View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0791_low_11 (Length: 556)

Name: NF0791_low_11
Description: NF0791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0791_low_11
NF0791_low_11
[»] chr6 (40 HSPs)
chr6 (175-549)||(12695897-12696282)
chr6 (76-116)||(7977843-7977883)
chr6 (76-116)||(12696330-12696370)
chr6 (76-116)||(16766703-16766743)
chr6 (76-116)||(17435205-17435245)
chr6 (76-116)||(28715301-28715341)
chr6 (30-77)||(4968258-4968305)
chr6 (76-115)||(10770687-10770726)
chr6 (76-115)||(31384927-31384966)
chr6 (76-115)||(34595141-34595180)
chr6 (78-116)||(1532246-1532284)
chr6 (76-114)||(5970121-5970159)
chr6 (76-114)||(6349750-6349788)
chr6 (78-114)||(7569183-7569219)
chr6 (76-116)||(9107383-9107423)
chr6 (76-116)||(17841602-17841642)
chr6 (76-116)||(31959165-31959205)
chr6 (76-115)||(1681765-1681804)
chr6 (76-115)||(6898294-6898333)
chr6 (76-115)||(7801169-7801208)
chr6 (76-115)||(8776986-8777025)
chr6 (76-115)||(9522898-9522937)
chr6 (76-115)||(15489745-15489784)
chr6 (78-113)||(16388248-16388283)
chr6 (76-115)||(16833315-16833354)
chr6 (30-77)||(28902826-28902873)
chr6 (76-114)||(6327531-6327569)
chr6 (78-116)||(7265608-7265646)
chr6 (78-116)||(9025509-9025547)
chr6 (78-116)||(19040358-19040396)
chr6 (76-114)||(25038084-25038122)
chr6 (78-115)||(7151419-7151456)
chr6 (78-115)||(34225824-34225861)
chr6 (76-116)||(1191713-1191753)
chr6 (76-116)||(2224232-2224272)
chr6 (80-116)||(10842538-10842574)
chr6 (78-114)||(17341679-17341715)
chr6 (76-116)||(25010215-25010255)
chr6 (76-116)||(28152105-28152144)
chr6 (78-114)||(31579240-31579276)
[»] chr3 (38 HSPs)
chr3 (30-79)||(33908912-33908961)
chr3 (76-116)||(4987304-4987344)
chr3 (76-116)||(26508116-26508156)
chr3 (76-116)||(28918007-28918047)
chr3 (76-115)||(34910324-34910363)
chr3 (78-116)||(7928456-7928494)
chr3 (78-116)||(25948902-25948940)
chr3 (79-116)||(14979187-14979224)
chr3 (76-113)||(20503474-20503511)
chr3 (76-116)||(1509545-1509585)
chr3 (76-116)||(4990980-4991020)
chr3 (30-78)||(18554414-18554462)
chr3 (76-116)||(21256999-21257039)
chr3 (30-78)||(23702319-23702367)
chr3 (30-78)||(23720775-23720823)
chr3 (30-78)||(23739231-23739279)
chr3 (76-116)||(49651799-49651839)
chr3 (76-116)||(51206366-51206406)
chr3 (81-116)||(3164043-3164078)
chr3 (80-115)||(10954959-10954994)
chr3 (76-115)||(14209120-14209159)
chr3 (77-116)||(21479124-21479163)
chr3 (76-115)||(55401082-55401121)
chr3 (78-116)||(8039850-8039888)
chr3 (76-114)||(10268499-10268537)
chr3 (82-116)||(11155030-11155064)
chr3 (78-116)||(11251984-11252022)
chr3 (76-114)||(15796307-15796345)
chr3 (78-115)||(29508451-29508488)
chr3 (78-114)||(4201404-4201440)
chr3 (79-115)||(9800047-9800083)
chr3 (76-116)||(11610527-11610567)
chr3 (76-116)||(14832105-14832145)
chr3 (78-114)||(16192765-16192801)
chr3 (78-114)||(21211296-21211332)
chr3 (76-116)||(26492218-26492258)
chr3 (76-116)||(34185136-34185176)
chr3 (76-116)||(35994751-35994790)
[»] chr2 (34 HSPs)
chr2 (30-77)||(35593211-35593258)
chr2 (29-78)||(11882237-11882286)
chr2 (76-116)||(21374712-21374752)
chr2 (30-77)||(4969072-4969119)
chr2 (272-383)||(12447568-12447679)
chr2 (76-116)||(30717543-30717583)
chr2 (29-77)||(37393291-37393339)
chr2 (76-116)||(39323270-39323310)
chr2 (76-115)||(18841026-18841065)
chr2 (76-114)||(15972881-15972919)
chr2 (78-116)||(28677915-28677953)
chr2 (76-114)||(30404863-30404901)
chr2 (78-115)||(12668438-12668475)
chr2 (76-116)||(2438732-2438772)
chr2 (76-116)||(11223876-11223916)
chr2 (78-114)||(23921261-23921297)
chr2 (78-114)||(40361769-40361805)
chr2 (76-115)||(12940948-12940987)
chr2 (76-115)||(15657871-15657910)
chr2 (76-115)||(30335424-30335463)
chr2 (78-116)||(21616768-21616806)
chr2 (78-116)||(21782833-21782871)
chr2 (78-116)||(42832291-42832329)
chr2 (77-114)||(1886892-1886929)
chr2 (78-115)||(36756359-36756396)
chr2 (76-113)||(37419752-37419789)
chr2 (76-116)||(4882709-4882749)
chr2 (76-116)||(6940261-6940301)
chr2 (80-112)||(11308021-11308053)
chr2 (76-115)||(19536410-19536450)
chr2 (76-116)||(20539687-20539727)
chr2 (78-114)||(28412358-28412394)
chr2 (76-116)||(37558983-37559023)
chr2 (76-116)||(38117172-38117212)
[»] chr5 (28 HSPs)
chr5 (293-383)||(36072807-36072897)
chr5 (76-116)||(43001806-43001846)
chr5 (76-116)||(21191069-21191109)
chr5 (76-116)||(21576758-21576798)
chr5 (76-116)||(27932241-27932281)
chr5 (76-116)||(39698547-39698587)
chr5 (76-116)||(41633741-41633781)
chr5 (76-115)||(6247629-6247668)
chr5 (76-114)||(24906314-24906352)
chr5 (416-522)||(36072657-36072763)
chr5 (76-116)||(6326310-6326350)
chr5 (76-116)||(8420033-8420073)
chr5 (76-116)||(14674275-14674315)
chr5 (76-116)||(21522756-21522796)
chr5 (76-116)||(21533322-21533362)
chr5 (76-116)||(31084329-31084369)
chr5 (76-116)||(42893366-42893406)
chr5 (80-114)||(4344750-4344784)
chr5 (78-116)||(6471904-6471942)
chr5 (78-116)||(7677711-7677749)
chr5 (76-114)||(13287412-13287450)
chr5 (78-116)||(22013420-22013458)
chr5 (78-116)||(36838549-36838587)
chr5 (78-115)||(40131628-40131665)
chr5 (78-114)||(5467993-5468029)
chr5 (76-116)||(7218280-7218320)
chr5 (78-114)||(28588689-28588725)
chr5 (78-114)||(38749578-38749614)
[»] scaffold0669 (1 HSPs)
scaffold0669 (30-78)||(6861-6909)
[»] chr7 (38 HSPs)
chr7 (30-78)||(19764444-19764492)
chr7 (30-77)||(7306122-7306169)
chr7 (76-116)||(13770697-13770737)
chr7 (76-116)||(21880158-21880198)
chr7 (76-116)||(24339648-24339688)
chr7 (76-116)||(25481908-25481948)
chr7 (76-116)||(26033474-26033514)
chr7 (76-116)||(30813818-30813858)
chr7 (76-115)||(27945048-27945087)
chr7 (78-115)||(18013089-18013126)
chr7 (76-116)||(5409849-5409889)
chr7 (76-116)||(24105684-24105724)
chr7 (76-116)||(28155576-28155616)
chr7 (76-115)||(3991331-3991370)
chr7 (76-115)||(5954254-5954293)
chr7 (76-115)||(8234153-8234192)
chr7 (30-77)||(41201865-41201912)
chr7 (78-116)||(2424620-2424658)
chr7 (80-110)||(4248223-4248253)
chr7 (76-114)||(7438714-7438752)
chr7 (76-114)||(9408347-9408385)
chr7 (77-115)||(13300417-13300455)
chr7 (36-78)||(21781081-21781123)
chr7 (78-116)||(29787384-29787422)
chr7 (78-115)||(11665455-11665492)
chr7 (76-113)||(12843188-12843225)
chr7 (79-116)||(32308126-32308163)
chr7 (81-114)||(44020983-44021016)
chr7 (78-114)||(8056960-8056995)
chr7 (76-112)||(9778510-9778546)
chr7 (76-116)||(11061089-11061129)
chr7 (78-114)||(11890934-11890970)
chr7 (76-116)||(18215199-18215239)
chr7 (76-116)||(23191902-23191942)
chr7 (78-114)||(27732254-27732290)
chr7 (76-115)||(32094033-32094073)
chr7 (79-115)||(35861971-35862007)
chr7 (76-116)||(43027482-43027522)
[»] chr1 (47 HSPs)
chr1 (29-77)||(34678697-34678745)
chr1 (76-115)||(18190121-18190160)
chr1 (76-114)||(6612184-6612222)
chr1 (76-116)||(113305-113345)
chr1 (76-116)||(21378584-21378624)
chr1 (81-116)||(17754317-17754352)
chr1 (30-77)||(20338977-20339024)
chr1 (76-115)||(24577199-24577238)
chr1 (78-116)||(398780-398818)
chr1 (78-116)||(1486724-1486762)
chr1 (76-114)||(40258946-40258984)
chr1 (76-113)||(18337338-18337375)
chr1 (76-116)||(22515900-22515940)
chr1 (76-116)||(31015049-31015089)
chr1 (76-116)||(31672908-31672948)
chr1 (76-116)||(37055869-37055909)
chr1 (76-116)||(38078674-38078714)
chr1 (76-116)||(41877483-41877523)
chr1 (76-116)||(48450600-48450640)
chr1 (76-115)||(1705005-1705044)
chr1 (76-115)||(22881629-22881668)
chr1 (76-115)||(42359462-42359501)
chr1 (78-116)||(5898281-5898319)
chr1 (78-116)||(8010302-8010340)
chr1 (78-116)||(16927200-16927238)
chr1 (78-116)||(23738684-23738722)
chr1 (78-116)||(36878467-36878505)
chr1 (78-116)||(40181877-40181915)
chr1 (76-114)||(47989505-47989543)
chr1 (78-115)||(7918226-7918263)
chr1 (79-116)||(12443476-12443513)
chr1 (78-115)||(34298443-34298480)
chr1 (78-114)||(1864895-1864931)
chr1 (84-116)||(2851027-2851059)
chr1 (76-116)||(3490403-3490443)
chr1 (79-115)||(9828051-9828087)
chr1 (76-116)||(11605948-11605988)
chr1 (76-116)||(19058869-19058909)
chr1 (80-116)||(21038089-21038125)
chr1 (78-114)||(22794093-22794129)
chr1 (80-116)||(26238129-26238165)
chr1 (76-116)||(27471579-27471619)
chr1 (78-114)||(28674808-28674844)
chr1 (76-116)||(29144371-29144411)
chr1 (80-116)||(30847737-30847773)
chr1 (76-116)||(46348396-46348436)
chr1 (76-115)||(51410031-51410071)
[»] chr8 (34 HSPs)
chr8 (30-77)||(11722682-11722729)
chr8 (30-78)||(9763184-9763232)
chr8 (76-116)||(25566847-25566887)
chr8 (76-115)||(4948659-4948698)
chr8 (78-115)||(7658470-7658507)
chr8 (78-115)||(13203648-13203685)
chr8 (76-116)||(7442851-7442891)
chr8 (76-116)||(8342978-8343018)
chr8 (76-116)||(8343322-8343362)
chr8 (30-78)||(16375952-16376000)
chr8 (76-116)||(22596000-22596040)
chr8 (76-116)||(30077400-30077440)
chr8 (76-115)||(2572069-2572108)
chr8 (76-115)||(36450767-36450806)
chr8 (78-116)||(3025557-3025595)
chr8 (78-116)||(4611540-4611578)
chr8 (76-110)||(18170495-18170529)
chr8 (76-110)||(18634063-18634097)
chr8 (76-114)||(20873077-20873115)
chr8 (76-114)||(24669441-24669479)
chr8 (76-114)||(28642416-28642454)
chr8 (78-116)||(34897091-34897129)
chr8 (76-114)||(41831953-41831991)
chr8 (78-115)||(14134706-14134743)
chr8 (78-115)||(15816144-15816181)
chr8 (76-113)||(40332200-40332237)
chr8 (36-77)||(44462714-44462755)
chr8 (36-77)||(44470245-44470286)
chr8 (78-114)||(11927101-11927137)
chr8 (76-116)||(18407725-18407765)
