634187
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtg 221  Q
    |||||||||| || ||| ||||| |||||||||| |||| | |||| |||| ||||||||||||||||||  |||||||||||| |||||| | || |||    
T  27634296 aagatccattggaccacttgctatcaggtttctgctatcggaccacccactgtttatgtccacgaaccaagcccaatagtgctggtcgtgagggggggtg 27634197  T
Q  222 ttaagagtcc 231  Q
    ||||||||||    
T  27634196 ttaagagtcc 27634187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 53814967 - 53814917
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  53814967 ttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagag 53814917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 12869301 - 12869248
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  12869301 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtct 12869248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 17111609 - 17111662
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  17111609 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtct 17111662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 5398676 - 5398581
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    ||||||||| |||||||| | |||| | |||| ||| |||||||||||||||||||  | |||||||||| |||||| | ||||||||||||||||    
T  5398676 cacctgctatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagccaaatagtgctggtcgtgagggggtgtgttaagagtcc 5398581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 14783225 - 14783175
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  14783225 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 14783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 25052898 - 25052948
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  25052898 ttttgtggggttgtgttaggcccaaccacgatttctaacatggtatcagag 25052948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 52559613 - 52559756
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtcta-taattaagatccattagatc-acctgctaccaggtttctgttat 160  Q
    |||| ||||||||||||| ||||||||| ||||||||| || ||||||||| ||  | |  ||||||| || |  | |||||||| || |||| ||||||    
T  52559613 ttttgtggggttgtgttaggcccaaccatgatttctaagatagtatcagagcctcctca--aagatccgtttgggccacctgctatcaagtttatgttat 52559710  T
Q  161 caggccacacactatttatgtccacgaaccaattccaatagtgctg 206  Q
    | |||||| ||| |||||||||||||||||||  ||||||||||||    
T  52559711 cgggccacccaccatttatgtccacgaaccaagcccaatagtgctg 52559756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 5398425 - 5398317
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgt 222  Q
    |||||||| | | ||| |||||| ||||||||   |||| | |||| ||| |||||||||||||||||||  |||||| || || ||||||| |||||||    
T  5398425 aagatccaatgggtcatctgctatcaggtttcccctatcggaccacccaccatttatgtccacgaaccaagcccaataatgttggtcgtgaggggtgtgt 5398326  T
Q  223 taagagtcc 231  Q
    |||||||||    
T  5398325 taagagtcc 5398317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 12005689 - 12005587
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaatt---ccaatagtgctgatcgtgagaggtg 219  Q
    |||||||| | | |||||| ||| |||||||| | ||||||||||||||| ||||||||| |||||||||     |||||||||||| ||||||| ||||    
T  12005689 aagatccactgggtcacctactatcaggtttccgctatcaggccacacaccatttatgtcaacgaaccaacaagcccaatagtgctggtcgtgaggggtg 12005590  T
Q  220 tgt 222  Q
    |||    
T  12005589 tgt 12005587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 53828563 - 53828511
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||||||||||    
T  53828563 gattttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagag 53828511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 6778640 - 6778549
Alignment:
Q  141 tgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    ||||| |||||||| | |||| |||||| | | ||||||||| |||||||||  | ||||||||||||||||| | ||||||||||||||||    
T  6778640 tgctatcaggtttccgctatcgggccaccccccatttatgtctacgaaccaaacctaatagtgctgatcgtgagggggtgtgttaagagtcc 6778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 1518210 - 1518260
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  1518210 ttttgtggggttgtgttaggcctaaccacgatttctaagatggtatcagag 1518260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 9685452 - 9685494
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  9685452 ggttgtgttaggcccaaccacgatttctaatatggtatcagag 9685494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 21498400 - 21498450
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  21498400 ttttgtggggttatgttaggcccaaccacgatttctaatatggtatcagag 21498450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 26030351 - 26030448
Alignment:
Q  56 aagttgattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttc 154  Q
    ||||||||||| | |||||| ||||||  ||||||| |||||||| ||||||||||| ||  || ||||||||||||  | |||||||||| |||||||    
T  26030351 aagttgattttgtagggttgagttaagttcaaccacaatttctaagatggtatcaga-tccttagttaagatccattgaaccacctgctacgaggtttc 26030448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 26549541 - 26549591
Alignment:
Q  136 tcacctgctaccaggtttctgttatcaggccacacactatttatgtccacg 186  Q
    |||||||||| |||||||||||||||||||||| ||  |||||||||||||    
T  26549541 tcacctgctatcaggtttctgttatcaggccacccatcatttatgtccacg 26549591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 50543368 - 50543318
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  50543368 ttttgtggggttgtgttaggcccaaccacgatttctaagatgttatcagag 50543318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 9685678 - 9685715
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||||||||||||||||| |||||||||||||||||||    
T  9685678 ttttatggggttgtgttaggcccaaccacgatttctaa 9685715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 1215883 - 1215939
Alignment:
Q  147 caggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtg 203  Q
    |||||||||| |||||||  || ||| ||||||||||||||||||| ||||||||||    
T  1215883 caggtttctgatatcaggttacccaccatttatgtccacgaaccaagtccaatagtg 1215939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 214
Target Start/End: Original strand, 4645688 - 4645837
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||| ||||||||  | |||||| ||||| ||| || ||||||||| || | |  |||||||||| | |||||||||| |||||||| | ||||     
T  4645688 ttttgtgggattgtgttagactcaaccatgatttataagatagtatcagagcctctca--aagatccattgggtcacctgctatcaggtttccgctatcg 4645785  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
    |||||| ||| | ||||||||||||| |||  |||| |||| || |||||||    
T  4645786 ggccacccaccaattatgtccacgaatcaagcccaaaagtgttggtcgtgag 4645837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 52827466 - 52827518
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||| || |||||||| ||||||||||||||||| ||| ||||||||||||    
T  52827466 gattttgtgaggttgtgtcaagcccaaccacgatttttaagatggtatcagag 52827518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 21685042 - 21685081
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  21685042 gattttgtggggttgtgttaagcccaaccacaatttctaa 21685081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 52827455 - 52827408
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctat 118  Q
    |||||||||| ||||||||| ||||||||| |||||||||||| ||||    
T  52827455 ggttgtgttaggcccaaccatgatttctaagatggtatcagagcctat 52827408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 100
Target Start/End: Complemental strand, 53559330 - 53559291
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  53559330 gattttgtggggttgtgttaggcccaaccacgatttctaa 53559291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 21498841 - 21498878
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  21498841 ttttgtggggttgtgttaggcccaaccacgatttctaa 21498878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 22845485 - 22845448
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  22845485 ttttgtggggttgtgttaggcccaaccacgatttctaa 22845448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 22863520 - 22863557
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  22863520 ttttgtggggttgtgttaggcccaaccacgatttctaa 22863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 35788940 - 35788977
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  35788940 ttttgtggggttgtgttaggcccaaccacgatttctaa 35788977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 40716654 - 40716609
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    ||||||||||||| ||||||||| | ||||||| ||||||||||||    
T  40716654 tggggttgtgttaggcccaaccatggtttctaagatggtatcagag 40716609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 41187978 - 41187933
Alignment:
Q  55 caagttgattttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    ||||||| |||| |||||||| |||| |||||||||||||||||||    
T  41187978 caagttggttttgtggggttgagttatgcccaaccacgatttctaa 41187933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 54054843 - 54054806
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  54054843 ttttgtggggttgtgttaggcccaaccacgatttctaa 54054806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 4464339 - 4464391
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||| ||||||| |||||  ||||||||||| |||||| ||||||||||||    
T  4464339 gattttgtggggttttgttagacccaaccacgaattctaagatggtatcagag 4464391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 13495657 - 13495581
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga 213  Q
    |||||| || |||||||| | ||||||| ||  ||| ||||||||||||||| |||  |||||| ||||||||||||    
T  13495657 cacctgttatcaggtttcggctatcaggtcagccaccatttatgtccacgaatcaagcccaataatgctgatcgtga 13495581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 43743035 - 43743171
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||| |||||  || ||||||||||| ||| || ||||||||| || | |  |||||||||| || ||||||||| |||||||     ||||    
T  43743035 ttttttggggttatgttagacctaaccacgatttataagatagtatcagagcctctca--aagatccatttgaccacctgctatcaggttt-----atca 43743127  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctg 206  Q
    || ||| ||  |||||||||||||||||||  |||||| |||||    
T  43743128 ggtcactcatcatttatgtccacgaaccaaacccaataatgctg 43743171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 9e-30; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 4155370 - 4155537
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| |    ||||| |||| |  ||||||||| |||||||| | ||||     
T  4155370 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtctctcc--aagattcattgggccacctgctatcaggtttccgctatcg 4155467  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgaga-ggtgtgttaagagtcc 231  Q
    |||||| |||  |||||||| |||||||||  |||||||||||| |||||||| ||||||||||||||||    
T  4155468 ggccacccaccgtttatgtcgacgaaccaagcccaatagtgctggtcgtgagagggtgtgttaagagtcc 4155537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 63 - 214
Target Start/End: Complemental strand, 13574959 - 13574809
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||| |||||||| ||||||||| || ||  | |||||||||||| |  ||||||||| |||||||| | ||||     
T  13574959 ttttgtggggttgtgttaggcccaaccacaatttctaatatggtatcaaagcctc-agttaagatccattgggccacctgctatcaggtttccgctatcg 13574861  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
     | ||| ||| |||||||||||||||||||  |||||||||||  |||||||    
T  13574860 tgtcacccaccatttatgtccacgaaccaagcccaatagtgctagtcgtgag 13574809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 20327887 - 20327724
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||| ||||||||| |||||||||| | || |   ||| ||||||| |  ||||||||| |||||||| | ||||     
T  20327887 ttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagtgcctctc--taaaatccattgggccacctgctatcaggtttccgctatcg 20327790  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag-aggtgtgttaaga 227  Q
    |||||| ||| ||||||||||| |||||||  ||||||||| || |||||||  ||||||||||||    
T  20327789 ggccacccaccatttatgtccaggaaccaagcccaatagtgttggtcgtgagcgggtgtgttaaga 20327724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 35038466 - 35038300
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||||| |||||| |||||||||| | || |    |||||||||| |  ||||||| | |||||||| | ||||     
T  35038466 ttttgtggggttgtgttaggcccaaccacgacttctaagatggtatcagtgcctctcc--aagatccattgggccacctgcaatcaggtttccgctatc- 35038370  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  |||||||| ||| |||||| | ||||||||||||||||    
T  35038369 ggccacccaccatttatgtccacgaaccaagcccaatagtactggtcgtgagggggtgtgttaagagtcc 35038300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 16239637 - 16239804
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||| |||||||| ||||||||||||||||||| |||||||||||| ||      ||||||| || |  ||||||||| |||||||| ||||||     
T  16239637 ttttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcc-aagatccgtttggccacctgctatcaggtttccgttatcg 16239735  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtc 230  Q
     ||||| ||| |||||||||||||||||||   |||||||| || |||||| | |||||||||||||||    
T  16239736 agccacccaccatttatgtccacgaaccaagctcaatagtgatggtcgtgagggggtgtgttaagagtc 16239804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 31317274 - 31317444
