View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0791_high_21 (Length: 453)
Name: NF0791_high_21
Description: NF0791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0791_high_21 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 360; Significance: 0; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 29 - 432
Target Start/End: Original strand, 2327051 - 2327454
Alignment:
| Q |
29 |
atttgaagtgtgtggttttggaagggttaaggcgtcatccaccagggcattttgtgttgcctcatgcaatgagcgatgatgtggttttgaatggttattt |
128 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2327051 |
atttgaagtgtgtggttttggaagggttgaggcgtcatccaccagggcattttgtgttgcctcatgcagtgagcgatgatgtggttttgaatggttattt |
2327150 |
T |
|
| Q |
129 |
ggtgcctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgtttgggaggatccaatggagtttaagccagaaaggtttttg |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2327151 |
ggtgcctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgtttgggaggatccaatggagtttaagccagaaaggtttttg |
2327250 |
T |
|
| Q |
229 |
aaggatgagacttttgatattacagggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaatttagctttgctcc |
328 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||| |
|
|
| T |
2327251 |
aaggatgagacttttgatattacagggagtaaagagatcaagatgatgccgtttggagctggtaggagaatttgtccgggatataatttagctttactcc |
2327350 |
T |
|
| Q |
329 |
atttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggtggccatgtcgatttgtcggaaaaatttgaattcaccgtgat |
428 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
2327351 |
atttggaatattttgtggctaatttggtttggaatttcgattggaaggttccggagggtggccatgtcgatttgtcagaaaaatttgaattcaccgtggt |
2327450 |
T |
|
| Q |
429 |
gatg |
432 |
Q |
| |
|
|||| |
|
|
| T |
2327451 |
gatg |
2327454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 29 - 389
Target Start/End: Original strand, 2330766 - 2331126
Alignment:
| Q |
29 |
atttgaagtgtgtggttttggaagggttaaggcgtcatccaccagggcattttgtgttgcctcatgcaatgagcgatgatgtggttttgaatggttattt |
128 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
2330766 |
atttgaagtgcgtggttttggaagggttgaggcgtcatccaccagggcatttcgtgttgcctcacgcagtgagcgaggatgtggttttgaatggttattt |
2330865 |
T |
|
| Q |
129 |
ggtgcctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgtttgggaggatccaatggagtttaagccagaaaggtttttg |
228 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2330866 |
ggtgcctaaagatgggacggtgaattttatggttgcagagatggggttggaccctcgtgtttgggaggatccaatggaatttaagccagaaaggtttttg |
2330965 |
T |
|
| Q |
229 |
aaggatgagacttttgatattacagggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaatttagctttgctcc |
328 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||||||||| | |
|
|
| T |
2330966 |
aaggatgagacttttgacattacaggaagtaaagagataaagatgatgccatttggagctgggaggagaatttgtcctggatataatttagctttgcttc |
2331065 |
T |
|
| Q |
329 |
atttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggtgg |
389 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
2331066 |
atttggaatattttgtggctaatttggtttggaatttcgattggaaggttcccgagggtgg |
2331126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 29 - 422
Target Start/End: Original strand, 2321197 - 2321591
Alignment:
| Q |
29 |
atttgaagtgtgtggttttggaagggttaaggcgtcatccaccaggg-cattttgtgttgcctcatgcaatgagcgatgatgtggttttgaatggttatt |
127 |
Q |
| |
|
|||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||| | || | ||| || |||||||||||||| ||||||| |
|
|
| T |
2321197 |
atttgaagtgcgtggttttggaagggatgaggcgtcatccaccaggggcattttgtgttggcacacacggtgaaagaggatgtggttttgaacggttatt |
2321296 |
T |
|
| Q |
128 |
tggtgcctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgtttgggaggatccaatggagtttaagccagaaaggttttt |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || | ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2321297 |
tggtgcctaaaaatgggacggtgaatttcatgctgtcggagatggcgtgggatcctcgtgtttgggaggatccaatggagtttaagccagaaaggttttt |