chr8 (76-116)||(22197755-22197795)
chr8 (76-116)||(22651982-22652022)
chr8 (76-116)||(29510317-29510357)
chr8 (76-116)||(30271304-30271344)
[»] scaffold0223 (1 HSPs)
scaffold0223 (76-116)||(20178-20218)
[»] scaffold0103 (1 HSPs)
scaffold0103 (76-116)||(51817-51857)
[»] scaffold0066 (1 HSPs)
scaffold0066 (76-116)||(33376-33416)
[»] scaffold0004 (1 HSPs)
scaffold0004 (76-116)||(92813-92853)
[»] chr4 (29 HSPs)
chr4 (76-116)||(11596365-11596405)
chr4 (76-116)||(21945509-21945549)
chr4 (76-116)||(28964261-28964301)
chr4 (76-116)||(29205450-29205490)
chr4 (76-116)||(51701264-51701304)
chr4 (78-116)||(2361990-2362028)
chr4 (69-115)||(14465081-14465127)
chr4 (30-76)||(16924484-16924530)
chr4 (78-115)||(54580038-54580075)
chr4 (76-116)||(3947779-3947819)
chr4 (76-116)||(23292999-23293039)
chr4 (78-114)||(24343515-24343551)
chr4 (76-116)||(37203270-37203310)
chr4 (76-114)||(6485624-6485662)
chr4 (78-116)||(8423733-8423771)
chr4 (78-116)||(15029771-15029809)
chr4 (76-116)||(30298952-30298993)
chr4 (76-116)||(30327820-30327861)
chr4 (78-115)||(36635331-36635368)
chr4 (78-115)||(37698719-37698756)
chr4 (76-116)||(847957-847997)
chr4 (78-114)||(903930-903966)
chr4 (76-116)||(12895129-12895169)
chr4 (78-114)||(22440615-22440651)
chr4 (47-79)||(32215100-32215132)
chr4 (78-114)||(32910559-32910595)
chr4 (76-116)||(38847025-38847065)
chr4 (78-114)||(40179651-40179687)
chr4 (76-116)||(47263992-47264032)
[»] scaffold1528 (1 HSPs)
scaffold1528 (81-116)||(1041-1076)
[»] scaffold0361 (1 HSPs)
scaffold0361 (76-115)||(14537-14576)
[»] scaffold0260 (1 HSPs)
scaffold0260 (30-77)||(1300-1347)
[»] scaffold0027 (1 HSPs)
scaffold0027 (76-114)||(46690-46728)
[»] scaffold0722 (1 HSPs)
scaffold0722 (76-116)||(7045-7085)
[»] scaffold0652 (1 HSPs)
scaffold0652 (76-116)||(475-515)
[»] scaffold0050 (1 HSPs)
scaffold0050 (78-114)||(70286-70322)
[»] scaffold0049 (1 HSPs)
scaffold0049 (76-116)||(63779-63819)
[»] scaffold0573 (1 HSPs)
scaffold0573 (30-77)||(6921-6968)
[»] scaffold0011 (1 HSPs)
scaffold0011 (76-115)||(17762-17801)
[»] scaffold0136 (1 HSPs)
scaffold0136 (76-114)||(3862-3900)
[»] scaffold0021 (1 HSPs)
scaffold0021 (76-114)||(130490-130528)
[»] scaffold0018 (2 HSPs)
scaffold0018 (76-114)||(192262-192300)
scaffold0018 (76-115)||(178831-178871)


Alignment Details
Target: chr6 (Bit Score: 328; Significance: 0; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 175 - 549
Target Start/End: Complemental strand, 12696282 - 12695897
Alignment:
Q  175 cttcattatgattatgatgtgttatatcctaagataaatgatgaaggaaaaaagataacaggctattgtgactcagactcatgtggagataacgttgaaa 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12696282 cttcattatgattatgatgtgttatatcctaagataaatgatgaaggaaaaaagataataggctattgtgactcagactcatgtggagataacgttgaaa 12696183  T
Q  275 gaaggagcaaaatgggaaacatgttcaaaattttcaactcaccattctcccggagttcaaagaaacaaacagttgtaccactgtcaacttgtgaagttga 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12696182 gaaggagcaaaatgggaaacatgttcaaaattttcaactcaccattctcccggagttcaaagaaacaaacagttgtagcactgtcaacttgtgaagttga 12696083  T
Q  375 atacatatcgcct-----------atgataaggattatggttacaataacttctacttgaaatgcagataggtgtaggagaacaaattgagttgttggtg 463  Q
    |||||||||||||           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12696082 atacatatcgccttgcaatgcaacatgataaggattatggttacaataacttctacttgaaatgaagataggtgtaggagaacaaattgagttgttggtg 12695983  T
Q  464 gaaaataaatacgctatcaacgttgcaagggatcccatagctcatgggaggagcaagcagatatagaccgaataccatattcttcg 549  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  12695982 gaaaataaatacgctatcaacgttgcaagggatcccatagctcatgggaggagcaagcagatatagaccgaataccactttcttcg 12695897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 7977843 - 7977883
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7977843 tgtaattacactgaattatgtaattttttcaaattattagc 7977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 12696370 - 12696330
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12696370 tgtaattacactgaattatgtaattttttcaaattattagc 12696330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 16766743 - 16766703
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  16766743 tgtaattacactgaattatgtgattttttcaaattattagc 16766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 17435245 - 17435205
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  17435245 tgtaattacactgaattatgtaattttttaaaattattagc 17435205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 28715341 - 28715301
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  28715341 tgtaattacactgaattatgtcattttttcaaattattagc 28715301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 4968305 - 4968258
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||    
T  4968305 tcaaacccttgacaaaatccctggcaaaaggtcattattcttgtagtg 4968258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 10770687 - 10770726
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  10770687 tgtaattacactgaattatgtgattttttcaaattattag 10770726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 31384966 - 31384927
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  31384966 tgtaattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 34595180 - 34595141
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  34595180 tgtaattacactgaattatgtgattttttcaaattattag 34595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 1532284 - 1532246
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  1532284 taattacactgaattatgtaattttatcaaattattagc 1532246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 5970121 - 5970159
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  5970121 tgtaattacactgaattatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 6349750 - 6349788
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6349750 tgtaattacaatgaattatgtaattttttcaaattatta 6349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 7569183 - 7569219
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||||||| |||||||||||    
T  7569183 taattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 9107383 - 9107423
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  9107383 tgtaattacactgaattttgtgattttttcaaattattagc 9107423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 17841602 - 17841642
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  17841602 tgtaattacactaaattatgtgattttttcaaattattagc 17841642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 31959205 - 31959165
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  31959205 tgtaattacactgcattatgtgattttttcaaattattagc 31959165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 1681804 - 1681765
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||||||||||| || ||||||||||||||||||    
T  1681804 tgtaattacactgaattacgtgattttttcaaattattag 1681765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 6898294 - 6898333
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  6898294 tgtaattacacttaattatgtaatttgttcaaattattag 6898333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 7801169 - 7801208
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  7801169 tgtaattacgctgaattatgtgattttttcaaattattag 7801208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 8776986 - 8777025
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  8776986 tgtaattacactgaattttgtgattttttcaaattattag 8777025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 9522937 - 9522898
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  9522937 tgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 15489745 - 15489784
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  15489745 tgtaattacattgaattgtgtaattttttcaaattattag 15489784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 16388248 - 16388283
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatt 113  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 16833354 - 16833315
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  16833354 tgtaattacactgaagtatgtgattttttcaaattattag 16833315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 28902873 - 28902826
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    |||||||||||||||||||||||||||| | | | |||||||||||||    
T  28902873 tcaaacccttgtcaaaatccctggcaaaaggtaactattcttgtagtg 28902826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 6327531 - 6327569
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  6327531 tgtaattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 7265608 - 7265646
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  7265608 taattacactgaattatgtgattttctcaaattattagc 7265646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 9025509 - 9025547
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  9025509 taattacactgaattatgtgattttctcaaattattagc 9025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 19040396 - 19040358
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  19040396 taattacactgaattatgtgattttctcaaattattagc 19040358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 25038084 - 25038122
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  25038084 tgtaattacactaaattatgtaattttctcaaattatta 25038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 7151456 - 7151419