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggt---atcagagtctataattaagatccattagatcacctgctaccaggtttctgtta 159  Q
    |||| |||| |||||||| || |||||||||||||||| |||||   |||||||||| |    ||||||| || || ||||| ||| ||||||| |||||    
T  31317274 ttttgtgggattgtgttaggctcaaccacgatttctaagatggtggtatcagagtctcttcc-aagatccgttggaccacctactatcaggttt-tgtta 31317371  T
Q  160 tcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    || |||||| ||| |||||||||||||||||||   ||||||||||| |||||| | ||||||||||||||||    
T  31317372 tcgggccacccaccatttatgtccacgaaccaaactcaatagtgctggtcgtgagggggtgtgttaagagtcc 31317444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 20303423 - 20303285
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| | |||||||| |||||||| |||||||||||| || |   ||| ||||||| |  ||||||||| ||||||||   ||||     
T  20303423 ttttgtggggttgtgttaggtccaaccacaatttctaatatggtatcagagcctctc--taaaatccattgggccacctgctatcaggtttccactatcg 20303326  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtg 203  Q
    | |||| ||| ||||||||||||||||||| ||||||||||    
T  20303325 gtccacccaccatttatgtccacgaaccaagtccaatagtg 20303285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 8142685 - 8142558
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| | | ||||||||||||||| |||||||||||| || |  |||| ||||||||| ||| |||||| ||| ||||    ||||    
T  8142685 ttttgtggggttgtgttaggtctaaccacgatttctaagatggtatcagagcctct--ttaaaatccattaggtcatctgctatcagatttcctcaatca 8142588  T
Q  163 ggccacacactatttatgtccacgaaccaa 192  Q
    | |||| ||| |||||||||||||||||||    
T  8142587 gaccacccaccatttatgtccacgaaccaa 8142558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 20303276 - 20303174
Alignment:
Q  126 atccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag-aggtgtgtta 224  Q
    ||||||| | |||||||||| |||||||| | |||| | |||| ||| ||||||||||||||||||| ||||| ||||||| |||||||  |||||||||    
T  20303276 atccattgggtcacctgctatcaggtttccgctatcggtccacccaccatttatgtccacgaaccaagtccaacagtgctggtcgtgagcgggtgtgtta 20303177  T
Q  225 aga 227  Q
    |||    
T  20303176 aga 20303174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 16926987 - 16926934
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||||||||||    
T  16926987 ttttgtggggttgtgttaagctcaaccacgatttctaagatggtatcagagtct 16926934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 34992724 - 34992819
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    ||||||||| |||||||| | | || || ||| ||| |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||||    
T  34992724 cacctgctatcaggtttccgctgtcgggtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 34992819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 1723114 - 1723064
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  1723114 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 1723064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 11589831 - 11589881
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  11589831 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 11589881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 21833398 - 21833444
Alignment:
Q  67 atggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  21833398 atggggttgtgttaggcccaaccacgatttctaacatggtatcagag 21833444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 29215752 - 29215694
Alignment:
Q  174 atttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtcca 232  Q
    |||||||||||||||||||  ||||||||| || ||||||| |||||||||||||||||    
T  29215752 atttatgtccacgaaccaaacccaatagtgttggtcgtgaggggtgtgttaagagtcca 29215694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 54368562 - 54368612
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  54368562 ttttatggggttgtgttagacccaaccacgatttctaagatggtatcagag 54368612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 54567938 - 54567988
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  54567938 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 54567988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 9273007 - 9273056
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcaga 112  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||||||    
T  9273007 ttttgtggggttgtgttaagcccaaccaccatttctaatatggtatcaga 9273056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 39683459 - 39683374
Alignment:
Q  147 caggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagag-gtgtgttaagagtcc 231  Q
    |||||||||| |||| |||||| ||| |||||||||||||||||||  |||||| ||||| ||||||| |  ||||||||||||||    
T  39683459 caggtttctgctatcgggccacccaccatttatgtccacgaaccaagcccaataatgctggtcgtgagggactgtgttaagagtcc 39683374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 19954432 - 19954324
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgt 222  Q
    |||||||||| |  || |||||| |||||||  | |||| | |||| ||| |||||||||||||||||||  |||||||| ||| ||||||| || ||||    
T  19954432 aagatccattgggccatctgctatcaggttttcgctatctgaccacccaccatttatgtccacgaaccaagcccaatagtactggtcgtgaggggggtgt 19954333  T
Q  223 taagagtcc 231  Q
    |||||||||    
T  19954332 taagagtcc 19954324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 17001461 - 17001406
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||||| |||||| |||||| | ||||||| |||||||||||||||||||||||||    
T  17001461 gattttgtggggtagtgttaggtccaaccatgatttctaaaatggtatcagagtct 17001406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 39620372 - 39620409
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| |||||||||||||||||||||||||||||||||    
T  39620372 ttttgtggggttgtgttaagcccaaccacgatttctaa 39620409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 17638286 - 17638330
Alignment:
Q  69 ggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||    
T  17638286 ggggttgtgttaggcccaaccacgatttctaagatggtataagag 17638330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 52724188 - 52724092
Alignment:
Q  136 tcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtg-agaggtgtgttaagagtcc 231  Q
    |||| ||||| |||||||  | |||| |||||| ||| ||||||||||| |||||||   | |||||| |||||||| |||||||||||||||||||    
T  52724188 tcacatgctatcaggttttcgctatcgggccacccaccatttatgtccatgaaccaaactcgatagtgttgatcgtgaagaggtgtgttaagagtcc 52724092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 12930166 - 12930119
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatca 110  Q
    |||| ||||||||||||| |||||||||| |||||||| |||||||||    
T  12930166 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 12930119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 27783111 - 27783157
Alignment:
Q  70 gggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    ||||||||||| |||||| || ||||||||| |||||||||||||||    
T  27783111 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtct 27783157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 29575850 - 29575792
Alignment:
Q  158 tatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagag 216  Q
    ||||||||||| ||||||||||||| |||||||||  |||||||| ||  |||||||||    
T  29575850 tatcaggccacccactatttatgtctacgaaccaagcccaatagtacttgtcgtgagag 29575792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 45139009 - 45138959
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||| |  |||||||||||||||||| ||||||||||||    
T  45139009 ttttgtggggttgtgtaagacccaaccacgatttctaagatggtatcagag 45138959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 20327652 - 20327611
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatg 104  Q
    |||| ||||||||||||| ||||||||||||||| |||||||    
T  20327652 ttttgtggggttgtgttaggcccaaccacgatttttaaaatg 20327611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 112
Target Start/End: Original strand, 22729154 - 22729195
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcaga 112  Q
    |||||||||| |||||||||| |||||||| |||||||||||    
T  22729154 ggttgtgttaggcccaaccacaatttctaagatggtatcaga 22729195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 24866243 - 24866280
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  24866243 ttttgtggggttgtgttaggcccaaccacgatttctaa 24866280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 35038232 - 35038195
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  35038232 ttttgtggggttgtgttaggcccaaccacgatttctaa 35038195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 39620147 - 39620188
Alignment:
Q  72 gttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||||||||  |||||||||||||||| ||||||||||||    
T  39620147 gttgtgttaagttcaaccacgatttctaagatggtatcagag 39620188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 47702447 - 47702410
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  47702447 ttttgtggggttgtgttaggcccaaccacgatttctaa 47702410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 50052577 - 50052540
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  50052577 ttttgtggggttgtgttaggcccaaccacgatttctaa 50052540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 13574722 - 13574686
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttcta 99  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  13574722 ttttgtggggttgtgttaggcccaaccacgatttcta 13574686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 15019556 - 15019504
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    ||||||||| |||||||||| |  |||||||||||||||| ||||||| ||||    
T  15019556 gattttatgaggttgtgttatgttcaaccacgatttctaagatggtattagag 15019504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 213
Target Start/End: Original strand, 49629651 - 49629800
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||||||||||||  |||||  || |||| ||||||||||| |||| || |  | |||||||||| || ||||||||| |||||||||| ||||     
T  49629651 ttttgtggggttgtgttagacccaattaccatttttaaaatggtattagagcctct--tcaagatccattggaccacctgctatcaggtttctgctatcg 49629748  T
Q  163 g-gccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga 213  Q
    | ||  | ||| |||||||||||  ||||||  ||||||||| || ||||||    
T  49629749 gagcatcccaccatttatgtccataaaccaagcccaatagtgttggtcgtga 49629800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 9e-30; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 15124821 - 15124654
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||||||||||||  |||||||||||||||||| ||||||||||||||| |    |||||||||| || ||||||||| |||||||  ||||||     
T  15124821 ttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagtctctcc--aagatccattggaccacctgctatcaggttttcgttatcg 15124724  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagagg-tgtgttaagagtcc 231  Q
    || ||  ||| ||||||||||||||||||| ||||||||||||| | ||||| || ||||||||||||||    
T  15124723 ggtcatccaccatttatgtccacgaaccaagtccaatagtgctggttgtgaggggatgtgttaagagtcc 15124654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 40149264 - 40149110
Alignment:
Q  73 ttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacacac 172  Q
    |||||||| |||||||||| |||||||| |||||||||||| || |  | |||||||||| | |||||||||| ||| |||| | |||| | |||| |||    
T  40149264 ttgtgttaggcccaaccacaatttctaagatggtatcagagcctct--tcaagatccattgggtcacctgctatcagatttcagctatcggaccacccac 40149167  T
Q  173 tatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtc 230  Q
    ||||||||||||||||||||  |||||||||||| ||||||| |||||||||||||||    
T  40149166 tatttatgtccacgaaccaagcccaatagtgctggtcgtgag-ggtgtgttaagagtc 40149110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 40379482 - 40379315
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| || |    ||||||||||||  ||||||||| ||||||||   ||||     
T  40379482 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctttcc--aagatccattaggccacctgctatcaggtttcctctatcg 40379385  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||| ||||||||||||  |||| ||||||| |||||| ||||||||||||||||||    
T  40379384 ggccacccaccatttatatccacgaaccaagcccaaaagtgctggtcgtgaggaggtgtgttaagagtcc 40379315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 16533358 - 16533525
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    ||||||| ||||||||||  |||||| |||| ||||||||||||||||||| || |  | |||||||||| |   |||||||| |||||||  | ||||     
T  16533358 ttttatgaggttgtgttacacccaactacgacttctaaaatggtatcagagcctct--tcaagatccattgggctacctgctatcaggttttcgctatcg 16533455  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgaga-ggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  |||||||||||| |||||||| ||||||||||||||||    
T  16533456 ggccacccaccatttatgtccacgaaccaaggccaatagtgctggtcgtgagagggtgtgttaagagtcc 16533525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 5711713 - 5711545
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||| |||||||| || ||||||||| ||      ||||||| || || ||||||||| |||||||| ||||||     
T  5711713 ttttgtggggttgtgttaggcccaaccaccatttctaagatagtatcagagcctcctcc-aagatccgttggaccacctgctatcaggtttccgttatcg 5711615  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||||    
T  5711614 ggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 5711545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 2029815 - 2029982
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||| ||| ||||||||||||||||||| |||||||||||| || |    |||||||||| |  |||||||||  ||||||| | ||||     
