View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0794_low_1 (Length: 597)

Name: NF0794_low_1
Description: NF0794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0794_low_1
NF0794_low_1
[»] chr8 (14 HSPs)
chr8 (199-363)||(17683697-17683861)
chr8 (199-363)||(17664541-17664705)
chr8 (218-363)||(39837482-39837627)
chr8 (229-365)||(4839713-4839849)
chr8 (228-363)||(17973565-17973700)
chr8 (234-364)||(39845541-39845671)
chr8 (218-363)||(30938282-30938427)
chr8 (228-363)||(25579742-25579877)
chr8 (218-363)||(1406993-1407138)
chr8 (235-363)||(26873541-26873669)
chr8 (235-363)||(26875991-26876119)
chr8 (51-102)||(17664393-17664444)
chr8 (51-102)||(17683549-17683600)
chr8 (269-363)||(4582204-4582298)
[»] chr2 (24 HSPs)
chr2 (199-365)||(20372214-20372380)
chr2 (199-363)||(20621518-20621682)
chr2 (218-363)||(14582925-14583070)
chr2 (218-363)||(15944477-15944622)
chr2 (218-363)||(15952992-15953137)
chr2 (218-363)||(35138593-35138738)
chr2 (218-363)||(35146929-35147074)
chr2 (218-363)||(41233764-41233909)
chr2 (218-363)||(38168277-38168422)
chr2 (218-363)||(42565849-42565994)
chr2 (218-363)||(42574473-42574618)
chr2 (218-335)||(35037884-35038001)
chr2 (254-363)||(44372705-44372814)
chr2 (254-363)||(44388616-44388725)
chr2 (269-363)||(17687369-17687463)
chr2 (252-363)||(25483601-25483712)
chr2 (252-363)||(25491207-25491318)
chr2 (51-102)||(20621788-20621839)
chr2 (238-363)||(35303737-35303862)
chr2 (269-364)||(27606616-27606710)
chr2 (269-363)||(24285696-24285790)
chr2 (269-363)||(42249426-42249520)
chr2 (237-314)||(18989312-18989389)
chr2 (269-363)||(34070575-34070669)
[»] chr5 (20 HSPs)
chr5 (363-557)||(22042553-22042746)
chr5 (217-363)||(29186197-29186343)
chr5 (228-364)||(20398565-20398701)
chr5 (228-363)||(20372843-20372978)
chr5 (218-363)||(1728079-1728224)
chr5 (218-364)||(43597966-43598112)
chr5 (218-364)||(43603458-43603604)
chr5 (218-364)||(43608950-43609096)
chr5 (218-363)||(24956766-24956911)
chr5 (218-363)||(24965229-24965374)
chr5 (228-363)||(23350006-23350141)
chr5 (218-364)||(28843939-28844085)
chr5 (218-363)||(28852550-28852695)
chr5 (231-363)||(31410890-31411022)
chr5 (236-363)||(31421789-31421916)
chr5 (252-363)||(19223555-19223666)
chr5 (238-284)||(17638318-17638364)
chr5 (238-284)||(23028007-23028053)
chr5 (239-285)||(23037923-23037969)
chr5 (51-97)||(19223811-19223857)
[»] scaffold0156 (1 HSPs)
scaffold0156 (228-363)||(35286-35421)
[»] chr7 (12 HSPs)
chr7 (218-363)||(10439937-10440082)
chr7 (218-363)||(4952317-4952462)
chr7 (218-363)||(13831500-13831645)
chr7 (218-363)||(13839531-13839676)
chr7 (218-363)||(18304312-18304457)
chr7 (218-363)||(12978455-12978600)
chr7 (238-363)||(21662962-21663088)
chr7 (269-363)||(30244775-30244869)
chr7 (302-363)||(4941581-4941642)
chr7 (269-363)||(30255413-30255506)
chr7 (237-292)||(1955691-1955746)
chr7 (269-363)||(30245568-30245662)
[»] chr4 (14 HSPs)
chr4 (218-363)||(27343611-27343756)
chr4 (218-363)||(4523600-4523745)
chr4 (218-363)||(12996476-12996621)
chr4 (228-363)||(8094212-8094347)
chr4 (228-363)||(8103018-8103153)
chr4 (217-363)||(21532224-21532369)
chr4 (235-363)||(52295604-52295732)
chr4 (238-363)||(12428418-12428543)
chr4 (237-363)||(33188766-33188891)
chr4 (290-363)||(10638328-10638400)
chr4 (218-263)||(10638406-10638451)
chr4 (269-308)||(12402907-12402946)
chr4 (238-363)||(3424331-3424454)
chr4 (239-284)||(25249599-25249644)
[»] chr3 (23 HSPs)
chr3 (218-363)||(8154564-8154709)
chr3 (218-364)||(50824351-50824497)
chr3 (218-364)||(50851363-50851509)
chr3 (218-363)||(41006556-41006701)
chr3 (218-363)||(41015336-41015481)
chr3 (228-363)||(14538534-14538670)
chr3 (217-364)||(28470137-28470283)
chr3 (218-363)||(27341254-27341400)
chr3 (218-363)||(2211239-2211384)
chr3 (228-363)||(9525364-9525499)
chr3 (228-363)||(9555038-9555173)
chr3 (238-363)||(17933655-17933780)
chr3 (238-363)||(17919199-17919324)
chr3 (237-361)||(43470492-43470615)
chr3 (238-363)||(16816145-16816268)
chr3 (299-363)||(17628265-17628329)
chr3 (269-363)||(21186747-21186841)
chr3 (269-359)||(18349560-18349650)
chr3 (268-363)||(18039011-18039106)
chr3 (269-363)||(30447-30541)
chr3 (269-363)||(8197667-8197761)
chr3 (237-284)||(31276593-31276640)
chr3 (237-278)||(16288692-16288733)
[»] chr1 (14 HSPs)
chr1 (218-363)||(3432810-3432955)
chr1 (218-363)||(31539954-31540099)
chr1 (218-363)||(31548523-31548668)
chr1 (228-363)||(32137684-32137819)
chr1 (218-363)||(35103984-35104129)
chr1 (228-363)||(41746622-41746758)
chr1 (238-363)||(29221429-29221553)
chr1 (238-363)||(44320132-44320257)
chr1 (238-290)||(28457629-28457681)
chr1 (239-321)||(51058330-51058411)
chr1 (269-363)||(21498869-21498963)
chr1 (238-291)||(8241438-8241491)
chr1 (240-284)||(13462775-13462819)
chr1 (239-284)||(22460026-22460071)
[»] chr6 (17 HSPs)
chr6 (228-363)||(33298085-33298219)
chr6 (234-363)||(15391547-15391676)
chr6 (218-364)||(5004060-5004206)
chr6 (228-363)||(13825703-13825838)
chr6 (228-363)||(30824459-30824594)
chr6 (218-364)||(35091596-35091742)
chr6 (228-364)||(25550294-25550430)
chr6 (218-363)||(11279837-11279982)
chr6 (235-363)||(5994699-5994827)
chr6 (218-361)||(25991852-25991995)
chr6 (218-363)||(25506461-25506606)
chr6 (218-363)||(23925335-23925481)
chr6 (227-304)||(26526631-26526708)
chr6 (272-363)||(13490193-13490284)
chr6 (311-364)||(5489132-5489185)
chr6 (271-363)||(11053702-11053794)
chr6 (237-296)||(14894939-14894998)
[»] scaffold0111 (1 HSPs)
scaffold0111 (218-363)||(33035-33180)
[»] scaffold0209 (1 HSPs)
scaffold0209 (218-363)||(4-149)
[»] scaffold0083 (1 HSPs)
scaffold0083 (235-363)||(15813-15941)
[»] scaffold0002 (1 HSPs)
scaffold0002 (228-363)||(121228-121363)
[»] scaffold0497 (1 HSPs)
scaffold0497 (237-363)||(10993-11119)
[»] scaffold0632 (1 HSPs)
scaffold0632 (235-363)||(4390-4518)
[»] scaffold0016 (1 HSPs)
scaffold0016 (228-363)||(23464-23600)
[»] scaffold0173 (1 HSPs)
scaffold0173 (228-363)||(859-994)
[»] scaffold0039 (1 HSPs)
scaffold0039 (252-363)||(40787-40898)
[»] scaffold0431 (1 HSPs)
scaffold0431 (238-363)||(139-264)
[»] scaffold0170 (1 HSPs)
scaffold0170 (237-363)||(7129-7255)
[»] scaffold0222 (1 HSPs)
scaffold0222 (238-363)||(20422-20547)
[»] scaffold0027 (2 HSPs)
scaffold0027 (217-295)||(65622-65701)
scaffold0027 (51-91)||(65470-65510)
[»] scaffold0315 (1 HSPs)
scaffold0315 (237-293)||(10595-10651)
[»] scaffold0015 (1 HSPs)
scaffold0015 (268-363)||(192528-192623)
[»] scaffold0290 (1 HSPs)
scaffold0290 (237-314)||(15760-15837)
[»] scaffold0991 (1 HSPs)
scaffold0991 (270-363)||(345-438)
[»] scaffold0048 (2 HSPs)
scaffold0048 (230-263)||(7587-7620)
scaffold0048 (291-364)||(7622-7695)
[»] scaffold0044 (2 HSPs)
scaffold0044 (270-363)||(81758-81851)
scaffold0044 (269-363)||(65509-65603)
[»] scaffold0007 (1 HSPs)
scaffold0007 (237-284)||(61371-61418)
[»] scaffold0863 (1 HSPs)
scaffold0863 (269-363)||(343-437)
[»] scaffold1380 (1 HSPs)
scaffold1380 (237-278)||(556-597)


Alignment Details
Target: chr8 (Bit Score: 133; Significance: 7e-69; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 199 - 363
Target Start/End: Original strand, 17683697 - 17683861
Alignment:
Q  199 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 298  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  17683697 gaaaataatgggaaagagaagggtccgactcggaataaaaaatgaggtacttcaaagtaacttctttgtcaaaatttcgtctgaaacgacgaaaattccc 17683796  T
Q  299 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17683797 gactctaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgaca 17683861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 199 - 363
Target Start/End: Original strand, 17664541 - 17664705
Alignment:
Q  199 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 298  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||| ||||||||||    