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  7151456 taattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 34225824 - 34225861
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  34225824 taattacactgaattatgcgattttttcaaattattag 34225861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 1191713 - 1191753
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||| ||| | |||||||||||||||||    
T  1191713 tgtaattacactgaattttgtgaatttttcaaattattagc 1191753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 2224272 - 2224232
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| | ||||||| |||||||||||    
T  2224272 tgtaattacactgaattatatgatttttttaaattattagc 2224232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 10842574 - 10842538
Alignment:
Q  80 attacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||| |||||||| |||||||||||||||||||    
T  10842574 attacactaaattatgtgattttttcaaattattagc 10842538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 17341679 - 17341715
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  17341679 taattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 25010215 - 25010255
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||| || ||||||||||| |||||||||||||||||||    
T  25010215 tgtaataacgctgaattatgtgattttttcaaattattagc 25010255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 28152144 - 28152105
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  28152144 tgtaattacactgaattatgtga-tttttcaaattattagc 28152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 31579240 - 31579276
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  31579240 taattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 6e-17; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 33908912 - 33908961
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtgta 79  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33908912 tcaaacccttgtcaaaatccctggcaaagggtcattattcttgtagtgta 33908961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 4987304 - 4987344
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  4987304 tgtaattacactgaattatgtgattttttcaaattattagc 4987344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 26508156 - 26508116
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  26508156 tgtaattacactgaattatgtgattttttcaaattattagc 26508116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 28918047 - 28918007
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  28918047 tgtaattacactgaattatgtgattttttcaaattattagc 28918007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 34910363 - 34910324
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  34910363 tgtaattacactgaattatgtgattttttcaaattattag 34910324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 7928494 - 7928456
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  7928494 taattacactgaattatgtgattttttcaaattattagc 7928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 25948902 - 25948940
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  25948902 taattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 14979224 - 14979187
Alignment:
Q  79 aattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||||| |||||||||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagc 14979187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 20503511 - 20503474
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatt 113  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  20503511 tgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 1509585 - 1509545
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  1509585 tgtaattacactaaattatgtgattttttcaaattattagc 1509545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 4990980 - 4991020
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||| ||||| |||||||    
T  4990980 tgtaattacactgaattatgtaattttctcaaactattagc 4991020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 18554414 - 18554462
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtgt 78  Q
    |||||||||||||||||||||||||||| | | | ||||||||||||||    
T  18554414 tcaaacccttgtcaaaatccctggcaaaaggtaactattcttgtagtgt 18554462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 21256999 - 21257039
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  21256999 tgtaattatactgaattatgtgattttttcaaattattagc 21257039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 23702367 - 23702319
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtgt 78  Q
    |||||||||||||||||||||||||||| | | | ||||||||||||||    
T  23702367 tcaaacccttgtcaaaatccctggcaaaaggtaactattcttgtagtgt 23702319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 23720823 - 23720775
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtgt 78  Q
    |||||||||||||||||||||||||||| | | | ||||||||||||||    
T  23720823 tcaaacccttgtcaaaatccctggcaaaaggtaactattcttgtagtgt 23720775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 23739279 - 23739231
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtgt 78  Q
    |||||||||||||||||||||||||||| | | | ||||||||||||||    
T  23739279 tcaaacccttgtcaaaatccctggcaaaaggtaactattcttgtagtgt 23739231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 49651799 - 49651839
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  49651799 tgtaattacagtgaattatgtgattttttcaaattattagc 49651839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 51206366 - 51206406
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  51206366 tgtatttacactgaattatgtgattttttcaaattattagc 51206406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 116
Target Start/End: Original strand, 3164043 - 3164078
Alignment:
Q  81 ttacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||| |||||||||||||||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagc 3164078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 115
Target Start/End: Complemental strand, 10954994 - 10954959
Alignment:
Q  80 attacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10954994 attacactgaattatgtgattttttcaaattattag 10954959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 14209159 - 14209120
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  14209159 tgtaattacactgaattatgtgattttttaaaattattag 14209120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 21479163 - 21479124
Alignment:
Q  77 gtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  21479163 gtaattacactgaattgtgtgattttttcaaattattagc 21479124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 55401121 - 55401082
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  55401121 tgtaattacactaaattatgtgattttttcaaattattag 55401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 8039850 - 8039888
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  8039850 taattacactgaattatataattttctcaaattattagc 8039888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 10268499 - 10268537
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  10268499 tgtaattacactaaattatgtgattttttcaaattatta 10268537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 116
Target Start/End: Complemental strand, 11155064 - 11155030
Alignment:
Q  82 tacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||| |||||||||||||||||    
T  11155064 tacactgaattatgtaaatttttcaaattattagc 11155030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 11252022 - 11251984
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  11252022 taattacactgaattatgtgattttctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 15796307 - 15796345
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  15796307 tgtaattacactgaattatatgattttttcaaattatta 15796345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 29508488 - 29508451
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  29508488 taattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 4201440 - 4201404
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||||| |||||||| |||||||||||||||||    
T  4201440 taattacacttaattatgtgattttttcaaattatta 4201404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 9800083 - 9800047
Alignment:
Q  79 aattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  9800083 aattacacggaattatgtaattttctcaaattattag 9800047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 11610567 - 11610527
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||| ||||||||||||||| ||||||| |||||||||||    
T  11610567 tgtaactacactgaattatgtgatttttttaaattattagc 11610527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 14832145 - 14832105
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||| ||| |||||| |||||||||||||||||||    
T  14832145 tgtaattacattgagttatgtgattttttcaaattattagc 14832105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 16192765 - 16192801
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  16192765 taattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 21211332 - 21211296
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  21211332 taattacactgaactatgtaattttctcaaattatta 21211296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 26492218 - 26492258
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||| | | |||||||||||||||||||    
T  26492218 tgtaattacactgaattgtatgattttttcaaattattagc 26492258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 34185136 - 34185176