T  2029815 ttttgtggggttgttttaggcccaaccacgatttctaagatggtatcagagcctctcc--aagatccattgggccacctgctattaggtttccgctatcg 2029912  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    | |||| ||| |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||||    
T  2029913 gaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 2029982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 16419313 - 16419480
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||| ||| ||||||||||||||||||| |||||||||||| || |    |||||||||| |  ||||||||| |||||||| | ||||     
T  16419313 ttttgtggggttgtattaggcccaaccacgatttctaagatggtatcagagcctctcc--aagatccattgggccacctgctatcaggtttccgctatcg 16419410  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
     ||||| ||| |||||||||||||||||||   ||||||||||| |||||| | ||||||||||||||||    
T  16419411 agccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaagagtcc 16419480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 63 - 229
Target Start/End: Complemental strand, 14466448 - 14466283
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||| |||||||| |||||||||||| || |    |||||||||| |  ||| || || |||||||| | ||||     
T  14466448 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctcc--aagatccattgggccacttgttatcaggtttccgctatcg 14466351  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagt 229  Q
    |||||| ||| |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||    
T  14466350 ggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagt 14466283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 93392 - 93228
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||| ||| |||||||||||| || |    |||||||||| |  ||||||||| ||| |||| ||||||     
T  93392 ttttgtggggttgtgttaggcccaaccacgatttttaagatggtatcagagcctctcc--aagatccattgggccacctgctatcagctttccgttatcg 93295  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtcc 231  Q
    |||||| ||| | ||||||||||||| |||  |||||||||||| ||||  | ||||||||||||||||    
T  93294 ggccacccaccaattatgtccacgaatcaagcccaatagtgctggtcgt--ggggtgtgttaagagtcc 93228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 33606327 - 33606160
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||| ||| ||||| || |||||||||||||||| ||| ||||| ||||| |  | |||||| ||| | |||| ||||| |||||||| | |||||    
T  33606327 ttttgtggcgttatgttaggcacaaccacgatttctaagatgatatcaaagtctct--tcaagatctattgggtcacttgctatcaggtttccgctatca 33606230  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  | ||||||| || |||||| | ||||||||||||||||    
T  33606229 ggccacccaccatttatgtccacgaaccaagcctaatagtgatggtcgtgaggtggtgtgttaagagtcc 33606160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 37812483 - 37812374
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtg 221  Q
    |||||||||| |  ||||||||| |||||||||| |||| |||||| |||| ||||||||||||||||||  |||||| ||||| |||||| | ||||||    
T  37812483 aagatccattgggccacctgctatcaggtttctgctatcgggccacccactgtttatgtccacgaaccaagcccaataatgctggtcgtgagggggtgtg 37812384  T
Q  222 ttaagagtcc 231  Q
    ||||||||||    
T  37812383 ttaagagtcc 37812374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 93665 - 93562
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||  || |    |||||||||| | |||||| ||| |||||||| ||||||     
T  93665 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagaaccttt--ccaagatccattgggtcacctactatcaggtttccgttatcg 93568  T
Q  163 ggccac 168  Q
    ||||||    
T  93567 ggccac 93562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 21591828 - 21591881
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| ||||||||    
T  21591828 ttttatggggttgtgttaggcccaaccacgatttctaagttggtagcagagtct 21591881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 44404142 - 44404033
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgt-tatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgt 220  Q
    |||||||||| || ||||||||| |||||||| |  |||| || ||| ||||||||||||||| |||||||  ||||||||| || |||||| | |||||    
T  44404142 aagatccattggaccacctgctatcaggtttccgcctatcgggtcacccactatttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgt 44404043  T
Q  221 gttaagagtc 230  Q
    ||||||||||    
T  44404042 gttaagagtc 44404033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 19110347 - 19110455
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagag-gtgtg 221  Q
    ||||||| || | ||||||||||  |||||| || |||| |||||  ||  ||||||| |||||||||||   ||||||||||||||||||||| |||||    
T  19110347 aagatccgttgggtcacctgctattaggtttttgctatcgggccattcatcatttatgcccacgaaccaagctcaatagtgctgatcgtgagagtgtgtg 19110446  T
Q  222 ttaagagtc 230  Q
    |||||||||    
T  19110447 ttaagagtc 19110455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 10571016 - 10571067
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagt 114  Q
    |||| ||||||||||||| || |||||||||||||||| |||||||||||||    
T  10571016 ttttgtggggttgtgttaggctcaaccacgatttctaagatggtatcagagt 10571067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 2324286 - 2324336
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  2324286 ttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagag 2324336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 5509125 - 5509175
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  5509125 ttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagag 5509175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 17525300 - 17525206
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag-aggtgtgttaagagtc 230  Q
    ||||||||| ||||| || | |||| |||||| ||| |||||||||||||||||||  ||||||||| || |||||||  |||||||||| ||||    
T  17525300 cacctgctatcaggtatccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgatggtcgtgagtgggtgtgttaaaagtc 17525206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 28407831 - 28407781
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  28407831 ttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagag 28407781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 36352197 - 36352033
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |  ||||||| |||| ||| ||||||| ||||||| |  | |||||||||  |  |||||| || |||||||| ||||||     
T  36352197 ttttgtggggttgtgttaggttcaaccacaatttttaagatggtattagagtctct--tcaagatccatcgggccacctgttatcaggtttccgttatcg 36352100  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtc 230  Q
    |||||| ||| |||||  ||||||||| ||  ||||||||| || |||||| | |||||||||||||||    
T  36352099 ggccacccaccattta--tccacgaacgaagcccaatagtgttggtcgtgatggggtgtgttaagagtc 36352033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 10523065 - 10523110
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtat 108  Q
    |||| |||| |||||||| |||||||||||||||||||||||||||    
T  10523065 ttttgtgggattgtgttaggcccaaccacgatttctaaaatggtat 10523110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 27897644 - 27897591
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||| ||||||||||||| |||||||||| |||||||| ||||||||| |||||    
T  27897644 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcaaagtct 27897591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 24395907 - 24395959
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||| ||||||||||||| ||| ||||||||||||||| | ||||||||||    
T  24395907 gattttgtggggttgtgttaggccaaaccacgatttctaagagggtatcagag 24395959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 5594286 - 5594325
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaa 102  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  5594286 ttttatggagttgtgttaagctcaaccacgatttctaaaa 5594325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 27036446 - 27036403
Alignment:
Q  70 gggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||    
T  27036446 gggttgtgttaggcccaaccatgatttctaatatggtatcagag 27036403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 30701163 - 30701124
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaa 102  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  30701163 ttttgtggggttgtgttaagcccaaccacaatttctaaaa 30701124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 18607224 - 18607142
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgct 205  Q
    |||||||||| |  ||| ||||| |||||||| |||||| ||| || ||| ||||||||| |||||||||  |||||||||||    
T  18607224 aagatccattgggccacatgctatcaggtttccgttatcgggcaacccaccatttatgtctacgaaccaagcccaatagtgct 18607142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 21383708 - 21383658
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| |||| ||| |||| ||||||||||||||||||| ||||||||||||    
T  21383708 ttttgtgggattgagttaggcccaaccacgatttctaagatggtatcagag 21383658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 29718374 - 29718424
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||| |||||||||||||||  |||||||||||    
T  29718374 ttttgtggggttgtgttaggcctaaccacgatttctaagttggtatcagag 29718424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 33381221 - 33381077
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgtta--tcaggccac 168  Q
    ||||||||||  |||||||||||||||||| ||||||| |||||||    | ||||| ||||||  ||| ||||| |||||||||| ||  ||  | |||    
T  33381221 ggttgtgttagtcccaaccacgatttctaagatggtattagagtct-ccttcaagattcattaggccacatgctaacaggtttctgctatctcgagtcac 33381123  T
Q  169 acactatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
     ||  |||||||||||||||||||  ||| |||||||| |||||||    
T  33381122 ccatcatttatgtccacgaaccaaacccagtagtgctggtcgtgag 33381077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 5711477 - 5711440
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  5711477 ttttgtggggttgtgttaggcccaaccacgatttctaa 5711440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 8424934 - 8424971
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  8424934 ttttgtggggttgtgttaagctcaaccacgatttctaa 8424971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 16419548 - 16419585
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  16419548 ttttgtggggttgtgttaggcccaaccacgatttctaa 16419585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 17719612 - 17719649
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  17719612 ttttgtggggttgtgttaggcccaaccacgatttctaa 17719649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 17854967 - 17854914
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||| |||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  17854967 ttttgtggggttgtgctagacccaaccacgatttctaatatgatatcagagtct 17854914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 19191648 - 19191611
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  19191648 ttttgtggggttgtgttaggcccaaccacgatttctaa 19191611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 40379247 - 40379210
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  40379247 ttttgtggggttgtgttaggcccaaccacgatttctaa 40379210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 13486377 - 13486417
Alignment:
Q  60 tgattttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    ||||||| ||||||||||||| ||| |||||||||||||||    
T  13486377 tgattttgtggggttgtgttaggcctaaccacgatttctaa 13486417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 41667031 - 41666863
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||      ||||||| || |  ||||||||| |||||||| ||||||     
T  41667031 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcc-aagatccgttgggccacctgctatcaggtttccgttatcg 41666933  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||||    
T  41666932 ggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 41666863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 18333737 - 18333575
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||||| |||||| |||||||||||| || |  | |||||||||  |  ||||||||| |||||||  | ||||     
T  18333737 ttttgtggggttgtgttaggcccaaccacgaattctaagatggtatcagagcctct--tcaagatccatcgggccacctgctatcaggttttcgctatcg 18333640  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaaga 227  Q
    |||||| ||| |||||||||||||||||||  ||| |||||||| ||||||| ||||||||||||    
T  18333639 ggccacccaccatttatgtccacgaaccaagcccattagtgctggtcgtgaggggtgtgttaaga 18333575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 24531643 - 24531807
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttat 160  Q
    |||||| ||||||||||||| ||||||||||||||||||| |||||||||||| || |   || |||||||| |  ||||||||| ||| ||||||||||    
T  24531643 gattttgtggggttgtgttatgcccaaccacgatttctaagatggtatcagagcctct--ctatgatccattgggccacctgctatcagttttctgttat 24531740  T
Q  161 caggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaag 226  Q
    |   |||| ||  |||||||||||||||||||  |||||||||||| |||||| | |||||||||||    
T  24531741 cgaaccacccaacatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaag 24531807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 15480368 - 15480535
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||| ||||| ||||||||||||||||||| |||||||||||| || |  | |||||||||| |  ||||||||| |||||||| | |||      
