View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0791_high_5 (Length: 641)

Name: NF0791_high_5
Description: NF0791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0791_high_5
NF0791_high_5
[»] chr1 (55 HSPs)
chr1 (71-641)||(41129841-41130408)
chr1 (232-402)||(37329323-37329493)
chr1 (229-402)||(48819301-48819474)
chr1 (229-402)||(4068117-4068290)
chr1 (237-402)||(26988158-26988323)
chr1 (232-412)||(15515248-15515428)
chr1 (232-402)||(37712073-37712242)
chr1 (229-402)||(28690004-28690179)
chr1 (246-402)||(41196621-41196777)
chr1 (229-358)||(3069809-3069938)
chr1 (229-381)||(1005342-1005494)
chr1 (229-355)||(6337714-6337840)
chr1 (236-391)||(16888891-16889042)
chr1 (299-402)||(47413444-47413547)
chr1 (231-408)||(10082254-10082432)
chr1 (231-402)||(35897530-35897705)
chr1 (230-402)||(26946015-26946188)
chr1 (232-383)||(46689480-46689631)
chr1 (234-402)||(13038954-13039122)
chr1 (298-402)||(28870274-28870378)
chr1 (231-402)||(35590134-35590306)
chr1 (326-402)||(37431233-37431309)
chr1 (229-383)||(9572714-9572869)
chr1 (229-380)||(36422914-36423065)
chr1 (291-412)||(39658224-39658345)
chr1 (229-402)||(45267467-45267637)
chr1 (259-402)||(23544823-23544965)
chr1 (299-402)||(46500911-46501015)
chr1 (232-403)||(10365176-10365346)
chr1 (299-402)||(10849977-10850080)
chr1 (229-393)||(28122618-28122783)
chr1 (229-383)||(3115992-3116145)
chr1 (229-383)||(32497202-32497355)
chr1 (229-358)||(35282549-35282678)
chr1 (338-402)||(1565286-1565349)
chr1 (303-396)||(391251-391345)
chr1 (335-402)||(994623-994692)
chr1 (229-383)||(17628355-17628508)
chr1 (229-383)||(22593337-22593491)
chr1 (299-356)||(12871432-12871489)
chr1 (229-402)||(26435086-26435258)
chr1 (229-317)||(18327526-18327614)
chr1 (299-379)||(31249754-31249834)
chr1 (334-402)||(42367057-42367125)
chr1 (299-403)||(50919559-50919663)
chr1 (291-381)||(16225572-16225661)
chr1 (229-358)||(25485750-25485879)
chr1 (291-368)||(29333481-29333558)
chr1 (340-401)||(35590099-35590160)
chr1 (334-402)||(1265623-1265691)
chr1 (233-269)||(8410155-8410191)
chr1 (326-402)||(14868484-14868560)
chr1 (299-383)||(19395846-19395930)
chr1 (299-383)||(42591454-42591538)
chr1 (229-269)||(51409751-51409791)
[»] chr4 (62 HSPs)
chr4 (229-402)||(48591335-48591508)
chr4 (247-402)||(17222849-17223004)
chr4 (229-402)||(7148774-7148946)
chr4 (230-402)||(28074368-28074539)
chr4 (229-409)||(36740906-36741086)
chr4 (229-402)||(12495555-12495730)
chr4 (229-391)||(23297440-23297599)
chr4 (229-402)||(23335644-23335817)
chr4 (229-402)||(38345734-38345905)
chr4 (262-401)||(36254948-36255087)
chr4 (232-402)||(29877644-29877816)
chr4 (231-402)||(42611779-42611950)
chr4 (6-58)||(42796780-42796832)
chr4 (229-412)||(896972-897155)
chr4 (229-383)||(41228905-41229059)
chr4 (229-402)||(488295-488468)
chr4 (299-402)||(34526248-34526351)
chr4 (299-402)||(48687006-48687108)
chr4 (232-358)||(18424233-18424358)
chr4 (231-402)||(27368062-27368234)
chr4 (234-401)||(18258018-18258178)
chr4 (291-401)||(18630807-18630917)
chr4 (231-382)||(46704201-46704351)
chr4 (327-402)||(48667770-48667845)
chr4 (304-402)||(42153073-42153171)
chr4 (340-402)||(43699539-43699601)
chr4 (229-358)||(825684-825813)
chr4 (229-402)||(948074-948250)
chr4 (326-402)||(3564305-3564381)
chr4 (299-358)||(9319120-9319179)
chr4 (291-358)||(34633455-34633521)
chr4 (229-392)||(47202828-47202989)
chr4 (291-402)||(48721884-48721995)
chr4 (282-392)||(2330394-2330504)
chr4 (340-402)||(23297406-23297468)
chr4 (260-402)||(28663606-28663747)
chr4 (234-379)||(31022409-31022552)
chr4 (250-402)||(32628801-32628953)
chr4 (335-395)||(35405791-35405851)
chr4 (298-402)||(41071421-41071525)
chr4 (229-317)||(52274116-52274204)
chr4 (231-317)||(1374358-1374445)
chr4 (291-358)||(11256616-11256683)
chr4 (340-402)||(29877607-29877669)
chr4 (231-392)||(52700465-52700626)
chr4 (294-358)||(2702670-2702734)
chr4 (334-402)||(4331437-4331505)
chr4 (291-402)||(22273844-22273956)
chr4 (231-320)||(43699474-43699565)
chr4 (232-392)||(43739997-43740156)
chr4 (301-392)||(11298656-11298746)
chr4 (343-402)||(22273761-22273820)
chr4 (339-402)||(34633367-34633430)
chr4 (229-312)||(35124389-35124472)
chr4 (231-309)||(212952-213029)
chr4 (308-382)||(8130560-8130634)
chr4 (229-383)||(42617160-42617313)
chr4 (341-402)||(1374420-1374481)
chr4 (345-402)||(42611929-42611986)
chr4 (307-400)||(43699362-43699455)
chr4 (291-383)||(11679057-11679149)
chr4 (291-383)||(11687336-11687428)
[»] chr3 (35 HSPs)
chr3 (229-402)||(40240489-40240661)
chr3 (229-402)||(43079845-43080018)
chr3 (232-402)||(585025-585194)
chr3 (231-402)||(40580987-40581159)
chr3 (231-402)||(53217952-53218122)
chr3 (291-402)||(20685849-20685960)
chr3 (234-369)||(42956123-42956258)
chr3 (237-402)||(3845865-3846030)
chr3 (229-350)||(3870189-3870310)
chr3 (259-402)||(48597777-48597921)
chr3 (229-402)||(22809104-22809278)
chr3 (303-398)||(30321645-30321739)
chr3 (250-381)||(34707645-34707776)
chr3 (299-393)||(37243538-37243631)
chr3 (229-402)||(51409395-51409567)
chr3 (291-383)||(4974375-4974467)
chr3 (334-402)||(35480313-35480380)
chr3 (334-402)||(46573365-46573433)
chr3 (291-391)||(52895327-52895427)
chr3 (299-392)||(17752053-17752145)
chr3 (299-392)||(19053373-19053465)
chr3 (291-379)||(20174874-20174962)
chr3 (295-383)||(33946480-33946568)
chr3 (327-402)||(53261678-53261754)
chr3 (229-392)||(3876185-3876347)
chr3 (229-316)||(52421138-52421225)
chr3 (340-402)||(29270329-29270391)
chr3 (239-317)||(29270373-29270451)
chr3 (329-383)||(38524190-38524244)
chr3 (292-358)||(48816780-48816846)
chr3 (329-402)||(7292779-7292852)
chr3 (232-269)||(30199000-30199037)
chr3 (229-317)||(52021248-52021337)
chr3 (232-272)||(5129856-5129896)
chr3 (291-383)||(32901078-32901170)
[»] chr5 (65 HSPs)
chr5 (229-402)||(28625482-28625654)
chr5 (229-402)||(40697003-40697181)
chr5 (229-402)||(41059700-41059873)
chr5 (232-398)||(29922104-29922270)
chr5 (232-403)||(12467269-12467444)
chr5 (229-402)||(40452388-40452562)
chr5 (229-402)||(1868848-1869016)
chr5 (231-358)||(13060557-13060684)
chr5 (229-402)||(1576633-1576806)
chr5 (229-402)||(1608009-1608182)
chr5 (304-402)||(11163193-11163291)
chr5 (233-413)||(11912002-11912182)
chr5 (229-356)||(42852024-42852150)
chr5 (229-402)||(24030217-24030390)
chr5 (229-402)||(35536844-35537019)
chr5 (299-400)||(1943067-1943168)
chr5 (231-358)||(17657246-17657373)
chr5 (229-402)||(2878587-2878760)
chr5 (298-399)||(5559833-5559934)
chr5 (334-402)||(13739336-13739404)
chr5 (232-358)||(41419509-41419632)
chr5 (232-323)||(41534628-41534719)
chr5 (306-402)||(10537137-10537234)
chr5 (229-377)||(13625456-13625605)
chr5 (299-402)||(39154672-39154775)
chr5 (327-402)||(41125774-41125849)
chr5 (231-316)||(1473360-1473445)
chr5 (229-402)||(22201842-22202020)
chr5 (293-358)||(29136781-29136846)
chr5 (337-402)||(42558628-42558693)
chr5 (231-358)||(12986966-12987096)
chr5 (326-402)||(17868115-17868191)
chr5 (299-402)||(29659132-29659235)
chr5 (291-402)||(6150856-6150966)
chr5 (327-402)||(35083339-35083414)
chr5 (292-358)||(7364264-7364330)
chr5 (261-393)||(2577348-2577481)
chr5 (229-402)||(6144740-6144912)
chr5 (291-368)||(42478890-42478967)
chr5 (334-402)||(6125393-6125461)
chr5 (231-343)||(7984109-7984221)
chr5 (299-402)||(22573710-22573814)
chr5 (299-402)||(26003069-26003172)
chr5 (299-402)||(27805987-27806091)
chr5 (334-402)||(33924693-33924761)
chr5 (291-402)||(40152787-40152898)
chr5 (340-403)||(1473323-1473386)
chr5 (327-402)||(3520418-3520493)
chr5 (299-358)||(28357213-28357272)
chr5 (229-317)||(42706798-42706888)
chr5 (340-399)||(42851993-42852052)
chr5 (299-358)||(43268591-43268650)
chr5 (291-391)||(589216-589317)
chr5 (230-402)||(29418663-29418835)
chr5 (341-402)||(41125672-41125733)
chr5 (231-356)||(43319007-43319132)
chr5 (340-403)||(342255-342319)
chr5 (335-383)||(1371926-1371973)
chr5 (340-412)||(12987070-12987142)
chr5 (340-412)||(13060658-13060730)
chr5 (299-383)||(20458488-20458572)
chr5 (335-402)||(29657966-29658033)
chr5 (229-269)||(33757090-33757130)
chr5 (291-359)||(38498632-38498700)
chr5 (291-402)||(43265842-43265954)
[»] chr2 (39 HSPs)
chr2 (246-412)||(36501416-36501582)
chr2 (230-395)||(4026929-4027093)
chr2 (229-402)||(25836624-25836796)
chr2 (235-402)||(33321223-33321390)
chr2 (229-402)||(887414-887587)
chr2 (231-383)||(21788461-21788613)
chr2 (304-402)||(8832534-8832632)
chr2 (229-398)||(38216025-38216190)
chr2 (327-402)||(5903638-5903713)
chr2 (325-402)||(37420004-37420081)
chr2 (231-402)||(4004823-4004994)
chr2 (291-402)||(4533386-4533497)
chr2 (232-402)||(13056238-13056408)
chr2 (291-358)||(7480854-7480921)
chr2 (231-402)||(29774749-29774920)
chr2 (229-356)||(42839278-42839404)
chr2 (277-402)||(24007843-24007966)
chr2 (341-402)||(5903729-5903790)
chr2 (291-402)||(37409707-37409818)
chr2 (229-380)||(38471724-38471875)
chr2 (291-398)||(45163800-45163907)
chr2 (340-410)||(38471847-38471917)
chr2 (334-415)||(755609-755690)
chr2 (229-402)||(12238397-12238567)
chr2 (232-316)||(43787800-43787884)
chr2 (306-358)||(44475474-44475526)
chr2 (299-386)||(19683644-19683731)
chr2 (232-367)||(29133613-29133748)
chr2 (291-358)||(35235169-35235236)
chr2 (229-383)||(11776986-11777140)
chr2 (329-402)||(12442904-12442977)
chr2 (291-400)||(17546488-17546597)
chr2 (291-401)||(38010582-38010694)
chr2 (299-383)||(446499-446583)
chr2 (232-272)||(12683647-12683687)
chr2 (291-383)||(12950045-12950137)
chr2 (299-383)||(22898287-22898371)
chr2 (229-269)||(34913434-34913474)
chr2 (229-269)||(40301354-40301394)
[»] chr8 (40 HSPs)
chr8 (229-398)||(32975689-32975858)
chr8 (229-402)||(34286475-34286647)
chr8 (229-390)||(32131442-32131603)
chr8 (229-402)||(28879060-28879230)
chr8 (232-402)||(10298838-10299007)
chr8 (291-402)||(10213759-10213870)
chr8 (229-382)||(9131059-9131212)
chr8 (229-383)||(32924141-32924296)
chr8 (291-379)||(25465781-25465869)
chr8 (296-379)||(25333635-25333718)
chr8 (232-402)||(24350430-24350600)
chr8 (235-402)||(16972267-16972435)
chr8 (303-402)||(32212926-32213025)
chr8 (229-383)||(2669650-2669804)
chr8 (291-392)||(8752870-8752972)
chr8 (232-393)||(11988202-11988361)
chr8 (292-358)||(9130972-9131038)
chr8 (297-402)||(25671802-25671904)
chr8 (299-393)||(35055494-35055586)
chr8 (229-383)||(38895661-38895815)
chr8 (337-402)||(13131553-13131618)
chr8 (229-398)||(35453412-35453579)
chr8 (229-358)||(42363272-42363400)
chr8 (229-393)||(42102109-42102271)
chr8 (229-272)||(32213063-32213106)
chr8 (250-317)||(35168437-35168504)
chr8 (229-383)||(41145326-41145482)
chr8 (291-381)||(30974053-30974143)
chr8 (361-402)||(10480029-10480070)
chr8 (305-402)||(24087249-24087346)
chr8 (291-332)||(25333713-25333754)
chr8 (341-402)||(32131408-32131469)
chr8 (294-383)||(45548076-45548164)
chr8 (232-272)||(1089018-1089058)
chr8 (291-383)||(2563422-2563514)
chr8 (232-272)||(13265489-13265529)
chr8 (291-383)||(19925621-19925713)
chr8 (291-402)||(24866862-24866973)
chr8 (335-383)||(29713285-29713333)
chr8 (299-355)||(34338341-34338397)
[»] chr6 (38 HSPs)
chr6 (231-383)||(32675819-32675971)
chr6 (230-402)||(7267778-7267957)
chr6 (291-402)||(9202310-9202421)
chr6 (229-381)||(21891270-21891422)
chr6 (229-388)||(2034154-2034313)
chr6 (229-398)||(10687309-10687480)
chr6 (229-358)||(10873988-10874115)
chr6 (229-403)||(10755193-10755364)
chr6 (298-402)||(35071339-35071443)
chr6 (229-402)||(8014790-8014963)
chr6 (231-383)||(23239251-23239403)
chr6 (231-412)||(2255738-2255920)
chr6 (293-399)||(7446777-7446882)
chr6 (229-401)||(2027089-2027260)
chr6 (300-383)||(6752885-6752968)
chr6 (299-402)||(9764302-9764405)
chr6 (231-396)||(1240527-1240693)
chr6 (252-402)||(6958649-6958798)
chr6 (300-402)||(9201632-9201734)
chr6 (335-401)||(20776462-20776528)
chr6 (328-402)||(24625976-24626050)
chr6 (229-382)||(6776810-6776963)
chr6 (334-402)||(12816812-12816880)
chr6 (299-402)||(7576772-7576875)
chr6 (229-358)||(10054383-10054510)
chr6 (229-383)||(10184260-10184413)
chr6 (229-383)||(32615345-32615498)
chr6 (231-402)||(6758631-6758803)
chr6 (291-383)||(2040111-2040203)
chr6 (291-402)||(29623389-29623499)
chr6 (335-402)||(21025130-21025197)
chr6 (334-404)||(10658296-10658366)
chr6 (291-371)||(3210931-3211018)
chr6 (342-383)||(23239234-23239275)
chr6 (311-371)||(12817050-12817110)
chr6 (229-313)||(21025227-21025311)
chr6 (229-269)||(30533982-30534022)
chr6 (299-383)||(32165191-32165275)
[»] chr7 (38 HSPs)
chr7 (229-402)||(29378647-29378820)
chr7 (232-402)||(20888578-20888749)
chr7 (298-412)||(33287976-33288090)
chr7 (231-402)||(29390462-29390632)
chr7 (229-383)||(44613403-44613557)
chr7 (229-402)||(47511045-47511220)
chr7 (231-358)||(30181554-30181681)
chr7 (231-402)||(34922935-34923108)
chr7 (229-402)||(38372560-38372733)
chr7 (235-393)||(14691219-14691378)
chr7 (299-402)||(25908366-25908469)
chr7 (327-402)||(33204934-33205009)
chr7 (259-403)||(39279461-39279606)
chr7 (231-402)||(22032766-22032937)
chr7 (234-391)||(32917514-32917671)
chr7 (229-358)||(46743952-46744084)
chr7 (338-401)||(6406779-6406842)
chr7 (291-385)||(37465814-37465908)
chr7 (232-317)||(41094223-41094306)
chr7 (232-356)||(48021605-48021728)
chr7 (296-402)||(18765022-18765129)
chr7 (299-402)||(40629344-40629446)
chr7 (326-392)||(44834904-44834970)
chr7 (231-387)||(14675886-14676041)
chr7 (231-383)||(16932860-16933011)
chr7 (231-383)||(16938243-16938394)
chr7 (260-356)||(17944686-17944782)
chr7 (334-402)||(26331872-26331940)
chr7 (299-383)||(47654344-47654428)
chr7 (299-382)||(23137094-23137177)
chr7 (308-383)||(43818808-43818883)
chr7 (231-393)||(991504-991664)
chr7 (327-393)||(1401173-1401239)
chr7 (231-269)||(21249160-21249198)
chr7 (344-397)||(18837349-18837402)
chr7 (299-383)||(16958887-16958971)
chr7 (362-402)||(23119851-23119891)
chr7 (309-392)||(32848612-32848696)
[»] scaffold0157 (1 HSPs)
scaffold0157 (229-402)||(24747-24922)
[»] scaffold1367 (1 HSPs)
scaffold1367 (231-402)||(1062-1233)
[»] scaffold0041 (1 HSPs)
scaffold0041 (232-317)||(108990-109073)
[»] scaffold0048 (1 HSPs)
scaffold0048 (299-402)||(58779-58882)
[»] scaffold0299 (1 HSPs)
scaffold0299 (231-402)||(11212-11382)
[»] scaffold0022 (1 HSPs)
scaffold0022 (229-272)||(89294-89337)
[»] scaffold0015 (1 HSPs)
scaffold0015 (327-398)||(48543-48614)
[»] scaffold0512 (1 HSPs)
scaffold0512 (307-383)||(4144-4220)
[»] scaffold0057 (1 HSPs)
scaffold0057 (233-285)||(43844-43896)
[»] scaffold0024 (1 HSPs)
scaffold0024 (229-343)||(97179-97290)


Alignment Details
Target: chr1 (Bit Score: 460; Significance: 0; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 71 - 641
Target Start/End: Original strand, 41129841 - 41130408
Alignment:
Q  71 tatggagatgtgtgcttaaaaaatattgtaatcatatattggtttaaataaatttcctactttgtgtacttattattgttgtttaactttttcttagttt 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  41129841 tatggagatgtgtgcttaaaaaatattgtaatcatatattggtttaaataaatttcctactttgtgtacttatt---gttgtttaactttttcttagttt 41129937  T
Q  171 cattgccaatactatttagaatttcattacgtagtttcttggatcgacgtannnnnnnagcttatgcaaataaaaaagtttttatgttttattcataagc 270  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||       |||||||| |||||||||||||||||||| ||||||||||||    
T  41129938 cattgccaatattatttagaatttcattatgtagtttcttggattgacgtatttttttagcttatgtaaataaaaaagtttttatgtattattcataagc 41130037  T
Q  271 ttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttat 370  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41130038 ttctctaggtggtttatgtcaaaacaacttatgaagatacaattttcattagtgcaaacttaagaattaacataaaatcttatttattagaataagttat 41130137  T
Q  371 tcttcataagctcgaaaataagccaatccaaaaaagcccttagtctatggagtttagattattagattttatttgagtgctcatttaaaatgtaatttta 470  Q
    | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41130138 ttttcataagctcgaaaataagccaatccaaaaaagcccttattctacggagtttagattattagattttatttgagtgctcatttaaaatgtaatttta 41130237  T
Q  471 cttgttaagctgctgatcattgatcaaacaaacattataatacatgaaatgggnnnnnnnnaaccagcattgtaagttcaaaggccactactagaaattt 570  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||||||||||||||| ||||||||||||||||||||||    
T  41130238 cttgttaagctgctgatcattggtcaaacaaacattataatacatgaaatgggttttttttaaccagcattgtaagtccaaaggccactactagaaattt 41130337  T
Q  571 gctctttacccgtggattttcttgcgaaaataaatctgaaggaattcctgttttcactgcaaagaaattcc 641  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41130338 gctctttacccgtggattttcttgcgaaaataaatctgaaggaattcctgttttcactgcaaagaaattcc 41130408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 232 - 402
Target Start/End: Complemental strand, 37329493 - 37329323
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    |||||||||||||  || |||||||| |||||||||| ||| || |||| |||| ||  |||||| |||||||||||||||||||| ||||||  |||||    
T  37329493 ttatgcaaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaactt 37329394  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |  |||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||| | |||||||    
T  37329393 ataaattaacataaaagcttatttatttgcataagttatttttcataagctcaaaaataagtcgatccaaa 37329323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 48819301 - 48819474
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    ||||||||||||||||  || ||| |||| |||||||||||||| || |||| |||| ||  |||||| |||||||||||||| ||||  || |||  ||    
T  48819301 agcttatgcaaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaa 48819400  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| ||||||||||||||||||||||||| | ||||| |||| ||||||||||  ||||||||||||||||||    
T  48819401 cttatgaattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagccaatccaaa 48819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 4068117 - 4068290
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    ||||| |||||||||| ||| |||||||| |||||||||||||| || |||| |||| ||  |||||||||||||||||||| |||||| || |||  ||    
T  4068117 agcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactattttcgttagtgagaa 4068216  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| ||||||| ||||||| ||||||||| | ||||| || | ||||||| ||  ||||||||||||||||||    
T  4068217 cttatgaattaatataaaagtttatttatttgcataagctacttttcataaactaaaaaataagccaatccaaa 4068290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 237 - 402
Target Start/End: Original strand, 26988158 - 26988323
Alignment:
Q  237 caaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaa 336  Q
    |||||||| ||| |||||||| |||||||||||||| || |||| |||| ||  |||||| ||||||||||||||||| || || ||  ||||||| |||    
T  26988158 caaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgttagtaaaaacttatgaa 26988257  T
Q  337 ttaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||| ||||||| | ||||  |||| ||||||||||| |||||||| |||||||||    
T  26988258 ttaacataaaagctaatttatttgcataaactatttttcataagctcaaaaataagtcaatccaaa 26988323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 232 - 412
Target Start/End: Complemental strand, 15515428 - 15515248
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    |||||| |||||| ||| |||||||| |||||||||||||| || |||| |||| ||  |||| | |||||||||||||||||||| || |||  |||||    
T  15515428 ttatgctaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaactt 15515329  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaaaagccctta 412  Q
    | |||||||||| ||||||||||||||    |||| |||| |||||||||||  ||||||||||||||||| | |||||||    
T  15515328 atgaattaacatgaaagcttatttatttacttaagctatttttcataagctcataaataagccaatccaaacaggccctta 15515248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 232 - 402
Target Start/End: Original strand, 37712073 - 37712242
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    |||||||||| || ||| |||||||| | |||||||||||| || |||| |||| ||  |||||||||||||||||||||| |||| || ||   |||||    
T  37712073 ttatgcaaatgaataagcttttatgtat-attcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatacaactttcgttagtaagaactt 37712171  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | ||||||||||||||| ||||||||| | ||||| |||| ||| ||||||| |||||||| |||||||||    
T  37712172 atgaattaacataaaagtttatttatttgcataagctatttttcgtaagctcaaaaataagtcaatccaaa 37712242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 28690004 - 28690179
Alignment:
Q  229 agcttatgcaaataaaaa--agtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgca 326  Q
    |||||||||||||||| |  || |||||||| ||||||||||| || || |||| |||| ||   ||||| ||||||||||||||||||| ||| |||      
T  28690004 agcttatgcaaataaatataaggttttatgtattattcataagtttgtcaaggtagtttatgaacaaacagcttatgaagatacaatttttattagtgag 28690103  T
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    || ||  ||||||||||||||||||||||||| | ||||| |||| ||||||||||| |||| ||| |||||||||    
T  28690104 aaattctgaattaacataaaagcttatttatttgcataagctatttttcataagctcaaaaacaagtcaatccaaa 28690179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 246 - 402
Target Start/End: Complemental strand, 41196777 - 41196621
Alignment:
Q  246 aagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataa 345  Q
    |||||||||||| |||||||||||||| || | || |||| ||  |||||| |||||||||||||||||||  || |||  | |||  ||||||||||||    
T  41196777 aagtttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaacataa 41196678  T
Q  346 aagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | ||||||||||| | ||||| |||| | ||||||||| ||||||||||||||||||    
T  41196677 aggcttatttatttgcataagctattttacataagctcaaaaataagccaatccaaa 41196621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 3069938 - 3069809
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    ||||||| |||||||  ||| ||| |||| |||||||||||||| || |||| |||| ||  |||||| ||||||||||||||||||||| | |||  ||    
T  3069938 agcttatacaaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaa 3069839  T
Q  329 cttaagaattaacataaaagcttatttatt 358  Q
    |||| |||||||||||||||||||||||||    
T  3069838 cttatgaattaacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 381
Target Start/End: Original strand, 1005342 - 1005494
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| ||||| || |||||||||||||| ||||||| |||  ||  ||||| ||||||||||||||||||||   | |||  ||    
T  1005342 agcttatgcaaataaataagcttttacgtattattcataagcttgtctaggtagttaatgaaaaaactacttatgaagatacaatttttgatagtgagaa 1005441  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagc 381  Q
    |||| |||||||||| |||||| ||||||| || |||| |||| |||||||||    
T  1005442 cttatgaattaacatcaaagctcatttatttgagtaagctatttttcataagc 1005494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 6337840 - 6337714
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||| ||||||| ||| |||||||| |||||||||||||| || |||| |||| ||  |||||| |||||||||||||||||||  || | |  ||    
T  6337840 agcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaa 6337741  T
Q  329 cttaagaattaacataaaagcttattt 355  Q
    |||| ||||||||||||||||||||||    
T  6337740 cttatgaattaacataaaagcttattt 6337714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 391
Target Start/End: Complemental strand, 16889042 - 16888891
Alignment:
Q  236 gcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaaga 335  Q
    ||||||||| ||| |||||||| |||||||||||||| |  |||| |||| ||  |||||| ||||||||||||||||||||||| |||  || ||| ||    
T  16889042 gcaaataaataagcttttatgtattattcataagcttgta-aggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaatttatga 16888944  T
Q  336 attaacataaaagcttatttattagaataagttattcttcataagctcgaaaataa 391  Q
     |||||||||||||||||||||| | ||||   ||| ||||||||||| |||||||    
T  16888943 cttaacataaaagcttatttatttgcataa---atttttcataagctcaaaaataa 16888891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 299 - 402
Target Start/End: Original strand, 47413444 - 47413547
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    ||||||||||| |||||   |||||| ||| |||  |||||||||||||||||||||||| | ||||| |||| ||||||||||| ||||||||||||||    
T  47413444 ttatgaagatataatttgtgttggtgaaaaattataaattaacataaaagcttatttatttgcataagctatttttcataagctcaaaaataagccaatc 47413543  T
Q  399 caaa 402  Q
    ||||    
T  47413544 caaa 47413547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 231 - 408
Target Start/End: Original strand, 10082254 - 10082432
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaa-caacttatgaagatacaattttcattggtgcaaac 329  Q
    |||||||||||||| |||||||||||| ||||| ||||| || || |||| |||| ||  |||| ||||||||||| ||||| ||||  || |||  |||    
T  10082254 cttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaaaaacaacttatgaaaatacatttttggttcgtgagaac 10082353  T
Q  330 ttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaaaagcc 408  Q
    ||| ||||||| ||||||||||||||||| |  |||  |||| ||||||||||| |||||||  ||| ||||| |||||    