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||| ||| ||||||| |||||||||||    
T  34185136 tgtaattacactgaattgtgtgattttttgaaattattagc 34185176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 35994751 - 35994790
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  35994751 tgtaattacactgaattatgtga-tttttcaaattattagc 35994790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 9e-16; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 35593258 - 35593211
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  35593258 tcaaacccttgtcaaaatccctggcaaagggtcattattcttgtagtg 35593211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 11882237 - 11882286
Alignment:
Q  29 atcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtgt 78  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  11882237 atcaaacccttgtcaaaatccctggcaaaaggtcattattcttgtagtgt 11882286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 21374712 - 21374752
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21374712 tgtaattacactgaattatgtaattttttcaaattattagc 21374752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 4969072 - 4969119
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  4969072 tcaaacccttgtcaaaatctctggcaaagggtcattattcttgtagtg 4969119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 383
Target Start/End: Complemental strand, 12447679 - 12447568
Alignment:
Q  272 aaagaaggagcaaaatgggaaacatgttcaaaattttcaactcaccattctcccggagttcaaagaaacaaacagttgtaccactgtcaacttgtgaagt 371  Q
    ||||| |||||| |||| || |||| |||| ||||||||||| |||| ||||   ||||||||||||||| ||| || || ||||||||||||||||||     
T  12447679 aaagagggagcacaatgagatacattttcagaattttcaactaaccaatctcatagagttcaaagaaacatacaattctagcactgtcaacttgtgaagc 12447580  T
Q  372 tgaatacatatc 383  Q
    |  |||||||||    
T  12447579 tatatacatatc 12447568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 30717543 - 30717583
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  30717543 tgtaattacactgaattatgtgattttttcaaattattagc 30717583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 37393291 - 37393339
Alignment:
Q  29 atcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  37393291 atcaaacccttgtcaaaatccttggcaaaaggtcattattcttgtagtg 37393339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 39323310 - 39323270
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  39323310 tgtaattacactgaattatgtaattttgtcaaattattagc 39323270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 18841026 - 18841065
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  18841026 tgtaattacacttaattatgtaattttttcaaattattag 18841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 15972919 - 15972881
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  15972919 tgtaattacactgaattgtgtaattttttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 28677953 - 28677915
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagc 28677915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 30404863 - 30404901
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  30404863 tgtaattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 12668438 - 12668475
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  12668438 taattacactgaattatgtcattttttcaaattattag 12668475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 2438732 - 2438772
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  2438732 tgtaattacactgaattatgtgattttttgaaattattagc 2438772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 11223876 - 11223916
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| ||||||||||| |||||||    
T  11223876 tgtaattacactgaattatgttattttttcaaaatattagc 11223916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 23921297 - 23921261
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||||||| |||||||||||    
T  23921297 taattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 40361769 - 40361805
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||||| ||||||||||||||||||||||||||    
T  40361769 taattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 12940948 - 12940987
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  12940948 tgtaattacactgaattatatgattttttcaaattattag 12940987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 15657910 - 15657871
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  15657910 tgtaattacactgaattatgtgatttttacaaattattag 15657871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 30335463 - 30335424
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  30335463 tgtaattacactaaattatgtcattttttcaaattattag 30335424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 21616806 - 21616768
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagc 21616768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 21782833 - 21782871
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagc 21782871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 42832291 - 42832329
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  42832291 taattacactgaaatatgtaattttctcaaattattagc 42832329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 1886892 - 1886929
Alignment:
Q  77 gtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  1886892 gtaattacattgaattatgtaaatttttcaaattatta 1886929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 36756359 - 36756396
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  36756359 taattacactgaattatgttatttcttcaaattattag 36756396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 37419789 - 37419752
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatt 113  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  37419789 tgtaattacactgaattttgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 4882709 - 4882749
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| | |||||||||||| ||||||    
T  4882709 tgtaattacactgaattatatcattttttcaaataattagc 4882749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 6940301 - 6940261
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||||| ||||| |||||||||||    
T  6940301 tgtaattacacttaattatgtaactttttaaaattattagc 6940261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 11308021 - 11308053
Alignment:
Q  80 attacactgaattatgtaattttttcaaattat 112  Q
    ||||||||||||||||| |||||||||||||||    
T  11308021 attacactgaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 19536410 - 19536450
Alignment:
Q  76 tgtaattacactgaattatgt-aattttttcaaattattag 115  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  19536410 tgtaattacactgaattatgtgatttttttcaaattattag 19536450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 20539687 - 20539727
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||| | |||||||||||||||||||    
T  20539687 tgtaattacactaaattatatgattttttcaaattattagc 20539727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 28412394 - 28412358
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattatta 28412358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 37559023 - 37558983
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||| |||||||||| |||||| ||||||||||||    
T  37559023 tgtaattacattgaattatgtgatttttacaaattattagc 37558983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 38117172 - 38117212
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||| ||| ||||| |||||||||||||||||||    
T  38117172 tgtaattacaccgaagtatgtgattttttcaaattattagc 38117212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 383
Target Start/End: Complemental strand, 36072897 - 36072807
Alignment:
Q  293 acatgttcaaaattttcaactcaccattctcccggagttcaaagaaacaaacagttgtaccactgtcaacttgtgaagttgaatacatatc 383  Q
    ||||||||||||||||||||||||   | |||  || ||||||||||||||||  |||| |||| ||||||||||||||||||| ||||||    
T  36072897 acatgttcaaaattttcaactcactgatatccttgaattcaaagaaacaaacaactgtagcactatcaacttgtgaagttgaattcatatc 36072807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 43001846 - 43001806
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  43001846 tgtaattacactgaattatgtaattttttcaaattattagc 43001806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 21191069 - 21191109
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  21191069 tgtaattacactgaattatgtgattttttcaaattattagc 21191109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 21576758 - 21576798
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  21576758 tgtaattacactgaattatgtgattttttcaaattattagc 21576798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 27932281 - 27932241
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  27932281 tgtaattacactgaattatgtaattttctcaaattattagc 27932241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 39698587 - 39698547
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  39698587 tgtaattacactgaattatgtgattttttcaaattattagc 39698547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 41633781 - 41633741
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  41633781 tgtaattacactgaattatgtaaatttttcaaattattagc 41633741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 6247668 - 6247629
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  6247668 tgtaattacactgaattatgtgattttttcaaattattag 6247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 24906314 - 24906352