2321396 |
T |
|
| Q |
228 |
gaaggatgagacttttgatattacagggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaatttagctttgctc |
327 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2321397 |
gaaggatgagacttttgatattatagggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaatttagctttgctc |
2321496 |
T |
|
| Q |
328 |
catttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggtggccatgtcgatttgtcggaaaaatttgaattcac |
422 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| ||||| || |||| |||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
2321497 |
catttggaatattttgtggctaacttggtttggaatttcaattggcagcttccggagggtggccatgttgatttgtcggaaaaagatgaattcac |
2321591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 29 - 411
Target Start/End: Original strand, 2303496 - 2303878
Alignment:
| Q |
29 |
atttgaagtgtgtggttttggaagggttaaggcgtcatccaccagggcattttgtgttgcctcatgcaatgagcgatgatgtggttttgaatggttattt |
128 |
Q |
| |
|
||||||| ||||| |||||||||||||| |||||||||||||| ||||||||| ||||||| || || ||| || |||||||||||||| |||||||| |
|
|
| T |
2303496 |
atttgaaatgtgttgttttggaagggttgaggcgtcatccaccggggcattttctgttgccacacgcggtgaaagaggatgtggttttgaacggttattt |
2303595 |
T |
|
| Q |
129 |
ggtgcctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgtttgggaggatccaatggagtttaagccagaaaggtttttg |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
2303596 |
ggtgcctaaaaatgggacggtgaatttcatgctggcggagatggggtgggatcctcgtgtttgggaggatccaatggagtttaagccagaaaggttttgg |
2303695 |
T |
|
| Q |
229 |
aaggatgagacttttgatattacagggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaatttagctttgctcc |
328 |
Q |
| |
|
|||||||||| |||||| |||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
2303696 |
aaggatgagaattttgacattacagggagtaaggagataaagatgatgccgtttgaagctgaaaggagaatttgtcctgcacttaatttagctttgctcc |
2303795 |
T |
|
| Q |
329 |
atttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggtggccatgtcgatttgtcggaaaaa |
411 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
2303796 |
atttagaatattttgtggctaatttggtttggaatttcgattggaagcttccagagggcggctatgttgatttgtcggaaaaa |
2303878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 29 - 409
Target Start/End: Original strand, 2293883 - 2294263
Alignment:
| Q |
29 |
atttgaagtgtgtggttttggaagggttaaggcgtcatccaccagggcattttgtgttgcctcatgcaatgagcgatgatgtggttttgaatggttattt |
128 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||| ||| | ||| |||||| || || ||| || |||||||||||| | |||||||| |
|
|
| T |
2293883 |
atttgaagtgtgtggttttggaagggttgaggcgtcatccaccggggaaatttccgttgccacacgcggtgaaagaggatgtggttttggacggttattt |
2293982 |
T |
|
| Q |
129 |
ggtgcctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgtttgggaggatccaatggagtttaagccagaaaggtttttg |
228 |
Q |
| |
|
|||||||||||| ||||||||||||||| || |||| ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
2293983 |
ggtgcctaaaaacgggacggtgaatttcttgctggcggagatggcgttggatcctcgtgtttgggaggacccgttggagtttaagccagaaaggtttttg |
2294082 |
T |
|
| Q |
229 |
aaggatgagacttttgatattacagggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaatttagctttgctcc |
328 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2294083 |
aaggatgagacttttgacattacaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaatttagctttgctcc |
2294182 |
T |
|
| Q |
329 |
atttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggtggccatgtcgatttgtcggaaa |
409 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| |||||| |||||| |
|
|
| T |
2294183 |
atttggaatattttgtggctaacttggtttggaatttcgattggaaggttccagagggcgggcatgttgatttgacggaaa |
2294263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 29 - 409
Target Start/End: Original strand, 2310214 - 2310594
Alignment:
| Q |
29 |
atttgaagtgtgtggttttggaagggttaaggcgtcatccaccagggcattttgtgttgcctcatgcaatgagcgatgatgtggttttgaatggttattt |