T  10082354 ttatgaattaatataaaagcttatttatttgtgtaatgtattgttcataagctcaaaaataactcaacccaaacaagcc 10082432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 231 - 402
Target Start/End: Complemental strand, 35897705 - 35897530
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtc----aaaacaacttatgaagatacaattttcattggtgca 326  Q
    |||||||||||||| |||||||||| | |||||||||||||| || | || |||| ||      |||| ||||||| | ||||||||||||||| ||| |    
T  35897705 cttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaaggaaaaaaaaacttataacgatacaattttcattagtgaa 35897606  T
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    || |||  |||||||||||||| |||||||||   ||||| |||| |||||||| || |||||||| |||||||||    
T  35897605 aatttataaattaacataaaagtttatttatttacataagctatttttcataagttcaaaaataagtcaatccaaa 35897530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 230 - 402
Target Start/End: Complemental strand, 26946188 - 26946015
Alignment:
Q  230 gcttatgcaaataaaaaag-tttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    ||||||| ||||||| ||| ||||||||| |||||||||||||| |  |||| |||| ||  ||||||||||||||||||||||||||| || |||  ||    
T  26946188 gcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatacaattttccttagtgacaa 26946089  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||  ||||||  | |||||||| ||||||   ||||| |  | ||||||||||| |||||||| |||||||||    
T  26946088 cttgtgaattagtacaaaagcttgtttatttacataagctgattttcataagctcaaaaataagtcaatccaaa 26946015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 232 - 383
Target Start/End: Complemental strand, 46689631 - 46689480
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    ||||||||||||||||| |||||| | |||||||| ||||| |  ||||  ||| |   ||||||||||||||| ||| ||||||| || |||  |||||    
T  46689631 ttatgcaaataaaaaagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaaataaaattttcgttagtgagaactt 46689532  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    | ||||||| |||| || ||||||||| | |||||||||| |||||||||||    
T  46689531 atgaattaatataatagtttatttatttgcataagttatttttcataagctc 46689480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 234 - 402
Target Start/End: Original strand, 13038954 - 13039122
Alignment:
Q  234 atgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaa 333  Q
    ||||||||||| ||| |||||| | |||||||| ||||| |  |||| |||| ||  ||||||||||||||||||| | ||||| || |||  || |||     
T  13038954 atgcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaagttttcgttagtgagaagttat 13039053  T
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc-caatccaaa 402  Q
    ||||||| ||||||| ||||||||| | ||||| |||| |||||||| || ||||||||| |||||||||    
T  13039054 gaattaatataaaagtttatttatttgcataagctatttttcataagttc-aaaataagctcaatccaaa 13039122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 298 - 402
Target Start/End: Original strand, 28870274 - 28870378
Alignment:
Q  298 cttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaat 397  Q
    |||||||| || |||||||| || |||  |||||| |||| |||||||||||||||||||| | | |||||||| ||||||||||  ||| |||||||||    
T  28870274 cttatgaaaatgcaattttctttagtgagaacttatgaatgaacataaaagcttatttatttgcaaaagttatttttcataagctaaaaattaagccaat 28870373  T
Q  398 ccaaa 402  Q
    |||||    
T  28870374 ccaaa 28870378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 231 - 402
Target Start/End: Original strand, 35590134 - 35590306
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||| |||||||| |  ||||||||||| || |||| |||| ||  |||||| |||||||||||||||||||| |  |||  ||||    
T  35590134 cttatgcaaataaataagcttttatgtatagttcataagcttgtcaaggttgtttatgaaaaaacagcttatgaagatacaattttcgtcagtgagaact 35590233  T
Q  331 taagaattaaca-taaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    || ||||||||| ||||| ||| |||||| | ||||| |||| ||  ||||||  |||||||| |||| ||||    
T  35590234 tatgaattaacattaaaaacttttttatttggataagctattttttctaagcttaaaaataagtcaattcaaa 35590306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 326 - 402
Target Start/End: Original strand, 37431233 - 37431309
Alignment:
Q  326 aaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||| ||||||||| ||||||||||||||| | |||||||||| ||||| ||||| |||||||| |||||||||    
T  37431233 aaacttatgaattaacaaaaaagcttatttattcgcataagttatttttcatgagctcaaaaataagtcaatccaaa 37431309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 9572869 - 9572714
Alignment:
Q  229 agcttatgcaaataaaaaag-tttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaa 327  Q
    ||||| |||||||||| ||| ||||||| | ||||||||||| || |  |||| |||| ||  ||||||| ||||||||||| | ||||  || |||  |    
T  9572869 agcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataaagtttttgttagtgaga 9572770  T
Q  328 acttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||| ||||||| ||||||||||||||||| | ||||| |||| |||||||||||    
T  9572769 acttatgaattaatataaaagcttatttatttgcataagctatttttcataagctc 9572714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 229 - 380
Target Start/End: Complemental strand, 36423065 - 36422914
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||| | ||||||||||| || |  |||| |||| ||   |||||||||||||||||| || |||| || |||  ||    
T  36423065 agcttatgcaaataaataagcttttatttattattcataagtttgttaaggtagtttatgaataaacaacttatgaagataaaaatttcgttagtgagaa 36422966  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataag 380  Q
     |||  || ||| ||||||| ||||||||| | |||||||||||||||||||    
T  36422965 gttataaaataatataaaagtttatttatttgcataagttattcttcataag 36422914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 412
Target Start/End: Complemental strand, 39658345 - 39658224
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    |||||| ||||||||| |||||||||| | ||||  || ||| |||||||||||||||||  |||||| | |||||| ||| || ||| |||  ||||||    
T  39658345 aaaacagcttatgaaggtacaattttcgtcggtgggaatttatgaattaacataaaagctactttatttgcataagtaatttttaatatgctaaaaaata 39658246  T
Q  391 agccaatccaaaaaagccctta 412  Q
    |||||||| |||| ||||||||    
T  39658245 agccaatcaaaaagagccctta 39658224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 45267467 - 45267637
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaa-caacttatgaagatacaattttcattggtgcaa 327  Q
    |||||||||||||||| ||| ||||  || ||||| || ||||| || |||| |||| ||  |||| || |||||||||||||||||||| || ||   |    
T  45267467 agcttatgcaaataaataagctttttagtattatttattagcttgtcaaggtagtttatgaaaaaaacagcttatgaagatacaattttcgttagtaaga 45267566  T
Q  328 acttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||| |||| |||||||||||||||||    | ||||| |||| ||||||||||| ||||||| |||| |||||    
T  45267567 acttatgaataaacataaaagcttattt----gcataagctatttttcataagctcaaaaataatccaacccaaa 45267637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 259 - 402
Target Start/End: Original strand, 23544823 - 23544965
Alignment:
Q  259 ttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaatttt-cattggtgcaaacttaagaattaacataaaagcttatttat 357  Q
    |||||||||||||| || |||| |||| ||  |||||| |||||||| ||||| |||| | ||||||  |||||| ||||||||||||||||||||||||    
T  23544823 ttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaaaatacattttttcgttggtgagaactta-gaattaacataaaagcttatttat 23544921  T
Q  358 tagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | | |||||  ||| ||||| ||||| |||||||  |||||||||    
T  23544922 ttgcataagcaatt-ttcatgagctcaaaaataaatcaatccaaa 23544965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 46501015 - 46500911
Alignment:
Q  299 ttatgaagatacaattttca-ttggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaat 397  Q
    |||||||||||||||||||  || ||| |||||||  ||| |||||||||||||||||||| | |||||||||| || ||||| |  |||||||| ||||    
T  46501015 ttatgaagatacaattttccgttagtgaaaacttataaatcaacataaaagcttatttatttgcataagttattttttataagataaaaaataagtcaat 46500916  T
Q  398 ccaaa 402  Q
    |||||    
T  46500915 ccaaa 46500911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 403
Target Start/End: Original strand, 10365176 - 10365346
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    |||||||||| || ||  |||||||| ||||| |||||||| || | || |||| ||  ||||||||  ||||| ||||||||||| || ||  ||||||    
T  10365176 ttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatga-aaaacaaccgatgaatatacaattttcgttagtaaaaactt 10365274  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaa 403  Q
       |||||||||||||||||||| ||| | ||||| |||| ||||||||||  |||||||| |||| |||||    
T  10365275 ttaaattaacataaaagcttattcatttgcataagctatttttcataagcttaaaaataagtcaattcaaaa 10365346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 10850080 - 10849977
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    ||||||| ||||||||||| ||  || |||||||  ||||||||| |||||||||||||| | |||||||||| |||||||| |  |||||||| ||||     
T  10850080 ttatgaaaatacaattttcgttaatgaaaacttataaattaacatgaaagcttatttatttgtataagttatttttcataagttaaaaaataagtcaatt 10849981  T
Q  399 caaa 402  Q
    ||||    
T  10849980 caaa 10849977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 393
Target Start/End: Original strand, 28122618 - 28122783
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggt--gca 326  Q
    ||||||||||||||||  || |||||| | |||||||| |||||||  |||| |||| ||  |||| ||||||| |||||| ||||||| || ||  | |    
T  28122618 agcttatgcaaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattttcgttagtaagaa 28122717  T
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc 393  Q
    |||||  ||||||| |||||||||||||||||   ||||  |||| ||||||||||| |||||||||    
T  28122718 aacttctgaattaatataaaagcttatttattttcataaactatttttcataagctc-aaaataagc 28122783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 3116145 - 3115992
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| || |||||||||||| || ||||| || |  |||| |||| ||  ||||| | ||||||||||||||||||| || ||   |     
T  3116145 agcttatgcaaataaataaatttttatgttttgtttataagttttta-aggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtaagat 3116047  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||  |||||| ||||||||||| |||||   |||||||||| |||||||||||    
T  3116046 cttataaattaaaataaaagcttacttatttacataagttatttttcataagctc 3115992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 32497355 - 32497202
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| |||||||||||| ||||| ||||| || |  |||| |||| ||  ||||||  |||||| |||||||||||| || |||  |     
T  32497355 agcttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaacagtttatgaggatacaattttcgttagtgagag 32497257  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||  |||||| ||||||| |||||||||   ||||| |||| |||||||||||    
T  32497256 cttataaattaaaataaaagtttatttatttacataagctatttttcataagctc 32497202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 35282678 - 35282549
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| |||  ||||| | ||||| |||| | | |  |||| |||| ||  ||||||||||||||||||| |||||| ||| ||| |||    
T  35282678 agcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaacaacttatgaagataaaattttaattagtgaaaa 35282579  T
Q  329 cttaagaattaacataaaagcttatttatt 358  Q
    |||| ||||||| |||||||  ||||||||    
T  35282578 cttatgaattaatataaaagtctatttatt 35282549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 338 - 402
Target Start/End: Complemental strand, 1565349 - 1565286
Alignment:
Q  338 taacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||||||||||||||| | | ||| |||| ||||||||||| ||||||||||||||||||    
T  1565349 taacataaaagcttatttatttgca-aagctatttttcataagctcaaaaataagccaatccaaa 1565286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 396
Target Start/End: Original strand, 391251 - 391345
Alignment:
Q  303 gaagatacaattttcattggtgcaaacttaagaattaacataaaa-gcttatttattagaataagttattcttcataagctcgaaaataagccaa 396  Q
    ||||||||||||||| || | |  |||||| |||||||||||||| ||||||||||| | ||||| |||| ||||||||||  ||| ||||||||    
T  391251 gaagatacaattttcgttagcgagaacttatgaattaacataaaaagcttatttatttggataagctatttttcataagctaaaaattaagccaa 391345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 402
Target Start/End: Complemental strand, 994692 - 994623
Alignment:
Q  335 aattaacataaaagcttatttattagaataagtta--ttcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||||||||||| |||||| ||||||||||  || ||||||||||| |||||||| |||||||||    
T  994692 aatttacataaaagcttgtttatttgaataagttatttttttcataagctcaaaaataagtcaatccaaa 994623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 17628508 - 17628355
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    ||||||| |||||||| |||||||||||| ||||| ||||| || |  |||| |||| ||  |||||   ||||||||||||||||||| || |||  |     
T  17628508 agcttatacaaataaataagtttttatgtattatttataagttttta-aggtagtttatgaaaaaaccgtttatgaagatacaattttcgttagtgagag 17628410  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    |||   |||||| |||||||||||||||||   ||||| |||| |||||||||||    
T  17628409 cttctaaattaaaataaaagcttatttatttacataagctatttttcataagctc 17628355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 22593491 - 22593337
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| || ||||||||| |||||||||||||| |  | |  ||||  |  ||| ||  |||| |||||||||||||  || |||  ||    
T  22593491 agcttatgcaaataaataaatttttatgtattattcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaatttttgttagtgagaa 22593392  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||  |||||||||||||||||||||||| | ||||| | || | |||||||||    
T  22593391 cttataaattaacataaaagcttatttatttgcataagctgttttgcataagctc 22593337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 12871489 - 12871432
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttattta 356  Q
    |||||||||||| |||||||||  || ||||||| |||||||||||||| ||||||||    
T  12871489 ttatgaagataccattttcattaatgaaaacttatgaattaacataaaaacttattta 12871432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 26435258 - 26435086
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||||||| |||| |||||  |||| || || | || |||| ||  |||||   ||||||||||||| ||||| ||  ||  ||    
T  26435258 agcttatgcaaataaataagtttt-atgtattatttttaagtttgtcaaagtagtttatgaaaaaactgtttatgaagatacatttttcgttactgagaa 26435160  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| ||||||||||| |||  |||||||| | ||||  |||| ||||||||||  |||||||| |||||||||    
T  26435159 cttatgaattaacatataagtctatttatttgcataaactatttttcataagcttaaaaataagtcaatccaaa 26435086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 317
Target Start/End: Original strand, 18327526 - 18327614
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttc 317  Q
    |||||||||||||||| ||| |||||||| ||| |||||||||| || || | |||| ||  |||||| |||||||| | |||||||||    
T  18327526 agcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttatgaaaaaacagcttatgaacacacaattttc 18327614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 379
Target Start/End: Original strand, 31249754 - 31249834
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataa 379  Q
    |||||||||||||||||||||| |||  ||  || ||||||| ||||||| ||||||||| | | |||||||| |||||||    
T  31249754 ttatgaagatacaattttcattagtgagaatctatgaattaatataaaagtttatttatttgcaaaagttatttttcataa 31249834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 42367057 - 42367125
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||| | |||||||||| | ||||| |||| ||||||||||  ||||||||| ||||||||    
T  42367057 gaattaacataagaacttatttatttgcataagctatttttcataagcttaaaaataagcaaatccaaa 42367125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 403
Target Start/End: Original strand, 50919559 - 50919663
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    ||||||||||||||||||| ||  |  ||||| |  ||||||||| |||||||||||||| | |||| ||||| || ||||| || |||||||| ||||     
T  50919559 ttatgaagatacaattttcgttaataaaaactaataaattaacatgaaagcttatttatttgcataatttatttttaataagttcaaaaataagtcaatt 50919658  T
Q  399 caaaa 403  Q
    |||||    
T  50919659 caaaa 50919663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 381
Target Start/End: Original strand, 16225572 - 16225661
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagc 381  Q
    |||||||||||||||||||| | |||| || |||  ||||||  |||||||| |||| ||||||||||  ||||| ||||| |||||||||    
T  16225572 aaaacaacttatgaagatac-agtttcgttagtgagaacttataaattaacacaaaaacttatttatttaaataaattatttttcataagc 16225661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 25485750 - 25485879
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| || ||||||| | |||||||| | ||| |  |||| |||| ||  ||||||| ||||||||||| |||||||  | ||| |||    
T  25485750 agcttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaagataaaattttcgctagtgaaaa 25485849  T
Q  329 cttaagaattaacataaaagcttatttatt 358  Q
     |||  |||||| ||||||  |||||||||    
T  25485850 tttataaattaatataaaaatttatttatt 25485879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 368
Target Start/End: Original strand, 29333481 - 29333558
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagtt 368  Q
    ||||||||||||||| ||||||||||| || || | | | || ||||||||||||| ||||| ||||| | |||||||    
T  29333481 aaaacaacttatgaatatacaattttcgttcgtacgatcatatgaattaacataaaggcttaattatttgcataagtt 29333558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 401
Target Start/End: Complemental strand, 35590160 - 35590099
Alignment:
Q  340 acataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaa 401  Q
    ||||||||||||||||||| | ||||||| || | ||||||||  |||||||| ||||||||    
T  35590160 acataaaagcttatttatttgcataagttgttttacataagctaaaaaataagtcaatccaa 35590099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 1265691 - 1265623
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||||||||||| ||  |||||||||||  |||||| ||  ||| |||||||| |||||    
T  1265691 gaattaacataaaagcttattttttttaataagttatttctcataatcttaaaattaagccaagccaaa 1265623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 8410155 - 8410191
Alignment:
Q  233 tatgcaaataaaaaagtttttatgttttattcataag 269  Q
    |||||||||||| |||||||||||| |||||||||||    
T  8410155 tatgcaaataaataagtttttatgtattattcataag 8410191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 402
Target Start/End: Original strand, 14868484 - 14868560
Alignment:
Q  326 aaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||| |||||||||||||| ||||||||||   ||| |||||| || |||| ||| |||||||| |||| ||||    
T  14868484 aaacttatgaattaacataaaaacttatttatttatatatgttattttttataaactcaaaaataagtcaattcaaa 14868560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 383
Target Start/End: Original strand, 19395846 - 19395930
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||||||||||| || ||| || ||||  |||||| |||||| |||||||||    ||||| |||| |||||||||||    
T  19395846 ttatgaagatacaattttcgttagtgaaagcttataaattaaaataaaaacttatttatatatataagctatttttcataagctc 19395930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 383
Target Start/End: Original strand, 42591454 - 42591538
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||||| ||||| || ||| || ||||  |||||| |||||| ||||||||||   ||||| |||| |||||||||||    
T  42591454 ttatgaagatacacttttcgttagtgaaagcttataaattaaaataaaaacttatttatttacataagctatttttcataagctc 42591538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 51409791 - 51409751
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataag 269  Q
    |||||||||||||||| |||||| ||||| |||||||||||    
T  51409791 agcttatgcaaataaataagtttgtatgtattattcataag 51409751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 48591508 - 48591335
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| |||||||||| | ||||||||| |||| || |||| |||| ||  |||||| |||||||||||||||||||| ||  ||  ||    
T  48591508 agcttatgcaaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaa 48591409  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||||||| |||||||||||||||| | ||||| |||| ||||||||||| ||||||||||||||||||    
T  48591408 cttatgaattaacgtaaaagcttatttatttgcataagctatttttcataagctcaaaaataagccaatccaaa 48591335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 247 - 402
Target Start/End: Original strand, 17222849 - 17223004
Alignment:
Q  247 agtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaa 346  Q
    ||||||||||| |||||||||||||| || |||| |||| ||  ||||||  ||||||||||||||||||| || ||   |||||| |||||||||||||    
T  17222849 agtttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagttagaacttatgaattaacataaa 17222948  T
Q  347 agcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | |||||||||| ||||||| |||| ||||||||||| ||||||||||||||||||    
T  17222949 aacttatttatttgaataagctatttttcataagctcaaaaataagccaatccaaa 17223004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 7148774 - 7148946
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||||| |||||||||||||| || |||| |||| ||  |||||| ||||| || ||||||||||| || ||   ||    
T  7148774 agcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagtcagaa 7148873  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||||| |||||||||||||||||| | ||||| |||| |||||||||||  ||||||| |||||||||    
T  7148874 cttatgaattagcataaaagcttatttatttgcataagctatt-ttcataagctcagaaataagtcaatccaaa 7148946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 230 - 402
Target Start/End: Original strand, 28074368 - 28074539
Alignment:
Q  230 gcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaac 329  Q
    ||||||||||||||| ||| |||||||| |||||||||||||| || |||| |||| ||  |||| | |||||||||||||||||||| || | | ||||    
T  28074368 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-agcttatgaagatacaattttcgttagcgaaaac 28074466  T
Q  330 ttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||  ||| |||||||||| |||||||||| | ||||| |||| ||||||| ||  ||||||||||||||||||    
T  28074467 ttgtgaaataacataaaatcttatttatttgcataagctatttttcataaactaaaaaataagccaatccaaa 28074539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 229 - 409
Target Start/End: Original strand, 36740906 - 36741086
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||| | |||| ||||||||| || | || |||| ||  || |||  | |||||||||||||||||||| |||  ||    
T  36740906 agcttatgcaaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgagaa 36741005  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaaaagccc 409  Q
    |||| |||| |||| ||||||||||||||| | ||||| |||| ||||||||||  |||||||||||||||||| ||||||    
T  36741006 cttatgaatcaacacaaaagcttatttatttgcataagctatttttcataagctaaaaaataagccaatccaaacaagccc 36741086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 12495730 - 12495555
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctcta--ggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgca 326  Q
    |||||||||||||||| ||| |||||||| |||||||||||||| || |  ||| |||| ||  |||||| || || |||||||||| |||||| |||      
T  12495730 agcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaatattcattagtgag 12495631  T
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||  ||||||||||||| |||||||||| | ||||| || | ||||||||||| |||||||| |||||||||    
T  12495630 aacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaaaaataagacaatccaaa 12495555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 23297440 - 23297599
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||||| ||||||||||| || || |||| |||| ||   ||||| |||||||||||||||||||  || | |  ||    
T  23297440 agcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatg---aaacagcttatgaagatacaatttttgttagcgagaa 23297536  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataa 391  Q
    |||| |||||| |||||||||||||||||| | ||||| |||| ||||||||||| |||||||    
T  23297537 cttatgaattagcataaaagcttatttatttgcataagctatttttcataagctcaaaaataa 23297599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 23335644 - 23335817
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    ||||||||||||||||  || |||||||| |||||||||||| | || |||| |||| ||  |||||| ||||||||||||||||||||||  |||  ||    
T  23335644 agcttatgcaaataaatgagattttatgtattattcataagcatatcaaggtagtttatgaaaaaacagcttatgaagatacaattttcataagtgagaa 23335743  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||||||||||||| ||| |||| | | || || ||||  |||||||||  |||||||| |||||||||    
T  23335744 cttatgaattaacataaaaacttgtttaattgcattagctatttctcataagctaaaaaataaggcaatccaaa 23335817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 38345905 - 38345734
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    ||||||| |||||||| ||| ||||||||  |||||||||| || || | || |||| ||  |||||||||||||||||||||||||| ||| |    ||    
T  38345905 agcttatccaaataaataagcttttatgtagtattcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagatacaatttttattagccagaa 38345807  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||||||||||||||||||||||||   ||||| |||| || |||||||| ||||||||||||||||||    
T  38345806 cttatgaattaacataaaagcttatttatttacataagctatt-tttataagctcaaaaataagccaatccaaa 38345734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 262 - 401