T  17664541 gaaaataatgggaaagagaagggtccgactcggaataaaaaatgaggtacttcaaagtaacttctttgtcaaaatttcgtctgaaacgatgaaaattccc 17664640  T
Q  299 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17664641 gactctaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgaca 17664705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 39837482 - 39837627
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39837482 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 39837581  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  39837582 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 39837627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 4839713 - 4839849
Alignment:
Q  229 cggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaag 328  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4839713 cggaatcaaaaatgaggtacttcaaagtaacttctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggtaag 4839812  T
Q  329 gatagagaaaagtggtcaaaatttgaggtatgacata 365  Q
     ||||||||||| |||||||||||| |||||||||||    
T  4839813 aatagagaaaagcggtcaaaatttggggtatgacata 4839849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 228 - 363
Target Start/End: Complemental strand, 17973700 - 17973565
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  17973700 tcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 17973601  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | |||||||||||||||||||||||| |||||||||    
T  17973600 gaatagagaaaagtggtcaaaatttggggtatgaca 17973565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 234 - 364
Target Start/End: Original strand, 39845541 - 39845671
Alignment:
Q  234 taaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatag 333  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||    
T  39845541 taaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaatag 39845640  T
Q  334 agaaaagtggtcaaaatttgaggtatgacat 364  Q
    || ||||||||||||||||| ||||||||||    
T  39845641 aggaaagtggtcaaaatttggggtatgacat 39845671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 30938427 - 30938282
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30938427 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 30938328  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  30938327 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 30938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 25579742 - 25579877
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  25579742 tcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 25579841  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | ||||| |||||||||||||||||  |||||||||    
T  25579842 gaatagataaaagtggtcaaaatttagggtatgaca 25579877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 1406993 - 1407138
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  1406993 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcacaactttaaaaatacgaata 1407092  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  1407093 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 1407138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 235 - 363
Target Start/End: Original strand, 26873541 - 26873669
Alignment:
Q  235 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 334  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| || ||| |||||    
T  26873541 aaaaaataaggtactttaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaatttccgacattacaaatacgaataaaatgggtaagaataga 26873640  T
Q  335 gaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||||||||| |||||||||    
T  26873641 gaaaagtggtcaaaatttggggtatgaca 26873669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 235 - 363
Target Start/End: Original strand, 26875991 - 26876119
Alignment:
Q  235 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 334  Q
    ||||||||||||| || |||||||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||||||||||||| || ||| |||||    
T  26875991 aaaaaatgaggtattttaaagtaacctctttgtcgaaatttcgtctgaaacgacaaaaatttccgacattaaaaatacgaataaaatgggtaagaataga 26876090  T
Q  335 gaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||||||||| |||||||||    
T  26876091 gaaaagtggtcaaaatttggggtatgaca 26876119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 17664393 - 17664444
Alignment:
Q  51 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17664393 gaaatttggaccactgcagaaaaccttcggacttattgacaacattgtacag 17664444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 17683549 - 17683600
Alignment:
Q  51 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17683549 gaaatttggaccactgcagaaaaccttcggacttattgacaacattgtacag 17683600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 4582298 - 4582204
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||| ||| |||| | ||| |||  ||||||| || ||| |||||  | ||  ||||||||||||||||||||||| ||||||||||    
T  4582298 gaaatttcgtctaaaatgacggacatttccggttttaaaagtatgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttaaggtatgaca 4582204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 7e-66; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 199 - 365
Target Start/End: Original strand, 20372214 - 20372380
Alignment:
Q  199 gaaaataatgggaaagagaagggtctgattcggaataaaaaa-tgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcc 297  Q
    ||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |    
T  20372214 gaaaataatgggaaagagaagggtccgactcggaataaaaaaatgaggtacttcaaagtaacct-tttgtcgaaatttcgtctgaaacgacgaaaatttc 20372312  T
Q  298 cgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacata 365  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  20372313 cgactttaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgacata 20372380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 199 - 363
Target Start/End: Complemental strand, 20621682 - 20621518
Alignment:
Q  199 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 298  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  20621682 gaaaataatgggaaagagaagggtctgactcagaataaaaaatgaggtacttcaaagtaacatctttgtcgaaattttgtctgaaacgacgaaaattccc 20621583  T
Q  299 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||| ||||| ||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  20621582 gacttcaaaaacacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 20621518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 14583070 - 14582925
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14583070 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 14582971  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  14582970 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 14582925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 15944477 - 15944622
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15944477 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 15944576  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  15944577 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 15944622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 15952992 - 15953137
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15952992 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 15953091  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  15953092 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 15953137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 35138738 - 35138593
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35138738 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35138639  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35138638 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35138593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 35147074 - 35146929
