View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0791_low_86 (Length: 294)
Name: NF0791_low_86
Description: NF0791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0791_low_86 |
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Alignment Details
Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 54 - 239
Target Start/End: Original strand, 33501704 - 33501889
Alignment:
| Q |
54 |
cagagattaggcaataaagcgtccctatgaagatgctacattaggtacacactttcaatatgcaacagaaataatatcaatcactcccaaaaacacatgc |
153 |
Q |
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| T |
33501704 |
cagagattaggcaataaagcgtccctatgaagatgctacattaggtacacactttcaatatgcaacagaaataatatcaatcactcccaaaaacacatgc |
33501803 |
T |
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| Q |
154 |
catatgtcaaattgtcaatataatgccaaatgcaatcaattttcccaaattattacaggtgtgaacgtgttagtgttgtgtctgtg |
239 |
Q |
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| T |
33501804 |
catatgtcaaattgtcaatataatgccaaatgcaatcaattttcccaaattattacaggtgtgaacgtgttagtgttgtgtctgtg |
33501889 |
T |
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