Target Start/End: Complemental strand, 36255087 - 36254948
Alignment:
Q  262 ttcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattaga 361  Q
    ||||||||||| || | || |||||||  |||||| ||||||||||||||||||| ||| |||  |||||| ||||||||||||||||||||||||  |     
T  36255087 ttcataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagatacaattttaattagtgagaacttatgaattaacataaaagcttatttatctgc 36254988  T
Q  362 ataagttattcttcataagctcgaaaataagccaatccaa 401  Q
    ||||| |||| |||||||||   |||||||| ||||||||    
T  36254987 ataagctatttttcataagcaaaaaaataagtcaatccaa 36254948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 232 - 402
Target Start/End: Original strand, 29877644 - 29877816
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    ||||||||||||| ||| |||||||| ||||||||||||||    |||| |||| ||  ||| || |||||||||||||||||||  || |||  |||||    
T  29877644 ttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagcttatgaagatacaatttttgttagtgagaactt 29877743  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaa--taagccaatccaaa 402  Q
    | |||||||||||||||||||| |||| | ||||| |||| |||||||| |  ||||  ||||||||||||||    
T  29877744 atgaattaacataaaagcttatatatttgcataagctatttttcataagataaaaaaagtaagccaatccaaa 29877816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 231 - 402
Target Start/End: Complemental strand, 42611950 - 42611779
Alignment:
Q  231 cttatgcaaataaaaaagtttt-tatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaac 329  Q
    |||||||||||||| ||| ||| ||||| |||||||||||||| || || | |||| ||  ||||||||||||||||||||| ||||| | | ||  |||    
T  42611950 cttatgcaaataaataagctttatatgtattattcataagcttgtcgag-tagtttatgaaaaaacaacttatgaagatacagttttcgtag-tgacaac 42611853  T
Q  330 ttaagaattaacataaaagcttatttattagaataagt-tattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||| ||||||||||||||||||||||||| | |||| | |||| ||||||||||  |||||| |||||||||||    
T  42611852 ttatgaattaacataaaagcttatttatttgcataaatctatttttcataagcttaaaaatacgccaatccaaa 42611779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 42796780 - 42796832
Alignment:
Q  6 agcatctaccatcccctttgttagatgccacttctgtgcgtcttttgctgcaa 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42796780 agcatctaccatcccctttgttagatgccacttctgtgcgtcttttgctgcaa 42796832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 229 - 412
Target Start/End: Original strand, 896972 - 897155
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||  |||||||| |||||||||||||| || | || |||| ||  ||||||| ||| | |||||| |||||| || ||| |||    
T  896972 agcttatgcaaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaa 897071  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaaaagccctta 412  Q
    ||||  |||||| ||||||||||||||||| | ||||  |||| |||||||| |  |||||||||| ||| ||| | |||||||    
T  897072 cttataaattaatataaaagcttatttatttgcataaactatttttcataagttaaaaaataagccgatcaaaacaggccctta 897155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 229 - 383
Target Start/End: Original strand, 41228905 - 41229059
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    ||||||||||  |||| | | |||||| | |||||||||||||| |  |||| |||| ||  ||||||||| |||||||||||||||||||| ||   ||    
T  41228905 agcttatgcaggtaaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaagatacaattttcattagttagaa 41229004  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    |||| ||||||| ||||||||| ||||||| | ||||| |||| |||||||||||    
T  41229005 cttatgaattaatataaaagctaatttatttgcataagctatttttcataagctc 41229059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 488468 - 488295
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||  ||| |||||||| ||||| |||||||| || |||| |||| ||  ||||   ||| | ||||||||||||| ||| |||  ||    
T  488468 agcttatgcaaataagtaagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaattgcttgtaaagatacaatttttattagtgagaa 488369  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||||||||||||||||||||||||   ||||| |||| || |||||||  ||| |||| |||||||||    
T  488368 cttatgaattaacataaaagcttatttatttccataagctattttttataagcttaaaagtaagtcaatccaaa 488295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 34526351 - 34526248
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    |||||||||||||||||||  | |||  |||||| ||||||||||||||||||||||||| | ||||  |||| ||||||||||||||| |||| ||||     
T  34526351 ttatgaagatacaattttccatagtgagaacttatgaattaacataaaagcttatttatttgcataaactatttttcataagctcgaaagtaagtcaatt 34526252  T
Q  399 caaa 402  Q
    ||||    
T  34526251 caaa 34526248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 299 - 402
Target Start/End: Original strand, 48687006 - 48687108
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    |||| ||||||||||||||||| |||  |||||| ||||||||||| ||| ||||||||| | ||||| |||| ||||||||||| |||||||| |||||    
T  48687006 ttataaagatacaattttcattagtgagaacttatgaattaacatataagtttatttatttgcataagctatt-ttcataagctcaaaaataaggcaatc 48687104  T
Q  399 caaa 402  Q
    ||||    
T  48687105 caaa 48687108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 232 - 358
Target Start/End: Complemental strand, 18424358 - 18424233
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    |||| |||||||| ||| |||||||| |||||||||| ||| |  |||| |||| ||  ||||||| ||||||||||||||||||  ||  || ||||||    
T  18424358 ttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatga-aaaacaatttatgaagatacaatttttgttattgaaaactt 18424260  T
Q  332 aagaattaacataaaagcttatttatt 358  Q
    | |||||||||||||||||||||||||    
T  18424259 atgaattaacataaaagcttatttatt 18424233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 231 - 402
Target Start/End: Complemental strand, 27368234 - 27368062
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||| |||||| | ||||||||||| || || | || | || ||  ||||||  |||| ||||||||||| || ||| || || |     
T  27368234 cttatgcaaataaataagcttttatatattattcataagtttgtcaatgtagcttatgaaaaaacagtttataaagatacaattatcgttgatgaaacca 27368135  T
Q  331 taagaattaacataaaagcttatttattagaataagtta-ttcttcataagctcgaaaataagccaatccaaa 402  Q
    ||| || ||||||||| ||||||||||| ||||||| || || ||||||||||  ||||||||||||||||||    
T  27368134 taaaaagtaacataaatgcttatttatttgaataagatattttttcataagctaaaaaataagccaatccaaa 27368062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 234 - 401
Target Start/End: Original strand, 18258018 - 18258178
Alignment:
Q  234 atgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaa 333  Q
    ||||||||||| ||||||| |||| |||||||||| ||| || || || ||| ||  |||||||||||||||| |||||||||| || ||| |||||||     
T  18258018 atgcaaataaataagtttt-atgtattattcataaacttatcaagatgttttttga-aaaacaacttatgaagttacaattttcgttagtgaaaacttat 18258115  T
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaa 401  Q
    |||     ||||||| ||||||||| | |||||||||| |  |||||||| |||||||| ||||||||    
T  18258116 gaa-----ataaaagtttatttatttgtataagttattttctataagctcaaaaataagacaatccaa 18258178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 18630917 - 18630807
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    |||||| |||||||||||| | ||||| || |||  |||||| ||||||| ||||||||||||||||| | ||||| |||| ||||||||||| ||||||    
T  18630917 aaaacagcttatgaagataaagttttcgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctc-aaaata 18630819  T
Q  391 agc-caatccaa 401  Q
    ||| ||||||||    
T  18630818 agctcaatccaa 18630807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 231 - 382
Target Start/End: Complemental strand, 46704351 - 46704201
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    ||||||||||||| || | |||||| | |||||||| ||||| |  |||| |||| ||  |||||| |||||||||||| |||||||||| |||  ||||    
T  46704351 cttatgcaaataataa-gcttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaaattttcattagtgagaact 46704253  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagct 382  Q
    || ||||||| ||||||  ||| ||||| | |||||||||| ||||||||||    
T  46704252 tatgaattaatataaaaagttacttatttgcataagttatttttcataagct 46704201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 327 - 402
Target Start/End: Original strand, 48667770 - 48667845
Alignment:
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||| ||||||||||||||||||||||||| | ||||| |||| ||||| ||||  ||||||||||||||||||    
T  48667770 aacttatgaattaacataaaagcttatttatttgcataagctatttttcatgagcttaaaaataagccaatccaaa 48667845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 304 - 402
Target Start/End: Complemental strand, 42153171 - 42153073
Alignment:
Q  304 aagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||| |||||||| || |||  |||| | ||||||||||||||||||||||||| | ||||| |||| | | ||||||| ||||||||||||||||||    
T  42153171 aagatgcaattttcgttagtgacaactcatgaattaacataaaagcttatttatttgcataagctattttacgtaagctcaaaaataagccaatccaaa 42153073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 340 - 402
Target Start/End: Original strand, 43699539 - 43699601
Alignment:
Q  340 acataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||||||||||||| | ||||||| || ||||||||||| ||||||||||||||||||    
T  43699539 acataaaagcttatttatttgtataagttgtttttcataagctcaaaaataagccaatccaaa 43699601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 825684 - 825813
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||| | | |||||||||||| | ||||| | |||| ||  |||||| || ||||||||||| ||||  || ||| ||     
T  825684 agcttatgcaaataaataagcttttctatattattcataagcctgtctagttagtttatgaaaaaacagctcatgaagatacattttttgttagtgaaag 825783  T
Q  329 cttaagaattaacataaaagcttatttatt 358  Q
    |||| |||||||||||||| ||||||||||    
T  825784 cttatgaattaacataaaatcttatttatt 825813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 948074 - 948250
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaa-caacttatgaagatacaattttcattggtgcaa 327  Q
    |||||||| ||||||| ||| |||||||| ||||||||||  || || |||| |||| ||  |||| || ||||| |||||||||||||  |  | |  |    
T  948074 agcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttatgaaaaaaacagcttataaagatacaatttttgtcagagaga 948173  T
Q  328 acttaagaattaaca--taaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||| |||||||||  |||||||||||| ||| | ||||| || ||||||||||||| |||||||| |||||||||    
T  948174 acttatgaattaacacataaaagcttattcatttgcataagctactcttcataagctcaaaaataagtcaatccaaa 948250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 326 - 402
Target Start/End: Original strand, 3564305 - 3564381
Alignment:
Q  326 aaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||  |||||||||||||| ||||||||| | ||||| |||| ||||||||||| |||||||| |||||||||    
T  3564305 aaacttataaattaacataaaagattatttatttgcataagctatttttcataagctcaaaaataagtcaatccaaa 3564381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 9319120 - 9319179
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    |||||||| |||||||||||||  || |||||||| ||||||||||||||||||||||||    
T  9319120 ttatgaagctacaattttcattactgaaaacttaaaaattaacataaaagcttatttatt 9319179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 34633455 - 34633521
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    ||||||||||||||| |||||||||||||  |||  |||||| |||||||||||||||||||||||||    
T  34633455 aaaacaacttatgaa-atacaattttcataagtgagaacttatgaattaacataaaagcttatttatt 34633521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 392
Target Start/End: Original strand, 47202828 - 47202989
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| |||||||||||| ||| | ||||  || |  |||| |||| ||  ||||| | ||||||||||||||||||| || |||  |     
T  47202828 agcttatgcaaataaataagtttttatgtattacttataaattttta-aggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgagat 47202926  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataag 392  Q
    ||||  |||||| ||||||||||| |||||   |||||||||| ||||||||||| ||||||||    
T  47202927 cttataaattaaaataaaagcttacttatttatataagttatttttcataagctc-aaaataag 47202989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 48721884 - 48721995
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    |||| |||||||||||||| ||||||  || |||  |||||| ||||||| ||||||||||||||||| | |||| ||||| || |||||||  ||||||    
T  48721884 aaaataacttatgaagatataatttttgttagtgagaacttatgaattaatataaaagcttatttatttgtataaattattttttataagctaaaaaata 48721983  T
Q  391 agccaatccaaa 402  Q
    || |||| ||||    
T  48721984 agtcaattcaaa 48721995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 282 - 392
Target Start/End: Complemental strand, 2330504 - 2330394
Alignment:
Q  282 gtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagc 381  Q
    |||| ||| ||| |||| ||||||||||||||||||||| |||  |||||| ||| ||| ||||||| ||||||||  | ||| ||| || |||||||||    
T  2330504 gtttatgtaaaagcaacgtatgaagatacaattttcatttgtgagaacttatgaaataaaataaaagtttatttatctgcataggttgtttttcataagc 2330405  T
Q  382 tcgaaaataag 392  Q
    || ||||||||    
T  2330404 tcaaaaataag 2330394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 340 - 402
Target Start/End: Complemental strand, 23297468 - 23297406
Alignment:
Q  340 acataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||||||||||||| | ||||| |||| | ||||||||| ||||||||||||||||||    
T  23297468 acataaaagcttatttatttgcataagctattttgcataagctcaaaaataagccaatccaaa 23297406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 260 - 402
Target Start/End: Original strand, 28663606 - 28663747
Alignment:
Q  260 tattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatta 359  Q
    ||||||||||||| || |||| |||| ||  ||||||  || |||||||||||||||| ||  ||  |||||| ||| ||||||||||||||| ||| |     
T  28663606 tattcataagcttgtcaaggtagtttatgaaaaaacagattctgaagatacaattttcgtta-tgagaacttatgaactaacataaaagcttaattagtt 28663704  T
Q  360 gaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | ||||  |||| ||||||||||| |||||||| |||||||||    
T  28663705 gcataaactatttttcataagctcaaaaataagtcaatccaaa 28663747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 379
Target Start/End: Original strand, 31022409 - 31022552
Alignment:
Q  234 atgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaa 333  Q
    ||||||||||| ||||||||||||||| || ||||||||| | | || |||  ||  |||||| ||||| |||||||||||||| |  ||| |||||||     
T  31022409 atgcaaataaataagtttttatgttttttt-ataagcttcacaaagttgtta-tgaaaaaacagcttataaagatacaattttcgtcagtgaaaacttat 31022506  T
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataa 379  Q
    |||||||  |||| ||||||||||| | ||||||| || |||||||    
T  31022507 gaattaaggtaaatgcttatttatttgcataagttgtttttcataa 31022552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 250 - 402
Target Start/End: Original strand, 32628801 - 32628953
Alignment:
Q  250 ttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagc 349  Q
    |||| ||| |||||||||||||| || ||||  ||| ||  |||||| ||| ||||||||||||||| ||  |||  |||||| |||||||||||||||     
T  32628801 ttttttgtgttattcataagcttgtcgaggtaatttatgaaaaaacagcttgtgaagatacaattttgatcagtgagaacttacgaattaacataaaagt 32628900  T
Q  350 ttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
       | ||||   ||||| |||| |||||||| || ||||||||||||||||||    
T  32628901 aggtatatttacataagctatttttcataaggtcaaaaataagccaatccaaa 32628953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 335 - 395
Target Start/End: Original strand, 35405791 - 35405851
Alignment:
Q  335 aattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagcca 395  Q
    |||||||||||||||||||||||| | ||||| |||| ||||||||||  |||||||||||    
T  35405791 aattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagcca 35405851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 298 - 402
Target Start/End: Original strand, 41071421 - 41071525
Alignment:
Q  298 cttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaat 397  Q
    ||||||||| ||||||| ||||| |||  |||||   ||||||||||||||||||||||||    |||| |||| ||||||||||  || ||||||||||    
T  41071421 cttatgaagttacaattctcattagtgagaacttgtaaattaacataaaagcttatttattttcttaagctatttttcataagctaaaatataagccaat 41071520  T
Q  398 ccaaa 402  Q
    |||||    
T  41071521 ccaaa 41071525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 317
Target Start/End: Complemental strand, 52274204 - 52274116
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttc 317  Q
    |||||||||||||||| ||  |||||||| ||||| |||||||| || |||| ||||  |  |||||| ||||||||||||||||||||    
T  52274204 agcttatgcaaataaataaacttttatgtattattgataagcttatcaaggtagtttacgaaaaaacagcttatgaagatacaattttc 52274116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 1374445 - 1374358
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaa-caacttatgaagatacaattttc 317  Q
    ||||||||||||||||||||||||||  | |||||||||||| ||  ||| |||| ||  |||| || ||||||||||||||||||||    
T  1374445 cttatgcaaataaaaaagtttttatgcatgattcataagcttgtcatggtagtttatgaaaaaaccagcttatgaagatacaattttc 1374358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 11256683 - 11256616
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    |||||| |||||||||||||||||||  || | |  |||||| |||||||||||||||||||||||||    
T  11256683 aaaacagcttatgaagatacaattttagttagcgagaacttatgaattaacataaaagcttatttatt 11256616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 402
Target Start/End: Complemental strand, 29877669 - 29877607
Alignment:
Q  340 acataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||||||||||||| | |||| || || | ||||||||| ||||||||||||||||||    
T  29877669 acataaaagcttatttatttgcataaattgttttgcataagctcaaaaataagccaatccaaa 29877607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 392
Target Start/End: Complemental strand, 52700626 - 52700465
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||| ||||||| |||| ||||||| ||||| |||||||| |  | ||||||| ||  |||| |  |||||||||||| |||||| || ||   ||||    
T  52700626 cttatgtaaataaataagtctttatgtattatttataagcttgtaaaagtggtttatgaaaaaatagtttatgaagatacgattttcgttagtaagaact 52700527  T
Q  331 ta-agaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataag 392  Q
    || | |||||||||||||| |||||||||   ||||||| || ||||||||||| ||||||||    
T  52700526 tataaaattaacataaaagattatttatttacataagttctttttcataagctc-aaaataag 52700465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 2702734 - 2702670
Alignment:
Q  294 acaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    |||||||||||| |||||||||||||| ||   | |||| ||||||||||||||||||| |||||    
T  2702734 acaacttatgaatatacaattttcattagtaagatcttatgaattaacataaaagcttaattatt 2702670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 4331437 - 4331505
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||| ||||||||||   |||||||||| ||||||| ||| || |||||| ||||||||    
T  4331437 gaattaacataaaaacttatttatttacataagttatttttcataaactcaaagataagcaaatccaaa 4331505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 22273844 - 22273956
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagct-cgaaaat 389  Q
    |||||| |||||||||||||||||||  || |||  || ||| ||||||||||||||| ||||||||| | ||||  |||| ||| ||||||   |||||    
T  22273844 aaaacagcttatgaagatacaatttttgttagtgagaagttatgaattaacataaaagtttatttatttgcataatctatttttcgtaagctaaaaaaat 22273943  T
Q  390 aagccaatccaaa 402  Q
    |||| ||||||||    
T  22273944 aagctaatccaaa 22273956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 320
Target Start/End: Complemental strand, 43699565 - 43699474
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaaca--acttatgaagatacaattttcatt 320  Q
    ||||| |||||||| ||| |||||||| |||||||||||||| || | || |||| ||  ||||||   |||||||||||||||||||||||    
T  43699565 cttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaaaaacagctcttatgaagatacaattttcatt 43699474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 392
Target Start/End: Complemental strand, 43740156 - 43739997
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    ||||| ||||||| |||||||||  | |||||||||| ||| |||| ||  ||| ||  ||||||  ||||||||||||||||||  ||  || ||| ||    
T  43740156 ttatgaaaataaataagtttttacatattattcataaacttgtctaagtaatttatga-aaaacagtttatgaagatacaatttttcttaatgaaaattt 43740058  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataag 392  Q
    |  |||| ||||| ||| |||||||||  ||||||||||| || |||||||| ||||||||    
T  43740057 ataaatttacatataagtttatttatttaaataagttatttttaataagctcaaaaataag 43739997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 392
Target Start/End: Original strand, 11298656 - 11298746
Alignment:
Q  301 atgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataag 392  Q
    ||||||||| | ||||| || |||  |||||||||||||  ||||||| ||||||||| | ||||| |||| ||||||||||| ||||||||    
T  11298656 atgaagataaagttttcgttagtgagaacttaagaattattataaaagtttatttatttgcataagctatttttcataagctc-aaaataag 11298746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 402
Target Start/End: Complemental strand, 22273820 - 22273761
Alignment:
Q  343 taaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||||| | ||||| |||| | ||||||||| |||||||| |||||||||    
T  22273820 taaaagcttatttatttgcataagctattatgcataagctcaaaaataagtcaatccaaa 22273761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 34633430 - 34633367
Alignment:
Q  339 aacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||| ||||||||| | ||||||| || | ||||||||  ||||||||||||||||||    
T  34633430 aacataaaagtttatttatttgcataagttgttttgcataagctaaaaaataagccaatccaaa 34633367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 35124389 - 35124472
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaa 312  Q
    |||||||||||||| | ||  ||||||||  ||||||||||||| || |||| |||| ||  |||||| |||||||||||||||    
T  35124389 agcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaa 35124472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 213029 - 212952
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagata 309  Q
    |||||||||||||| ||||||| || | |||||||||||||| |  |||| |||| ||  |||||||||||||||||||    
T  213029 cttatgcaaataaataagtttt-atttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagata 212952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 8130560 - 8130634
Alignment:
Q  308 tacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagct 382  Q
    |||||||||  || ||| ||||||| |||||||||||||| |||||||||| | | ||| |||| ||||||||||    
T  8130560 tacaatttttgttagtgaaaacttatgaattaacataaaaacttatttatttgcacaagctatttttcataagct 8130634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 42617313 - 42617160
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| | ||||||| || ||||| ||||| || |  |||| |||| ||  |||| |  |||||||||||  |||||| || ||| |||    
T  42617313 agcttatgcaaataaatacgtttttaagtattatttataagttttta-aggtagtttatgaaaaaatagtttatgaagatatgattttcgttagtgaaaa 42617215  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||  |||||| |||||| ||||||||||   ||||| |||| |||||||||||    
T  42617214 cttataaattaaaataaaaacttatttatttacataagctatttttcataagctc 42617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 402
Target Start/End: Original strand, 1374420 - 1374481
Alignment:
Q  341 cataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||| ||| |||||| | ||||||| || | ||||||||| ||||||||||||||||||    
T  1374420 cataaaaacttttttatttgcataagtttttttgcataagctcaaaaataagccaatccaaa 1374481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 42611929 - 42611986
Alignment:
Q  345 aaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||| | ||||||| || | ||||||||  ||||||||||||||||||    
T  42611929 aaagcttatttatttgcataagttgttttgcataagctaaaaaataagccaatccaaa 42611986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 400
Target Start/End: Complemental strand, 43699455 - 43699362
Alignment:
Q  307 atacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatcca 400  Q
    |||||||||||| | |||  |||||| |||||||||||||| |||||||||| | ||||| |||| || || || |  ||||||||| ||||||    
T  43699455 atacaattttcactagtgggaacttatgaattaacataaaaacttatttatttgcataagctatttttaatgagataaaaaataagctaatcca 43699362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 11679149 - 11679057
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||| ||||||||||||||||||| || ||  ||| |||  |||||||||||||  || |||||| | ||||| |||| || ||||||||    
T  11679149 aaaacaaattatgaagatacaattttcgttagttaaaatttataaattaacataaaatgttttttatttgtataagctatttttgataagctc 11679057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 11687428 - 11687336
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||| ||||||||||||||||||| || ||  ||| |||  |||||||||||||  || |||||| | ||||| |||| || ||||||||    
T  11687428 aaaacaaattatgaagatacaattttcgttagttaaaatttataaattaacataaaatgttttttatttgtataagctatttttgataagctc 11687336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 40240661 - 40240489
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||||| |||||||||||| | ||||||| |||| ||  ||||||||||||||||||||||||||| || |||  |     