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35147074 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35146975  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35146974 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35146929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 41233764 - 41233909
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41233764 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41233863  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  41233864 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 41233909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 38168277 - 38168422
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38168277 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 38168376  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| ||||||||||||||||||||||||  ||||||||    
T  38168377 aaatgggtaagaatagagaaaagtggtcaaaatttggagtatgaca 38168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 42565849 - 42565994
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  42565849 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 42565948  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  42565949 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 42565994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 42574473 - 42574618
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  42574473 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 42574572  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  42574573 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 42574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 218 - 335
Target Start/End: Complemental strand, 35038001 - 35037884
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35038001 agggcctgactcggaataaaaaatgaggtatttcaaagtaacctctctatcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35037902  T
Q  318 aaataggcaaggatagag 335  Q
    |||| || ||| ||||||    
T  35037901 aaatgggtaagaatagag 35037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 44372814 - 44372705
Alignment:
Q  254 agtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttg 353  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||    
T  44372814 agtaacctctttgtcgaaatttcgtcttaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttg 44372715  T
Q  354 aggtatgaca 363  Q
     |||||||||    
T  44372714 gggtatgaca 44372705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 44388725 - 44388616
Alignment:
Q  254 agtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttg 353  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||    
T  44388725 agtaacctctttgtcgaaatttcgtcttaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttg 44388626  T
Q  354 aggtatgaca 363  Q
     |||||||||    
T  44388625 gggtatgaca 44388616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 17687369 - 17687463
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  17687369 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17687463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 363
Target Start/End: Complemental strand, 25483712 - 25483601
Alignment:
Q  252 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 351  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  25483712 aaagtaacctctctgtcgagatttcgtctgaaacgacgaaaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 25483613  T
Q  352 tgaggtatgaca 363  Q
    || |||||||||    
T  25483612 tggggtatgaca 25483601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 363
Target Start/End: Complemental strand, 25491318 - 25491207
Alignment:
Q  252 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 351  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  25491318 aaagtaacctctctgtcgagatttcgtctgaaacgacgaaaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 25491219  T
Q  352 tgaggtatgaca 363  Q
    || |||||||||    
T  25491218 tggggtatgaca 25491207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 20621839 - 20621788
Alignment:
Q  51 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20621839 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 20621788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 363
Target Start/End: Complemental strand, 35303862 - 35303737
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 337  Q
    ||||||||||||||||| |||||||| ||  |||||||||||||||||||||||| |||  | |||| |||||| ||||||||  || ||    ||||||    
T  35303862 aaatgaggtacttcaaattaacctctctgccgaaatttcgtctgaaacgacgaaatttcttggcttttaaaataagaataaaaggggtaaaatcagagaa 35303763  T
Q  338 aagtggtcaaaatttgaggtatgaca 363  Q
    || | ||||||||||| |||||||||    
T  35303762 aaatagtcaaaatttggggtatgaca 35303737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 269 - 364
Target Start/End: Original strand, 27606616 - 27606710
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    |||||||||||||| ||||| |||||||||| |||||||| |||||||||||| |  ||  |||||||||||| |||||||||||  |||||||||    
T  27606616 gaaatttcgtctgagacgac-aaaattcccgtctttaaaagtacgaataaaattgataaaaatagagaaaagtagtcaaaatttggagtatgacat 27606710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 24285790 - 24285696
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||| |||||||| ||||| ||   ||||||| |||||| |||||  | ||  ||| |||||||||||||||||||| |||||||||    
T  24285790 gaaatttcgtcttaaacgacggaaatttccagttttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatgaca 24285696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 42249426 - 42249520
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||| |||||||| | |||  ||| ||||||| ||||||  ||||  | ||  |||||||||||||||||||||||| |||||||||    
T  42249426 gaaatttcgtctaaaacgacggacattttcgattttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 42249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 18989312 - 18989389
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacga 314  Q
    |||||||||||||| |||||||||||| |   | ||||||||||||  |||| |||||||||| ||||||||| ||||    
T  18989312 aaaatgaggtacttgaaagtaacctctctaccgtaatttcgtctgatgcgacaaaaattcccggctttaaaaagacga 18989389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 34070575 - 34070669
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||| |||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  ||||||||||||| |||||||||| |||||||||    
T  34070575 gaaattttgtctaaaacgacggacattaccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgatcaaaatttggggtatgaca 34070669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 3e-65; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 363 - 557
Target Start/End: Complemental strand, 22042746 - 22042553
Alignment:
Q  363 ataactacatcatctttaactactctttccacttgaaatggctggatatcgtgatgtgcttaaaagacaagttctgggaggttttgaaactgtacatctt 462  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||    
T  22042746 ataactacatcatctttaacaactctttccacttcaaatggctggatatcgtgttgtacttaaaagacaaattctaggaggttttgaaactgtacatctt 22042647  T
Q  463 ccatatcaggtattctatattttcagttttcctaactgctaattttattttgttttactactctgcagtgttgttatacttcttcaatgtgcaca 557  Q
    |||||||||||||||||||||||||| |||||||||||||  |    | ||||| |||||||||||| |||||||||||||||||||||||||||    
T  22042646 ccatatcaggtattctatattttcagctttcctaactgct-ctgcactgttgttatactactctgcactgttgttatacttcttcaatgtgcaca 22042553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 217 - 363
Target Start/End: Original strand, 29186197 - 29186343
Alignment:
Q  217 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 316  Q
    ||||||| || |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29186197 aagggtccgactcggaataaaaaatgaggcacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 29186296  T
Q  317 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||| || |||||||||||||||||||||||||||| |||||||||    