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  24906314 tgtaattacactgaattatgtcattttttcaaattatta 24906352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 522
Target Start/End: Complemental strand, 36072763 - 36072657
Alignment:
Q  416 ctacttgaaatgcagataggtgtaggagaacaaattgagttgttggtggaaaataaatacgctatcaacgttgcaagggatcccatagctcatgggagga 515  Q
    |||||| ||||| ||||| |||||||||| |||||| || | |||||||| |||||||  |||  |||| ||| |||| ||| || ||||||| ||||||    
T  36072763 ctacttaaaatgaagataagtgtaggagagcaaattaagctattggtggacaataaatttgctgacaaccttgtaaggaatctcaaagctcataggagga 36072664  T
Q  516 gcaagca 522  Q
    |||||||    
T  36072663 gcaagca 36072657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 6326310 - 6326350
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  6326310 tgtaattacactgaattatgtaattttctcaaattactagc 6326350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 8420073 - 8420033
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  8420073 tgtaattacattgaattatgttattttttcaaattattagc 8420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 14674315 - 14674275
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  14674315 tgtaattacactaaattatgtgattttttcaaattattagc 14674275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 21522796 - 21522756
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  21522796 tgtaattacactgaattatgttattttttaaaattattagc 21522756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 21533362 - 21533322
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  21533362 tgtaattacactgaattatgttattttttaaaattattagc 21533322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 31084369 - 31084329
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  31084369 tgtaattacattgaattatgtgattttttcaaattattagc 31084329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 42893406 - 42893366
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  42893406 tgtaattacactggattatgtgattttttcaaattattagc 42893366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 4344784 - 4344750
Alignment:
Q  80 attacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||| |||||||||||||||||    
T  4344784 attacactgaattatgtcattttttcaaattatta 4344750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 6471904 - 6471942
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  6471904 taattacactgaattatgtgattttctcaaattattagc 6471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 7677749 - 7677711
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  7677749 taattgcactgaattatgtgattttttcaaattattagc 7677711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 13287412 - 13287450
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  13287412 tgtagttacactgaattatgtgattttttcaaattatta 13287450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 22013458 - 22013420
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagc 22013420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 36838587 - 36838549
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  36838587 taattacactaaattatgtaattttctcaaattattagc 36838549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 40131665 - 40131628
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  40131665 taattaaactgaattatgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 5467993 - 5468029
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  5467993 taattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 7218280 - 7218320
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||| || |||||||||||    
T  7218280 tgtaattacactgaattatgtgatttatttaaattattagc 7218320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 28588689 - 28588725
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  28588689 taattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 38749578 - 38749614
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||| |||||||||| |||||||||||||||||    
T  38749578 taattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 6861 - 6909
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtgt 78  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  6861 tcaaaaccttgtcaaaatccctggcaaagggtcattattcttgtagtgt 6909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 19764444 - 19764492
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtgt 78  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19764444 tcaaacccttgtcaaaatccctggcaaaaggtcattattcttgtagtgt 19764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 7306122 - 7306169
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||    
T  7306122 tcaaacccttgtcaaaatccctggcaaatggtcattattcttgtagtg 7306169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 13770737 - 13770697
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  13770737 tgtaattacactgaattatgtaatttttttaaattattagc 13770697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 21880198 - 21880158
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  21880198 tgtaattacactgaattatgtaattttctcaaattattagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 24339688 - 24339648
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  24339688 tgtaattacactgaattatgtgattttttcaaattattagc 24339648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 25481948 - 25481908
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  25481948 tgtaattacactgaattatgtgattttttcaaattattagc 25481908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 26033474 - 26033514
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  26033474 tgtaattacactgaattatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 30813858 - 30813818
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  30813858 tgtaattacactgaattatgtaattttctcaaattattagc 30813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 27945087 - 27945048
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  27945087 tgtaattacactgaattatgtaattttctcaaattattag 27945048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 18013089 - 18013126
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  18013089 taattacactgaattatgtaatttttttaaattattag 18013126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 5409849 - 5409889
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  5409849 tgtaattgcactgaattatgtgattttttcaaattattagc 5409889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 24105724 - 24105684
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  24105724 tgtaattacactgaatcatgcaattttttcaaattattagc 24105684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 28155616 - 28155576
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  28155616 tgtaattacaccgaattatgtaattttctcaaattattagc 28155576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 3991370 - 3991331
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  3991370 tgtaattatactgaattatgtgattttttcaaattattag 3991331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 5954293 - 5954254
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  5954293 tgtaattacactagattatgtaattttttcaaattattag 5954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 8234192 - 8234153
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  8234192 tgtaactacactgaattatgttattttttcaaattattag 8234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 41201865 - 41201912
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    |||||||||||||||||||||||||||| | | | |||||||||||||    
T  41201865 tcaaacccttgtcaaaatccctggcaaaaggtaactattcttgtagtg 41201912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 2424658 - 2424620
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  2424658 taattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 4248253 - 4248223
Alignment:
Q  80 attacactgaattatgtaattttttcaaatt 110  Q
    |||||||||||||||||||||||||||||||    
T  4248253 attacactgaattatgtaattttttcaaatt 4248223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 7438752 - 7438714
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  7438752 tgtaattacattgaattatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 9408347 - 9408385
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  9408347 tgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 13300455 - 13300417
Alignment:
Q  77 gtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  13300455 gtaattacactgaattatatgattttttcaaattattag 13300417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 21781081 - 21781123
Alignment:
Q  36 ccttgtcaaaatccctggcaaaggctcattattcttgtagtgt 78  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  21781081 ccttgacaaaatccctggcaaaaggtcattattcttgtagtgt 21781123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 29787384 - 29787422
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagc 29787422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 11665455 - 11665492
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  11665455 taattagactgaattatgtgattttttcaaattattag 11665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 12843188 - 12843225
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatt 113  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  12843188 tgtaattacattgaattatgtaattttatcaaattatt 12843225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 32308163 - 32308126
Alignment:
Q  79 aattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagc 32308126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 44021016 - 44020983