T  40240661 agcttatgcaaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgagag 40240562  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| ||||||| ||||||||||||||||| | ||||| |||| ||||||||||| |||||||| |||||||||    
T  40240561 cttatgaattaagataaaagcttatttatttgcataagctatttttcataagctc-aaaataagtcaatccaaa 40240489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 43080018 - 43079845
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||||| |||||||||||||| || |||| |||| ||  |||||| |||||||||||||||||||| |   ||  ||    
T  43080018 agcttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtgattgagaa 43079919  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||||||| |||||||||||||||| ||||||| |||| |||||||||||| ||||||| |||||||||    
T  43079918 cttatgaattaacttaaaagcttatttatttgaataagctatttttcataagctcgtaaataagtcaatccaaa 43079845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 232 - 402
Target Start/End: Original strand, 585025 - 585194
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    ||||||||||||| ||| |||||||  ||||||| ||||||||  |||| |||| ||  ||||||||||||||||||||||||||| || ||   |||||    
T  585025 ttatgcaaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtttgaactt 585124  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||||||| ||||||||| ||| ||||||  |||| ||||||||||| |||||||||||| |||||    
T  585125 aagaattaacatataagcttattgatttgaataa-ctatttttcataagctcaaaaataagccaacccaaa 585194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 231 - 402
Target Start/End: Complemental strand, 40581159 - 40580987
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaa-caacttatgaagatacaattttcattggtgcaaac 329  Q
    |||||||||||||| ||| |||||||| ||||| |||||||| || |||| |||| ||  |||| || | |||||||| ||||||||| || |||  |||    
T  40581159 cttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacagcgtatgaagaaacaattttcgttagtgagaac 40581060  T
Q  330 ttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||| |||||||||||||| |||||||||| | ||||| |||| ||||| | ||| ||||||||||||| ||||    
T  40581059 ttatgaattaacataaaatcttatttatttgcataagatatttttcatcaactcaaaaataagccaattcaaa 40580987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 231 - 402
Target Start/End: Complemental strand, 53218122 - 53217952
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    ||||||| |||||| ||| |||||||| |||||||||||||| || |||| |||| ||  |||||||||| |||||||||||||||| || |||  ||||    
T  53218122 cttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaattttcgttagtgagaact 53218023  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||  |||||| |||||||||||||| |  | ||| | |||| ||||||||||  |||||||||||| |||||    
T  53218022 tataaattaaaataaaagcttattt-tctgcataggatatttttcataagcttaaaaataagccaaaccaaa 53217952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 20685849 - 20685960
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    |||||||||||||||||||||||||||||| |||  |||||  |||||| ||||||| |||||||||| | |||||  ||| ||||||||||  ||||||    
T  20685849 aaaacaacttatgaagatacaattttcattagtgagaacttgtgaattatcataaaaacttatttatttggataagcaatttttcataagctaaaaaata 20685948  T
Q  391 agccaatccaaa 402  Q
    || |||||||||    
T  20685949 agtcaatccaaa 20685960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 234 - 369
Target Start/End: Complemental strand, 42956258 - 42956123
Alignment:
Q  234 atgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaa 333  Q
    ||||||||||| |||||||||||| |||||||||| ||| || | || |||| ||  |||||| ||||| |||||||||||||| || |||  ||||||     
T  42956258 atgcaaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgagaacttat 42956159  T
Q  334 gaattaacataaaagcttatttattagaataagtta 369  Q
     ||||||||||||| |||||||||| | ||||||||    
T  42956158 aaattaacataaaaacttatttatttgcataagtta 42956123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 237 - 402
Target Start/End: Original strand, 3845865 - 3846030
Alignment:
Q  237 caaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaa 336  Q
    |||||||| ||| |||||| | |||||||||||||| || || | |||| || ||||||| | ||||||||||| ||||||  | ||| |||| || |||    
T  3845865 caaataaataagcttttatatattattcataagcttgtcaagctagtttatgacaaaacagcatatgaagatac-attttcgctagtgaaaacatatgaa 3845963  T
Q  337 ttaacataaaagcttatttattagaataagttattcttca-taagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||||||||||| | ||||| ||||  ||| ||||||| |||||||| |||||||||    
T  3845964 ttaacataaaagcttatttatttgcataagctatttctcattaagctcaaaaataaggcaatccaaa 3846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 350
Target Start/End: Complemental strand, 3870310 - 3870189
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||| ||| ||| ||||||||||| ||||||||||| || |||| |||| ||  |||||||| ||||| |||||| ||||||||  ||  ||    
T  3870310 agcttatgcaaaaaaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaacaacatatgatgatacacttttcattaatgagaa 3870211  T
Q  329 cttaagaattaacataaaagct 350  Q
    |||| |||||||||||||||||    
T  3870210 cttatgaattaacataaaagct 3870189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 259 - 402
Target Start/End: Complemental strand, 48597921 - 48597777
Alignment:
Q  259 ttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaa-gaattaacataaaagcttatttat 357  Q
    ||||||||||| || || |||| || | ||  ||||||||||||||||||||||||||| |  |||  ||||||| ||||||||||||||||||||||||    
T  48597921 ttattcataagtttgtcgaggtagtgtatgaaaaaacaacttatgaagatacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttat 48597822  T
Q  358 tagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | | | |   |||| ||| ||||||| ||||||||||||||||||    
T  48597821 ttgcaaacactatttttcgtaagctcaaaaataagccaatccaaa 48597777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 22809278 - 22809104
Alignment:
Q  229 agcttatgcaaataaaaaag-tttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaa 327  Q
    |||||||||||||||| ||| ||||||| | |||||||||||||| || |||| |||| ||  |||||  |||||||||||||||||||| ||      |    
T  22809278 agcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatgaagatacaattttcgttaagaaga 22809179  T
Q  328 acttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||| |||||||||||||| |||||||||| | | ||| | |  ||||||||||| ||||||| |||| |||||    
T  22809178 acttatgaattaacataaaaacttatttatttgcacaagctttatttcataagctcaaaaataaaccaagccaaa 22809104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 398
Target Start/End: Complemental strand, 30321739 - 30321645
Alignment:
Q  303 gaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    |||||||||||||||||||||| |||||||  |||||| ||||| ||||||||||| | ||||| |||| ||| ||||||  ||||||||||||||    
T  30321739 gaagatacaattttcattggtgaaaacttataaattaa-ataaaggcttatttatttgcataagctatttttcttaagctaaaaaataagccaatc 30321645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 381
Target Start/End: Complemental strand, 34707776 - 34707645
Alignment:
Q  250 ttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagc 349  Q
    |||||||| |||||||||||||| |  |||| |||| ||  |||||| || | ||||||||||||||| || | |  |||||| |||||||||||||| |    
T  34707776 ttttatgtattattcataagcttgttaaggtagtttatgaaaaaacagctaacgaagatacaattttcgttagcgagaacttacgaattaacataaaaac 34707677  T
Q  350 ttatttattagaataagttattcttcataagc 381  Q
    ||||||||| |  ||||||||| |||||||||    
T  34707676 ttatttatttgcttaagttatttttcataagc 34707645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 299 - 393
Target Start/End: Original strand, 37243538 - 37243631
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc 393  Q
    |||||||| |||| ||||||||||||  |||||| ||||||| ||||||||||| ||||| | ||||| | || ||||||||||| |||||||||    
T  37243538 ttatgaaggtacacttttcattggtgagaacttatgaattaagataaaagcttacttatttgcataagctctttttcataagctc-aaaataagc 37243631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 51409395 - 51409567
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||  |||||| | |||||||| || || || |||| |||| ||  ||||||||||||||||||| ||||| || |  || |||    
T  51409395 agcttatgcaaataaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaacaacttatgaagataaaatttccaatactgaaaa 51409494  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc-caatccaaa 402  Q
     ||| ||||||| |||||| |||||||||| | ||||| || | ||||||| ||| ||||||||| |||||||||    
T  51409495 attatgaattaatataaaa-cttatttatttgtataagctacttttcataatctc-aaaataagctcaatccaaa 51409567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 4974375 - 4974467
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||| ||||||| ||||||| ||  |||||  || |||| ||||||||||||||||||||||||| | ||||| | || |||||||||||    
T  4974375 aaaacaagttatgaatatacaatatttgttggtaaaatcttatgaattaacataaaagcttatttatttgcataagctctttttcataagctc 4974467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 35480380 - 35480313
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||||| ||||| ||||||| | |||||||||| ||||||||||| |||||||| |||||||||    
T  35480380 gaattaacatacaagctcatttatttgcataagttatt-ttcataagctcaaaaataagtcaatccaaa 35480313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 46573433 - 46573365
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||||||||||||||||||| | ||||| |||| ||| ||||||  ||||||||| ||||||||    
T  46573433 gaattaacataaaagcttatttatttgcataagctatttttcctaagctaaaaaataagcgaatccaaa 46573365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 391
Target Start/End: Complemental strand, 52895427 - 52895327
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    |||||||||| ||||| |||||||||| || |||  || ||| ||||||||||||||||||||||||| |  |||   ||| ||||||||||| ||||||    
T  52895427 aaaacaacttctgaagttacaattttcgttagtgagaatttatgaattaacataaaagcttatttatttgcctaaacaatttttcataagctcaaaaata 52895328  T
Q  391 a 391  Q
    |    
T  52895327 a 52895327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 17752145 - 17752053
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataag 392  Q
    ||||||||||||||||||| || ||   ||||||  |||||||||||||| |||||||||   ||||| |||| ||||||||||| ||||||||    
T  17752145 ttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagctc-aaaataag 17752053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 19053465 - 19053373
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataag 392  Q
    ||||||||||||||||||| || ||   ||||||  |||||||||||||| |||||||||   ||||| |||| ||||||||||| ||||||||    
T  19053465 ttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagctc-aaaataag 19053373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 20174962 - 20174874
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataa 379  Q
    ||||||||||||||| ||||||||||| || ||   | |||| |||||| |||||||||||||||||| | ||||| | || |||||||    
T  20174962 aaaacaacttatgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttcataa 20174874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 33946568 - 33946480
Alignment:
Q  295 caacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||| ||||| ||||||| ||  ||  |||||| ||||||| ||||||||| ||||||| | ||||| |||| |||||||||||    
T  33946568 caacttatgtagataaaattttcgttaatgagaacttatgaattaatataaaagctcatttatttgcataagctatttttcataagctc 33946480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 402
Target Start/End: Complemental strand, 53261754 - 53261678
Alignment:
Q  327 aacttaagaattaaca-taaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||| ||||||||| |||||||||||||| | | ||||| |||| ||||||||||| ||| |||| |||||||||    
T  53261754 aacttatgaattaacaataaaagcttatttaattgcataagctatttttcataagctcaaaactaagtcaatccaaa 53261678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 392
Target Start/End: Complemental strand, 3876347 - 3876185
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||| |||||||  || |||||| | |||||||||| ||  |  |||| |||| ||  ||||||||||| |||| || | ||||  || || | ||    
T  3876347 agcttatgtaaataaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaacaacttaagaaggtaaagtttttgttagttctaa 3876248  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataag 392  Q
    |||| ||||||| |||||| |||||||||| | ||||| |||| ||||||||||| ||||||||    
T  3876247 cttatgaattaatataaaaacttatttatttgcataagctatttttcataagctc-aaaataag 3876185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 316
Target Start/End: Complemental strand, 52421225 - 52421138
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaatttt 316  Q
    |||||| ||||||||| ||| |||||||| |||||||||||||| || |||| |||| ||  |||| |  | ||||||||||||||||    
T  52421225 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatttt 52421138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 340 - 402
Target Start/End: Complemental strand, 29270391 - 29270329
Alignment:
Q  340 acataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||||||||   ||||||| || | ||||||||| |||||||| |||||||||    
T  29270391 acataaaagcttatttattcctataagttgttttgcataagctcaaaaataagtcaatccaaa 29270329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 317
Target Start/End: Original strand, 29270373 - 29270451
Alignment:
Q  239 aataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttc 317  Q
    |||||| ||| |||||||| |||||||||||||| || || |  ||| ||  |||||| ||||||||||||||||||||    
T  29270373 aataaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacagcttatgaagatacaattttc 29270451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 329 - 383
Target Start/End: Original strand, 38524190 - 38524244
Alignment:
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    |||| ||||||||||||||||||||||||| | ||||| | || |||||||||||    
T  38524190 cttatgaattaacataaaagcttatttatttgcataagctctttttcataagctc 38524244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 48816780 - 48816846
Alignment:
Q  292 aaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    |||||||||||||| ||||||||||| |||||   | ||||  ||||||| ||||||||||||||||    
T  48816780 aaacaacttatgaatatacaattttcgttggtaagatcttataaattaacttaaaagcttatttatt 48816846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 7292779 - 7292852
Alignment:
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||||||||||||| |||||||||| |  |||||||||  |||||||||  ||||||||| ||| ||||    
T  7292779 cttaggaattaacataaaaacttatttatttgcgtaagttatttatcataagctaaaaaataagcaaattcaaa 7292852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 30199037 - 30199000
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataag 269  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  30199037 ttatgcaaataaataagtttttatgtgttattcataag 30199000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 317
Target Start/End: Original strand, 52021248 - 52021337
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtg-tcaaaacaacttatgaagatacaattttc 317  Q
    |||||||||||||||| | | |||||||| ||||||||||| || || |||| |||| ||   |||||| |||||||||||| |||||||    
T  52021248 agcttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattttc 52021337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 5129896 - 5129856
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagctt 272  Q
    ||||||||||||| ||||||| |||| ||||||||||||||    
T  5129896 ttatgcaaataaataagttttaatgtattattcataagctt 5129856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 32901170 - 32901078
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||||||||||| ||||||| || |||  ||||||    |||| |||||| | |||||||| | ||||| |||| |||||||||||    
T  32901170 aaaacaacttatgaagataaaattttcgttagtgagaacttatattttaatataaaaacatatttatttgcataagctatttttcataagctc 32901078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 5e-36; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 28625482 - 28625654
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| ||||| || |||||||||||||| || |||| |||| ||  |||||| |||||||||||||||||||| || |||  ||    
T  28625482 agcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaa 28625581  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | || ||||||||||||||||||||||||| | |||||||||| ||||||||||  ||||||||||||| ||||    
T  28625582 cctatgaattaacataaaagcttatttatttgcataagttatttttcataagct-aaaaataagccaattcaaa 28625654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 40697003 - 40697181
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtc-----aaaacaacttatgaagatacaattttcattggt 323  Q
    |||||||||||||||| |||||||||||| ||||| |||||||| || ||||  ||| ||       |||||| |||||||||||||||||||  ||  |    
T  40697003 agcttatgcaaataaataagtttttatgtattatttataagcttgtcaaggtattttatgaagaaaaaaaacagcttatgaagatacaatttttgttcct 40697102  T
Q  324 gcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | ||||||| ||||||||||||||||||||||||| | ||||| |||| ||||||||||| ||||||||||||||||||    
T  40697103 gaaaacttatgaattaacataaaagcttatttatttgtataagctatttttcataagctcaaaaataagccaatccaaa 40697181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 41059873 - 41059700
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||| ||| ||| |||||||| |||||||||||||| || |||| |||| ||  ||| || ||||||||||| |||||||| || |||  ||    
T  41059873 agcttatgcaaacaaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattttcgttagtgagaa 41059774  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| ||||||||||||||||||||||||| | ||||  | || ||||||||||| |||||||||| |||||||    
T  41059773 cttatgaattaacataaaagcttatttatttgcataaactgtttttcataagctcaaaaataagcccatccaaa 41059700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 232 - 398
Target Start/End: Complemental strand, 29922270 - 29922104
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    ||||||||||||| |||||||||||| |||||||||||||| || |||| |||| ||  || ||| |||||| | ||||||||||  || |||  | |||    
T  29922270 ttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgcatatacaattttttttagtgagagctt 29922171  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    | ||||||| ||||||||||||||||| | ||||| |||| ||||||| ||| ||||||||||||||    
T  29922170 atgaattaatataaaagcttatttatttgcataagctatttttcataaactcaaaaataagccaatc 29922104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 232 - 403
Target Start/End: Original strand, 12467269 - 12467444
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaa-caacttatgaagatacaattttcattggtgcaaact 330  Q
    ||||||||||||| ||| |||||||| |||||||||||||| || |||| |||| ||  |||| || |||||||||| ||||||||  || |||  ||||    
T  12467269 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagagacaatttttgttagtgagaact 12467368  T
Q  331 taagaatta---acataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaa 403  Q
    || ||||||   ||||||||||||||||||| | |||||||||| ||||||| ||  |||||||||||||||||||    
T  12467369 tatgaattactaacataaaagcttatttatttgcataagttatttttcataacctaaaaaataagccaatccaaaa 12467444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 40452562 - 40452388
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaatttt-cattggtgcaa 327  Q
    ||||||||||||  || ||| |||||||  |||||||||||||| || |||| |||| ||   ||||| |||||||||||| |||||| | || |||  |    
T  40452562 agcttatgcaaaggaataagcttttatgcattattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgaga 40452463  T
Q  328 acttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||| |||| ||||||| |||||||||||| | ||||| |||| ||||||||||| ||||||||||||||||||    
T  40452462 acttatgaataaacataatagcttatttatttgcataagctatttttcataagctcaaaaataagccaatccaaa 40452388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 1868848 - 1869016
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||| |||| |||||| ||| |||||||| ||||||| |||||| || |||| |||| ||  ||| ||||||||||||||||||||||| || |||  ||    
T  1868848 agctcatgctaataaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgttagtgagaa 1868947  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | ||  ||||||||||||||     ||||| | ||||| |||| ||||||||||||||||||||||||||||||    
T  1868948 cgtatcaattaacataaaag-----ttatttgcataagctatttttcataagctcgaaaataagccaatccaaa 1869016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 231 - 358
Target Start/End: Complemental strand, 13060684 - 13060557
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||| |||||||| || ||||||||||| || |||| |||| ||  |||||| ||||||||| ||| |||||| || |||  ||||    
T  13060684 cttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttcgttagtgagaact 13060585  T
Q  331 taagaattaacataaaagcttatttatt 358  Q
    || |||||||||||||||||||||||||    
T  13060584 tatgaattaacataaaagcttatttatt 13060557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 1576633 - 1576806
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||| ||||||||| ||  |||||||| || ||||||||||| || | || |||| ||  |||||||||| |||||||||||||||  || |||  ||    
T  1576633 agcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgttagtgagaa 1576731  T
Q  329 cttaagaattaacataaaagcttatttattagaataag-ttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||||||||   |||||||| | ||||| | ||| ||||||||||| ||||||||||||||||||    
T  1576732 cttaagaattaacataaaactgtatttatttgcataagctaatttttcataagctcaaaaataagccaatccaaa 1576806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 1608182 - 1608009
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||| ||||||||| ||  |||||||| || ||||||||||| || | || |||| ||  |||||||||| |||||||||||||||  || |||  ||    
T  1608182 agcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgttagtgagaa 1608084  T
Q  329 cttaagaattaacataaaagcttatttattagaataag-ttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||||||||   |||||||| | ||||| | ||| ||||||||||| ||||||||||||||||||    
T  1608083 cttaagaattaacataaaactgtatttatttgcataagctaatttttcataagctcaaaaataagccaatccaaa 1608009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 304 - 402
Target Start/End: Complemental strand, 11163291 - 11163193
Alignment:
Q  304 aagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||| || |||| |||||| ||||||||||||||||||||||||| | | ||||| ||| |||| ||||| ||||||||||||||||||    
T  11163291 aagatacaattttcgttagtgcgaacttatgaattaacataaaagcttatttatttgtaaaagttgttcatcattagctcaaaaataagccaatccaaa 11163193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 233 - 413
Target Start/End: Complemental strand, 11912182 - 11912002
Alignment:
Q  233 tatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactta 332  Q
    ||||| |||||| ||| |||||||| || ||||||| ||| || | || |||||||  |||| | |||||||||||||||||||  || |||  ||||||    
T  11912182 tatgctaataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgagaactta 11912083  T
Q  333 agaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaaaagcccttag 413  Q
     |||||||||| |||||||||||||| |   ||| |||| |||||||||||| ||||||||| ||| ||| | ||||||||    
T  11912082 tgaattaacatgaaagcttatttatttgctcaagatatttttcataagctcgtaaataagcctatcaaaacaggcccttag 11912002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 229 - 356
Target Start/End: Original strand, 42852024 - 42852150
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    ||||||| |||||||| ||| |||||||| |||||||||||||| || || | |||| ||  |||||||||||| || ||||||||||| || |||  ||    
T  42852024 agcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaacaacttat-aaaatacaattttcgttagtgagaa 42852122  T
Q  329 cttaagaattaacataaaagcttattta 356  Q
    |||| |||||||||||||||||||||||    
T  42852123 cttatgaattaacataaaagcttattta 42852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 24030217 - 24030390
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    ||||||| |||||||| ||| |||||||| |||||||||||||| || | || |||| ||  |||||| |||  || |||||||||||| || |||  ||    
T  24030217 agcttatccaaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaaca-cttgcgaggatacaattttcgttagtgagaa 24030315  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagct-cgaaaataagccaatccaaa 402  Q
    |||| ||||||||||||||||||||||||| | ||||| |||| || |||||||   ||||||||| ||||||||    
T  24030316 cttatgaattaacataaaagcttatttatttgcataagctatttttaataagctaaaaaaataagctaatccaaa 24030390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 35536844 - 35537019
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcat---aagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgc 325  Q
    |||||||||||||| | ||| |||||||| ||||||||   |||||| || || | |||| ||  |||||| |||||||||||||||||||| ||  ||     
T  35536844 agcttatgcaaatacataagcttttatgtgttattcatcataagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgttactga 35536943  T
Q  326 aaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
     |||||| |||| || ||||||||||||||||| | ||||| |||| ||||||| ||| |||||||| |||||||||    
T  35536944 gaacttatgaat-aatataaaagcttatttatttgcataagctatttttcataatctcaaaaataagtcaatccaaa 35537019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 299 - 400
Target Start/End: Original strand, 1943067 - 1943168
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    |||||||||||||||||||||| |||  |||||| |||||| |||||||||||||||||| | |||||  ||| ||| ||||||| ||||||||| ||||    