T  15480368 ttttgtggggttctgttaggcccaaccacgatttctaagatggtatcagagcctct--tcaagatccattgggccacctgctatcaggtttccgctattg 15480465  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| ||||||||||| |||||||  | ||| |||||| |||||| ||||||||||||||||||    
T  15480466 ggccacccaccatttatgtccatgaaccaagcctaatcgtgctggtcgtgaggaggtgtgttaagagtcc 15480535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 24346775 - 24346607
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||||||||||||  |||||||||||||| ||| |||||||||||| ||      |||||||||| |  ||||||||| |||||||| ||||||     
T  24346775 ttttgtggggttgtgttagacccaaccacgatttttaagatggtatcagagcctcctcc-aagatccattgggccacctgctatcaggtttccgttatcg 24346677  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||   ||||||||||| |||||| | ||||||||||||||||    
T  24346676 ggccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaagagtcc 24346607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 76 - 230
Target Start/End: Complemental strand, 95526 - 95373
Alignment:
Q  76 tgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacacactat 175  Q
    ||||| ||||||||||||||||||| |||||||||||| || |    |||||||||| |  ||||||||| |||||||| |  ||| |||||| ||| ||    
T  95526 tgttaggcccaaccacgatttctaagatggtatcagagcctctcc--aagatccattgggccacctgctatcaggtttccgccatcgggccacccaccat 95429  T
Q  176 ttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtc 230  Q
    |||||||||||||||||  |||||||||||| |||||| | |||||||||||||||    
T  95428 ttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtc 95373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 24270143 - 24269976
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| | ||||||||||||| ||| |||||||||||| ||      |||||||||| |  ||||||||| |||||||| ||||||     
T  24270143 ttttgtggggttgtgtta-gaccaaccacgatttttaagatggtatcagagcctcctcc-aagatccattgggccacctgctatcaggtttccgttatcg 24270046  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||   ||||||||||| |||||| | ||||||||||||||||    
T  24270045 ggccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaagagtcc 24269976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 32908990 - 32908824
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||||||||||||  | ||||||| |||||||| ||| ||| |||| || |  | |||||||||| |  || |||||| |||||||||| ||||     
T  32908990 ttttgtggggttgtgttagactcaaccacaatttctaagatgatattagagcctct--tcaagatccattgggccatctgctatcaggtttctgctatcg 32908893  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtcc 231  Q
    || ||| ||| ||||||||| |||||||||  |||||||||||| ||||||| ||||||||||||||||    
T  32908892 ggtcacccaccatttatgtcaacgaaccaaacccaatagtgctggtcgtgaggggtgtgttaagagtcc 32908824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 9368641 - 9368808
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||  ||||||||  ||||||||||| || |  | |||||||||| |  ||||||||| |||||||| | |||      
T  9368641 ttttgtggggttgtgttaggcccaaccataatttctaaggtggtatcagagcctct--tcaagatccattgggccacctgctatcaggtttccgctattg 9368738  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    | |||| ||| || ||||||||||||||||  |||||||||||| |||||| | ||||| ||||||||||    
T  9368739 gaccacccaccatgtatgtccacgaaccaaacccaatagtgctggtcgtgagggggtgtcttaagagtcc 9368808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 13700805 - 13700696
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag-aggtgtg 221  Q
    |||||||||| | |||||||||| |||||||| | ||||||||||| ||| |||||||  ||||||||||  ||||||||| || |||| || |||||||    
T  13700805 aagatccattgggtcacctgctatcaggtttccgctatcaggccacccaccatttatgatcacgaaccaaacccaatagtgttggtcgtaagaaggtgtg 13700706  T
Q  222 ttaagagtcc 231  Q
    ||||||||||    
T  13700705 ttaagagtcc 13700696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 229
Target Start/End: Complemental strand, 25258339 - 25258174
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||||||||||||| | |||||||||||||||| ||||||||||||  | |    |||||||||| |  ||||||||| |||||||| | ||||     
T  25258339 ttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttct--ccaagatccattgggccacctgctatcaggtttccgctatcg 25258242  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagt 229  Q
    | |||| ||| |||||||||||||||||||  | |||| ||||| || ||| | ||||||||||||||    
T  25258241 gaccacccacaatttatgtccacgaaccaagccaaataatgctggtcatgagggggtgtgttaagagt 25258174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 229
Target Start/End: Complemental strand, 25322129 - 25321964
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||||||||||||| | |||||||||||||||| ||||||||||||  | |    |||||||||| |  ||||||||| |||||||| | ||||     
T  25322129 ttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttct--ccaagatccattgggccacctgctatcaggtttccgctatcg 25322032  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagt 229  Q
    | |||| ||| |||||||||||||||||||  | |||| ||||| || ||| | ||||||||||||||    
T  25322031 gaccacccacaatttatgtccacgaaccaagccaaataatgctggtcatgagggggtgtgttaagagt 25321964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 231
Target Start/End: Original strand, 43117698 - 43117859
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggcca 167  Q
    ||||||||||||| ||||||| ||||||||||| || ||||||||| || |    |||||| ||| |  ||||||||| |||||||| | |||| | |||    
T  43117698 tggggttgtgttaggcccaacaacgatttctaagatagtatcagagcctttcc--aagatctattgggccacctgctatcaggtttccgctatcggacca 43117795  T
Q  168 cacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtcc 231  Q
    | ||  |||||||||||||||||||   |||||||| || ||||||| || |||||||||||||    
T  43117796 cccatcatttatgtccacgaaccaagctcaatagtgttggtcgtgaggggggtgttaagagtcc 43117859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 229
Target Start/End: Complemental strand, 17150501 - 17150341
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggcca 167  Q
    ||||||||||||| || |||| ||||||| ||| |||||||||||| || |  | |||||||||| |  ||||| ||| |||||||| | |||| |||||    
T  17150501 tggggttgtgttaggctcaactacgatttttaagatggtatcagagcctct--tcaagatccattgggccacctactatcaggtttccgctatcgggcca 17150404  T
Q  168 cacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagt 229  Q
    | ||| |||||||||||  ||||||| ||||||||| || | |||| | ||||||||||||||    
T  17150403 cccaccatttatgtccagaaaccaataccaatagtgttgtttgtgagggggtgtgttaagagt 17150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 6919459 - 6919300
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacac 170  Q
    |||||||||| || |||||||||||| ||| ||||||||| || || |  | ||||||||||   ||| |||||| |||||||| | | || | |||| |    
T  6919459 ggttgtgttaggctcaaccacgatttttaagatggtatcaaagcctct--tcaagatccattgagtcatctgctatcaggtttccgctttcggaccactc 6919362  T
Q  171 actatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    || |||||||||||||||||||  |||||||||||| |||||| |  |||||||||||||||    
T  6919361 accatttatgtccacgaaccaagcccaatagtgctggtcgtgatggtgtgtgttaagagtcc 6919300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 8098363 - 8098413
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  8098363 ttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagag 8098413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 2063772 - 2063683
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttc 154  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| || |  | |||||||||| |||||| || || ||||||||    
T  2063772 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct--tcaagatccattggatcacatgttatcaggtttc 2063683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 17016066 - 17015982
Alignment:
Q  147 caggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtcc 231  Q
    |||||||| | |||| | |||| ||| ||||||||||||||||||| |||||||||| || ||||||| | ||||||||||||||    
T  17016066 caggtttccgctatcggaccacccaccatttatgtccacgaaccaagtccaatagtgttggtcgtgagggttgtgttaagagtcc 17015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 6413695 - 6413568
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||||||||||||| |||||| ||||||||||| ||||||||| || || |  | |||||||||| |  ||||||||| ||||| ||   ||||     
T  6413695 ttttttggggttgtgttaaacccaacaacgatttctaatatggtatcaaagcctct--tcaagatccattgggccacctgctatcaggtatccactatcg 6413598  T
Q  163 ggccacacactatttatgtccacgaaccaa 192  Q
     ||||| ||| |||||||||||||||||||    
T  6413597 agccacccaccatttatgtccacgaaccaa 6413568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 15590056 - 15590150
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtc 230  Q
    ||||||||| || ||||| | |||| ||| || ||| |||||||||||||||||||  |||||||||||| |||||| | |||||||||||||||    
T  15590056 cacctgctatcaagtttccgctatcgggctactcaccatttatgtccacgaaccaaacccaatagtgctggtcgtgagggggtgtgttaagagtc 15590150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 21209959 - 21209909
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  21209959 ttttgtggggttgtgttaagcccaaccacgatttctaatatggtattagag 21209909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 24487675 - 24487633
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  24487675 ggttgtgttaagcccaaccacgatttctaatatggtatcagag 24487633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 24528586 - 24528753
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||| ||||||||| |||||||||||| || |    | |||||||| || |||||||||  || ||||| |||||     
T  24528586 ttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagcctct--ccatgatccattggaccacctgctattagttttctattatcg 24528683  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
      |||| ||  |||||||||||||||||||  | |||||||||  || ||| | ||||||||||||||||    
T  24528684 aaccacccaacatttatgtccacgaaccaagcctaatagtgcttgtcatgagggggtgtgttaagagtcc 24528753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 38731803 - 38731714
Alignment:
Q  138 acctgctaccaggtttctgttatca-ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaag 226  Q
    |||||||| |||||||||| ||||| || ||| ||  ||||||||||| |||||||  |||||||||||| ||||||| |||||||||||    
T  38731803 acctgctatcaggtttctgctatcacgggcacccatcatttatgtccatgaaccaagcccaatagtgctggtcgtgaggggtgtgttaag 38731714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 8081287 - 8081220
Alignment:
Q  165 ccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||| ||| |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||||    
T  8081287 ccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 8081220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 20510841 - 20510751
Alignment:
Q  138 acctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagag 228  Q
    |||||||| |||||||||| |||  |||||| | | |||||||||||||||||||  ||||||||| ||||||||| | |||||||||||||    
T  20510841 acctgctatcaggtttctgctattgggccaccccc-atttatgtccacgaaccaagcccaatagtgatgatcgtgagggggtgtgttaagag 20510751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 33337435 - 33337344
Alignment:
Q  141 tgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    ||||| |||||||| |  ||| |||||| ||| |||||||||||||||||||  |||||||||||| || ||| | ||||||||||||||||    
T  33337435 tgctatcaggtttccgccatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcatgagggggtgtgttaagagtcc 33337344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 1028431 - 1028381
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctat 118  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||| ||||    
T  1028431 tggggttgtgttaggcccaaccaccatttctaacatggtatcagagcctat 1028381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 8081151 - 8081101
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  8081151 ttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagag 8081101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 17016426 - 17016385
Alignment:
Q  72 gttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  17016426 gttgtgttaggcccaaccacgatttctaacatggtatcagag 17016385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 13296725 - 13296764
Alignment:
Q  70 gggttgtgttaagcccaaccacgatttctaaaatggtatc 109  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  13296725 gggttgtgttaggcccaaccacgatttctaagatggtatc 13296764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 18885373 - 18885440
Alignment:
Q  165 ccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgaga-ggtgtgttaagagtcc 231  Q
    |||| ||| ||||||||| | |||||||  |||||||||||| |||||||| ||||||||||||||||    
T  18885373 ccacccaccatttatgtctatgaaccaagcccaatagtgctggtcgtgagagggtgtgttaagagtcc 18885440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 20225079 - 20225134
Alignment:
Q  55 caagttgattttatggggttgtgttaagcccaaccacgatttctaaaatggtatca 110  Q
    ||||| |||||| ||||||||||||| |  |||||||||||||||||||| |||||    
T  20225079 caagtcgattttgtggggttgtgttaggttcaaccacgatttctaaaatgatatca 20225134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 1564605 - 1564555
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| || |||||||||||||||| ||| ||||||||    
T  1564605 ttttgtggggttgtgttaggctcaaccacgatttctaagatgatatcagag 1564555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 26137391 - 26137333
Alignment:
Q  55 caagttgattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    ||||||| |||| |||| || ||||| |||||||||||||||||||  |||||||||||    