T  29186297 aaaatgggtaaggatagagaaaagtggtcaaaatttggggtatgaca 29186343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 228 - 364
Target Start/End: Original strand, 20398565 - 20398701
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  20398565 tcggaataaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatcggtaa 20398664  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    | |||||||||||||||||||||||| ||||||||||    
T  20398665 gaatagagaaaagtggtcaaaatttggggtatgacat 20398701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 20372843 - 20372978
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  20372843 tcggaataaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatcggtaa 20372942  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | |||||||||||||||||||||||| |||||||||    
T  20372943 gaatagagaaaagtggtcaaaatttggggtatgaca 20372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 1728079 - 1728224
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1728079 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 1728178  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  1728179 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 1728224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 218 - 364
Target Start/End: Original strand, 43597966 - 43598112
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43597966 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43598065  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43598066 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43598112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 218 - 364
Target Start/End: Original strand, 43603458 - 43603604
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43603458 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43603557  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43603558 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43603604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 218 - 364
Target Start/End: Original strand, 43608950 - 43609096
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43608950 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43609049  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43609050 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43609096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 24956766 - 24956911
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24956766 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 24956865  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  24956866 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 24956911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 24965229 - 24965374
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24965229 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 24965328  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  24965329 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 24965374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 23350006 - 23350141
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||| |||||||||||||||||||||||||||||| || ||    
T  23350006 tcggaataaaaaatgaggtacttcaaagtaacctctttgccgaaatttcgtctgaaatgacgagaattcccgactttaaaaatacgaataaaatgggtaa 23350105  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
      |||||||||| ||||||||||||| |||||||||    
T  23350106 aaatagagaaaaatggtcaaaatttggggtatgaca 23350141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 28844085 - 28843939
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  28844085 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 28843986  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  28843985 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 28843939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 28852695 - 28852550
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  28852695 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 28852596  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  28852595 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 28852550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 231 - 363
Target Start/End: Complemental strand, 31411022 - 31410890
Alignment:
Q  231 gaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaagga 330  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||  |||||||||||||||||||||| ||  || |    
T  31411022 gaataaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgttttaaacgacgaaaattcctaactttaaaaatacgaataaaatgggttagaa 31410923  T
Q  331 tagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||| |||||||||||||| |||||||||    
T  31410922 tagagaaatgtggtcaaaatttggggtatgaca 31410890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 236 - 363
Target Start/End: Complemental strand, 31421916 - 31421789
Alignment:
Q  236 aaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagag 335  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| || ||| ||||||    
T  31421916 aaaaatgaggtacttcaaagtaacatctttgtcgaaattttgtctgaaacgacgaaaatttccgacttcaaaaatacgaataaaatgggtaagaatagag 31421817  T
Q  336 aaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||||||||  |||||||||    
T  31421816 aaaagtggtcaaaattttgggtatgaca 31421789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 252 - 363
Target Start/End: Complemental strand, 19223666 - 19223555
Alignment:
Q  252 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 351  Q
    |||||||||||| ||| || ||||| ||||||||||||| ||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  19223666 aaagtaacctctctgtcgagatttcatctgaaacgacgacaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 19223567  T
Q  352 tgaggtatgaca 363  Q
    || |||||||||    
T  19223566 tggggtatgaca 19223555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 17638364 - 17638318
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 284  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||    
T  17638364 aaatgaggtacttcaaagtaacctctctgtcgaaatttcgtttgaaa 17638318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 23028007 - 23028053
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 284  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||    
T  23028007 aaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaa 23028053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 23037969 - 23037923
Alignment:
Q  239 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaac 285  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  23037969 aatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaac 23037923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 19223857 - 19223811
Alignment:
Q  51 gaaatttggaccactgccgaaaaccttcggacttattgacaacattg 97  Q
    ||||||||||||  ||| |||||| ||||||||||||||||||||||    
T  19223857 gaaatttggacccttgctgaaaactttcggacttattgacaacattg 19223811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 35286 - 35421
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  35286 tcggaataaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 35385  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | |||||||||||||||||||||||| |||||||||    
T  35386 gaatagagaaaagtggtcaaaatttggggtatgaca 35421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 2e-57; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 10440082 - 10439937
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10440082 agggtctgactcggaataaaaaatgaggtactttaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 10439983  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| |||||| |||||||||||||||||||||||| |||||||||    
T  10439982 aaatgggcaagaatagagaaaagtggtcaaaatttggggtatgaca 10439937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 4952317 - 4952462