T  1943067 ttatgaagatacaattttcattagtgagaacttatgaattagcataaaagcttatttatttgcataagccatttttcgtaagctcaaaaataagcaaatc 1943166  T
Q  399 ca 400  Q
    ||    
T  1943167 ca 1943168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 231 - 358
Target Start/End: Original strand, 17657246 - 17657373
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||| |||||||| ||||||||||||||  |   || |||| ||  |||||| ||||||||||||| |||||| || |||  ||||    
T  17657246 cttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaact 17657345  T
Q  331 taagaattaacataaaagcttatttatt 358  Q
    || ||||||||||||||| |||||||||    
T  17657346 tatgaattaacataaaaggttatttatt 17657373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 2878760 - 2878587
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||| | ||||||||||| || || | ||||||| ||  | ||||  ||| ||||||||||||||  || ||| |||    
T  2878760 agcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagttta-gaagatacaatttttgttagtgaaaa 2878662  T
Q  329 cttaagaattaacataaaagcttatttattagaataagtta-ttcttcataagctcgaaaataagccaatccaaa 402  Q
    |||   ||||||||||||||||||||||||   ||||| || || ||||||||||  ||||||||||||||||||    
T  2878661 cttttaaattaacataaaagcttatttatttacataagctattttttcataagctaaaaaataagccaatccaaa 2878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 298 - 399
Target Start/End: Complemental strand, 5559934 - 5559833
Alignment:
Q  298 cttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaat 397  Q
    |||||||||||||||||||| || |||  || ||| ||||| ||||||||||||||||||| | ||||| |||| ||||  ||||| |||||||||||||    
T  5559934 cttatgaagatacaattttcgttagtgagaatttatgaatttacataaaagcttatttatttgcataagctatttttcacgagctcaaaaataagccaat 5559835  T
Q  398 cc 399  Q
    ||    
T  5559834 cc 5559833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 13739336 - 13739404
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||| |||||||||||||||||| | |||||||||| ||||||| ||| ||||||||||||||||||    
T  13739336 gaattatcataaaagcttatttatttgcataagttatttttcataaactcaaaaataagccaatccaaa 13739404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 358
Target Start/End: Original strand, 41419509 - 41419632
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    ||||||| ||||| ||||||||   | |||||||||||||| || |||| |||| ||  |||||| |||||||||||||||||||| || |||  |||||    
T  41419509 ttatgcatataaataagttttt---tattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaactt 41419605  T
Q  332 aagaattaacataaaagcttatttatt 358  Q
    |  ||||||||||||| ||||||||||    
T  41419606 atcaattaacataaaaacttatttatt 41419632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 232 - 323
Target Start/End: Original strand, 41534628 - 41534719
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggt 323  Q
    ||||||||||||| ||| |||||||| |||||||||||||| || |||| ||||  |  |||||| |||||||||||||||||||| |||||    
T  41534628 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgttggt 41534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 306 - 402
Target Start/End: Complemental strand, 10537234 - 10537137
Alignment:
Q  306 gatacaattttcattggtgcaaacttaagaattaacataaaa-gcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||| || |||  |||||| |||||||||||||| |||||| |||| | ||||| |||| ||||||| ||| ||||||||||||||||||    
T  10537234 gatacaattttcgttagtgagaacttatgaattaacataaaaagcttatatatttgcataagctatttttcataaactcaaaaataagccaatccaaa 10537137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 377
Target Start/End: Complemental strand, 13625605 - 13625456
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtg-tcaaaacaacttatgaagatacaattttcattggtgcaa 327  Q
    |||||||||||||||| | | |||||| | |||||||||||||| |  |||| |||| || | |||||| ||||| |||||| ||||||| || ||| ||    
T  13625605 agcttatgcaaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgttagtgaaa 13625506  T
Q  328 acttaagaattaacataaaagcttatttattagaataagttattcttcat 377  Q
    |||||  |||||| ||||||| ||||||||| | ||||| |||| |||||    
T  13625505 acttataaattaatataaaagtttatttatttgcataagctatttttcat 13625456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 39154775 - 39154672
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    |||||||||| ||||||| |||  ||  |||||| ||||||||| ||||||||||||||| | ||||| |||| |||| ||| || | ||||||||||||    
T  39154775 ttatgaagatgcaatttttattattgagaacttatgaattaacacaaaagcttatttatttgcataagctatttttcagaagttcaataataagccaatc 39154676  T
Q  399 caaa 402  Q
    ||||    
T  39154675 caaa 39154672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 402
Target Start/End: Original strand, 41125774 - 41125849
Alignment:
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||| |||||||||||||||||||| |||| | | ||| |||| ||||||| ||| ||||||||||||||||||    
T  41125774 aacttatgaattaacataaaagcttatatatttgcaaaagctatttttcataaactcaaaaataagccaatccaaa 41125849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 1473360 - 1473445
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaatttt 316  Q
    |||||||||||||| ||| |||||||| |||||||||||||| || || |  ||| ||  |||||| |||||||||||||||||||    
T  1473360 cttatgcaaataaataagcttttatgtattattcataagcttgtcaagttaatttatgaaaaaacagcttatgaagatacaatttt 1473445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 22202020 - 22201842
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgt----gtcaaaacaacttatgaagatacaattttcattggtg 324  Q
    |||||||| ||||||| ||| |||||||| |||||||||||||| || |||| |||| |    |  |||| | ||| |||||||||||||||| || | |    
T  22202020 agcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaggaaaaaaaagcttgtgaagatacaattttcgttagcg 22201921  T
Q  325 -caaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
      ||| ||| ||| |||||||||| |||||||||| | ||||  |||| ||||||||||  ||||||||| ||||||||    
T  22201920 agaaagttatgaaataacataaaaacttatttatttgtataaactatttttcataagctaaaaaataagcaaatccaaa 22201842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 29136846 - 29136781
Alignment:
Q  293 aacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    |||| |||||||||||||||||| | ||||||   ||||| |||||||||||||||||||||||||    
T  29136846 aacagcttatgaagatacaatttccgttggtgaggacttatgaattaacataaaagcttatttatt 29136781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 42558693 - 42558628
Alignment:
Q  337 ttaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| ||||||||||||||||| | ||||| |||| ||||||||||| ||||||||||||| ||||    
T  42558693 ttaaaataaaagcttatttatttgcataagctatttttcataagctcaaaaataagccaattcaaa 42558628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 231 - 358
Target Start/End: Complemental strand, 12987096 - 12986966
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||| |||||||| || ||||||||||| || |||| |||| ||  ||||||  |||||||| ||| |||||  || |||  ||||    
T  12987096 cttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagttaccatttttgttagtgagaact 12986997  T
Q  331 taaga---attaacataaaagcttatttatt 358  Q
    || ||   |||||||||||||||||||||||    
T  12986996 tatgaattattaacataaaagcttatttatt 12986966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 326 - 402
Target Start/End: Complemental strand, 17868191 - 17868115
Alignment:
Q  326 aaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||  |||||||||||||| ||||||||| | ||||| |||| | ||||||||  ||||||||||||||||||    
T  17868191 aaacttatcaattaacataaaaggttatttatttgcataagctattttccataagctaaaaaataagccaatccaaa 17868115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 402
Target Start/End: Original strand, 29659132 - 29659235
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc-caat 397  Q
    |||||||  ||||||||||||| |||  |||||| ||||||| |||||| |||||||||| | ||||| | || ||||||||||| ||||||||| ||||    
T  29659132 ttatgaaagtacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataagctctttttcataagctc-aaaataagctcaat 29659230  T
Q  398 ccaaa 402  Q
    |||||    
T  29659231 ccaaa 29659235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 6150856 - 6150966
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    |||||| |||||||| ||||||||||  ||  ||  |||||| |||||||||||||| ||||  |||| | |||||||||| ||||||||||| |||| |    
T  6150856 aaaacagcttatgaatatacaatttttgttactgagaacttacgaattaacataaaa-cttagctatttgcataagttatttttcataagctcaaaaaga 6150954  T
Q  391 agccaatccaaa 402  Q
    ||| ||||||||    
T  6150955 agcaaatccaaa 6150966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 327 - 402
Target Start/End: Original strand, 35083339 - 35083414
Alignment:
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||| ||||||||||||||||||||||||| | ||||  ||||  |||||| ||| ||||||| ||||||||||    
T  35083339 aacttatgaattaacataaaagcttatttatttgcataaactatttatcataaactcaaaaataaaccaatccaaa 35083414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 7364330 - 7364264
Alignment:
Q  292 aaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    |||||||||||||||||||||| ||  || |||  |||||| ||||||| |||||||||||||||||    
T  7364330 aaacaacttatgaagatacaatatttgttagtgagaacttatgaattaatataaaagcttatttatt 7364264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 261 - 393
Target Start/End: Complemental strand, 2577481 - 2577348
Alignment:
Q  261 attcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaatttt-cattggtgcaaacttaagaattaacataaaagcttatttatta 359  Q
    |||||||||||| || ||||  ||| ||  |||||||||| | || |||||||||| | || |||  |||||| |||||||||||| |  |||||||||     
T  2577481 attcataagcttgtcaaggtaatttatgaaaaaacaacttgtaaaaatacaatttttcgttagtgagaacttatgaattaacataacaatttatttattt 2577382  T
Q  360 gaataagttattcttcataagctcgaaaataagc 393  Q
    | ||||| |||| ||||||||||| |||||||||    
T  2577381 gcataagctatttttcataagctcaaaaataagc 2577348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 6144740 - 6144912
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||| ||| ||||||| ||| |||||| | ||| |||||||||| || ||||  ||| ||  |||| | |||||||| ||||||||||  || | |  ||    
T  6144740 agctcatgtaaataaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgagaa 6144839  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| ||||||| |||||||||| |||||| | ||||  |||| ||||||||||| ||||||||  ||||||||    
T  6144840 cttatgaattaatataaaagcttgtttatttgcataaactatttttcataagctc-aaaataagtaaatccaaa 6144912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 368
Target Start/End: Original strand, 42478890 - 42478967
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagtt 368  Q
    ||||||||||||||| |||||||||| ||| ||  || |||| ||||||| |||||| |||||||||| | |||||||    
T  42478890 aaaacaacttatgaatatacaatttttatttgtaaaatcttatgaattaatataaaaacttatttatttgcataagtt 42478967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 6125393 - 6125461
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||| ||||||||||||||||| | ||||| |||| |||||||| || |||| ||| |||||||||    
T  6125393 gaattaatataaaagcttatttatttgcataagctatttttcataagttcaaaaagaagtcaatccaaa 6125461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 7984109 - 7984221
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||  |||||||||||| ||||||||||| || || | || ||||| |  ||||||  |||  ||||||||||||||||  |||  ||||    
T  7984109 cttatgcaaataactaagtttttatgtattattcataagtttgtcaaagttgtttgagaaaaaacagtttacaaagatacaattttcataagtgagaact 7984208  T
Q  331 taagaattaacat 343  Q
    || ||||||||||    
T  7984209 tatgaattaacat 7984221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 402
Target Start/End: Original strand, 22573710 - 22573814
Alignment:
Q  299 ttatgaagatacaatttt-cattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaat 397  Q
    ||||||| |||||||||| |||  |||  ||||||  ||||||||| ||| |||||||||| | |||   |||| ||||||||||| |||||||||||||    
T  22573710 ttatgaaaatacaatttttcatctgtggcaacttataaattaacatcaaatcttatttatttgcataccctatttttcataagctcaaaaataagccaat 22573809  T
Q  398 ccaaa 402  Q
    |||||    
T  22573810 ccaaa 22573814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 402
Target Start/End: Original strand, 26003069 - 26003172
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc-caat 397  Q
    ||||||||||||||||||| || |||  | |||   |||||| |||||| ||||||||||   |||||||||| ||||||||||| ||||||||| ||||    
T  26003069 ttatgaagatacaattttcgttagtgagagcttgtaaattaaaataaaaacttatttatttacataagttatttttcataagctc-aaaataagctcaat 26003167  T
Q  398 ccaaa 402  Q
    |||||    
T  26003168 ccaaa 26003172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 402
Target Start/End: Original strand, 27805987 - 27806091
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagtta-ttcttcataagctcgaaaataagccaat 397  Q
    |||| |||||||||||||  || ||| |||||||  |||||||||||||| ||||||||| | ||||| || || || |||||||  ||| |||||||||    
T  27805987 ttataaagatacaatttttgttagtgaaaacttataaattaacataaaagtttatttatttgcataagctattttttaataagctaaaaagtaagccaat 27806086  T
Q  398 ccaaa 402  Q
    |||||    
T  27806087 ccaaa 27806091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 33924761 - 33924693
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||||||||| ||||||||| | |||||||||| |||||||| |  ||||||||  ||||||||    
T  33924761 gaattaacataaaaggttatttatttgcataagttatttttcataagtttaaaaataagttaatccaaa 33924693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 40152898 - 40152787
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    ||||||| ||||||||||| ||||||| ||  ||  |||||| ||||||| ||||||| ||||||||| | ||||| | || |||||||| || ||||||    
T  40152898 aaaacaatttatgaagataaaattttcgttcttgagaacttatgaattaatataaaagattatttatttgcataagatgtttttcataagttc-aaaata 40152800  T
Q  391 agc-caatccaaa 402  Q
    ||| |||||||||    
T  40152799 agctcaatccaaa 40152787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 403
Target Start/End: Complemental strand, 1473386 - 1473323
Alignment:
Q  340 acataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaa 403  Q
    ||||||||||||||||||| | ||||||| ||||  |||||||| |||| |||| |||||||||    
T  1473386 acataaaagcttatttatttgcataagttgttctgtataagctcaaaaagaagcaaatccaaaa 1473323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 402
Target Start/End: Complemental strand, 3520493 - 3520418
Alignment:
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||| ||||||||||||||||||| |  |||| |||| |||||||  |  |||||||| |||||||||    
T  3520493 aacttaagaatttacataaaagcttatttatttgcgtaagctatttttcataatattaaaaataagtcaatccaaa 3520418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 28357213 - 28357272
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    ||||||||||||||||||| ||   | |||||||  ||||||||||||||||||||||||    
T  28357213 ttatgaagatacaattttcgttaacgaaaacttataaattaacataaaagcttatttatt 28357272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 317
Target Start/End: Original strand, 42706798 - 42706888
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgt--gtcaaaacaacttatgaagatacaattttc 317  Q
    |||||||||||||||| ||| ||||| || |||||||||||||| || |||| |||| |     |||||| ||||||||||||||||||||    
T  42706798 agcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttataaaaaaaaacagcttatgaagatacaattttc 42706888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 42852052 - 42851993
Alignment:
Q  340 acataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatcc 399  Q
    ||||||||||||||||||| ||||||| | || | ||||||| | |||||||||||||||    
T  42852052 acataaaagcttatttatttgaataagctgttttgcataagcccaaaaataagccaatcc 42851993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 358
Target Start/End: Complemental strand, 43268650 - 43268591
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    ||||||||||||||||||  || |||  ||||||  ||||||||||||||||||||||||    
T  43268650 ttatgaagatacaatttttgttagtgagaacttataaattaacataaaagcttatttatt 43268591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 391
Target Start/End: Original strand, 589216 - 589317
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacat-aaaagcttatttattagaataagttattcttcataagctcgaaaat 389  Q
    |||| |||||||||||||| || |||   | ||| ||||||| |||||||||| |||| |||||||||| | ||||| |||| || |||||||| |||||    
T  589216 aaaaaaacttatgaagataaaaattttgatagtgaaaacttatgaattaacataaaaaacttatttatttgcataagctattttttataagctcaaaaat 589315  T
Q  390 aa 391  Q
    ||    
T  589316 aa 589317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 402
Target Start/End: Complemental strand, 29418835 - 29418663
Alignment:
Q  230 gcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaac 329  Q
    ||||||||||||||| | || ||||||| ||||| |||||| |    | || |||| ||  ||||||| |||||||| |||||||||| || |||  ||     
T  29418835 gcttatgcaaataaatatgtctttatgtattatttataagcatgctaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaat 29418736  T
Q  330 ttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc-caatccaaa 402  Q
    |||  |||||| |||||| |||||||||| | ||||  | || ||||||||||| ||||||||| |||||||||    
T  29418735 ttataaattaagataaaaacttatttatttgcataaactttttttcataagctc-aaaataagctcaatccaaa 29418663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 41125733 - 41125672
Alignment:
Q  341 cataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||| | |||||| | ||||||| || | ||||||||| ||||||||||||||||||    
T  41125733 cataaaagcctgtttatttgcataagttgttttgcataagctcaaaaataagccaatccaaa 41125672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 356
Target Start/End: Original strand, 43319007 - 43319132
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| | || ||||||| ||||| |||||||| |  | || |||| ||  ||||||  |||||||| || ||||||| || |||  ||||    
T  43319007 cttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataattttcgttagtgagaact 43319106  T
Q  331 taagaattaacataaaagcttattta 356  Q
    || ||||||| |||||| ||||||||    
T  43319107 tatgaattaagataaaaacttattta 43319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 403
Target Start/End: Original strand, 342255 - 342319
Alignment:
Q  340 acataaaagcttatttattagaataagttattcttcataagct-cgaaaataagccaatccaaaa 403  Q
    |||||||||||| |||||| | ||||| |||| ||||||||||   |||||||||||||||||||    
T  342255 acataaaagcttgtttatttgcataagctatttttcataagctaaaaaaataagccaatccaaaa 342319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 1371973 - 1371926
Alignment:
Q  335 aattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||||| |||||||||| | |||||||||| |||||||||||    
T  1371973 aattaacataaaa-cttatttatttgtataagttatttttcataagctc 1371926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 12987070 - 12987142
Alignment:
Q  340 acataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaaaagccctta 412  Q
    ||||||||||||||||||| | ||||||| || | |||||  ||  ||||||||||||||||| | |||||||    
T  12987070 acataaaagcttatttatttgcataagttcttttacataatatcagaaataagccaatccaaacaggccctta 12987142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 13060658 - 13060730
Alignment:
Q  340 acataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaaaagccctta 412  Q
    ||||||||||||||||||| | ||||||| || | |||||  ||  ||||||||||||||||| | |||||||    
T  13060658 acataaaagcttatttatttgcataagttcttttacataatatcagaaataagccaatccaaacaggccctta 13060730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 383
Target Start/End: Complemental strand, 20458572 - 20458488
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||| ||||||||||| |||||   ||||||   ||||| |||||||||||||||||   ||||| |||| |||||||||||    
T  20458572 ttatgaaaatacaattttcgttggtcagaacttatagattaaaataaaagcttatttatttacataagctatttttcataagctc 20458488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 402
Target Start/End: Complemental strand, 29658033 - 29657966
Alignment:
Q  335 aattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagcc-aatccaaa 402  Q
    ||||||||||||||||||||| || | ||||||| || | ||||||||| |||||||||| ||||||||    
T  29658033 aattaacataaaagcttatttttttgcataagttgttttgcataagctc-aaaataagcctaatccaaa 29657966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 33757090 - 33757130
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataag 269  Q
    |||||||||||||||| |||||||||||| ||||| |||||    
T  33757090 agcttatgcaaataaataagtttttatgtattatttataag 33757130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 359
Target Start/End: Original strand, 38498632 - 38498700
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatta 359  Q
    ||||||| |||| |||||| ||||||  || ||| |||||||  |||||| ||||||||||||||||||    
T  38498632 aaaacaatttataaagatataatttttgttagtgaaaacttataaattaaaataaaagcttatttatta 38498700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 43265954 - 43265842
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagct-cgaaaat 389  Q
    |||||| ||||||| |||||||||||| |  |||  ||||||  || |||||||||||||||||||||    |||| ||||  |||||||||   |||||    
T  43265954 aaaacagcttatgaggatacaattttcgtaagtgacaacttacaaaataacataaaagcttatttatttccttaagctatttctcataagctaaaaaaat 43265855  T
Q  390 aagccaatccaaa 402  Q
    |||||||||||||    
T  43265854 aagccaatccaaa 43265842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 8e-32; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 246 - 412
Target Start/End: Complemental strand, 36501582 - 36501416
Alignment:
Q  246 aagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataa 345  Q
    |||||||||||| |||||||||||||| || |||| |||| ||  |||||| |||||||||||| ||||| | || |||  |||| | ||||||||||||    
T  36501582 aagtttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcatgaattaacataa 36501483  T
Q  346 aagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaaaagccctta 412  Q
    ||||||||||||| | ||||| |||| |||| |||||| |||||||||||||||||| | |||||||    
T  36501482 aagcttatttatttgcataagctatttttcacaagctcaaaaataagccaatccaaacaggccctta 36501416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 230 - 395
Target Start/End: Original strand, 4026929 - 4027093
Alignment:
Q  230 gcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaac 329  Q
    ||||||||||||||| ||| |||||||| |||| ||||||||| || |||| |||| ||  |||||| |||||||||||||||||||  || |||  |||    
T  4026929 gcttatgcaaataaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagaac 4027027  T
Q  330 ttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagcca 395  Q
    ||| |||||||||||| |||||||||||| | ||||| |||| ||||||||||  |||||||||||    
T  4027028 ttatgaattaacataatagcttatttatttgcataagctatttttcataagcttaaaaataagcca 4027093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 25836796 - 25836624
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| | | |||||||| |||||||||||||| || |||| |||| ||  |||||  |||||||||| |||||| || || |||  ||    
T  25836796 agcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacggcttatgaagacacaattatcgttagtgagaa 25836697  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||| |||||||||||||||||||| | ||||| |||||||||||||||| |||||||| | |||||||    
T  25836696 cttatgaat-aacataaaagcttatttatttgcataaggtattcttcataagctcaaaaataagtcgatccaaa 25836624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 235 - 402
Target Start/End: Complemental strand, 33321390 - 33321223
Alignment:
Q  235 tgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaag 334  Q
    |||||||||| ||| |||||||| |||||||||||||| || |||| |||| ||  |||||| |||||||||||||||||||  || |||  | |||  |    
T  33321390 tgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtg 33321291  T
Q  335 aattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||| | ||||||||| | ||||| |||| | ||||||||| ||||||||||||||||||    
T  33321290 aattaacataaaggtttatttatttgcataagctattttacataagctcaaaaataagccaatccaaa 33321223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 887414 - 887587
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||| ||| |||||||||||||| || |||| |||| ||| ||| |  ||||||||||||||||||||||| |    ||    
T  887414 agcttatgcaaataaataagcttttttgtattattcataagcttgtcaaggtagtttatgtaaaacctgcttatgaagatacaattttcattagcaagaa 887513  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||||||||||||||||||| |||| | ||||| | || |||| |||||  ||||| ||||||||||||    
T  887514 cttatgaattaacataaaagcttatctatttgcataagctgtttttcaaaagctaaaaaattagccaatccaaa 887587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 231 - 383
Target Start/End: Original strand, 21788461 - 21788613
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||| |||||| | |||||||||||||| |  || | |||| ||  ||||||||||||||||||| ||||||| || |||  | ||    
T  21788461 cttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaaattttcgttagtgagagct 21788560  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    || ||||||| ||||||||||||||||| | |||||||||| |||||||||||    
T  21788561 tatgaattaatataaaagcttatttatttgcataagttatttttcataagctc 21788613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 8832534 - 8832632
Alignment:
Q  304 aagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||| || ||| ||||||| ||||||||||||||||||||||||| | ||||| |||| ||||||||||  |||||||| |||||||||    
T  8832534 aagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagtcaatccaaa 8832632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 398
Target Start/End: Original strand, 38216025 - 38216190
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||    |||||| |||||||||||||| || |||| ||||  |  |||| | | |||||||||||||||||| || |||  ||    
T  38216025 agcttatgcaaataaataa----ttatgtattattcataagcttgtcaaggtagtttaggaaaaaatagcatatgaagatacaattttcgttagtgagaa 38216120  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    |||| || |||||||||||||||||||||| | ||||| |||| ||| ||||||  ||||||||||||||    
T  38216121 cttatgagttaacataaaagcttatttatttgcataagctatttttcgtaagctaaaaaataagccaatc 38216190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 327 - 402
Target Start/End: Original strand, 5903638 - 5903713
Alignment:
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||||| |||||||||||||||||||| | ||||| |||| ||||| ||||| ||||||||||||||||||    
T  5903638 aacttaagaataaacataaaagcttatttatttgcataagctatttttcatgagctcaaaaataagccaatccaaa 5903713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 325 - 402
Target Start/End: Original strand, 37420004 - 37420081
Alignment:
Q  325 caaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| ||| ||||||||||||||||||||||||| | |||| ||||| ||||||||||  ||||||||||||||||||    
T  37420004 caaaattatgaattaacataaaagcttatttatttgcataaattatttttcataagctaaaaaataagccaatccaaa 37420081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 231 - 402
Target Start/End: Original strand, 4004823 - 4004994
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||  ||||||||  ||||||||||||| |  | || |||| ||  || ||||||||||||| |||||||||| || |||  ||||    
T  4004823 cttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgagaact 4004922  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    || ||||||  |||||||||| |||||  | ||||| |||| ||||||| ||| |||||||||  |||||||    
T  4004923 tatgaattactataaaagcttttttatctgcataagctatttttcataaactcaaaaataagcagatccaaa 4004994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 4533386 - 4533497
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    ||||||||| ||||| ||||||||||  || |||  |||||| |||||| |||| ||||||||||||| | ||||| |||| ||||||||||| ||||||    
T  4533386 aaaacaactcatgaatatacaatttttgttagtgacaacttatgaattagcatagaagcttatttatttgcataagctatttttcataagctcaaaaata 4533485  T
Q  391 agccaatccaaa 402  Q
    ||  ||||||||    
T  4533486 agttaatccaaa 4533497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 232 - 402
Target Start/End: Complemental strand, 13056408 - 13056238
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    ||||||||||| | ||| |||||||| || ||||||||||| || |||| |||| |   |||| | ||||||||||| |||||||| ||   |  |||||    
T  13056408 ttatgcaaatagataagcttttatgtatttttcataagcttgtcaaggtagtttataaaaaaatagcttatgaagatgcaattttcgttaacgagaactt 13056309  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | |||||||||| ||||||||| |||| | ||||  |||| || |||||||| | ||||||||||||||||    
T  13056308 atgaattaacattaaagcttatctatttgtataaactatttttgataagctcaacaataagccaatccaaa 13056238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 7480921 - 7480854
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    ||||||||||| |||||||||||||||||| ||   |||||| |||||||||||||| ||||||||||    
T  7480921 aaaacaacttaggaagatacaattttcattagtcagaacttatgaattaacataaaaacttatttatt 7480854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 402
Target Start/End: Original strand, 29774749 - 29774920
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||  |||||||  |||||||| || || |  |||| |||| ||  |||||  |||||||| ||||||||||| || |||  ||||    
T  29774749 cttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaattttcgttagtgagaact 29774848  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    || |||||||| |||||||||||||||| |  |||  |||| ||| | ||||| |||||||| |||||||||    
T  29774849 tatgaattaacgtaaaagcttatttatttgcttaaactatttttcgttagctcaaaaataagtcaatccaaa 29774920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 356
Target Start/End: Complemental strand, 42839404 - 42839278
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||| | ||||| |||||||||||| ||||||||||| || || || | |||| ||  ||| || ||||||||||| |||||||| || | | |||    
T  42839404 agcttatgtagataaataagtttttatgtattattcataagtttgtcaagttagtttatga-aaaccagcttatgaagatgcaattttcgttagagaaaa 42839306  T
Q  329 cttaagaattaacataaaagcttattta 356  Q
    ||||  ||||||||||||||||||||||    
T  42839305 cttatcaattaacataaaagcttattta 42839278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 402
Target Start/End: Original strand, 24007843 - 24007966
Alignment:
Q  277 aggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttca 376  Q
    |||| |||||||  ||||||||||||||  |||||||||| ||| |||  | |||   ||||||||| || |||||||||||  ||||||||||| ||||    
T  24007843 aggtagtttgtgaaaaaacaacttatgagaatacaattttgattagtg--atcttttaaattaacattaatgcttatttattttaataagttatttttca 24007940  T
Q  377 taagctcgaaaataagccaatccaaa 402  Q
    |||| || ||| ||||||||||||||    
T  24007941 taagatcaaaagtaagccaatccaaa 24007966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 341 - 402
Target Start/End: Original strand, 5903729 - 5903790
Alignment:
Q  341 cataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||||||| | ||||| |||| ||||| ||||| ||||||||||||||||||    
T  5903729 cataaaagcttatttatttgcataagctatttttcatgagctcaaaaataagccaatccaaa 5903790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 37409707 - 37409818
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    ||||||| ||||||| ||||||||||  ||  || ||||||   ||||||||||||| |||| ||| | | ||||| |||| ||||||||||| ||||||    
T  37409707 aaaacaatttatgaaaatacaatttttgttattgaaaacttcgaaattaacataaaatcttagttacttgtataagctatttttcataagctcaaaaata 37409806  T
Q  391 agccaatccaaa 402  Q
    ||||| ||||||    
T  37409807 agccagtccaaa 37409818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 229 - 380
Target Start/End: Complemental strand, 38471875 - 38471724
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| | | |||||||| ||||  ||||||||||  | || |||| ||  ||||||  |||||||| |||||||||| || |||  ||    
T  38471875 agcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaa 38471776  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataag 380  Q
    |||| ||||||| |||| |  ||||||||| | ||||||| || ||||||||    
T  38471775 cttatgaattaagataacaatttatttatttgtataagttctttttcataag 38471724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 45163907 - 45163800
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    ||||||||||| ||||||||||| || ||| |||  |||||| ||||| |||| |||||||||||||  | ||||| |||| |||||| |||| ||| ||    
T  45163907 aaaacaacttaggaagatacaatatttatttgtgggaacttatgaattgacatgaaagcttatttatctgcataagctatttttcatatgctcaaaagta 45163808  T
Q  391 agccaatc 398  Q
    || |||||    
T  45163807 agtcaatc 45163800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 38471847 - 38471917
Alignment:
Q  340 acataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaaaagccct 410  Q
    |||||||||| |||||||| | ||||| | || | ||||||||||||||||||| |||||||| |||||||    
T  38471847 acataaaagcatatttatttgcataagctgttttgcataagctcgaaaataagctaatccaaacaagccct 38471917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 755690 - 755609
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaaaagcccttagtc 415  Q
    |||||||||||||||||| |||||| | ||||| |||| ||||||||||| || ||||| | ||||||| | ||||| ||||    
T  755690 gaattaacataaaagcttctttatttgcataagctatttttcataagctcaaagataagtcgatccaaacaggccctaagtc 755609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 12238567 - 12238397
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| |||  || |||| ||||| |||||||| |  |||| |||| ||   ||| |||||||||| ||||||||||| || ||   |     
T  12238567 agcttatgcaaataaataagcattaatgtattatttataagcttgttaaggtagtttatg---aaaaaacttatgaacatacaattttcgttagtaagat 12238471  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc-caatccaaa 402  Q
    |||| ||||||||||||| ||||| |||||   |||| || || ||||||||||| ||||||||| |||||||||    
T  12238470 cttatgaattaacataaatgcttaattattttcataatttttttttcataagctc-aaaataagctcaatccaaa 12238397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 43787884 - 43787800
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaatttt 316  Q
    |||| |||||||| ||  |||||||| |||||||||| ||| | ||||| | || ||  ||||||||||||||||||||||||||    
T  43787884 ttatacaaataaataaacttttatgtattattcataaacttgtttaggtagcttatgaaaaaacaacttatgaagatacaatttt 43787800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 44475526 - 44475474
Alignment:
Q  306 gatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    ||||||||||||||| |||  |||||| |||||||||||||| ||||||||||    
T  44475526 gatacaattttcattagtgagaacttacgaattaacataaaaacttatttatt 44475474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 386
Target Start/End: Original strand, 19683644 - 19683731
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaa 386  Q
    ||||||||||||||||||  || ||  |||||||  |||||| |||||| ||||| ||||   |||||||||| ||||||||||||||    
T  19683644 ttatgaagatacaatttttgttagtaaaaacttataaattaaaataaaaccttatctatttacataagttatttttcataagctcgaa 19683731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 367
Target Start/End: Complemental strand, 29133748 - 29133613
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    ||||||||||||| ||  |||||||| ||||||||||| || ||   ||||||||||  ||||||  |||| |||||||||||||| ||  || ||||||    
T  29133748 ttatgcaaataaataatcttttatgtattattcataagtttgtcactgtggtttgtggaaaaacagtttataaagatacaattttcgttaatgaaaactt 29133649  T
Q  332 aagaattaacataaaagcttatttattagaataagt 367  Q
    |  |||| ||| ||||  ||||||||| | ||||||    
T  29133648 ataaattgacacaaaaatttatttatttgcataagt 29133613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 35235169 - 35235236
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    ||||| ||||| ||||| |||||| || ||||||  |||||| |||||||||||||| ||||||||||    
T  35235169 aaaaccacttacgaagacacaattatcgttggtgagaacttatgaattaacataaaatcttatttatt 35235236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 383
Target Start/End: Original strand, 11776986 - 11777140
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||| ||||| ||| |||||||| ||||| |||||||| |  || | |||| ||  || ||| |||||||||||||| ||||  || |||  ||    
T  11776986 agcttatgcatataaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaagatacactttttgttagtgagaa 11777085  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||  || |||||||||| |||||||||| | | ||| |||| || ||||||||    
T  11777086 cttataaactaacataaaaccttatttatttgcagaagctatttttaataagctc 11777140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 12442904 - 12442977
Alignment:
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||||||| |||||||||||||||  | ||||| | || ||||||||||| ||| ||||| ||||||||    
T  12442904 cttatgaattaacttaaaagcttatttatctgcataagctgtttttcataagctcaaaattaagctaatccaaa 12442977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 17546488 - 17546597
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    ||||||||||||||| |||  |||||| || ||| |||||||  || ||||||||||  |||||||||   |||| ||||| |||| ||| || ||||||    
T  17546488 aaaacaacttatgaatatatcattttcgttagtgaaaacttataaactaacataaaaatttatttatttacataaattatttttcacaagttcaaaaata 17546587  T
Q  391 agccaatcca 400  Q
    || |||||||    
T  17546588 agtcaatcca 17546597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 38010694 - 38010582
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaag--cttatttattagaataagttattcttcataagctcgaaaa 388  Q
    |||| ||||||| | |||| ||||||  || ||| ||||||| ||||||||| ||||   |||||||||| | ||||| |||| ||||||||||| || |    
T  38010694 aaaaaaacttattatgatataatttttgttagtgaaaacttatgaattaacaaaaaaaaacttatttatttgtataagctatttttcataagctcaaaga 38010595  T
Q  389 taagccaatccaa 401  Q
    |||| ||||||||    
T  38010594 taagacaatccaa 38010582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 383
Target Start/End: Original strand, 446499 - 446583
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||||||||||| || |||  | ||||  |||||| ||||||||||| |||||   |||| ||||| |||||||||||    
T  446499 ttatgaagatacaattttcgttagtgagagcttataaattaaaataaaagcttacttatttacataaattatttttcataagctc 446583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 12683687 - 12683647
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagctt 272  Q
    ||||||||||||| ||||||| |||| ||||||||||||||    
T  12683687 ttatgcaaataaataagttttaatgtattattcataagctt 12683647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 12950137 - 12950045
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||||||| ||| ||||||| || ||   | |||| ||||||||||||||||||| ||||| | ||| | | || |||||||||||    
T  12950137 aaaacaacttatgaatatagaattttcgttagtaagatcttatgaattaacataaaagcttaattatttgcatatgctctttttcataagctc 12950045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 383
Target Start/End: Complemental strand, 22898371 - 22898287
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||| ||||||||||| || ||  |||||||   ||||| |||||||||||||||||   ||||| |||| |||||||||||    
T  22898371 ttatgaaaatacaattttcgttagtcaaaacttatagattaaaataaaagcttatttatttacataagctatttttcataagctc 22898287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 34913474 - 34913434
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataag 269  Q
    |||||||||||||||| ||| |||||||| |||||||||||    
T  34913474 agcttatgcaaataaataagcttttatgtattattcataag 34913434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 40301354 - 40301394
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataag 269  Q
    |||||||||||||||| |||||||||||| ||||| |||||    
T  40301354 agcttatgcaaataaataagtttttatgtattatttataag 40301394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 229 - 398
Target Start/End: Original strand, 32975689 - 32975858
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||| | |||||||||||||| || |||| |||| ||  || |||||||||||||||||||||||  || |||  ||    
T  32975689 agcttatgcaaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgagaa 32975788  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    |||| ||||||| ||||||||||||||||| | ||||| |||| ||||||||||| |||| ||| |||||    
T  32975789 cttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaaaaacaagacaatc 32975858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 34286647 - 34286475
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||| ||||||| ||| |||||||| |||||||||||||| || |||| |||||||  |||||| |||||||||||||||||||| || | |  ||    
T  34286647 agcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtga-aaaacagcttatgaagatacaattttcgttagggagaa 34286549  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| ||||||| ||||||||||||||||| | ||||  |||| ||||||||||| |||||||| |||| ||||    
T  34286548 cttatgaattaatataaaagcttatttatttgcataacctatttttcataagctcaaaaataagtcaattcaaa 34286475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 229 - 390
Target Start/End: Original strand, 32131442 - 32131603
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||||  |||||| |||| || || |||| |||| ||   ||||||| ||||||||||||||||||| | |||  ||    
T  32131442 agcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaataaacaacctatgaagatacaattttcaatagtgagaa 32131541  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    |||| |||||||||||||||||||| |||| | ||||  |||| ||||||||||| ||||||    
T  32131542 cttatgaattaacataaaagcttatctatttgcataaactatttttcataagctcaaaaata 32131603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 28879060 - 28879230
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaa- 327  Q
    |||||||||||||||| ||| |||||||| |||||||||||||| || |||| |||| ||  | ||||||||||||||||     |||  || ||| ||     
T  28879060 agcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaagat-----ttttgttagtgaaag 28879154  T
Q  328 -acttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
     ||||| ||||||||||||||||||||||||| | ||||| |||| ||||||||||  |||||||| |||||||||    
T  28879155 aacttatgaattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagtcaatccaaa 28879230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 232 - 402
Target Start/End: Complemental strand, 10299007 - 10298838
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    |||||||||||||  |  |||| ||| | |||||||||||| || |||| |||| ||  |||||| |||||||||||||||||||  ||  ||  |||||    
T  10299007 ttatgcaaataaattaacttttttgtatcattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgagaactt 10298908  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | ||||||||||||||||| || |||| | ||||| |||| ||||||||||| ||||||||||||||||||    
T  10298907 atgaattaacataaaagct-atctatttgcataagctattattcataagctcaaaaataagccaatccaaa 10298838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 10213759 - 10213870
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    |||||| |||||||||| ||||||||  || |||  |||||| ||||||||||| ||||||||||||| | ||||| |||| ||||||||||| ||||||    
T  10213759 aaaacagcttatgaagaaacaatttttgttagtgagaacttatgaattaacatacaagcttatttatttgcataagctatttttcataagctcaaaaata 10213858  T
Q  391 agccaatccaaa 402  Q
    | ||||||||||    
T  10213859 atccaatccaaa 10213870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 382
Target Start/End: Complemental strand, 9131212 - 9131059
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||| | ||| |||||||| ||||| |||||||| || |  | |||| ||   ||||| |||||||||||||||||||| || ||   ||    
T  9131212 agcttatgcaaatatataagcttttatgtattatttataagcttgtcgatttagtttctgaagaaacagcttatgaagatacaattttcgttagtcggaa 9131113  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagct 382  Q
    |||| ||||||||||||||| ||||||||| | ||||| |||| ||||||||||    
T  9131112 cttatgaattaacataaaagtttatttatttgcataagctatttttcataagct 9131059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 32924296 - 32924141
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    ||||||||| |||||| | | |||||| | ||||| |||||||| | || || |||| ||  ||||||||||||||||||| ||||||| || ||| |||    
T  32924296 agcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatgaagataaaattttc-ttagtgaaaa 32924198  T
Q  329 cttaagaattaacataaaagcttattta--ttagaataagttattcttcataagctc 383  Q
    |||| ||||||| |||||||||||||||  || | ||||| ||||||||||||||||    
T  32924197 cttatgaattaatataaaagcttatttatttttgcataagctattcttcataagctc 32924141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 25465869 - 25465781
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataa 379  Q
    ||||||||||||||||||||||||||  ||  || ||||||| ||||||||||||||||||||||||| | ||||| |||| |||||||    
T  25465869 aaaacaacttatgaagatacaatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataa 25465781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 296 - 379
Target Start/End: Complemental strand, 25333718 - 25333635
Alignment:
Q  296 aacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataa 379  Q
    |||||||||||||||||||||| || ||| ||||||| |||||||||||||||||||||||||   ||||| |||| |||||||    
T  25333718 aacttatgaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttacataagctatttttcataa 25333635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 232 - 402
Target Start/End: Complemental strand, 24350600 - 24350430
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    ||||||||||||  ||| |||||| | |||||||||||||| || | ||  ||| ||  |||| | |||||||||||| ||||||| || ||   |||||    
T  24350600 ttatgcaaataattaagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagtaagaactt 24350501  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    | |||||||||||||| |||||||||| | ||||| || | ||||||||||| |||||||| || ||||||    
T  24350500 atgaattaacataaaatcttatttatttgcataagctagttttcataagctcaaaaataagtcattccaaa 24350430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 235 - 402
Target Start/End: Complemental strand, 16972435 - 16972267
Alignment:
Q  235 tgcaaataaaaaagtttttatgttttattcataagcttctcta-ggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaa 333  Q
    |||||||||| ||| || ||||| ||||||||||| || |||| ||| |||  ||  |||||| |||||||||||||||||||| || |||  ||||||     
T  16972435 tgcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaattttcgttagtgataacttat 16972336  T
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| || ||||||| ||||||||| | ||||| |||| |  |||||||| ||| |||| |||||||||    
T  16972335 gaatcaatataaaagtttatttatttgcataagctattttgaataagctcaaaattaagtcaatccaaa 16972267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 402
Target Start/End: Complemental strand, 32213025 - 32212926
Alignment:
Q  303 gaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||| |||||||||||| |||  ||||||  || ||||||||||||||||||||| | ||||| |||| |||||||||   ||||||||||||||||||    
T  32213025 gaagacacaattttcattagtgagaacttataaaataacataaaagcttatttatttgcataagctatttttcataagcaaaaaaataagccaatccaaa 32212926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 383
Target Start/End: Original strand, 2669650 - 2669804
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| | | |||| ||||| ||||| || |  |||| |||| ||  ||||||||||||||| ||||| |||||||| ||   |     
T  2669650 agcttatgcaaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacatttttcattagtaggat 2669749  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    |||| |||||||||||||||||||||||||   ||||| | || |||||||||||    
T  2669750 cttatgaattaacataaaagcttatttattttcataagctctttttcataagctc 2669804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 8752870 - 8752972
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttattta-ttagaataagttattcttcataagctcgaaaat 389  Q
    |||||| |||| |||||||||| |||  || |||  |||||| ||||||||||||||||||||||| ||| | ||||||||| ||||||||||| |||||    
T  8752870 aaaacagcttaagaagatacaaattttgtttgtgagaacttatgaattaacataaaagcttatttatttacattaagttatttttcataagctcaaaaat 8752969  T
Q  390 aag 392  Q
    |||    
T  8752970 aag 8752972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 393
Target Start/End: Original strand, 11988202 - 11988361
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    ||||||||||||| |||||||||||| ||||| ||||| || |  |||| |||  ||  |||||   ||||||||||||||||||| || |||  | |||    
T  11988202 ttatgcaaataaataagtttttatgtattatttataagttttta-aggtagttcatgaaaaaaccgtttatgaagatacaattttcgttagtgagagctt 11988300  T
Q  332 aagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc 393  Q
    |  |||||| |||||||| ||||||||   |||||||||| ||||||||||| |||||||||    
T  11988301 ataaattaaaataaaagcatatttatttacataagttatttttcataagctc-aaaataagc 11988361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 9131038 - 9130972
Alignment:
Q  292 aaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttatt 358  Q
    ||||||| |||||||||||||||||| || ||   |||||| ||||||||||||||| |||||||||    
T  9131038 aaacaacctatgaagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttatt 9130972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 402
Target Start/End: Complemental strand, 25671904 - 25671802
Alignment:
Q  297 acttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaa 396  Q
    ||||||||||||||||||  | || ||| |||||||  ||||||||||||||||||||||||   ||||| |||| ||||||| ||   |||||||||||    
T  25671904 acttatgaagatacaatt--cgttagtgaaaacttataaattaacataaaagcttatttatttacataagctatttttcataa-cttataaataagccaa 25671808  T
Q  397 tccaaa 402  Q
    ||||||    
T  25671807 tccaaa 25671802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 393
Target Start/End: Original strand, 35055494 - 35055586
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc 393  Q
    ||||||||||||||||||| || |||  | |||| ||||||| |||||||||||||||||   ||||| |||| ||||||||||| |||||||||    
T  35055494 ttatgaagatacaattttcgttagtgagagcttatgaattaa-ataaaagcttatttatttacataagctatttttcataagctc-aaaataagc 35055586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 383
Target Start/End: Original strand, 38895661 - 38895815
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||| ||| ||  |||||| | |||||||||||||| |  |||| |||| ||  |||| || ||||||||||||||| ||  || ||| |||    
T  38895661 agcttatgcaaaaaaataaacttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttagtgaaaa 38895760  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||  |||||| |||||| |||||||||| | ||||  || | |||||||||||    
T  38895761 cttataaattaatataaaaacttatttatttgtataaactaattttcataagctc 38895815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 13131553 - 13131618
Alignment:
Q  337 ttaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||||||||||| | ||| | |||| ||||||||||  |||||||| |||||||||    
