View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0791_high_42 (Length: 348)
Name: NF0791_high_42
Description: NF0791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0791_high_42 |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 34143543 - 34143789
Alignment:
| Q |
2 |
ccatgatttgtaacttggaagaaaccccattccttgcaagcacttgatatctctttgactaaggcttgtatggcagaggagtcttgaactgtgttgtgga |
101 |
Q |
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| T |
34143543 |
ccatgatttgtaacttggaagaaaccccattccttgcaagcacttgatatctctttgactaaggcttgtatggcagaggagtcttgaactgtgttgtgga |
34143642 |
T |
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| Q |
102 |
ttattggggagaggttgattacgggaatgccttcagcttgggtgatggagagttttggtctgttttatgggttttgaatgaaagcttgatccacctcttc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
34143643 |
ttattggggagaggttgattacgggaatgccttcagcttgggtgatggagagttttggtctgttttctgggttttgaatgaaagcttgatccacctcttc |
34143742 |
T |
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| Q |
202 |
catgtttcctgctaccactaaactaataattcaaacattgattacta |
248 |
Q |
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| T |
34143743 |
catgtttcctgctaccactaaactaataattcaaacattgattacta |
34143789 |
T |
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