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||||||    
T  4952317 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 4952416  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| ||||| ||||||||||||||||||||||||||||    
T  4952417 aaatgggtaagaatagataaaagtggtcaaaatttgaggtatgaca 4952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 13831645 - 13831500
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13831645 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 13831546  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||| ||||||||||||||||  |||||||||    
T  13831545 aaatgggtaagaatagaggaaagtggtcaaaatttagggtatgaca 13831500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 13839676 - 13839531
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13839676 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 13839577  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| |  ||| |||||| ||||||||||||||||| |||||||||    
T  13839576 aaatggataagaatagaggaaagtggtcaaaatttggggtatgaca 13839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 18304312 - 18304457
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||| |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18304312 agggtccgactcgaaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 18304411  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  18304412 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 18304457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 12978600 - 12978455
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12978600 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 12978501  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  12978500 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 12978455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 238 - 363
Target Start/End: Original strand, 21662962 - 21663088
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttt-aaaaatacgaataaaataggcaaggatagaga 336  Q
    |||||||||||||||||||||||||  |||||||||||||||| |||||||||| | || || |||| ||||||||||||||||| || ||  | ||| |    
T  21662962 aaatgaggtacttcaaagtaacctccctgttgaaatttcgtctaaaacgacgaagactctcggctttaaaaaatacgaataaaatgggtaaaaacagata 21663061  T
Q  337 aaagtggtcaaaatttgaggtatgaca 363  Q
    |||||| |||||||||| |||||||||    
T  21663062 aaagtgatcaaaatttggggtatgaca 21663088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 30244869 - 30244775
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||| || ||||||| ||||||||||| ||||||||||||||||||||||| |  ||  ||||||||||||||||||||||||||||||||||    
T  30244869 gaaattacgactgaaacaacgaaaattcctgactttaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttgaggtatgaca 30244775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 302 - 363
Target Start/End: Original strand, 4941581 - 4941642
Alignment:
Q  302 tttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  4941581 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 4941642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 30255506 - 30255413
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||| || ||||||| ||||||||| | ||| | ||||||||||||||||| |  ||  |||||||||||||||||||||||| |||||||||    
T  30255506 gaaattacgactgaaacaacgaaaatttctgacatgaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttg-ggtatgaca 30255413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 1955691 - 1955746
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaa 292  Q
    |||||||||| |||||||||||||||| ||  ||||||| ||||||||||||||||    
T  1955691 aaaatgaggtgcttcaaagtaacctctctgccgaaattttgtctgaaacgacgaaa 1955746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 30245662 - 30245568
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||| || ||||||| ||||||||| | ||| | ||||||||||||||||| |  ||  |||||||||||||||||||| ||  |||||||||    
T  30245662 gaaattacgactgaaacaacgaaaatttctgacatgaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaaatttgggtatgaca 30245568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 2e-57; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 27343611 - 27343756
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27343611 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 27343710  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||  |||||||||||||||||||||||| |||||||||    
T  27343711 aaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 27343756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 4523600 - 4523745
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4523600 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 4523699  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| |  ||| |||||| ||||||||||||||||| |||||||||    
T  4523700 aaatggataagaatagaggaaagtggtcaaaatttggggtatgaca 4523745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 12996621 - 12996476
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12996621 agggactgactcggaataaaaaatgaggtacttcaaagtaacctctctaccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 12996522  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  12996521 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 12996476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 8094212 - 8094347
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  8094212 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 8094311  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | |||||||||||||||||||||||| |||||||||    
T  8094312 gaatagagaaaagtggtcaaaatttggggtatgaca 8094347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 8103018 - 8103153
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  8103018 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 8103117  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | |||||||||||||||||||||||| |||||||||    
T  8103118 gaatagagaaaagtggtcaaaatttggggtatgaca 8103153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 217 - 363
Target Start/End: Original strand, 21532224 - 21532369
Alignment:
Q  217 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 316  Q
    ||||||| || || |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21532224 aagggtccgactcagaataaaaaatgaggtacttcaaagtaatct-tttgtcgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaat 21532322  T
Q  317 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||| |  |||||||||||||||||||||||||||| |||||||||    
T  21532323 aaaatggataaggatagagaaaagtggtcaaaatttggggtatgaca 21532369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 235 - 363
Target Start/End: Complemental strand, 52295732 - 52295604
Alignment:
Q  235 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 334  Q
    |||||||||||||||||||||||| |||| ||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||    
T  52295732 aaaaaatgaggtacttcaaagtaatctctctgccgaaattttgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaataga 52295633  T
Q  335 gaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||||||||| |||||||||    
T  52295632 gaaaagtggtcaaaatttggggtatgaca 52295604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 238 - 363
Target Start/End: Original strand, 12428418 - 12428543
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 337  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||  ||||||||| | | ||||||||||||||||||||| || |   ||||||||    
T  12428418 aaatgaggtacttcaaagtaaactcttcgtcgaaatttcgtctgaaataacgaaaatttctggctttaaaaatacgaataaaatgggtagaaatagagaa 12428517  T
Q  338 aagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||||||| |||||||||    
T  12428518 aagtggtcaaaatttggggtatgaca 12428543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 363
Target Start/End: Complemental strand, 33188891 - 33188766