T  26137391 caagttggttttgtgggattatgttaggcccaaccacgatttctaaggtggtatcagag 26137333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 30770229 - 30770155
Alignment:
Q  158 tatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||| |||||| ||| |||||||||||||||||||  ||||||| |||| | |||| | ||||||||||||||||    
T  30770229 tatcgggccacccaccatttatgtccacgaaccaagcccaatagcgctggttgtgagggggtgtgttaagagtcc 30770155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 17352597 - 17352540
Alignment:
Q  175 tttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    ||||||||||||||||||  |||||| ||||| |||| | ||||||||||||||||||    
T  17352597 tttatgtccacgaaccaagcccaataatgctggtcgtaaggaggtgtgttaagagtcc 17352540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 21209746 - 21209709
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  21209746 ttttgtggggttgtgttaagcacaaccacgatttctaa 21209709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 25258132 - 25258095
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  25258132 ttttgtggggttgtgttaggcccaaccacgatttctaa 25258095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 25321922 - 25321885
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  25321922 ttttgtggggttgtgttaggcccaaccacgatttctaa 25321885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 27133031 - 27132994
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  27133031 ttttgtggggttgtgttaggcccaaccacgatttctaa 27132994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 28510137 - 28510174
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  28510137 ttttgtggggttgtgttaggcccaaccacgatttctaa 28510174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 41666795 - 41666758
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  41666795 ttttgtggggttgtgttaggcccaaccacgatttctaa 41666758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 6415594 - 6415642
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||||||||||||  | |||||| ||||| |||||||||||||||||||    
T  6415594 tggggttgtgttagcctcaaccatgatttttaaaatggtatcagagtct 6415642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 13353247 - 13353414
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||| |||||||| |||||||||||| || |    |||||||||| |  |||||| || |||||||| | ||||     
T  13353247 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctcc--aagatccattgggccacctgttatcaggtttccgctatcg 13353344  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||||    
T  13353345 ggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 13353414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 33796372 - 33796539
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||| |||||||| |||||||||||| || |    |||||||||| |  |||||| || |||||||| | ||||     
T  33796372 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctcc--aagatccattgggccacctgttatcaggtttccgctatcg 33796469  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||||    
T  33796470 ggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 33796539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 4868851 - 4868683
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||      |||||||  | |  ||||||||| |||||||| ||||||     
T  4868851 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcc-aagatccgctgggccacctgctatcaggtttccgttatcg 4868753  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||||    
T  4868752 ggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 4868683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 6542981 - 6542815
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||||||||||||  ||||||||||||||| || |||||||||||| || |  | |||||||||| | |||| ||||| |||||||| ||||||     
T  6542981 ttttgtggggttgtgttagacccaaccacgatttcaaagatggtatcagagcctct--tcaagatccattgggtcacttgctatcaggtttccgttatcg 6542884  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagag-gtgtgttaagagtc 230  Q
    || ||| ||| ||||||||||||||||||| |||||||  | || ||||||| | ||||||||||||||    
T  6542883 ggtcacccaccatttatgtccacgaaccaagtccaatatcgttggtcgtgagggtgtgtgttaagagtc 6542815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 12330209 - 12330050
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacac 170  Q
    |||||||||| ||||||||||||||||||| |||||||||||| || |    |||||||||| |  ||||||||| |||||||| |  ||| |||||| |    
T  12330209 ggttgtgttaggcccaaccacgatttctaatatggtatcagagcctctcc--aagatccattgggccacctgctatcaggtttccgccatcgggccaccc 12330112  T
Q  171 actatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    || |||||||||||||||||||  |||||  ||||| |||||| | ||||||||||||||||    
T  12330111 accatttatgtccacgaaccaagcccaattatgctggtcgtgagggggtgtgttaagagtcc 12330050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 33494585 - 33494752
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||| |||||||| |||||||||||  || |  |  ||||||||| | |||||||||| ||||||||   ||||     
T  33494585 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagaacctct--tcgagatccattgggtcacctgctatcaggtttccactatcg 33494682  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag-aggtgtgttaagagtcc 231  Q
    |||||| |||  ||||||| ||||||||||  |||||||||||| |||||||  ||||||||||||||||    
T  33494683 ggccacccaccgtttatgttcacgaaccaagcccaatagtgctggtcgtgagttggtgtgttaagagtcc 33494752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 17147872 - 17147766
Alignment:
Q  126 atccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgtta 224  Q
    ||||||| | |||||||||| |||||||| | ||||||| ||| ||| |||||||||||||||||||  |||||||||||| | |||| | |||||||||    
T  17147872 atccattgggtcacctgctatcaggtttccgctatcaggtcacccaccatttatgtccacgaaccaagcccaatagtgctggttgtgagggggtgtgtta 17147773  T
Q  225 agagtcc 231  Q
    |||||||    
T  17147772 agagtcc 17147766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 231
Target Start/End: Original strand, 3680050 - 3680224
Alignment:
Q  55 caagttgattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttc 154  Q
    ||||| |||||| ||||||||||||| |||||||||| |||||||| |||||||||||  || |    || ||||||  | ||||||||||  |||||||    
T  3680050 caagtcgattttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagaccctct--ccaaaatccatcgggtcacctgctattaggtttc 3680147  T
Q  155 tgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtcc 231  Q
     | |||| || ||  ||| |||||||||||| ||||||  ||||||||| || ||||||| || |||||||||||||    
T  3680148 cgctatcgggtcatccaccatttatgtccacaaaccaagcccaatagtgttggtcgtgaggggggtgttaagagtcc 3680224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 230
Target Start/End: Complemental strand, 6400822 - 6400727
Alignment:
Q  136 tcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtc 230  Q
    |||||||||| |||||||||| |||| | |||| ||| |||||||||||||||||||  |||||||||||| |||||| | || ||||||||||||    
T  6400822 tcacctgctatcaggtttctgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggggtgttaagagtc 6400727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 9705066 - 9705232
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||| |||||||| |||||||||||| ||      |||||   || |  ||||||||| ||||||||  |||||     
T  9705066 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctcctcc-aagatttgttgggccacctgctatcaggtttccattatcg 9705164  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||  |||||| ||||||||||||| |||||| | ||||||||||||||||    
T  9705165 ggccacccaccatttatgtcca--aaccaagtccaatagtgctggtcgtgagggggtgtgttaagagtcc 9705232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 192
Target Start/End: Complemental strand, 6237737 - 6237618
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacac 170  Q
    ||||||||||  | ||| ||||| |||||| ||||||| ||||||| |  | |||||||||| || ||| |||||||||||||| | |||| | |||| |    
T  6237737 ggttgtgttagactcaatcacgacttctaagatggtattagagtctct--tcaagatccattggaccacttgctaccaggtttccgctatcggaccaccc 6237640  T
Q  171 actatttatgtccacgaaccaa 192  Q
    || |||||||||||||||||||    
T  6237639 accatttatgtccacgaaccaa 6237618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 8026435 - 8026485
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  8026435 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 8026485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 30256858 - 30256908
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  30256858 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 30256908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 8001595 - 8001535
Alignment:
Q  56 aagttgattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||| |||||| | ||||||||||| |||||||||| |||||||| |||||||||||||||    
T  8001595 aagtcgattttgttgggttgtgttaggcccaaccacaatttctaagatggtatcagagtct 8001535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 20373615 - 20373667
Alignment:
Q  62 attttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagt 114  Q
    ||||| ||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  20373615 attttgtggggttgtgttaggcccaaccacgatttataagatggtatcagagt 20373667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 27653263 - 27653313
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| |||| |||||||| ||||||||||||||||||| ||||||||||||    
T  27653263 ttttgtgggattgtgttaggcccaaccacgatttctaatatggtatcagag 27653313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 30256624 - 30256674
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| |||||||||||||||||||  |||||||||||    
T  30256624 ttttgtggggttgtgttaggcccaaccacgatttctaaggtggtatcagag 30256674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 2736430 - 2736318
Alignment:
Q  73 ttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacacac 172  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||  | | |||||| ||| |  |||||||||  ||||||| |||||| | |||| ||     
T  2736430 ttgtgttaagcctaaccacgatttctaaaatgatatcagagcct-gattcaagatctattgggccacctgctattaggtttccgttatcggaccacccat 2736332  T
Q  173 tatttatgtccacg 186  Q
     |||||||||||||    
T  2736331 catttatgtccacg 2736318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 21690766 - 21690815
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatca 110  Q
    |||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  21690766 gattttgtggggttgtgttaggctcaaccacgatttctaatatggtatca 21690815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 31961047 - 31961156
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagagg-tgtg 221  Q
    |||||||||| |  ||||||||| |||||||||| ||||  ||| | ||| ||||||||||||| |||||  |||||||| ||  ||||||| || ||||    
T  31961047 aagatccattgggccacctgctatcaggtttctgctatcgtgccccccaccatttatgtccacggaccaagcccaatagtactagtcgtgaggggatgtg 31961146  T
Q  222 ttaagagtcc 231  Q
    ||||||||||    
T  31961147 ttaagagtcc 31961156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 24554163 - 24554327
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||| |||||||||  | ||||||  |||||||| ||||||||||||| | |  | |||||||||| |  ||||||||| |||||| | | |||||    
T  24554163 ttttgtggagttgtgttagtctcaaccataatttctaacatggtatcagagtgtct--tcaagatccattggc-cacctgctatcaggttaccgctatca 24554259  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtc 230  Q
    | |||| ||| ||||||||| |||||||||   ||||| ||||||| ||| |  ||||||||||||||    
T  24554260 gaccacccaccatttatgtcaacgaaccaagctcaataatgctgattgtggggagtgtgttaagagtc 24554327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 8566997 - 8566958
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaa 102  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  8566997 ttttgtggggttgtgttaggcccaaccacgatttctaaaa 8566958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 33631785 - 33631694
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
    |||||| ||| | ||||||| || |||||||||| |||| || ||| ||| |||||||||||| ||||||   ||||||||||| |||||||    
T  33631785 aagatctattgggtcacctgatatcaggtttctgctatcgggacacccaccatttatgtccactaaccaagctcaatagtgctggtcgtgag 33631694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 4161884 - 4161847
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  4161884 ttttgtggggttgtgttaggcccaaccacgatttctaa 4161847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 4223504 - 4223467
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  4223504 ttttgtggggttgtgttaggcccaaccacgatttctaa 4223467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 4868615 - 4868578
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  4868615 ttttgtggggttgtgttaggcccaaccacgatttctaa 4868578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 5572649 - 5572604
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    ||||||| ||||  ||||||||||||||||||| ||||||||||||    
T  5572649 tggggttttgttcggcccaaccacgatttctaatatggtatcagag 5572604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 8026650 - 8026687
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  8026650 ttttgtggggttgtgttaggcccaaccacgatttctaa 8026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 11721951 - 11721988
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  11721951 ttttgtggggttgtgttaggcccaaccacgatttctaa 11721988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 15082182 - 15082133