Alignment:
Q  81 ttacactgaattatgtaattttttcaaattatta 114  Q
    ||||| ||||||||||||||||||||||||||||    
T  44021016 ttacattgaattatgtaattttttcaaattatta 44020983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 8056960 - 8056995
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||||||||| |||||||||    
T  8056960 taattacactgaattatgtaatttttt-aaattatta 8056995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 9778546 - 9778510
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattat 112  Q
    |||||||| |||||||||||| |||||||||||||||    
T  9778546 tgtaattatactgaattatgtgattttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 11061089 - 11061129
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||| ||| |||||||| |||||||||||||||||||    
T  11061089 tgtaattatactaaattatgtgattttttcaaattattagc 11061129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 11890934 - 11890970
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||| | |||||||||||||||||    
T  11890934 taattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 18215199 - 18215239
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||| ||||||| ||||||| |||||||||||||||||||    
T  18215199 tgtaactacactgcattatgtgattttttcaaattattagc 18215239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 23191942 - 23191902
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  23191942 tgtaattacactgaaatatgtgattttctcaaattattagc 23191902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 27732254 - 27732290
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||||||| | |||||||||    
T  27732254 taattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 32094033 - 32094073
Alignment:
Q  76 tgtaattacactgaattatgt-aattttttcaaattattag 115  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  32094033 tgtaattacactgaattatgtgatttttttcaaattattag 32094073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 35862007 - 35861971
Alignment:
Q  79 aattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  35862007 aattacattgaattatgtgattttttcaaattattag 35861971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 43027482 - 43027522
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||| |||||||| ||||||| |||||||||||||||||||    
T  43027482 tgtatttacactgcattatgtgattttttcaaattattagc 43027522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 34678697 - 34678745
Alignment:
Q  29 atcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||    
T  34678697 atcaaacccttgtcaaaatccctggcaaaaggtcattattcttgtagtg 34678745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 18190121 - 18190160
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18190121 tgtaattacactgaattatgtaattttttcaaattattag 18190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 6612184 - 6612222
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6612184 tgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 113345 - 113305
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  113345 tgtaattacactgaattatgtgattttttcaaattattagc 113305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 21378624 - 21378584
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  21378624 tgtaattacactgaattatgtaattttttcaatttattagc 21378584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 116
Target Start/End: Complemental strand, 17754352 - 17754317
Alignment:
Q  81 ttacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||||||||||||    
T  17754352 ttacactgaattatgtaattttttcaaattattagc 17754317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 20338977 - 20339024
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||    
T  20338977 tcaaacccttgacaaaatccctggcaaaaggtcattattcttgtagtg 20339024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 24577199 - 24577238
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  24577199 tgtaattacactgaattatgtgattttttcaaattattag 24577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 398780 - 398818
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagc 398818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 1486724 - 1486762
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  1486724 taattacactgaattatgtgattttttcaaattattagc 1486762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 40258946 - 40258984
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  40258946 tgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 18337375 - 18337338
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatt 113  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  18337375 tgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 22515900 - 22515940
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  22515900 tgtaattacactaaattatgtgattttttcaaattattagc 22515940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 31015089 - 31015049
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  31015089 tgtaattacactgaattatgtgattttctcaaattattagc 31015049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 31672908 - 31672948
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  31672908 tgtaattacactgaattaagtgattttttcaaattattagc 31672948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 37055869 - 37055909
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  37055869 tgtaattacactaaattatgtaattttctcaaattattagc 37055909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 38078674 - 38078714
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  38078674 tgtaattacattgaattatgtgattttttcaaattattagc 38078714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 41877483 - 41877523
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  41877483 tgtaattacactaaattatgtaattttctcaaattattagc 41877523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 48450600 - 48450640
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  48450600 tgtaattacactaaattatgttattttttcaaattattagc 48450640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 1705005 - 1705044
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  1705005 tgtaattaccctgaattatgtgattttttcaaattattag 1705044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 22881629 - 22881668
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  22881629 tgtaattacactaaattatgtgattttttcaaattattag 22881668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 42359462 - 42359501
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  42359462 tgtaattacactgaattttgtgattttttcaaattattag 42359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 5898281 - 5898319
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  5898281 taattacactgaattatgtgattttttcagattattagc 5898319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 8010302 - 8010340
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  8010302 taattatactgaattatataattttttcaaattattagc 8010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 16927200 - 16927238
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattagc 16927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 23738722 - 23738684
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  23738722 taattgcactgaattatgtgattttttcaaattattagc 23738684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 36878505 - 36878467
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  36878505 taattacactgaattatgtgattttctcaaattattagc 36878467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 40181915 - 40181877
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  40181915 taattacactgaattatgtgattttctcaaattattagc 40181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 47989543 - 47989505
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  47989543 tgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 7918226 - 7918263
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  7918226 taattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 12443476 - 12443513
Alignment:
Q  79 aattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagc 12443513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 34298480 - 34298443
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattag 34298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 1864895 - 1864931
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  1864895 taattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 2851059 - 2851027
Alignment:
Q  84 cactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| |||||||||||||    
T  2851059 cactgaattatgtaattttatcaaattattagc 2851027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 3490403 - 3490443
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||| ||||| |||| |||||||||||||    
T  3490403 tgtaattacactgaataatgtagttttctcaaattattagc 3490443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 9828087 - 9828051
Alignment:
Q  79 aattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  9828087 aattacactgaattatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 11605948 - 11605988
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||| ||||||||||| | |||||||||||||||||||    
T  11605948 tgtaatttcactgaattatatgattttttcaaattattagc 11605988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 19058869 - 19058909
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| || |||| |||||||||||    