T  13131553 ttaacataaaagcttatttatttgcatatgctatttttcataagcttaaaaataagtcaatccaaa 13131618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 229 - 398
Target Start/End: Original strand, 35453412 - 35453579
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||||| ||||||||||| || || |||| |||| ||  |||||| |||||||    ||||||||||||   |  ||    
T  35453412 agcttatgcaaataaataagcttttatgtattattcataagtttatcaaggtagtttatgaaaaaacagcttatga----acaattttcattatcgagaa 35453507  T
Q  329 cttaagaattaacataaaagcttatttattagaataag---ttattcttcataagctcgaaaataagccaatc 398  Q
    |||| |||||||||| |||||||| || || | |||||   ||||| |||||| |||| |||| |||||||||    
T  35453508 cttatgaattaacat-aaagcttacttttttgcataagctattatttttcatatgctcaaaaagaagccaatc 35453579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 42363400 - 42363272
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| |||||||||||| ||||| ||||| || |  |||| |||| ||  |||||   ||||||||||||||||||  || |||  ||    
T  42363400 agcttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaaccgtttatgaagatacaatttttgttagtgagaa 42363302  T
Q  329 cttaagaattaacataaaagcttatttatt 358  Q
    |||   |||||| |||||||||||||||||    
T  42363301 cttttaaattaaaataaaagcttatttatt 42363272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 393
Target Start/End: Original strand, 42102109 - 42102271
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| |||||||||||| ||||| ||||| || |  |||| |||| ||  |||||   | ||||||||||||||||| ||  ||  |     
T  42102109 agcttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaaccgttaatgaagatacaattttcgttaatgagag 42102207  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc 393  Q
     |||  |||||| |||||||||||||||||   ||||| |||| ||||||||||| |||||||||    
T  42102208 gttataaattaaaataaaagcttatttatttacataagctatttttcataagctc-aaaataagc 42102271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 32213106 - 32213063
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagctt 272  Q
    |||||||||||||||| ||| |||||||| ||||||||||||||    
T  32213106 agcttatgcaaataaataagcttttatgtattattcataagctt 32213063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 35168504 - 35168437
Alignment:
Q  250 ttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttc 317  Q
    |||||||| |||||||||||||| || |||| |||| ||  ||||||  |||||||||||||||||||    
T  35168504 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattttc 35168437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 41145482 - 41145326
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttatt---cataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgc 325  Q
    |||||||||||||||| ||| |||||| | |||||   |||||| || |  |||| |||| ||  |||||||||| | ||||||| ||||||||| |||     
T  41145482 agcttatgcaaataaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaacaactt-taaagatacgattttcattagtga 41145384  T
Q  326 aaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
     |||||| ||||||| ||| || |||||||||| | ||||  |||| |||||||||||    
T  41145383 gaacttatgaattaatatataaacttatttatttgcataaactatttttcataagctc 41145326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 381
Target Start/End: Original strand, 30974053 - 30974143
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagc 381  Q
    |||||||||||||||  |||||||||| || ||   | |||| |||||| |||||||||||||||||| | ||||| | || |||||||||    
T  30974053 aaaacaacttatgaatttacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttcataagc 30974143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 402
Target Start/End: Complemental strand, 10480070 - 10480029
Alignment:
Q  361 aataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||| |||| ||||||||||| ||||||||||||||||||    
T  10480070 aataagctatttttcataagctcaaaaataagccaatccaaa 10480029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 24087249 - 24087346
Alignment:
Q  305 agatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||| |||||| ||  || |||||||  |||||| ||||||||||||||||| | ||||| |||| |||||   ||| |||||||| |||||||||    
T  24087249 agataccattttcgttaatgaaaacttataaattaaaataaaagcttatttatttgcataagctatttttcattcactcaaaaataagtcaatccaaa 24087346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 25333754 - 25333713
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaactta 332  Q
    ||||||||||||||||||||||||||| || ||| |||||||    
T  25333754 aaaacaacttatgaagatacaattttcgttagtgaaaactta 25333713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 32131469 - 32131408
Alignment:
Q  341 cataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||||||| | ||||| | || | ||||||||| |||||||| |||||||||    
T  32131469 cataaaagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaatccaaa 32131408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 383
Target Start/End: Complemental strand, 45548164 - 45548076
Alignment:
Q  294 acaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    |||||||| ||||||| ||||||||||  |  ||||||| || |||| ||||||||||||||||| | | ||| |||| |||||||||||    
T  45548164 acaacttaggaagataaaattttcattaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctc 45548076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 1089018 - 1089058
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagctt 272  Q
    ||||||||||||| ||||||| |||| ||||||||||||||    
T  1089018 ttatgcaaataaataagttttaatgtattattcataagctt 1089058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 2563422 - 2563514
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    |||||||||| |||| |||||||||| ||| ||   | |||| |||||||||||||||| || ||||| | ||||| | || |||||||||||    
T  2563422 aaaacaacttttgaatatacaatttttattagtaagatcttatgaattaacataaaagcataattatttgtataagctctttttcataagctc 2563514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 13265489 - 13265529
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagctt 272  Q
    ||||||||||||| ||| |||||||| ||||||||||||||    
T  13265489 ttatgcaaataaataagcttttatgtattattcataagctt 13265529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 19925621 - 19925713
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||| ||||||||||||||||||| || |||  | ||||  |||||| |||||  ||||||||||   ||||| |||| |||||||||||    
T  19925621 aaaacaatttatgaagatacaattttcgttagtgagagcttacaaattaaaataaatacttatttatttacataagctatttttcataagctc 19925713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 24866973 - 24866862
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    |||||| ||||||||| |||||||||| ||   |  ||||||  |||||| |||||| |||||||||| | ||||| | || ||||||||||| ||||||    
T  24866973 aaaacagcttatgaaggtacaattttcgttatcgagaacttataaattaagataaaaacttatttatttgcataagctctttttcataagctc-aaaata 24866875  T
Q  391 agc-caatccaaa 402  Q
    ||| |||||||||    
T  24866874 agctcaatccaaa 24866862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 383
Target Start/End: Original strand, 29713285 - 29713333
Alignment:
Q  335 aattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    |||||| |||||||||||||||||   |||||||||| |||||||||||    
T  29713285 aattaaaataaaagcttatttatttacataagttatttttcataagctc 29713333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 34338397 - 34338341
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttattt 355  Q
    ||||||||||||||||||| || ||  |||||||   ||||||||||||||||||||    
T  34338397 ttatgaagatacaattttcgttagttaaaacttatagattaacataaaagcttattt 34338341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 231 - 383
Target Start/End: Complemental strand, 32675971 - 32675819
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||| |||||| | |||||||||||||||   |||| |||| ||  |||| ||||||||||||||||||||||||| |||  ||||    
T  32675971 cttatgcaaataaataagcttttatttattattcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgagaact 32675872  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    || ||||||| |||||| |||||||||| | |||||||||| |||||||||||    
T  32675871 tatgaattaatataaaaacttatttatttgcataagttatttttcataagctc 32675819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 230 - 402
Target Start/End: Original strand, 7267778 - 7267957
Alignment:
Q  230 gcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa- 328  Q
    ||||||||||| ||| ||| |||||||| ||||||||||||||  | |||| |||| ||  |||||||||||||||| ||||||||||  |||||  ||     
T  7267778 gcttatgcaaacaaataagcttttatgtattattcataagcttgccaaggtagtttatgaaaaaacaacttatgaaggtacaattttcgctggtgagaag 7267877  T
Q  329 ------cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
          |||| ||||||||||||||||||||||||| | ||||||| || ||||||||||  ||||||||||||||||||    
T  7267878 tgagaacttacgaattaacataaaagcttatttatttgcataagttgttattcataagcttaaaaataagccaatccaaa 7267957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 9202421 - 9202310
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    |||||| | ||||||||||||||||| ||| |||  |||||| ||||||||||||||||||||||||||  ||||| |||| ||||||||||  ||||||    
T  9202421 aaaacagcatatgaagatacaatttttattagtgataacttatgaattaacataaaagcttatttattaacataagctatttttcataagctaaaaaata 9202322  T
Q  391 agccaatccaaa 402  Q
    ||||||||||||    
T  9202321 agccaatccaaa 9202310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 381
Target Start/End: Complemental strand, 21891422 - 21891270
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||||||| || | |||||||||||||| || | || |||| ||  | ||||||||||||||||| ||||||| || |    ||    
T  21891422 agcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaataacaacttatgaagatagaattttcgttcgcaagaa 21891323  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagc 381  Q
    |||| ||||||||||||||||||||| ||| | ||||| |||| |||||||||    
T  21891322 cttatgaattaacataaaagcttattcattcgcataagctatttttcataagc 21891270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 229 - 388
Target Start/End: Complemental strand, 2034313 - 2034154
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||||| ||||| ||||| || || |||| |||| ||  |||||||||||  |||||||||||||| |  ||   ||    
T  2034313 agcttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattttcgtaagtaataa 2034214  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaa 388  Q
    |||| || | |||||||||||||||||||| | ||||| ||||  |||||||||||||||    
T  2034213 cttatgattcaacataaaagcttatttatttgcataagctatttatcataagctcgaaaa 2034154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 229 - 398
Target Start/End: Original strand, 10687309 - 10687480
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgt---tttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgc 325  Q
    |||||||||||||||| ||| ||| ||||   ||||||||||||| | |  |||| |||| ||| ||||||||||||| ||||||||||||| || | |     
T  10687309 agcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgtaaaaacaacttatggagatacaattttcgttagcga 10687408  T
Q  326 aaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
     |||||| ||| | ||||||||||||||||||| | ||||  |||| ||||||||||  ||||||||||||||    
T  10687409 gaacttatgaactgacataaaagcttatttatttgcataaactatt-ttcataagctaaaaaataagccaatc 10687480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 10873988 - 10874115
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||| ||||| ||| |||||| ||  ||| |||||||| |  |||| |||| ||  |||||| |||||||||||||||||||  |||||| |||    
T  10873988 agcttatgcatataaataagcttttatatt--attaataagcttgttaaggtagtttatgagaaaacagcttatgaagatacaattttagttggtgaaaa 10874085  T
Q  329 cttaagaattaacataaaagcttatttatt 358  Q
    |||| |||||||||||||||||||||||||    
T  10874086 cttatgaattaacataaaagcttatttatt 10874115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 403
Target Start/End: Complemental strand, 10755364 - 10755193
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| ||||| || |||||||||||||| || ||||   || ||  |||| | ||||||||   ||||||||| || ||   ||    
T  10755364 agcttatgcaaataaataagcttttacgtattattcataagcttgtcaaggtaacttatgaaaaaatagcttatgaa---acaattttcgttagtaagaa 10755268  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaa 403  Q
    |||| ||||||||||||||||||||||||| | ||||  |||| |||| |||||| |||||||| ||||||||||    
T  10755267 cttatgaattaacataaaagcttatttatttgcataaactatttttcagaagctcaaaaataagtcaatccaaaa 10755193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 298 - 402
Target Start/End: Complemental strand, 35071443 - 35071339
Alignment:
Q  298 cttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaat 397  Q
    ||||||||||| |||| ||  || |||  |||||| ||||||||||||||||||||||||| | ||||| |||| ||||||||||  |||||||||||||    
T  35071443 cttatgaagatgcaatgtttttttgtgagaacttatgaattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagccaat 35071344  T
Q  398 ccaaa 402  Q
    |||||    
T  35071343 ccaaa 35071339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 8014790 - 8014963
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||  ||| ||||||   |||||||||||||| || |||| |||| ||  |||||  | |||||||||||||||||  || ||| |||    
T  8014790 agcttatgcaaataagtaagcttttattcattattcataagcttgtcaaggtagtttatgaaaaaactgcatatgaagatacaattttggttagtgaaaa 8014889  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    || |  |||||||||||||||||||| ||| | ||| | |||| ||||||||||  || |||||| ||||||||    
T  8014890 ctgataaattaacataaaagcttattaatttgcatatgctatttttcataagcttaaatataagcaaatccaaa 8014963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 231 - 383
Target Start/End: Original strand, 23239251 - 23239403
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    ||||| |||||||| ||| |||||| | |||||||||||||| |  | ||||||| |   ||| ||| |||||| ||||||| |||| || |||  ||||    
T  23239251 cttatacaaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaagcaaattatgacgatacaactttccttagtgagaact 23239350  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    || ||||||| ||||||||||||||||| | ||||| |||| |||||||||||    
T  23239351 tatgaattaatataaaagcttatttatttgcataagctatttttcataagctc 23239403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 231 - 412
Target Start/End: Original strand, 2255738 - 2255920
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    ||||||||||||||  || |||||||| | |||||||||||| |  ||||  ||| ||  |||||| |||||||||||||||||||   | |||  |||     
T  2255738 cttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatacaatttttggtagtgagaaca 2255837  T
Q  331 taagaattaacataaaagcttatttattagaataagtta-ttcttcataagctcgaaaataagc-caatccaaaaaagccctta 412  Q
    || |||||||||||||||||||||||||   |||||||| || || |||||||| ||||||||| |||||||||  ||||||||    
T  2255838 tatgaattaacataaaagcttatttatttacataagttatttttttataagctc-aaaataagctcaatccaaacgagccctta 2255920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 293 - 399
Target Start/End: Complemental strand, 7446882 - 7446777
Alignment:
Q  293 aacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataag 392  Q
    ||||||||||||||||||||||||  ||||   ||||||| | ||||||||| | ||||||||||| | |||  ||||| ||||||||||| ||||||||    
T  7446882 aacaacttatgaagatacaatttttgttggcaaaaacttatggattaacatata-gcttatttatttgcatagcttatttttcataagctcaaaaataag 7446784  T
Q  393 ccaatcc 399  Q
    |||||||    
T  7446783 ccaatcc 7446777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 229 - 401
Target Start/End: Complemental strand, 2027260 - 2027089
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||||  ||||||| ||| || || ||   |||| ||  |||||| ||||||||||||||| |||  || ||   ||    
T  2027260 agcttatgcaaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttagtaagaa 2027161  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaa 401  Q
    |||| ||||||||||||||| |||| |||| | ||||| |||| ||||||||||  |||||||| ||||||||    
T  2027160 cttatgaattaacataaaagtttatctatttgcataagctatttttcataagct-aaaaataagtcaatccaa 2027089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 6752885 - 6752968
Alignment:
Q  300 tatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||||||||||||| |||   | ||| ||||||| ||||||||||||||||| | ||||| |||| |||||||||||    
T  6752885 tatgaagatacaattttcattagtgaggatttatgaattaatataaaagcttatttatttgcataagctatttttcataagctc 6752968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 9764405 - 9764302
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    |||| |||||||||||||| ||  || | |||||  |||||||||||||||||||||||| | |||| ||||| |||||||| || |||||||| ||||     
T  9764405 ttattaagatacaattttcgttaatgaacacttataaattaacataaaagcttatttatttgcataaattatttttcataagttcaaaaataagtcaatg 9764306  T
Q  399 caaa 402  Q
    ||||    
T  9764305 caaa 9764302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 231 - 396
Target Start/End: Complemental strand, 1240693 - 1240527
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaa-caacttatgaagatacaattttcattggtgcaaac 329  Q
    ||||| |||||||| ||| |||||||| |||||||||||||| || ||||  |||  |  |||| |||||||||||||||| ||||||||| |||  ||     
T  1240693 cttattcaaataaataagcttttatgtattattcataagcttgtcaaggtaatttacgaaaaaaacaacttatgaagatacgattttcattagtgagaat 1240594  T
Q  330 ttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaa 396  Q
    ||| | ||||| ||||||  |||||  || | | ||| |||| ||||||||||| ||||||||||||    
T  1240593 ttatgtattaaaataaaaatttattactttgcaaaagctatttttcataagctcaaaaataagccaa 1240527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 252 - 402
Target Start/End: Original strand, 6958649 - 6958798
Alignment:
Q  252 ttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagctt 351  Q
    |||||| | ||||||||||||||| |||| |||||||  ||| || ||| |||||||||||||||| || |||  || |||  |||||  ||||||||||    
T  6958649 ttatgtatcattcataagcttctcaaggtagtttgtgaaaaagcagcttgtgaagatacaattttctttagtgagaagttataaattagtataaaagctt 6958748  T
Q  352 atttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||  | ||||| |||| ||||||| ||  |||||||| |||||||||    
T  6958749 atttatgtgcataagctatt-ttcataaactaaaaaataagacaatccaaa 6958798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 402
Target Start/End: Complemental strand, 9201734 - 9201632
Alignment:
Q  300 tatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatcc 399  Q
    |||||| ||||||||| | || |||  |||||| ||||||||||||||||||||||||| | |||||  ||| | ||||||||  ||||||||||||| |    
T  9201734 tatgaaaatacaatttccgttagtgagaacttatgaattaacataaaagcttatttatttgcataagcgattttccataagctaaaaaataagccaattc 9201635  T
Q  400 aaa 402  Q
    |||    
T  9201634 aaa 9201632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 401
Target Start/End: Original strand, 20776462 - 20776528
Alignment:
Q  335 aattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaa 401  Q
    ||||| |||||||| ||||||||| | |||||||||| |||||| |||| |||||||||||||||||    
T  20776462 aattatcataaaagtttatttatttgcataagttatttttcatatgctcaaaaataagccaatccaa 20776528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 24625976 - 24626050
Alignment:
Q  328 acttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||| |||||||||| ||| ||||||| |||| ||||  |||| ||||||||||||||||||||| ||||||||    
T  24625976 acttatgaattaacatgaaaacttatttgttagcataaactatttttcataagctcgaaaataagcaaatccaaa 24626050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 382
Target Start/End: Original strand, 6776810 - 6776963
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||| |  ||| ||||||||| |  |||| |||| ||  |||| ||||||||||||||||| ||||||| |||  ||    
T  6776810 agcttatgcaaataaataagcttttatttaatatccataagcttgttaaggtagtttatggaaaaataacttatgaagatacaaatttcattagtgagaa 6776909  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagct 382  Q
    || |    |||| |||||| |||||||||| | ||||| |||| ||||||||||    
T  6776910 ctgatactttaatataaaaacttatttatttgcataagctatttttcataagct 6776963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 12816880 - 12816812
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||||||||||||||||||| | ||||  |||| ||||||||||| ||||||||  ||||||||    
T  12816880 gaattaacataaaagcttatttatttgcataaactatttttcataagctcaaaaataagttaatccaaa 12816812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 7576875 - 7576772
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    ||||||||||| ||||||| ||| |   ||||||  ||||||||||||| |||||||||| | |||| ||| | |||||||| ||||||||||| ||||     
T  7576875 ttatgaagatataattttcgttgataagaacttattaattaacataaaaacttatttatttgtataaattaattttcataagttcgaaaataagtcaatt 7576776  T
Q  399 caaa 402  Q
    ||||    
T  7576775 caaa 7576772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 10054383 - 10054510
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||||| ||||||||||| || |  | || |||| ||  |||| || ||||  |||||||||||||||| |||  ||    
T  10054383 agcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaaataatttat--agatacaattttcattagtgggaa 10054480  T
Q  329 cttaagaattaacataaaagcttatttatt 358  Q
    ||||  ||||| ||||||||| ||||||||    
T  10054481 cttacaaattagcataaaagcctatttatt 10054510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 10184413 - 10184260
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||| ||||||| |||||||||| | ||||| ||||| || |  |||| |||| ||  ||||||| ||||||||| ||||||||| || ||   |     
T  10184413 agcttatgtaaataaataagtttttatctattatttataagttttta-aggtagtttatgaaaaaacaatttatgaagaaacaattttcgttagtaagag 10184315  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||  |||||| |||||||||||||||||   ||||| |||| |||||||||||    
T  10184314 cttataaattaaaataaaagcttatttatttatataagctatttttcataagctc 10184260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 32615498 - 32615345
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| |||||||||||| ||||| ||||  || |  |||| |||  ||  ||||| | ||||||||||||||||||| || |||  |     
T  32615498 agcttatgcaaataaataagtttttatgtattatttataaattttta-aggtagttgatgaaaaaactatttatgaagatacaattttcgttagtgagag 32615400  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    | ||  |||||| ||||||||||| |||||   |||||||||| |||||||||||    
T  32615399 catataaattaaaataaaagcttacttatttacataagttatttttcataagctc 32615345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 402
Target Start/End: Original strand, 6758631 - 6758803
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||| |||| | | |||| ||||||||| |  |||| |||| ||  |||  ||||||| ||||||||| |||| || |||  ||||    
T  6758631 cttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaagatacaaatttcgttagtgagaact 6758730  T
Q  331 taagaattaacataaaa-gcttatttattagaataagttattcttcataagctcgaaaataagc-caatccaaa 402  Q
    || ||||||| |||||| ||||||||||| | ||||| |||| |||| |||||  ||||||||| |||||||||    
T  6758731 tatgaattaatataaaaagcttatttatttgcataagctatttttcagaagct-taaaataagctcaatccaaa 6758803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 2040203 - 2040111
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||| |||| ||| ||||||||||||| ||   ||||||  |||||| |||||| |||||||||| | |||||||||| ||||| |||||    
T  2040203 aaaacaatttataaagttacaattttcattagttagaacttataaattaatataaaaacttatttatttgcataagttatttttcatgagctc 2040111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 29623499 - 29623389
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaata 390  Q
    ||||||||||||||| ||| | ||||| || |||  |||||| |||||||||| ||| |||||||||| | ||||| |||| ||||||| ||| ||||||    
T  29623499 aaaacaacttatgaaaataaagttttcgttagtgagaacttatgaattaacat-aaatcttatttatttgcataagctatttttcataaactc-aaaata 29623402  T
Q  391 agc-caatccaaa 402  Q
    ||| |||||||||    
T  29623401 agctcaatccaaa 29623389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 402
Target Start/End: Complemental strand, 21025197 - 21025130
Alignment:
Q  335 aattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||||||||||||||||||||| | ||||| |||| || |||||||  |||||||  |||||||||    
T  21025197 aattaacataaaagcttatttatttgcataagctatttttgataagctaaaaaataaatcaatccaaa 21025130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 10658296 - 10658366
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaaaa 404  Q
    ||||||| ||||||||||||||||| | || | ||||| ||||||| ||| |||||||| |||| ||||||    
T  10658296 gaattaatataaaagcttatttatttgcattaattatttttcataaactcaaaaataagacaattcaaaaa 10658366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 371
Target Start/End: Complemental strand, 3211018 - 3210931
Alignment:
Q  291 aaaacaacttatgaagatacaattttcatt-------ggtgcaaacttaagaattaacataaaagcttatttattagaataagttatt 371  Q
    |||||| |||||||||||||||||||||||       | ||  |||||| ||||||||||||||||||||||||| | ||||| ||||    
T  3211018 aaaacagcttatgaagatacaattttcattaatgagagctgagaacttatgaattaacataaaagcttatttatttgcataagctatt 3210931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 23239275 - 23239234
Alignment:
Q  342 ataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||||||||| | |||||||||| |||||||||||    
T  23239275 ataaaagcttatttatttgtataagttatttttcataagctc 23239234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 12817110 - 12817050