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcaga 112  Q
    |||| |||| |||||||| |||||| |||||||||||| |||||||||||    
T  15082182 ttttgtgggattgtgttaggcccaaacacgatttctaatatggtatcaga 15082133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 5572422 - 5572386
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttcta 99  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  5572422 ttttgtggggttgtgttaggcccaaccacgatttcta 5572386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 20301315 - 20301472
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacac 170  Q
    |||||||||| ||||||||||||||||||| |||||||||||| || |  | |||||||||| |  ||||||||| |||||||| | |||| | |||| |    
T  20301315 ggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct--tcaagatccattgggccacctgctatcaggtttccgctatcggaccaccc 20301412  T
Q  171 actatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagt 229  Q
    || ||||||||| |||||||||  |||||||||||| |||||| | ||||||||||||||    
T  20301413 accatttatgtctacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagt 20301472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 21087947 - 21088104
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacac 170  Q
    |||||||||| ||||||||||||||||||| |||||||||||| || |  | |||||||||| |  ||||||||| |||||||| | |||| | |||| |    
T  21087947 ggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct--tcaagatccattgggccacctgctatcaggtttccgctatcggaccaccc 21088044  T
Q  171 actatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagt 229  Q
    || ||||||||| |||||||||  |||||||||||| |||||| | ||||||||||||||    
T  21088045 accatttatgtctacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagt 21088104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 41790711 - 41790871
Alignment:
Q  70 gggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccaca 169  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| || |  | |||||||||| |  ||||||||| |||||||| | ||||  |||||     
T  41790711 gggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct--tcaagatccattgggccacctgctatcaggtttccgctatcgagccacc 41790808  T
Q  170 cactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    ||| ||||||||||| |||||||  |||| ||||||| |||||| | ||||||||||||||||    
T  41790809 caccatttatgtccatgaaccaagcccaagagtgctggtcgtgagggggtgtgttaagagtcc 41790871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 11232467 - 11232300
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||| |||||||| |||||||||||| || |    |||||||||| |  |||||| || |||||||| | ||||     
T  11232467 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctcc--aagatccattgggccacctgttatcaggtttccgctatcg 11232370  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
     | ||| ||| |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||||    
T  11232369 agtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 11232300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 39052967 - 39052800
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||| ||||||||||| ||||||| |||| || |    |||||||||| |  | ||||||| |||||||| | ||||     
T  39052967 ttttgtggggttgtgttaggcccaacaacgatttctaagatggtattagagcctctcc--aagatccatttggccccctgctatcaggtttccgctatcc 39052870  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  ||||||||| || |||||| | ||||||||||||||||    
T  39052869 ggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgttaagagtcc 39052800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 5932222 - 5932055
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||| |||| ||| |||||||||||| || |    |||||||||| || ||||| ||| || ||||| ||||||     
T  5932222 ttttgtggggttgtgttaggcccaaccaccatttttaagatggtatcagagcctctcc--aagatccattggaccacctactatcacgtttccgttatcg 5932125  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgaga-ggtgtgttaagagtcc 231  Q
    |||||| ||| ||||||||| || ||||||   ||||||||||| |||||| | ||||||||||||||||    
T  5932124 ggccacccaccatttatgtcgacaaaccaagcgcaatagtgctggtcgtgaaagggtgtgttaagagtcc 5932055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 20094832 - 20094666
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||| ||| ||||||||||||||| |||  |||||||||||| | |  | |||||||||| |  ||||| ||| |||||||  | |||||    
T  20094832 ttttgtggggttgt-ttaggcccaaccacgatttataagttggtatcagagtttct--tcaagatccattgggccacctcctatcaggttttcgctatca 20094736  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  |||||||||||| |||||| | || |||||||||||||    
T  20094735 ggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggcgtgttaagagtcc 20094666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 31197668 - 31197825
Alignment:
Q  70 gggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccaca 169  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||| || |     ||||||||| |  ||||||||| |||||||| | |||| | ||||     
T  31197668 gggttgtgttaggcccaacca-gatttctaagatggtatcagagcctctccg--agatccattgggccacctgctatcaggtttccgctatcggaccacc 31197764  T
Q  170 cactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtcc 231  Q
    ||| |||||||||||||||||||   ||||||||||||| ||||| || |||||||||||||    
T  31197765 caccatttatgtccacgaaccaagctcaatagtgctgattgtgag-ggggtgttaagagtcc 31197825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 3157597 - 3157431
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| || ||||||| |||| ||| ||| |||||||| || |    || ||||||| || ||||||||| |||||||  | ||||     
T  3157597 ttttgtggggttgtgttaggctcaaccaccatttataagatgatatcagagcctctcc--aaaatccattggaccacctgctatcaggttttcgctatcg 3157500  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag-aggtgtgttaagagtc 230  Q
    || ||| ||| |||||||||||||||||||  |||||||||||| |||||||  |||||||||||||||    
T  3157499 ggacacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagtgggtgtgttaagagtc 3157431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 18004309 - 18004202
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgt 222  Q
    |||||||||| |  ||||||||| |||||||| | |||| |||||| ||| |||||||||||||||||||  | |||||||||| ||||||| || ||||    
T  18004309 aagatccattgggccacctgctatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcctaatagtgctggtcgtgag-ggggtgt 18004211  T
Q  223 taagagtcc 231  Q
    |||||||||    
T  18004210 taagagtcc 18004202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 39052738 - 39052643
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    ||||||||| |||||||| | |||| |||||| ||| |||||||||||||||||||  ||||||||| || |||||| | ||||||||||||||||    
T  39052738 cacctgctatcaggtttccgctatccggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgttaagagtcc 39052643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 3157210 - 3157116
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtc 230  Q
    ||||||||| |||||||| | |||| || ||| ||| |||||||||||||||||||  |||||||||||| |||||| | |||||||||||||||    
T  3157210 cacctgctatcaggtttccgctatcgggacacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtc 3157116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 39960075 - 39960169
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtcc 231  Q
    ||||||||| |||||||| | ||||  || || ||| |||||||||||||||||||  |||||||||||| ||||||| || |||||||||||||    
T  39960075 cacctgctatcaggtttccgctatcgagctacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggggtgttaagagtcc 39960169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 8084182 - 8084340
Alignment:
Q  72 gttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacaca 171  Q
    |||||||||  |||||||||||||||||| |||||||||||| || |    |||||||||| |  ||| ||||| |||||||  | |||  |  ||| ||    
T  8084182 gttgtgttagacccaaccacgatttctaagatggtatcagagcctctcc--aagatccattgggccacatgctatcaggttttcgctattggatcaccca 8084279  T
Q  172 ctatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    | |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||||    
T  8084280 ccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 8084340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 15042924 - 15042795
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||| ||||| || || |    ||||| |||| |  ||||||||| |||||||| | |||||    
T  15042924 ttttgtggggttgtgttaggcctaaccacgatttctaagatgttatcatagcctctctccaagattcattgggccacctgctatcaggtttccgctatca 15042825  T
Q  163 ggccacacactatttatgtccacgaaccaa 192  Q
    |||||| |||  ||||||||||||||||||    
T  15042824 ggccacccaccgtttatgtccacgaaccaa 15042795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 214
Target Start/End: Original strand, 10615437 - 10615589
Alignment:
Q  60 tgattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgtta 159  Q
    ||||||| ||||||||||||| | | |||||  |||||||| |||||||||||| || |    ||||||||||  | |||||| || |||||||| | ||    
T  10615437 tgattttgtggggttgtgttaggtcaaaccataatttctaagatggtatcagagcctctcc--aagatccattgtaccacctgatatcaggtttccgcta 10615534  T
Q  160 tcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
    || || |||  ||||||||| |||||||||||| ||||||||||||  |||||||    
T  10615535 tcgggtcaccaactatttatctccacgaaccaagtccaatagtgctagtcgtgag 10615589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 35682996 - 35682889
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggt-gtg 221  Q
    |||||||||| |  |||||||||  ||||||| | |||| |||||| ||| |||||||||||||||||||   ||||||||||| ||||||| ||| |||    
T  35682996 aagatccattgggccacctgctattaggtttccgctatcgggccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgaggggtggtg 35682897  T
Q  222 ttaagagt 229  Q
    ||||||||    
T  35682896 ttaagagt 35682889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 19256858 - 19256808
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  19256858 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 19256808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 222
Target Start/End: Complemental strand, 422493 - 422334
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttat 160  Q
    |||||| ||||||||||||  |||||||||| |||||||| |||||||||||| ||| ||  ||||| | || |  ||||||||| |||||||| | | |    
T  422493 gattttgtggggttgtgtttggcccaaccacaatttctaagatggtatcagagccta-aaacaagat-cgttgggccacctgctatcaggtttccgctct 422396  T
Q  161 caggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgt 222  Q
    | |||||| ||| |||| |||||||||||||| | ||||| || || || ||||||| ||||    
T  422395 cgggccacccaccatttttgtccacgaaccaagttcaataatgttggtcatgagaggggtgt 422334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 12317089 - 12317142
Alignment:
Q  60 tgattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    ||||||| |||| |||||||| ||||||||||||||||||| ||||||||||||    
T  12317089 tgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagag 12317142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 189
Target Start/End: Original strand, 8716158 - 8716285
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttat 160  Q
    |||||| |||||||||||||  |||||||| ||||||||| |||||||||||| || |  ||||||||||||   |||| |||||  ||||||| | |||    
T  8716158 gattttgtggggttgtgttagacccaaccaagatttctaatatggtatcagagcct-tcgttaagatccattgagtcacatgctattaggtttccgctat 8716256  T
Q  161 caggccacacactatttatgtccacgaac 189  Q
    | || |||  || ||||||||||||||||    
T  8716257 cgggtcaccgaccatttatgtccacgaac 8716285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 42049627 - 42049575
Alignment:
Q  162 aggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||| || |||||||    
T  42049627 aggccacccactatttatgtccacgaaccaagtccaatagtgttgctcgtgag 42049575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 5675935 - 5675840
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    ||||||||| || ||||  | |||| || ||| ||| ||||||||||||||||||| ||||||||||||| ||| || ||||||||| ||||||||    
T  5675935 cacctgctatcaagttttcgctatcgggtcacccaccatttatgtccacgaaccaagtccaatagtgctggtcgagaggaggtgtgtaaagagtcc 5675840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 10884117 - 10884160
Alignment:
Q  70 gggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||    
T  10884117 gggttgtgttaggcccaaccacgatttctaagatggtatcagag 10884160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 28213136 - 28213093
Alignment:
Q  69 ggggttgtgttaagcccaaccacgatttctaaaatggtatcaga 112  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  28213136 ggggttgtgttaggcccaaccacgatttctaatatggtatcaga 28213093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 4828114 - 4828164
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  4828114 ttttgtggggttgtgttaggcccaaccacgatctctaatatggtatcagag 4828164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 11232232 - 11232182
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| |||||||||| |||||||| ||||||||||||    
T  11232232 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagag 11232182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 17469864 - 17469914
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| || |||||||||||||||| ||||||||||||    
T  17469864 ttttgtggggttgtgttaggctcaaccacgatttctaatatggtatcagag 17469914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 24532459 - 24532409