T  19058869 tgtaattacactgaattatgttatctttttaaattattagc 19058909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 21038125 - 21038089
Alignment:
Q  80 attacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||| | |||||||||||    
T  21038125 attacactgaattatgtaattttcttaaattattagc 21038089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 22794093 - 22794129
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  22794093 taattacactgtattatgtcattttttcaaattatta 22794129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 26238129 - 26238165
Alignment:
Q  80 attacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  26238129 attacactgaattatgttattttctcaaattattagc 26238165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 27471579 - 27471619
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||||||||  |||| |||||||||||||    
T  27471579 tgtaattacactgaattatgtgcttttctcaaattattagc 27471619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 28674844 - 28674808
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    |||||| |||||||||||||||||| |||||||||||    
T  28674844 taattatactgaattatgtaattttctcaaattatta 28674808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 29144371 - 29144411
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||| ||||| || ||||||||||||||||||    
T  29144371 tgtaattacactgcattatctatttttttcaaattattagc 29144411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 30847737 - 30847773
Alignment:
Q  80 attacactgaattatgtaattttttcaaattattagc 116  Q
    |||||| |||||||||| |||||||||||||||||||    
T  30847737 attacattgaattatgtcattttttcaaattattagc 30847773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 46348396 - 46348436
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||| | |||||||||||||||||||    
T  46348396 tgtaattacactaaattatatgattttttcaaattattagc 46348436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 51410071 - 51410031
Alignment:
Q  76 tgtaattacactgaattatgt-aattttttcaaattattag 115  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  51410071 tgtaattacactgaattatgtgatttttttcaaattattag 51410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 11722682 - 11722729
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||    
T  11722682 tcaaacccttgtcaaaatccctggcaaaaggtcattattcttgtagtg 11722729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 9763232 - 9763184
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtgt 78  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  9763232 tcaaacccttgacaaaatccctggcaaaaggtcattattcttgtagtgt 9763184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 25566887 - 25566847
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  25566887 tgtaattacactgaattatgtgattttttcaaattattagc 25566847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 4948698 - 4948659
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  4948698 tgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 7658507 - 7658470
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  7658507 taattacactgaattatgtaattttctcaaattattag 7658470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 13203685 - 13203648
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  13203685 taattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 7442891 - 7442851
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  7442891 tgtaattacactgaattatgtaattttatgaaattattagc 7442851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 8343018 - 8342978
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  8343018 tgtaattacactaaattatgtgattttttcaaattattagc 8342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 8343362 - 8343322
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  8343362 tgtaattacactaaattatgtgattttttcaaattattagc 8343322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 16375952 - 16376000
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtgt 78  Q
    ||||||||||| |||||||||||||||| | |||||||||||| |||||    
T  16375952 tcaaacccttgacaaaatccctggcaaaaggtcattattcttgcagtgt 16376000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 22596040 - 22596000
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  22596040 tgtaattacactgaattatgttatttttttaaattattagc 22596000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 30077400 - 30077440
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  30077400 tgtaattacactgaattatgtgatgttttcaaattattagc 30077440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 2572069 - 2572108
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  2572069 tgtaattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 36450767 - 36450806
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  36450767 tgtaattacactgaattctgtgattttttcaaattattag 36450806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 3025595 - 3025557
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  3025595 taattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 4611578 - 4611540
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  4611578 taattacactgaattatgttattttctcaaattattagc 4611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 18170495 - 18170529
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaatt 110  Q
    |||||||||| ||||||||||||||||||||||||    
T  18170495 tgtaattacattgaattatgtaattttttcaaatt 18170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 18634063 - 18634097
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaatt 110  Q
    |||||||||| ||||||||||||||||||||||||    
T  18634063 tgtaattacattgaattatgtaattttttcaaatt 18634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 20873115 - 20873077
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  20873115 tgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 24669479 - 24669441
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  24669479 tgtaattacactgaattatgtaatttcctcaaattatta 24669441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 28642454 - 28642416
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  28642454 tgtagttacactgaattatgtaaatttttcaaattatta 28642416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 34897129 - 34897091
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  34897129 taattacactgaattatgtgattttctcaaattattagc 34897091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 41831953 - 41831991
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  41831953 tgtagttacactgaattatgtgattttttcaaattatta 41831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 14134743 - 14134706
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  14134743 taattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 15816144 - 15816181
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  15816144 taattacactaaattatgtgattttttcaaattattag 15816181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 40332237 - 40332200
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatt 113  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  40332237 tgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 44462755 - 44462714
Alignment:
Q  36 ccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    |||||||||||||||||||||| |  ||||||||||||||||    
T  44462755 ccttgtcaaaatccctggcaaatgggcattattcttgtagtg 44462714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 44470286 - 44470245
Alignment:
Q  36 ccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    |||||||||||||||||||||| |  ||||||||||||||||    
T  44470286 ccttgtcaaaatccctggcaaatgggcattattcttgtagtg 44470245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 11927101 - 11927137
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  11927101 taattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 18407765 - 18407725
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||  ||||||||||    
T  18407765 tgtaattacactgaattatgtgatttttttgaattattagc 18407725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 22197755 - 22197795
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||| | |||||||||||||||||    
T  22197755 tgtaattacactaaattatgtgaatttttcaaattattagc 22197795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 22652022 - 22651982
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||| | |||||||||| |||||||||||||||||||    
T  22652022 tgtaattatattgaattatgtgattttttcaaattattagc 22651982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 29510317 - 29510357
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||| |||||||| ||| |||||||||||||||||||    
T  29510317 tgtaattatactgaattttgtgattttttcaaattattagc 29510357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 30271304 - 30271344
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||| ||||||| |||||||||||| ||||||    
T  30271304 tgtaattacactgcattatgtgattttttcaaatgattagc 30271344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 20218 - 20178
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  20218 tgtaattacactgaattatgtgattttttcaaattattagc 20178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 51857 - 51817
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  51857 tgtaattacactgaattatgtgattttttcaaattattagc 51817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 33376 - 33416