Alignment:
Q  311 aattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttatt 371  Q
    |||||||||| ||| |||| ||  |||||||||||||||||||||||| | ||||| ||||    
T  12817110 aattttcattagtgaaaacatataaattaacataaaagcttatttatttgcataagctatt 12817050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 21025311 - 21025227
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaat 313  Q
    |||||||||||||||| ||| |||||||| |||| ||||||||| |  |||| |||| ||  |||| | | ||||||||||||||    
T  21025311 agcttatgcaaataaataagcttttatgtattatgcataagcttgttaaggtagtttatgaaaaaagagcctatgaagatacaat 21025227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 30533982 - 30534022
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataag 269  Q
    |||||||||||||||| ||| |||||||| |||||||||||    
T  30533982 agcttatgcaaataaataagcttttatgtattattcataag 30534022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 383
Target Start/End: Complemental strand, 32165275 - 32165191
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||||||||||| || |||  | ||||  |||||| |||||| ||||||||||   ||||| |||| |||||||||||    
T  32165275 ttatgaagatacaattttcgttagtgagagcttataaattaaaataaaaacttatttatttacataagctatttttcataagctc 32165191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 7e-29; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 29378647 - 29378820
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||||| ||||| || || || || |||| |||| ||  |||||| |||||||||||||||||||| || ||   ||    
T  29378647 agcttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaa 29378746  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| |||||||| |||||||||||||||| | ||||| |||| ||||||| ||| |||||||| |||||||||    
T  29378747 cttatgaattaacgtaaaagcttatttatttgcataagctatttttcataaactcaaaaataagtcaatccaaa 29378820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 232 - 402
Target Start/End: Original strand, 20888578 - 20888749
Alignment:
Q  232 ttatgcaaataaaaaag-tttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||    |||| |||| ||  ||||||| ||||||||||||||||||| |  ||| |||||    
T  20888578 ttatgcaaataaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaattttcttccgtgaaaact 20888677  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||  ||||||||||||| |||| ||||| | |||||||||| ||||||||||| ||||||||  ||||||||    
T  20888678 tataaattaacataaaaacttacttatttgcataagttatttttcataagctcaaaaataagtaaatccaaa 20888749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 298 - 412
Target Start/End: Complemental strand, 33288090 - 33287976
Alignment:
Q  298 cttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaat 397  Q
    |||||||||||||| ||||| || ||| ||||||| |||||||||||||| |||||||||| | ||||| || | ||||||||||| |||||||||||||    
T  33288090 cttatgaagatacagttttcgttagtgaaaacttatgaattaacataaaaacttatttatttggataagctagttttcataagctcaaaaataagccaat 33287991  T
Q  398 ccaaaaaagccctta 412  Q
    ||||| |||||||||    
T  33287990 ccaaacaagccctta 33287976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 231 - 402
Target Start/End: Complemental strand, 29390632 - 29390462
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||  ||| |||| |||||||||||||| |  |||| |||| ||  ||||||||||||||||||||||||||| || |    || |    
T  29390632 cttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatga-aaaacaacttatgaagatacaattttcgttagctagaatt 29390534  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    || ||||||||||||||||||||||||| | ||||  |||| ||||||||||| |||||||| |||||||||    
T  29390533 tatgaattaacataaaagcttatttatttgcataaactatttttcataagctcaaaaataagtcaatccaaa 29390462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 229 - 383
Target Start/End: Complemental strand, 44613557 - 44613403
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| |||||| | |||||||||||||| |  |||| |||| ||  |||||||||||||| ||||||||||| |||  |   ||    
T  44613557 agcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacgatacaatttttattaattagaa 44613458  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    |||| ||||||| ||||||||||||||||| | ||||| |||| |||||||||||    
T  44613457 cttatgaattaatataaaagcttatttatttgcataagctatttttcataagctc 44613403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 47511045 - 47511220
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcatt--ggtgca 326  Q
    |||||||||||||||| ||| |||||||| |||||||||||||| |  |||  || | ||  |||||| |||||||||||||||||||||||  ||||      
T  47511045 agcttatgcaaataaataagcttttatgtattattcataagcttgttaaggaagtctatgaaaaaacagcttatgaagatacaattttcattggggtgag 47511144  T
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||| ||||||||||||||  |||||||   | ||||| |||| ||||||| ||| ||||||| ||||||||||    
T  47511145 aacttatgaattaacataaaaaattatttaactgcataagctatttttcataacctcaaaaataaaccaatccaaa 47511220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 231 - 358
Target Start/End: Original strand, 30181554 - 30181681
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||| ||||||||| ||| |||||||| |||||||||||||| || |||| |||| |   |||||| |||||||||||||  |||||||| |||  ||||    
T  30181554 cttaggcaaataaagaagcttttatgtattattcataagcttgtcaaggtagtttatcaaaaaacagcttatgaagatactgttttcattagtgggaact 30181653  T
Q  331 taagaattaacataaaagcttatttatt 358  Q
    || |||||||||||||||||||||||||    
T  30181654 tatgaattaacataaaagcttatttatt 30181681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 231 - 402
Target Start/End: Original strand, 34922935 - 34923108
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaa--caacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||| ||| |||||||| ||||||||||| || || |||| |||| |   ||||  || ||| |||||||||| ||||| || |||  ||    
T  34922935 cttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaaaaacagcttgtgaagatacacttttcgttagtgagaa 34923034  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| ||| ||||||||||||||||||||| | ||||| |||| || |||||||| ||||||||||||| ||||    
T  34923035 cttatgaactaacataaaagcttatttatttgcataagctattttttataagctcaaaaataagccaattcaaa 34923108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 38372560 - 38372733
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| | |||||| ||||||||||| || || |||| ||||  |  ||| || || | ||||| ||||||||| || |||  ||    
T  38372560 agcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcagctcaagaagaaacaattttcgttagtgagaa 38372659  T
Q  329 cttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||| ||||||||||||||||| ||||||| | || || |||| ||||||||||| ||||||| ||||||||||    
T  38372660 cttatgaattaacataaaagctgatttatttgcattagctatttttcataagctcaaaaataacccaatccaaa 38372733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 235 - 393
Target Start/End: Complemental strand, 14691378 - 14691219
Alignment:
Q  235 tgcaaataaa-aaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaa 333  Q
    |||||||||| |||| |||||||| |||||||||||||| || | ||  ||| ||  ||||||| ||||||||||| ||||||| || |||  ||||||     
T  14691378 tgcaaataaataaagcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaacttat 14691279  T
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc 393  Q
    ||||||||||||||| ||||||||| | || |  |||| ||||||||||  |||||||||    
T  14691278 gaattaacataaaaggttatttatttgcatgaactatttttcataagctaaaaaataagc 14691219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 299 - 402
Target Start/End: Original strand, 25908366 - 25908469
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    ||||||||||||||||||| || ||| ||| |||  ||||||||||||| |||||||||| | |||||  ||| ||||||| ||| ||||||||||||||    
T  25908366 ttatgaagatacaattttcgtttgtgaaaagttataaattaacataaaaacttatttatttgcataagccatttttcataacctcaaaaataagccaatc 25908465  T
Q  399 caaa 402  Q
    ||||    
T  25908466 caaa 25908469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 327 - 402
Target Start/End: Original strand, 33204934 - 33205009
Alignment:
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    |||||| ||||||||||||||||||||||||| | ||||| |||| ||||||||||  ||||||||||||||||||    
T  33204934 aacttatgaattaacataaaagcttatttatttgcataagatatttttcataagctaaaaaataagccaatccaaa 33205009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 259 - 403
Target Start/End: Original strand, 39279461 - 39279606
Alignment:
Q  259 ttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgca-aacttaagaattaacataaaagcttatttat 357  Q
    |||||||||||||| |  ||||||||| ||  ||| || |||| ||||||||||||||| ||  |  | ||| || ||||||||||||||||||||||||    
T  39279461 ttattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattttcgttaattgagaacctatgaattaacataaaagcttatttat 39279560  T
Q  358 tagaataagttattcttcataagctcgaaaataagccaatccaaaa 403  Q
    | | ||||| |||| ||||||||||| |||  ||||||||||||||    
T  39279561 ttgtataagctatttttcataagctcaaaatcaagccaatccaaaa 39279606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 231 - 402
Target Start/End: Original strand, 22032766 - 22032937
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| | |||||||||| ||||| |||||| | |  | || |||| ||  ||||||| |||||||| |||||||||| || |||  ||||    
T  22032766 cttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaact 22032865  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc-caatccaaa 402  Q
    ||  |||||| |||||| |||||||||| | ||||| | || ||||||||||| ||||||||| |||||||||    
T  22032866 tataaattaagataaaaacttatttatttgcataagctttttttcataagctc-aaaataagctcaatccaaa 22032937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 234 - 391
Target Start/End: Complemental strand, 32917671 - 32917514
Alignment:
Q  234 atgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaa 333  Q
    ||||||||||| |||||||||||| | |||||||||||| ||   |||||||  |  ||||||||||||||||||| ||||||  || |||  ||||||     
T  32917671 atgcaaataaataagtttttatgtatcattcataagcttatcatagtggtttacgaaaaaacaacttatgaagatataatttttgttagtgagaacttat 32917572  T
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataa 391  Q
     | ||||| ||||||| |||||||| | ||||  |||| || |||||||| |||||||    
T  32917571 aatttaacttaaaagcatatttattggcataacctattttttataagctcaaaaataa 32917514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 46743952 - 46744084
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttatt----cataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtg 324  Q
    |||| ||||||||||| ||| |||||||| |||||    ||||||||| || |||| |||  ||  |||||| | |||||||||||||||||| || |||    
T  46743952 agctcatgcaaataaataagattttatgtattatttatccataagcttgtc-aggtagttaatgaaaaaacagcatatgaagatacaattttcgttagtg 46744050  T
Q  325 caaacttaagaattaacataaaagcttatttatt 358  Q
      |||||| |||||||||||||||||||||||||    
T  46744051 agaacttacgaattaacataaaagcttatttatt 46744084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 401
Target Start/End: Complemental strand, 6406842 - 6406779
Alignment:
Q  338 taacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaa 401  Q
    |||||||||| |||||||||| | |||||||||| ||||||||||| |||||||| ||||||||    
T  6406842 taacataaaatcttatttatttgtataagttatttttcataagctcaaaaataagtcaatccaa 6406779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 291 - 385
Target Start/End: Complemental strand, 37465908 - 37465814
Alignment:
Q  291 aaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcga 385  Q
    |||||||||||| |||||||||| ||  |||| |  |||||| ||||||| ||||||||||||||||| | ||||| || | |||||||||||||    
T  37465908 aaaacaacttattaagatacaatatttgttggcgagaacttatgaattaatataaaagcttatttatttgcataagctaattttcataagctcga 37465814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 41094223 - 41094306
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttc 317  Q
    ||||||||||||| |||  ||||||| ||| |||||||||| || ||||||||| ||  |||| ||||||||||||||||||||||    
T  41094223 ttatgcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatg--aaaaaaacttatgaagatacaattttc 41094306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 356
Target Start/End: Complemental strand, 48021728 - 48021605
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaactt 331  Q
    ||||||||||||| ||| | |||| | |||||||||||||| |  | || |||| ||  |||| |||| |||||||||||||||||||| ||| ||||||    
T  48021728 ttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttatga-aaaataactaatgaagatacaattttcattagtgaaaactt 48021630  T
Q  332 aagaattaacataaaagcttattta 356  Q
    | ||||||| ||||||  |||||||    
T  48021629 atgaattaatataaaaaattattta 48021605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 296 - 402
Target Start/End: Complemental strand, 18765129 - 18765022
Alignment:
Q  296 aacttatgaagatacaattttcattggtgcaaacttaagaattaacat-aaaagcttatttattagaataagttattcttcataagctcgaaaataagcc 394  Q
    |||||||||||||||||||||  || |||  |||||   |||||| || ||||| ||||||||| |  ||||||||| ||||||||||  ||||||||||    
T  18765129 aacttatgaagatacaatttttgttagtgagaacttgcaaattaatataaaaagtttatttatttgcgtaagttatttttcataagctaaaaaataagcc 18765030  T
Q  395 aatccaaa 402  Q
    ||||||||    
T  18765029 aatccaaa 18765022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 40629446 - 40629344
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    |||||||||||| |||||  || |||  |||||| ||||||| ||||| ||||||| ||| |  |||| |||| ||||||||||| ||||||||||||||    
T  40629446 ttatgaagatactatttttgtttgtgagaacttatgaattaatataaatgcttatt-atttgcctaagctatttttcataagctcaaaaataagccaatc 40629348  T
Q  399 caaa 402  Q
    ||||    
T  40629347 caaa 40629344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 44834970 - 44834904
Alignment:
Q  326 aaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataag 392  Q
    |||||||  ||||||||| |||| ||||||||| | |||||||||| |||||||| |||||||||||    
T  44834970 aaacttataaattaacattaaagtttatttatttgcataagttatttttcataagttcgaaaataag 44834904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 387
Target Start/End: Complemental strand, 14676041 - 14675886
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| | || ||||||| ||||| ||||| || |  |||| |||| ||  ||||||  |||||||||||||||||||||| | | || ||    
T  14676041 cttatgcaaataaataggtgtttatgtattatttataagttttta-aggtagtttatgaaaaaacagtttatgaagatacaattttcattagcgaaagct 14675943  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaa 387  Q
    ||  |||||| |||||| ||||||||||    ||||||||| | |||||| ||||||    
T  14675942 tataaattaaaataaaaacttatttatttacgtaagttattttccataaggtcgaaa 14675886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 383
Target Start/End: Complemental strand, 16933011 - 16932860
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    ||||||||| |||| || ||||||||| ||||| ||||| || |  |||| |||| ||  ||||| | ||||||||||||||||||| || ||  || ||    
T  16933011 cttatgcaactaaataaatttttatgtattatttataagttttta-aggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtaaaagct 16932913  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||  |||||| ||||||||||||||||    ||||| |||| |||||||||||    
T  16932912 tataaattaaaataaaagcttatttatatacataagctatttttcataagctc 16932860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 383
Target Start/End: Complemental strand, 16938394 - 16938243
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    ||||||||| |||| || ||||||||| ||||| ||||| || |  |||| |||| ||  ||||| | ||||||||||||||||||| || ||  || ||    
T  16938394 cttatgcaactaaataaatttttatgtattatttataagttttta-aggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtaaaagct 16938296  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||  |||||| ||||||||||||||||    ||||| |||| |||||||||||    
T  16938295 tataaattaaaataaaagcttatttatatacataagctatttttcataagctc 16938243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 17944686 - 17944782
Alignment:
Q  260 tattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttattta 356  Q
    ||||||||||||| || |||| |||| |   |||||||||||||||||||||| || |||| |||  ||||||  |||||||| |||| ||||||||    
T  17944686 tattcataagcttgtcaaggtagtttatagaaaaacaacttatgaagatacaaattacattagtgagaacttataaattaacacaaaaacttattta 17944782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 26331872 - 26331940
Alignment:
Q  334 gaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||||||||||||||||||||| | ||||| |||| |||||||| ||   ||||||||||| ||||    
T  26331872 gaattaacataaaagcttatttatttgcataagctatttttcataagttcattaataagccaatacaaa 26331940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 383
Target Start/End: Complemental strand, 47654428 - 47654344
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    |||||||| |||||||||| || |||  |||||| ||||||| |||||| |||||||||| | ||||| | || |||||||||||    
T  47654428 ttatgaaggtacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataagatctttttcataagctc 47654344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 382
Target Start/End: Complemental strand, 23137177 - 23137094
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagct 382  Q
    |||||||||||||||||||||| |||  | ||||  |||||| ||||||||||| |||||   ||||| |||| ||||||||||    
T  23137177 ttatgaagatacaattttcattagtgagagcttataaattaaaataaaagcttacttatttacataagctatttttcataagct 23137094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 383
Target Start/End: Complemental strand, 43818883 - 43818808
Alignment:
Q  308 tacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||||| |||  |||||| ||||||| |||||| |||||||||| | ||||| | || |||||||||||    
T  43818883 tacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataagctctttttcataagctc 43818808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 393
Target Start/End: Original strand, 991504 - 991664
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||| ||||| |||||||||||  ||||| ||||| || |  |||| |||| ||  ||||| | ||||||||||||| ||||| || |||  |  |    
T  991504 cttatgcacataaataagtttttatgcattatttataagttttta-aggtagtttatgaaaaaaccatttatgaagatacacttttcgttagtgagagtt 991602  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc 393  Q
    ||  |||||| |||||||||||||||||   ||||| |||| ||||||||||| |||||||||    
T  991603 tataaattaaaataaaagcttatttatttacataagctatttttcataagctc-aaaataagc 991664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 1401173 - 1401239
Alignment:
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc 393  Q
    |||||| ||||||||||||||||||||||||| | || |  |||| ||||||||||| ||| |||||    
T  1401173 aacttatgaattaacataaaagcttatttatttgcatgaactatttttcataagctcaaaagtaagc 1401239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 21249160 - 21249198
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataag 269  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  21249160 cttatgcaaataaataagtttttatgtattattcataag 21249198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 18837349 - 18837402
Alignment:
Q  344 aaaagcttatttattagaataagttattcttcataagctcgaaaataagccaat 397  Q
    |||| |||||||||||| ||||| |||  ||||||||||| |||||||||||||    
T  18837349 aaaaacttatttattagcataagctatatttcataagctctaaaataagccaat 18837402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 383
Target Start/End: Original strand, 16958887 - 16958971
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||||||||||| || ||  || ||||  |||||| ||||||||||||||||    ||||| |||| |||||||||||    
T  16958887 ttatgaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctc 16958971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 362 - 402
Target Start/End: Complemental strand, 23119891 - 23119851
Alignment:
Q  362 ataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||| |||||||||||||||| |||||||| |||||||||    
T  23119891 ataagctattcttcataagctcaaaaataagtcaatccaaa 23119851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 392
Target Start/End: Original strand, 32848612 - 32848696
Alignment:
Q  309 acaattttcattggtgcaaacttaagaattaacataaaagcttattta-ttagaataagttattcttcataagctcgaaaataag 392  Q
    |||||||||||| ||  ||| |||  ||||||||||||| |||||||| || | |||||||||| ||||||||||  ||||||||    
T  32848612 acaattttcattagttaaaatttataaattaacataaaaccttatttattttgcataagttatttttcataagctaaaaaataag 32848696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 24747 - 24922
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctcta--ggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgca 326  Q
    |||||||||||||||| ||| |||||||| |||||||||||||| || |  ||| |||| ||  |||||| || || |||||||||| |||||| |||      
T  24747 agcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaatattcattagtgag 24846  T
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatccaaa 402  Q
    ||||||  ||||||||||||| |||||||||| | ||||| || | ||||||||||| |||||||| |||||||||    
T  24847 aacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaaaaataagacaatccaaa 24922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 231 - 402
Target Start/End: Original strand, 1062 - 1233
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||| |||||| | |||| |||||| || |  ||||  ||| ||  |||| ||||||||||||||||| ||||||| |||  ||||    
T  1062 cttatgcaaataaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaagatacaaatttcattagtgagaact 1161  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc-caatccaaa 402  Q
    ||    |||| ||||||||||||||||| | |||||||||| ||||||||||  ||||||||| |||||||||    
T  1162 tatactttaatataaaagcttatttatttgcataagttatttttcataagct-taaaataagctcaatccaaa 1233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 109073 - 108990
Alignment:
Q  232 ttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttc 317  Q
    ||||||||||||| |||  ||||||| ||| |||||||||| || ||||||||| ||  |||| ||||||||||||||||||||||    
T  109073 ttatgcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatg--aaaaaaacttatgaagatacaattttc 108990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 58882 - 58779
Alignment:
Q  299 ttatgaagatacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    ||||||||||||||||| | || ||| |||||||  | ||||||||| ||| |||||||| | ||||| |||| || ||||| |  ||||||||||||||    
T  58882 ttatgaagatacaatttccgttagtgaaaacttataatttaacataatagcatatttatttgcataagctattttttataagtttaaaaataagccaatc 58783  T
Q  399 caaa 402  Q
    ||||    
T  58782 caaa 58779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 402
Target Start/End: Complemental strand, 11382 - 11212
Alignment:
Q  231 cttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaact 330  Q
    |||||||||||||| ||| |||||| | |||| ||| ||||| |  ||||  ||| ||  |||| ||||||||||||||||  ||||||| |||  ||||    
T  11382 cttatgcaaataaataagcttttatttattatccattagcttgttaaggtaatttatggaaaaataacttatgaagatacatatttcattagtgagaact 11283  T
Q  331 taagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagc-caatccaaa 402  Q
    ||    |||| ||||||||||| ||||| | |||||||||| ||||||||||  ||||||||| |||||||||    
T  11282 tatactttaatataaaagctta-ttatttgcataagttatttttcataagct-taaaataagctcaatccaaa 11212  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 89337 - 89294
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagctt 272  Q
    |||||||||||||||||||||||| ||||  |||||||||||||    
T  89337 agcttatgcaaataaaaaagttttaatgtactattcataagctt 89294  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 398
Target Start/End: Complemental strand, 48614 - 48543
Alignment:
Q  327 aacttaagaattaacataaaagcttatttattagaataagttattcttcataagctcgaaaataagccaatc 398  Q
    |||||| ||||||||||||||||||||||||| | ||||| |||| |  |||||||  |||||||| |||||    
T  48614 aacttatgaattaacataaaagcttatttatttgcataagctattttgtataagctaaaaaataagtcaatc 48543  T

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Target: scaffold0512 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 383
Target Start/End: Original strand, 4144 - 4220
Alignment:
Q  307 atacaattttcattggtgcaaacttaagaattaacataaaagcttatttattagaataagttattcttcataagctc 383  Q
    ||||||||||| || |||  ||||||  |||||||||||||||| ||| ||| | ||||| |||| |||||||||||    
T  4144 atacaattttcgttagtgggaacttataaattaacataaaagctcattgatttgcataagctatttttcataagctc 4220  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 43896 - 43844
Alignment:
Q  233 tatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggttt 285  Q
    |||||||||||| |||||||||||| ||||||| |||||| || |||| ||||    
T  43896 tatgcaaataaataagtttttatgtattattcaaaagcttgtcgaggtagttt 43844  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 97290 - 97179
Alignment:
Q  229 agcttatgcaaataaaaaagtttttatgttttattcataagcttctctaggtggtttgtgtcaaaacaacttatgaagatacaattttcattggtgcaaa 328  Q
    |||||||||||||||| ||| | ||||||  ||||||||||||  || |||| |||| ||  |||||| |||||   |||||||||||| || |||  ||    
T  97290 agcttatgcaaataaataagctattatgtagtattcataagctagtcaaggtagtttatgaaaaaacagcttat---gatacaattttcgttagtgagaa 97194  T
Q  329 cttaagaattaacat 343  Q
    |||| ||||||||||    
T  97193 cttatgaattaacat 97179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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