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  24532459 ttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagag 24532409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 34842724 - 34842774
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| || |||||||||||||||| ||||||||||||    
T  34842724 ttttgtggggttgtgttaggctcaaccacgatttctaatatggtatcagag 34842774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 36917477 - 36917427
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| |||||||||||||||| ||||||| |||||||| ||||||||||||    
T  36917477 ttttgtggggttgtgttaagcacaaccaccatttctaagatggtatcagag 36917427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 5590398 - 5590357
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcaga 112  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  5590398 ggttgtgttaggcccaaccacaatttctaaaatggtatcaga 5590357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 22638217 - 22638180
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| |||||||||||||||||||||||||||||||||    
T  22638217 ttttgtggggttgtgttaagcccaaccacgatttctaa 22638180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 39743573 - 39743614
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaa 102  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  39743573 gattttgtggggttgtgttaggcccaaccacgatttctaaaa 39743614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 5676073 - 5675945
Alignment:
Q  84 ccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtcc 183  Q
    ||||||||||||||||| ||| ||||||||||| |  | ||||| || |||  ||||||||| |||||||  | |||  || ||| ||| |||||||||     
T  5676073 ccaaccacgatttctaagatgatatcagagtctct--tcaagattcactaggccacctgctatcaggttttcgatattgggtcacccaccatttatgtct 5675976  T
Q  184 acgaaccaattccaatagtgctgatcgtgag 214  Q
    |||||||||  |||||| ||||| |||||||    
T  5675975 acgaaccaagcccaatactgctggtcgtgag 5675945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 10615194 - 10615144
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| |||||||| ||||||||||||||| |||||||| ||||| ||||||    
T  10615194 ttttgtggggttgcgttaagcccaaccacaatttctaagatggtgtcagag 10615144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 16050075 - 16050125
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| |||||||||||||  ||||||||||| |||||| ||||||||||||    
T  16050075 ttttgtggggttgtgttagacccaaccacgacttctaatatggtatcagag 16050125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 26208287 - 26208237
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||||||||||||||| | ||| |||| |||||||| ||||||||||||    
T  26208287 ttttatggggttgtgttaggtccatccacaatttctaagatggtatcagag 26208237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 37001272 - 37001322
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||| ||||||||| |||||||||||||||| || ||||||||||||    
T  37001272 ttttgtggagttgtgttaggcccaaccacgatttcaaagatggtatcagag 37001322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 12688176 - 12688285
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtg 221  Q
    |||||||||| |  ||||||||| |||||||||  |||  |||||| ||| |||||||||||||||| ||  ||||||||| || || ||| | ||||||    
T  12688176 aagatccattgggccacctgctatcaggtttcttctattgggccacccaccatttatgtccacgaactaagcccaatagtgatggtcatgagggggtgtg 12688275  T
Q  222 ttaagagtcc 231  Q
     |||||||||    
T  12688276 ataagagtcc 12688285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 19256624 - 19256587
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  19256624 ttttgtggggttgtgttaggcccaaccacgatttctaa 19256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 24075344 - 24075307
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  24075344 ttttgtggggttgtgttaggcccaaccacgatttctaa 24075307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 27205010 - 27205047
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  27205010 ttttgtggggttgtgttaggcccaaccacgatttctaa 27205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 27205108 - 27205145
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  27205108 ttttgtggggttgtgttaggcccaaccacgatttctaa 27205145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 27205206 - 27205243
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  27205206 ttttgtggggttgtgttaggcccaaccacgatttctaa 27205243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 34653196 - 34653233
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  34653196 ttttgtggggttgtgttaggcccaaccacgatttctaa 34653233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 35682819 - 35682782
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  35682819 ttttgtggggttgtgttaggcccaaccacgatttctaa 35682782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 37001510 - 37001547
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  37001510 ttttgtggggttgtgttaggcccaaccacgatttctaa 37001547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 39960238 - 39960275
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  39960238 ttttgtggggttgtgttaggcccaaccacgatttctaa 39960275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 42846643 - 42846606
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  42846643 ttttgtggggttgtgttaggcccaaccacgatttctaa 42846606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 29005911 - 29005963
Alignment:
Q  64 tttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||||| ||||||||||  |||||||||||||||||| | ||||| |||||||    
T  29005911 tttatgaggttgtgttagacccaaccacgatttctaagacggtattagagtct 29005963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 25620182 - 25620349
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| || |    |||||||||| |  ||||||||| |||||||| | |||      
T  25620182 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct--ccaagatccattgggccacctgctatcaggtttccgctattg 25620279  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtg-agaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  ||||||||| || ||||| ||  |||||||||||||||    
T  25620280 ggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgaaggtgtgtgttaagagtcc 25620349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 29469651 - 29469818
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| || |    |||||||||| |  |||||| || |||| ||| | ||||     
T  29469651 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct--ccaagatccattgggccacctgttatcaggcttccgctatcg 29469748  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| ||| ||||||||||||||| |||  |||||||||||| |||||| | ||||||||||||||||    
T  29469749 ggccacccaccatttatgtccacgaatcaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 29469818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 231
Target Start/End: Original strand, 1596644 - 1596806
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggcca 167  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||||| || |    |||||||||| |  ||| || || |||||||| | |||| |||||    
T  1596644 tggggttgtgttaggcctaaccacaatttctaagatggtatcagagcctctcc--aagatccattgggccacatgttatcaggtttccgctatcgggcca 1596741  T
Q  168 cacactatttatgtccacgaaccaattccaatagtgctgatcgtgagag-gtgtgttaagagtcc 231  Q
    | ||| |||||||||||||||||||  |||||||||||| ||||||||| |||||||||||||||    
T  1596742 cccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagagtgtgtgttaagagtcc 1596806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 2404446 - 2404280
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||||| ||| |||||||||| |||||||||||||||| |||||||||||| || |  |  | ||||||| | |||||||||| |||||||| | |||      
T  2404446 ttttatagggctgtgttaagctcaaccacgatttctaagatggtatcagagcctct--tcgaaatccattgggtcacctgctatcaggtttccgctattg 2404349  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtcc 231  Q
    | ||||  ||  ||||||||||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  2404348 gaccacctaccgtttatgtccacgaaccaagcgcaatagtgctggtcgtgagaggtgtgttaagagtcc 2404280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 230
Target Start/End: Complemental strand, 36277272 - 36277098
Alignment:
Q  55 caagttgattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttc 154  Q
    ||||| |||||| |||||||||||||  |||||||||||||||||| ||| |||||||| || |    |||||||||| |  ||||| ||| ||||||||    
T  36277272 caagtcgattttgtggggttgtgttagtcccaaccacgatttctaagatgttatcagagcctctcc--aagatccattgggccacctactatcaggtttc 36277175  T
Q  155 tgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtc 230  Q
     | |||| | |||| ||| |||||||||||||||||||  |||||||||||| |||||| | |||||||||||||||    
T  36277174 cgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtc 36277098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 229
Target Start/End: Original strand, 21861340 - 21861505
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||| |||||||| |||||||||| |||||||| |||||||||||| || |    |||||||||| |  |||||| || |||||||| | ||||     
T  21861340 ttttgtgggattgtgttaggcccaaccaccatttctaagatggtatcagagcctctcc--aagatccattgggccacctgttatcaggtttccgctatcg 21861437  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagt 229  Q
    |||||| ||| |||||||||||||||||||  | |||||||||| |||||| | ||||||||||||||    
T  21861438 ggccacccaccatttatgtccacgaaccaagcctaatagtgctggtcgtgagggggtgtgttaagagt 21861505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 33834237 - 33834404
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||| |||||||| |||||||||||| || |    |||||||||| |  ||||||||| |||||||    ||||     
T  33834237 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctct--ccaagatccattgggccacctgctatcaggttttccctatcg 33834334  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtg-agaggtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  ||||||||| || ||||| || |||| |||||||||||    
T  33834335 ggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgaaggggtgggttaagagtcc 33834404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 33996349 - 33996185
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||| ||||||||| ||||||||||||||||||| |||||||||||| || |       ||||||| |  ||||||||| |||||||| |  |||     
T  33996349 ttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcctctcc-----atccattgggccacctgctatcaggtttccgcaatcg 33996255  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagag-gtgtgttaagagtcc 231  Q
    |||||| ||| |||||||||||||||||||  ||||||||| |||||||||| | ||| |||||||||||    
T  33996254 ggccacccaccatttatgtccacgaaccaagcccaatagtgttgatcgtgagggtgtgagttaagagtcc 33996185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 4506978 - 4507142
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    ||||||||||||||||||  |||||| ||||||||||| || ||||||||| || |  | |||||||||| | |||||||||| ||| |||| |||||||    
T  4506978 ttttatggggttgtgttagacccaactacgatttctaagattgtatcagagccttt--tcaagatccattgggtcacctgctatcagatttccgttatca 4507075  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtc 230  Q
    | ||||  || | |||||||||| ||||||  | ||||||| || |||||||  ||||||||||||||    
T  4507076 gaccaccaaccagttatgtccacaaaccaa-cctaatagtgttggtcgtgaggagtgtgttaagagtc 4507142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 4886383 - 4886524
Alignment:
Q  71 ggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacac 170  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||| |    |||||||||| |  ||||||||| || ||||||  ||||  ||||| |    
T  4886383 ggttgtgttaggcccaaccacgatttctaagatggtatcagggtctct--ccaagatccattgggccacctgctatcaagtttctactatcgagccaccc 4886480  T
Q  171 actatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
    || |||||||||||||||||||  |||||||| ||| |||||||    
T  4886481 accatttatgtccacgaaccaagcccaatagtactggtcgtgag 4886524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 31892270 - 31892364
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtc 230  Q
    ||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||  |||||| || || |||||| | |||||||||||||||    
T  31892270 cacctgctatcaggtttccgttatcaggccacccaccatttatgtccacgaaccaagcccaataatgatggtcgtgagggggtgtgttaagagtc 31892364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 40746233 - 40746139
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagtcc 231  Q
    ||||||||| |||||||  ||||||   |||| ||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||    
T  40746233 cacctgctatcaggttttcgttatcgaaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggtgtgttaagagtcc 40746139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 3519923 - 3519831
Alignment:
Q  140 ctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    |||||| |||||||| | |||| |||||| ||| |||||||||||||||||||  |||||| ||||| |||||| | ||||||||||||||||    
T  3519923 ctgctatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaataatgctggtcgtgagggggtgtgttaagagtcc 3519831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 40121962 - 40121907
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctat 118  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  40121962 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctat 40121907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 48661583 - 48661455