128 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| | ||| | ||| |||||| || || ||| || |||||||||||| | |||||||| |
|
|
| T |
2310214 |
atttgaagtgtgtggttttggaagggttgaggcgtcatccatcggggaaatttccgttgccacacgcggtgaaagaggatgtggttttggacggttattt |
2310313 |
T |
|
| Q |
129 |
ggtgcctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgtttgggaggatccaatggagtttaagccagaaaggtttttg |
228 |
Q |
| |
|
|||||||||||| ||||||||||||||| | |||| ||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
2310314 |
ggtgcctaaaaacgggacggtgaatttctttctggcggagatggcgttggatcgtcgtgtttgggaggacccattggagtttaagccagaaaggtttttg |
2310413 |
T |
|
| Q |
229 |
aaggatgagacttttgatattacagggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaatttagctttgctcc |
328 |
Q |
| |
|
|||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2310414 |
aaggatgagacttttgtcattccaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaatttagctttgctcc |
2310513 |
T |
|
| Q |
329 |
atttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggtggccatgtcgatttgtcggaaa |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| |||||| |
|
|
| T |
2310514 |
atttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggcgggcatgttgatttgacggaaa |
2310594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 32 - 432
Target Start/End: Original strand, 2351075 - 2351475
Alignment:
| Q |
32 |
tgaagtgtgtggttttggaagggttaaggcgtcatccaccagggcattttgtgttgcctcatgcaatgagcgatgatgtggttttgaatggttatttggt |
131 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||| |||||| ||||||||| || || ||| || |||||| |||| || ||||||||||| |
|
|
| T |
2351075 |
tgaaatgtgtggttttggaagggttgaggcgtcatccaccggggcataatgtgttgccacacgcggtgacagaggatgtgctttttaacggttatttggt |
2351174 |
T |
|
| Q |
132 |
gcctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgtttgggaggatccaatggagtttaagccagaaaggtttttgaag |
231 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
2351175 |
gcctaaaaatgggacggtcaattttatggtggcagagatggggtgggatcctcgtgtttgggaggatccaatggagtttaagccagagaggtttttgaag |
2351274 |
T |
|
| Q |
232 |
gatgagacttttgatattacagggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaatttagctttgctccatt |
331 |
Q |
| |
|
||||| || ||||| ||||| |||||||||||||||||||||||||| ||||| | ||| |||||||| ||||||||| ||||||||||||||| || | |
|
|
| T |
2351275 |
gatgaaacatttgacattacggggagtaaagagataaagatgatgccatttggtgttggtaggagaatctgtcccggatataatttagctttgcttcact |
2351374 |
T |
|
| Q |
332 |
tggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggtggccatgtcgatttgtcggaaaaatttgaattcaccgtgatgat |
431 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| |||||||| ||| |||| |
|
|
| T |
2351375 |
tggaatattttgtggctaatttggtttggaatttcgattggaaggttccagaaggtgggcatgttgatttgtcggaaaaacaagaattcactgtggtgat |
2351474 |
T |
|
| Q |
432 |
g |
432 |
Q |
| |
|
| |
|
|
| T |
2351475 |
g |
2351475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 182; Significance: 3e-98; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 34 - 426
Target Start/End: Original strand, 41127083 - 41127478
Alignment:
| Q |
34 |
aagtgtgtggttttggaagggttaaggcgtcatccaccagggcattttgtgttgcctcatgcaatgagcgatgatgtggttttgaatggttatttggtgc |
133 |
Q |
| |
|
||||||||| ||||||||||| | ||| |||| ||||| ||||| ||||||||||| ||||| ||| || ||||||||||| | ||||| ||| ||| |
|
|
| T |
41127083 |
aagtgtgtgattttggaagggctgaggtgtcacccaccggggcactttgtgttgccccatgcggtgaaggaggatgtggttttcgacggttacttgctgc |
41127182 |
T |
|
| Q |
134 |
ctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgtttgggaggatccaatggagtttaagccagaaaggtttttgaagga |
233 |
Q |
| |
|
||||||||| | |||||||||||||||||||| || ||| ||| ||| |||||||||| |||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
41127183 |
ctaaaaatgtggtagtgaatttcatggtggcagacatagggagggaccctagtgtttgggaagatccattggagtttaaaccagaaaggtttttgaagga |
41127282 |
T |
|
| Q |
234 |
tgagacttttgatattacagggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaatttagctttgctccatttg |