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 336  Q
    ||||||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||| |  |||||||||||| |||||||  |  ||  ||||| |    
T  33188891 aaaatgaggtaattcaaagtaaccttcttgctgaaatttcgtctgaaacgacgaaaattctcagctttaaaaatacaaataaaaaggataaaaataga-a 33188793  T
Q  337 aaagtggtcaaaatttgaggtatgaca 363  Q
    ||||| ||||||||||| |||||||||    
T  33188792 aaagttgtcaaaatttggggtatgaca 33188766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 10638400 - 10638328
Alignment:
Q  290 aaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||||||||| |||||||||||| || ||  |||||||||||||||||||||||| |||||||||    
T  10638400 aaaattcccgactttaaaa-tacgaataaaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 10638328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 10638451 - 10638406
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctct 263  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  10638451 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctct 10638406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 12402946 - 12402907
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaa 308  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  12402946 gaaatttcgtctgaaacgacgaaaattcctgactttaaaa 12402907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 363
Target Start/End: Complemental strand, 3424454 - 3424331
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 337  Q
    |||||||||||||||||||||||||  ||  ||||||||||||| |||||||||  |||  | |||| ||| || ||||||||  || ||   |||||||    
T  3424454 aaatgaggtacttcaaagtaacctc--tgccgaaatttcgtctggaacgacgaactttcttggcttttaaagtaagaataaaaggggtaaaattagagaa 3424357  T
Q  338 aagtggtcaaaatttgaggtatgaca 363  Q
    || || |||||||||| |||||||||    
T  3424356 aaatgatcaaaatttggggtatgaca 3424331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 25249599 - 25249644
Alignment:
Q  239 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 284  Q
    ||||||||||| ||||||||||||  |||||||||||||| |||||    
T  25249599 aatgaggtactccaaagtaacctccctgttgaaatttcgtttgaaa 25249644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 4e-55; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 8154564 - 8154709
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8154564 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 8154663  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  8154664 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 8154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 50824497 - 50824351
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50824497 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 50824398  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  50824397 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 50824351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 218 - 364
Target Start/End: Original strand, 50851363 - 50851509
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50851363 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 50851462  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  50851463 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 50851509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 41006701 - 41006556
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41006701 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41006602  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||| ||||||||||||| |||||||||    
T  41006601 aaatgggtaagaatagagaaaaatggtcaaaatttggggtatgaca 41006556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 41015481 - 41015336
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41015481 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41015382  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||| ||||||||||||| |||||||||    
T  41015381 aaatgggtaagaatagagaaaaatggtcaaaatttggggtatgaca 41015336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 14538534 - 14538670
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctcttt-gttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggca 326  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  |    
T  14538534 tcggaataaaaaatgaggtacttcaaagtaacctcttttgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatggata 14538633  T
Q  327 aggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    || |||||||||||||||||||||||| |||||||||    
T  14538634 agaatagagaaaagtggtcaaaatttggggtatgaca 14538670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 217 - 364
Target Start/End: Original strand, 28470137 - 28470283
Alignment:
Q  217 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 316  Q
    ||||||| || || |||||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  28470137 aagggtccgactcagaataaaaaatgaggtacttcatagtaatct-tttgtcgaaatttcgtctgaaacgacgaaaatttctgactttaaaaatacgaat 28470235  T
Q  317 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    ||||| |  |||||||||||||||||||||||||||| ||||||||||    
T  28470236 aaaatggataaggatagagaaaagtggtcaaaatttggggtatgacat 28470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 27341254 - 27341400
Alignment:
Q  218 agggtctgattcggaataaaa-aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 316  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27341254 agggcctgactcggaataaaaaaatgaggtacttcaaagtaacctttctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaat 27341353  T
Q  317 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||| |  ||| |||||||||||||||||||||||| |||||||||    
T  27341354 aaaatggataagaatagagaaaagtggtcaaaatttggggtatgaca 27341400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 2211384 - 2211239
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||| |||| |||||||||||||||||||| || ||| || ||||||||  |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  2211384 agggcctgactcggaataaaaaatgaggtattttaaaataccctctttgccgaaatttcgtcttaaacgacgaaaattcctgactttaaaaatacgaata 2211285  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||| ||| |||||||||||||||||||||||  |||||||||    
T  2211284 aaataggtaagaatagagaaaagtggtcaaaatttagggtatgaca 2211239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 9525364 - 9525499
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    |||||||||||||||||||| || |||||||||| | ||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||    
T  9525364 tcggaataaaaaatgaggtattttaaagtaacctttctgccgaaatttcgtctaaaacaacgaaaattcccgactttaaaaatacgaataaaatgggtaa 9525463  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | ||||||||||||| |||||||||| |||||||||    
T  9525464 gaatagagaaaagtgatcaaaatttggggtatgaca 9525499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 9555038 - 9555173
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    |||||||||||||||||||| || |||||||||| | ||  |||||||||||| |||| |||||||||||||||||||||||||||| |||||| || ||    
T  9555038 tcggaataaaaaatgaggtattttaaagtaacctttctgccgaaatttcgtctaaaacaacgaaaattcccgactttaaaaatacgagtaaaatgggtaa 9555137  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | ||||||||||||| |||||||||| |||||||||    
T  9555138 gaatagagaaaagtgatcaaaatttggggtatgaca 9555173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 238 - 363
Target Start/End: Complemental strand, 17933780 - 17933655
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 337  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||||  ||||||||| ||||||||||||||||||||||||| || ||  ||||||||    
T  17933780 aaatgaggtacttcaaagtaacctctccgaagaaatttcgtctgaaataacgaaaatttccgactttaaaaatacgaataaaatgggtaaaaatagagaa 17933681  T
Q  338 aagtggtcaaaatttgaggtatgaca 363  Q
    || ||||||||||||| |||||||||    
T  17933680 aattggtcaaaatttggggtatgaca 17933655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 363