Alignment:
Q  73 ttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacacac 172  Q
    ||||||||  |||||||||||||||||| ||| |||||||| || |  |||||| |||||    ||||||||| |||||||| | | || |||||| |||    
T  48661583 ttgtgttagacccaaccacgatttctaatatgatatcagagcctct--ttaagaaccattgagccacctgctatcaggtttccgctttcgggccacccac 48661486  T
Q  173 tatttatgtccacgaaccaattccaatagtg 203  Q
     |||||||||||||||||||  |||||||||    
T  48661485 catttatgtccacgaaccaagcccaatagtg 48661455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 31257305 - 31257255
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  31257305 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 31257255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 229
Target Start/End: Complemental strand, 36993325 - 36993182
Alignment:
Q  84 ccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccacacactatttatgtcc 183  Q
    ||||||| ||||||||| |||||||||||| || |  | |||||||||| |  ||| ||||| ||| |||| | |||  | |||| |||||||||||| |    
T  36993325 ccaaccatgatttctaagatggtatcagagcctct--tcaagatccattgggccacgtgctatcagatttccgctattggaccacccactatttatgttc 36993228  T
Q  184 acgaaccaattccaatagtgctgatcgtgagaggtgtgttaagagt 229  Q
    ||||| ||| | ||||||||||| |||||||  |||||||||||||    
T  36993227 acgaatcaagttcaatagtgctggtcgtgaggtgtgtgttaagagt 36993182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 44874618 - 44874527
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttc 154  Q
    ||||||||||| |||||||| ||| |||||| || ||||| ||||||||||||||| |  | |||||||||| | |||||||||| ||||||||    
T  44874618 gattttatgggcttgtgttaggccaaaccacaatgtctaagatggtatcagagtctct--tcaagatccattgggtcacctgctatcaggtttc 44874527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 10882272 - 10882227
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  10882272 tggggttgtgttaggcccaaccacgatttctaagatggtatcagag 10882227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 21821850 - 21821902
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||| |||| |||||||| ||||||||||||||||||| ||||||||||||    
T  21821850 gattttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagag 21821902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 6782907 - 6782957
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| || |||||||||||||||| ||||||||||||    
T  6782907 ttttgtggggttgtgttaggctcaaccacgatttctaacatggtatcagag 6782957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 17202225 - 17202275
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  17202225 ttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagag 17202275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 34027439 - 34027489
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  34027439 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtattagag 34027489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 43085583 - 43085538
Alignment:
Q  55 caagttgattttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||    
T  43085583 caagttggttttgtggggttgtgttaagctcaaccacgatttctaa 43085538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 2544485 - 2544437
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcag 111  Q
    |||| ||||||||||||| ||||||||||||||| ||| ||||||||||    
T  2544485 ttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcag 2544437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 40746309 - 40746361
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||||| ||||    
T  40746309 gattttgtggggttgtgttaggcccaaccacaatttctaatatggtattagag 40746361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 20305358 - 20305467
Alignment:
Q  85 caaccacgatttctaaaatggtatcagagtctataattaagatccattagat----cacctgctaccaggtttctgttatcaggccacacactatttatg 180  Q
    |||||||||||| ||| |||||||||||| || |  | |||||||||| |||    || |||||| |||||||| | |||| |||||| ||| |||||||    
T  20305358 caaccacgatttttaagatggtatcagagcctct--tcaagatccattggatgggtcatctgctatcaggtttccgctatcgggccacccaccatttatg 20305455  T
Q  181 tccacgaaccaa 192  Q
    ||||||||||||    
T  20305456 tccacgaaccaa 20305467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 3520005 - 3519928
Alignment:
Q  137 cacctgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
    ||||||||| | |||||  | |||| || ||| ||| |||||||||||||||||||  |||||||||||| |||||||    
T  3520005 cacctgctatctggttttcgctatcgggacacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgag 3519928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 6001695 - 6001658
Alignment:
Q  76 tgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  6001695 tgttaagtccaaccacgatttctaagatggtatcagag 6001658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 26239949 - 26239904
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||||||||||  ||||||||| |||||||| ||||||||||||    
T  26239949 tggggttgtgttagacccaaccacaatttctaagatggtatcagag 26239904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 26562111 - 26562058
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||| ||||||| ||||| || ||||||| |||||||| |||||||||||||||    
T  26562111 ttttgtggggttatgttaggctcaaccaccatttctaatatggtatcagagtct 26562058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 43075356 - 43075311
Alignment:
Q  55 caagttgattttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    ||||||| |||| |||||||||||| ||| ||||||||||||||||    
T  43075356 caagttggttttgtggggttgtgttgagctcaaccacgatttctaa 43075311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 48243475 - 48243422
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtct 116  Q
    |||| |||||||||||||  |||||||| ||||| ||| |||||||||||||||    
T  48243475 ttttgtggggttgtgttagacccaaccatgatttttaagatggtatcagagtct 48243422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 23796063 - 23796011
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||||||||| ||||||| || |||||| ||||| ||| ||||||||||||    
T  23796063 gattttatggggatgtgttaggctcaaccatgatttttaagatggtatcagag 23796011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 43688193 - 43688161
Alignment:
Q  68 tggggttgtgttaagcccaaccacgatttctaa 100  Q
    ||||||||||||| |||||||||||||||||||    
T  43688193 tggggttgtgttaggcccaaccacgatttctaa 43688161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 5786 - 5643
Alignment:
Q  69 ggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatcaggccac 168  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| || |    ||||||||||    ||||||||| |||||||| | |||| | ||||    
T  5786 ggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctcc--aagatccattgagccacctgctatcaggtttccgctatcggaccac 5689  T
Q  169 acactatttatgtccacgaaccaattccaatagtgctgatcgtgag 214  Q
     ||| |||||||||||||||||||  |||||||||||| |||||||    
T  5688 ccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgag 5643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 1962 - 2129
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| |||||||||| |||||||| |||||||||||| || |    |||||||||| |  |||||| || |||||||| | ||||     
T  1962 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctcc--aagatccattgggccacctgttatcaggtttccgctatcg 2059  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
     | ||| ||| |||||||||||||||||||  |||||||||||| |||||| | ||||||||||||||||    
T  2060 agtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 2129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 81888 - 82054
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| || |    |||||||||| ||  ||||| || ||||||||    |||     
T  81888 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct--ccaagatccattggactacctgttatcaggtttc-cacatcg 81984  T
Q  163 ggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
     ||||| ||| ||||||||||| |||||||  |||||||||||| |||||| | ||||||||||||||||    
T  81985 agccacgcaccatttatgtccatgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcc 82054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 5701 - 5862
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagagtctataattaagatccattagatcacctgctaccaggtttctgttatca 162  Q
    |||| |||||||||||||  |||||||||||||||||| |||||||||||| || |  | || ||||||| |  ||||||||| |||||||| ||||||     
T  5701 ttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagcctct--tcaaaatccattgggccacctgctatcaggtttccgttatcg 5798  T
Q  163 ggccacacactatttatgtccacgaaccaattcc-aatagtgctgatcgtgagaggtgtgttaa 225  Q
       ||| |||  |||||| |||||||||||  || |||| ||||| ||||||| ||||||||||    
T  5799 aatcacccaccgtttatgcccacgaaccaagcccaaataatgctggtcgtgaggggtgtgttaa 5862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 56505 - 56555
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  56505 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 56555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 14508 - 14617
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgt-tatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgt 220  Q
    |||||||||| || ||||||||| |||||||| |  |||| || ||| ||||||||||||||| |||||||  ||||||||| || |||||| | |||||    
T  14508 aagatccattggaccacctgctatcaggtttccgcctatcgggtcacccactatttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgt 14607  T
Q  221 gttaagagtc 230  Q
    ||||||||||    
T  14608 gttaagagtc 14617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 10842 - 10951
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgt-tatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgt 220  Q
    |||||||||| || ||||||||| |||||||| |  |||  || ||| ||||||||||||||| |||||||  ||||||||| || |||||| | |||||    
T  10842 aagatccattggaccacctgctatcaggtttccgcctattgggtcacccactatttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgt 10941  T
Q  221 gttaagagtc 230  Q
    ||||||||||    
T  10942 gttaagagtc 10951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 2616 - 2707
Alignment:
Q  141 tgctaccaggtttctgttatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgtgttaagagtcc 231  Q
    ||||| |||||||| | |||| |||||| | | ||||||||| |||||||||  | ||||||||||||||||| | ||||||||||||||||    
T  2616 tgctatcaggtttccgctatcgggccaccccccatttatgtctacgaaccaaacctaatagtgctgatcgtgagggggtgtgttaagagtcc 2707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 14349 - 14399
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| ||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  14349 ttttgtggggttgtgttaggcccaaccacgttttctaagatggtatcagag 14399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 13201 - 13310
Alignment:
Q  123 aagatccattagatcacctgctaccaggtttctgt-tatcaggccacacactatttatgtccacgaaccaattccaatagtgctgatcgtga-gaggtgt 220  Q
    |||||||||| || ||||||||| |||||||| |  |||  || ||| ||||||||||||||| |||||||  ||||||||| || |||||| | |||||    
T  13201 aagatccattggaccacctgctatcaggtttccgcctattgggtcacccactatttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgt 13300  T
Q  221 gttaagagtc 230  Q
    ||||||||||    
T  13301 gttaagagtc 13310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 20985 - 21022
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaa 100  Q
    |||| |||||||||||||||||||||||||||||||||    
T  20985 ttttgtggggttgtgttaagcccaaccacgatttctaa 21022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 24674 - 24622
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||||||| ||||| |||||||||||||| | |||||| ||||||||||||    
T  24674 gattttatggcgttgtattaagcccaaccacaaattctaagatggtatcagag 24622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 3509 - 3459
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||| |||||||||||||  ||||| |||||||||||| ||||||||||||    
T  3509 ttttgtggggttgtgttagacccaatcacgatttctaatatggtatcagag 3459  T

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Target: scaffold0766 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 98
Target Start/End: Original strand, 6318 - 6355
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttct 98  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  6318 gattttgtggggttgtgttaggcccaaccacgatttct 6355  T

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Target: scaffold0400 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 3891 - 3940
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcaga 112  Q
    |||| ||||||||||||| || ||||||| |||||||| |||||||||||    
T  3891 ttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcaga 3940  T

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Target: scaffold0365 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 4535 - 4584
Alignment:
Q  63 ttttatggggttgtgttaagcccaaccacgatttctaaaatggtatcaga 112  Q
    |||| ||||||||||||| || ||||||| |||||||| |||||||||||    
T  4535 ttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcaga 4584  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 41246 - 41194
Alignment:
Q  61 gattttatggggttgtgttaagcccaaccacgatttctaaaatggtatcagag 113  Q
    |||||| ||||||||| ||| || |||| ||||||||||| ||||||||||||    
T  41246 gattttgtggggttgtattaggctcaactacgatttctaagatggtatcagag 41194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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