View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0791_high_48 (Length: 327)
Name: NF0791_high_48
Description: NF0791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0791_high_48 |
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Alignment Details
Target: chr2 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 29 - 312
Target Start/End: Original strand, 3087738 - 3088021
Alignment:
| Q |
29 |
accaaacatatacatagctaatgtatcaaatgattgtcaagctggttatgaataagtataagggctaattcaaataactgttattcttgaagggtattat |
128 |
Q |
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| T |
3087738 |
accaaacatatacatagctaatgtatcaaatgattgtcatgctggttatgaataagtataagggctaattcaaataactgttattcttgaagggtattat |
3087837 |
T |
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| Q |
129 |
tggaatcataattatgataaagtaattgatgatttctatatgattgataggcacttttaaagcctgaggcatcagaagcagttcatcatttgttacctcc |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3087838 |
tggaatcataattatgataaagtaattgatgatttctatatgattgataggcacttttaaagcctgaggcatcagaagcagttcatcatttgttacctcc |
3087937 |
T |
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| Q |
229 |
ccatgtcaatggtaacttatcagccttatgtgtatggcctgatcaaattaggcactggtacaaatatagatggacaagtccact |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3087938 |
ccatgtcaatggtaacttatcagccttatgtgtatggcctgatcaaattaggcactggtacaaatatagatggacaagtccact |
3088021 |
T |
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