333 |
Q |
| |
|
|||| ||||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
41127283 |
tgaggcttttgatattaccgggactaaagagataaagatgatgccgtttggagttgggaggagaatttgtcctggatataatttagctttgctccatttg |
41127382 |
T |
|
| Q |
334 |
gaatattttgtggctaatttggtttggaatttcgattggaaggttccagaggg---tggccatgtcgatttgtcggaaaaatttgaattcaccgtg |
426 |
Q |
| |
|
||||| ||||||||||||||||| |||||||| |||||||| ||| |||||| ||| |||| ||||||||||||||| ||||||||||||| |
|
|
| T |
41127383 |
gaatactttgtggctaatttggtctggaattttaattggaagattctagagggagctggttatgttgatttgtcggaaaaaactgaattcaccgtg |
41127478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 91 - 225
Target Start/End: Original strand, 26506749 - 26506883
Alignment:
| Q |
91 |
catgcaatgagcgatgatgtggttttgaatggttatttggtgcctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgttt |
190 |
Q |
| |
|
|||||| ||| ||| |||||| |||| || ||||| |||||||||||||||||||| || ||||| |||||||||||| | |||| |||||| |||||| |
|
|
| T |
26506749 |
catgcagtgaccgaggatgtgatttttaacggttacttggtgcctaaaaatgggacagttaattttatggtggcagaggttgggtgggatccaagtgttt |
26506848 |
T |
|
| Q |
191 |
gggaggatccaatggagtttaagccagaaaggttt |
225 |
Q |
| |
|
|||||||||| |||| || |||||||| |||||| |
|
|
| T |
26506849 |
gggaggatcccatggcattcaagccagataggttt |
26506883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 26494725 - 26494838
Alignment:
| Q |
112 |
gttttgaatggttatttggtgcctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgtttgggaggatccaatggagttta |
211 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| || || || ||||| |||||||||||||| | || ||||| |
|
|
| T |
26494725 |
gttttgaatggttacttggtgcctaaaaatgggactgtgaattttatggtggcagatataggattagatccaacggtttgggaggatcctacggtgttta |
26494824 |
T |
|
| Q |
212 |
agccagaaaggttt |
225 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
26494825 |
agccagagaggttt |
26494838 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 26494893 - 26495009
Alignment:
| Q |
259 |
aaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaatttagctttgctccatttggaatattttgtggctaatttggttt |
358 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||| |||||||| | ||| || || |||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
26494893 |
aaagagataaagatgatgccgtttggagcagggaggaggatttgtcctgcctataaattggcaatgctccatttagaatactttgttgctaatttggttt |
26494992 |
T |
|
| Q |
359 |
ggaatttcgattggaag |
375 |
Q |
| |
|
||| || || |||||| |
|
|
| T |
26494993 |
tgaactttgagtggaag |
26495009 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 26506923 - 26506966
Alignment:
| Q |
262 |
gagataaagatgatgccgtttggagctggaaggagaatttgtcc |
305 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| |||||||| |
|
|
| T |
26506923 |
gagataaagatgatgccatttggagcaggaaggaggatttgtcc |
26506966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 55017070 - 55017133
Alignment:
| Q |
242 |
ttgatattacagggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcc |
305 |
Q |
| |
|
||||||||||||| | ||||||||| ||||||||||||||||| ||||| ||||| |||||||| |
|
|
| T |
55017070 |
ttgatattacaggaactaaagagatgaagatgatgccgtttggtgctgggaggaggatttgtcc |
55017133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 374
Target Start/End: Complemental strand, 15176408 - 15176287
Alignment:
| Q |
253 |
gggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaatttagctttgctccatttggaatattttgtggctaatt |
352 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| || |||||||| ||||| || | |||||| ||| | || |||||||| ||||| || |||| |
|
|
| T |
15176408 |
gggagtaaagagataaagatgatgccatttggagcagggaggagaatgtgtcctggctatggtttagcattgttgcacttggaatactttgttgccaatt |
15176309 |
T |
|
| Q |
353 |
tggtttggaatttcgattggaa |
374 |
Q |
| |
|
| |||| |||||| || ||||| |
|
|
| T |
15176308 |
ttgttttgaattttgagtggaa |
15176287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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