Target Start/End: Complemental strand, 17919324 - 17919199
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 337  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||||  |||||||||  || ||||||||||||||||||||| |  ||  ||||||||    
T  17919324 aaatgaggtactttaaagtaacctctccgacgaaatttcgtctgaaataacgaaaattttcggctttaaaaatacgaataaaatggataaaaatagagaa 17919225  T
Q  338 aagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||||||| |||||||||    
T  17919224 aagtggtcaaaatttggggtatgaca 17919199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 361
Target Start/End: Original strand, 43470492 - 43470615
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 336  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||||  ||||||| || ||||||||||||||||||||  || ||  ||||| |    
T  43470492 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgaataaaattctcggctttaaaaatacgaataaaaagggtaaaaataga-a 43470590  T
Q  337 aaagtggtcaaaatttgaggtatga 361  Q
    ||||| ||||||||||| |||||||    
T  43470591 aaagtagtcaaaatttggggtatga 43470615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 238 - 363
Target Start/End: Original strand, 16816145 - 16816268
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 337  Q
    |||||||||||||||||||| |||||  ||  |||||||||||||||  ||||||||| ||| |||||||||||||||||||||  | ||  ||||||||    
T  16816145 aaatgaggtacttcaaagta-cctctccgtcaaaatttcgtctgaaataacgaaaatttccggctttaaaaatacgaataaaatgagtaaaaatagagaa 16816243  T
Q  338 aagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||||||| |||||||||    
T  16816244 aagtggtcaaaatttg-ggtatgaca 16816268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 363
Target Start/End: Complemental strand, 17628329 - 17628265
Alignment:
Q  299 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  17628329 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17628265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 21186841 - 21186747
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||| |||||| |||||||||| || |||||||| |||||||||||| |  ||  | ||| |||||||||||||||||| |||||||||    
T  21186841 gaaatttcgtttgaaacaacgaaaattctcggctttaaaagtacgaataaaatggataaaaacagataaaagtggtcaaaatttggggtatgaca 21186747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 269 - 359
Target Start/End: Complemental strand, 18349650 - 18349560
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtat 359  Q
    |||||||||||| |||||||| | ||| |||| ||||||| ||||||||||||  | ||  |||||||||||| ||||||||||| |||||    
T  18349650 gaaatttcgtctaaaacgacggacatttccgattttaaaagtacgaataaaatgtgtaaaaatagagaaaagttgtcaaaatttggggtat 18349560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 268 - 363
Target Start/End: Complemental strand, 18039106 - 18039011
Alignment:
Q  268 tgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||||||||| ||||   ||| || | || |||||||||||||||| || ||  |  ||||||||||||||||||||| |||||||||    
T  18039106 tgaaatttcgtctgaaacaacgatccttctcggcgtttaaaatacgaataaaatgggtaaaaagcgagaaaagtggtcaaaatttggggtatgaca 18039011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 30447 - 30541
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||| |||||||| | ||| |||  ||||||| ||| || |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  30447 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacaaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 30541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 8197667 - 8197761
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||| |||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  8197667 gaaattttgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 8197761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 31276640 - 31276593
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 284  Q
    |||||||||||||||||||||||||  |||| |||||||||| |||||    
T  31276640 aaaatgaggtacttcaaagtaaccttcttgtcgaaatttcgtttgaaa 31276593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 16288733 - 16288692
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgt 278  Q
    ||||||||||||||||||||||||||| ||  ||||||||||    
T  16288733 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgt 16288692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 4e-55; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 3432810 - 3432955
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3432810 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 3432909  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  3432910 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 3432955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 31540099 - 31539954
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31540099 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 31540000  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  31539999 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 31539954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 31548668 - 31548523
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31548668 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 31548569  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  31548568 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 31548523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 32137684 - 32137819
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  32137684 tcggaataaaaaatgaggtacttcaaagtaacttatttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatggataa 32137783  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | ||||||||||||| |||||||||| |||| ||||    
T  32137784 gaatagagaaaagtgatcaaaatttggggtaagaca 32137819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 35103984 - 35104129
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35103984 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccaactttaaaaatacgaata 35104083  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35104084 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35104129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 41746622 - 41746758
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctcttt-gttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggca 326  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |  |    
T  41746622 tcggaataaaaaatgaggtacttcaaagtaacctcttttgccgaaattttgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatggata 41746721  T
Q  327 aggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    || ||||| |||||||||||||||||| | |||||||    
T  41746722 agaatagataaaagtggtcaaaatttgggatatgaca 41746758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 238 - 363
Target Start/End: Original strand, 29221429 - 29221553
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 337  Q
    |||||||||| |||||| || ||||| ||  ||||||||||||||||   |||||||| ||||||||||||||||||||||||| || ||  ||||||||    
T  29221429 aaatgaggtatttcaaaata-cctctctgccgaaatttcgtctgaaatagcgaaaatttccgactttaaaaatacgaataaaatgggtaaaaatagagaa 29221527  T
Q  338 aagtggtcaaaatttgaggtatgaca 363  Q
    |||| ||||||||||| |||||||||    
T  29221528 aagtagtcaaaatttggggtatgaca 29221553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 363
Target Start/End: Original strand, 44320132 - 44320257
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 337  Q
    |||||||||||||  ||||||||||  || |||||||||||||||||||||||   ||| || | || |||||||||||||||| || ||  |  |||||    
T  44320132 aaatgaggtactttcaagtaacctccctgctgaaatttcgtctgaaacgacgatccttctcggcgtttaaaatacgaataaaatgggtaaaaagcgagaa 44320231  T
Q  338 aagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||||||| |||||||||    
T  44320232 aagtggtcaaaatttggggtatgaca 44320257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 28457681 - 28457629
