View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0791_low_55 (Length: 345)
Name: NF0791_low_55
Description: NF0791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0791_low_55 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 89 - 337
Target Start/End: Complemental strand, 2745363 - 2745115
Alignment:
| Q |
89 |
catttcacttcttctacttgtgtcacagttgatagaaaccatggactgcatttattttcttccatttgcttcaaatcttttggtgtaataaatgctgctt |
188 |
Q |
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| T |
2745363 |
catttcacttcttctacttgtgtcacagttgatagaaaccatggactgcatttattttcttccatttgcttcaaatcttttggtgtaataaatgctgctt |
2745264 |
T |
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| Q |
189 |
tatctaaaaacctagcaaaattaggttaaattccattagtgacaattcatcatcaaaattgaacctatacaaaacataataatcaagactaaaatataaa |
288 |
Q |
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| T |
2745263 |
tatctaaaaacctagcaaaattaggttaaattccattagtgacaattcatcatcaaaattgaacctatacaaaacataataatcaagactaaaatataaa |
2745164 |
T |
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| Q |
289 |
gccatgtgattattttatgcaatcatataacaattatacaacctatgat |
337 |
Q |
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| T |
2745163 |
gtcatgtgattattttaagcaatcatataacaattatacaacctatgat |
2745115 |
T |
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