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  33376 tgtaattacactgaattatgttattttttcaaattattagc 33416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 92853 - 92813
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  92853 tgtaattacactgaattatgtaattttctcaaattattagc 92813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 11596365 - 11596405
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  11596365 tgtaattacactgaattatgtgattttttcaaattattagc 11596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 21945549 - 21945509
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  21945549 tgtaattacactgaattatgtcattttttcaaattattagc 21945509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 28964261 - 28964301
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  28964261 tgtaattacactgaattatgtgattttttcaaattattagc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 29205490 - 29205450
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  29205490 tgtaattacactgaattatgtgattttttcaaattattagc 29205450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 51701304 - 51701264
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  51701304 tgtaattacactcaattatgtaattttttcaaattattagc 51701264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 2361990 - 2362028
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  2361990 taattacactaaattatgtaattttttcaaattattagc 2362028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 14465081 - 14465127
Alignment:
Q  69 cttgtagtgtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||||    
T  14465081 cttgtaatgtaattacattgaattatgtgattttttcaaattattag 14465127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 16924484 - 16924530
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagt 76  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||    
T  16924484 tcaaacccttgtcaaaatccctagcaaaaggtcattattcttgtagt 16924530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 54580038 - 54580075
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  54580038 taattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 3947779 - 3947819
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  3947779 tgtaattacactgaattatgcgattttttcaaattattagc 3947819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 23292999 - 23293039
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  23292999 tgtaattatactgaattatgtgattttttcaaattattagc 23293039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 24343551 - 24343515
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||||||| |||||||||||    
T  24343551 taattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 37203310 - 37203270
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  37203310 tgtaattacactaaattatgtcattttttcaaattattagc 37203270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 6485624 - 6485662
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  6485624 tgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 8423733 - 8423771
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  8423733 taattacactgaattatgtgattttctcaaattattagc 8423771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 15029809 - 15029771
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  15029809 taattacactgaattatgtgatattttcaaattattagc 15029771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 30298993 - 30298952
Alignment:
Q  76 tgtaattacactgaattatgt-aattttttcaaattattagc 116  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  30298993 tgtaattacactgaattatgtcatttttttcaaattattagc 30298952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 30327861 - 30327820
Alignment:
Q  76 tgtaattacactgaattatgt-aattttttcaaattattagc 116  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  30327861 tgtaattacactgaattatgtcatttttttcaaattattagc 30327820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 36635368 - 36635331
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  36635368 taattacactgaattatgtgattttctcaaattattag 36635331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 37698756 - 37698719
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  37698756 taattacactgaattatataattttctcaaattattag 37698719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 847997 - 847957
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||| | |||||||||||||||| |||||||||||||    
T  847997 tgtaattatagtgaattatgtaattttctcaaattattagc 847957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 903966 - 903930
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  903966 taattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 12895129 - 12895169
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||  |||||||||| |||||||||||||||||||    
T  12895129 tgtaattactttgaattatgtgattttttcaaattattagc 12895169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 22440615 - 22440651
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  22440615 taattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 32215132 - 32215100
Alignment:
Q  47 tccctggcaaaggctcattattcttgtagtgta 79  Q
    ||||||||||||| |||||||||||||||||||    
T  32215132 tccctggcaaagggtcattattcttgtagtgta 32215100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 32910595 - 32910559
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  32910595 taattacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 38847025 - 38847065
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||||||||||| || | |||||||||||||||||||    
T  38847025 tgtaattacactgaataatatgattttttcaaattattagc 38847065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 40179651 - 40179687
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  40179651 taattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 47264032 - 47263992
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||| ||||||||| |||||| ||||||||||||    
T  47264032 tgtaattacacagaattatgtgatttttacaaattattagc 47263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 116
Target Start/End: Complemental strand, 1076 - 1041
Alignment:
Q  81 ttacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||||||||||||||||||||||    
T  1076 ttacactgaattatgtaattttttcaaattattagc 1041  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 14576 - 14537
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  14576 tgtaattacactgaattatgtgattttttcaaattattag 14537  T

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Target: scaffold0260 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 1300 - 1347
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||    
T  1300 tcaaacccttgacaaaatccctggcaaaaggtcattattcttgtagtg 1347  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 46728 - 46690
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  46728 tgtaattacactgaattatgtgattttttcaaattatta 46690  T

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Target: scaffold0722 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 7045 - 7085
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    |||||||| ||| ||||||||||||||||||||||||||||    
T  7045 tgtaattatactaaattatgtaattttttcaaattattagc 7085  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 475 - 515
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  475 tgtaattacactgaattttgtgattttttcaaattattagc 515  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 70322 - 70286
Alignment:
Q  78 taattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||| |||||||||||||||||    
T  70322 taattacactgaattatgttattttttcaaattatta 70286  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 63819 - 63779
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattagc 116  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  63819 tgtaattgcactgaattatgtaattttctcaaattattagc 63779  T

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Target: scaffold0573 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 6921 - 6968
Alignment:
Q  30 tcaaacccttgtcaaaatccctggcaaaggctcattattcttgtagtg 77  Q
    |||||||||||||||||||||||||||| | | | |||||||||||||    
T  6921 tcaaacccttgtcaaaatccctggcaaaaggtaactattcttgtagtg 6968  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 17762 - 17801
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattattag 115  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  17762 tgtaattacactaaattatgtgattttttcaaattattag 17801  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 3862 - 3900
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  3862 tgtaattacactgaattatgtgatttttttaaattatta 3900  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 130528 - 130490
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  130528 tgtaattacactgaattatgtgattttttcaaactatta 130490  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 192262 - 192300
Alignment:
Q  76 tgtaattacactgaattatgtaattttttcaaattatta 114  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  192262 tgtaattacaccgaattatgtaattttctcaaattatta 192300  T

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Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 178831 - 178871
Alignment:
Q  76 tgtaattacactgaattatg-taattttttcaaattattag 115  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  178831 tgtaattacactgaattatgatgattttttcaaattattag 178871  T

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