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacga 290  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28457681 aaatgatgtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacga 28457629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 51058330 - 51058411
Alignment:
Q  239 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaat 321  Q
    ||||||||| |||||| || ||| | || ||||||||||| |||||| ||||||||||||  |||||||||||||||||||||    
T  51058330 aatgaggtatttcaaaata-cctttctgctgaaatttcgtttgaaacaacgaaaattcccagctttaaaaatacgaataaaat 51058411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 21498869 - 21498963
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||| |||||||| | ||| |||  ||||||| ||||||  ||||  | ||  |||||||||||||||||||||||| |||||||||    
T  21498869 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 21498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 8241438 - 8241491
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaa 291  Q
    ||||||||||||| |||||||||||| |   |||||||||||||||||||||||    
T  8241438 aaatgaggtactttaaagtaacctctctaccgaaatttcgtctgaaacgacgaa 8241491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 13462819 - 13462775
Alignment:
Q  240 atgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 284  Q
    |||||||||||||||||||||||||| |  |||||||||||||||    
T  13462819 atgaggtacttcaaagtaacctctttatccaaatttcgtctgaaa 13462775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 22460071 - 22460026
Alignment:
Q  239 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 284  Q
    ||||||||||| ||||||||||||| ||| |||||||||| |||||    
T  22460071 aatgaggtactccaaagtaacctctctgtcgaaatttcgtttgaaa 22460026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 6e-54; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 228 - 363
Target Start/End: Complemental strand, 33298219 - 33298085
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  33298219 tcggaataaaaaatgaggtacttcaaagtaac-tctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 33298121  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||||||||||||| ||| |||||||||    
T  33298120 ggatagagaaaagtggtcaaaagttggggtatgaca 33298085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 234 - 363
Target Start/End: Original strand, 15391547 - 15391676
Alignment:
Q  234 taaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatag 333  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||    
T  15391547 taaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcctggctttaaaaatacgaataaaatgggcaaggatag 15391646  T
Q  334 agaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||||||||||| | |||||||    
T  15391647 agaaaagtggtcaaaatttgggatatgaca 15391676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 5004206 - 5004060
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5004206 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 5004107  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  5004106 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 5004060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 228 - 363
Target Start/End: Complemental strand, 13825838 - 13825703
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  13825838 tcggaatcaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcctgactttaaaaatacgaataaaatgggtaa 13825739  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | ||||||||||||| |||||||||| |||||||||    
T  13825738 gaatagagaaaagtgatcaaaatttggggtatgaca 13825703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 30824459 - 30824594
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  30824459 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 30824558  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | |||||||||||||||||||||||| |||||||||    
T  30824559 gaatagagaaaagtggtcaaaatttggggtatgaca 30824594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 218 - 364
Target Start/End: Original strand, 35091596 - 35091742
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  35091596 agggtccgattcgaaataaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaatttccgactttaaaaatatgaata 35091695  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  35091696 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 35091742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 228 - 364
Target Start/End: Complemental strand, 25550430 - 25550294
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    |||||||||||||||||||||||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||    
T  25550430 tcggaataaaaaatgaggtacttcaaagtaacctctctgccaaaatttcgtttgaaacgacgaaaattcccgactttaaaaatatgaataaaatgggtaa 25550331  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    | |||||||||||||||||||||||| ||||||||||    
T  25550330 gaatagagaaaagtggtcaaaatttggggtatgacat 25550294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 11279982 - 11279837
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  11279982 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 11279883  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  11279882 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 11279837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 235 - 363
Target Start/End: Complemental strand, 5994827 - 5994699
Alignment:
Q  235 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 334  Q
    ||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||||    
T  5994827 aaaaaatgaggtacttcaaagtaacctctttgccaaaattttgtctgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggtaagaataga 5994728  T
Q  335 gaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||||||||| |||||||||    
T  5994727 gaaaagtggtcaaaatttggggtatgaca 5994699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 218 - 361
Target Start/End: Complemental strand, 25991995 - 25991852
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || || ||||||||||||||||||||||||||||||||| |   |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25991995 agggtccgactctgaataaaaaatgaggtacttcaaagtaacctctctaccgaaatttcttctgaaacgacgaaaattcccgactttaaaaatacgaata 25991896  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatga 361  Q
    |||| || ||| |||||||||||||||||| ||||| |||||||    
T  25991895 aaatgggtaagaatagagaaaagtggtcaacatttggggtatga 25991852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 25506461 - 25506606
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||| |||| ||||||| |||||||||||| || |||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25506461 agggcctgactcggaatcaaaaatgaggtattttaaagtaacctctctgccgaaatttcgtctaaaacgacgaaaattcccgactttaaaaatacgaata 25506560  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| ||||||||||||| |||||||||| |||||||||    
T  25506561 aaatgggtaagaatagagaaaagtgatcaaaatttggggtatgaca 25506606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 23925481 - 23925335
Alignment:
Q  218 agggtctgattcggaat-aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 316  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| ||| |   |||||||||||  ||| || ||||||||||||||||||||||||||||    
T  23925481 agggcctgactcggaatcaaaaaatgaggtacttcaaagtaacatctctaccgaaatttcgtcaaaaatgatgaaaattcccgactttaaaaatacgaat 23925382  T
Q  317 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||| || ||| |||||||||||||||||||||||| |||||||||    
T  23925381 aaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 23925335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 26526631 - 26526708
Alignment:
Q  227 ttcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttt 304  Q
    |||||||  |||||||||||| |||||||||||| || ||  || |||||||||||||||||||||||||||||||||    
T  26526631 ttcggaaccaaaaatgaggtaattcaaagtaaccactctgccgatatttcgtctgaaacgacgaaaattcccgacttt 26526708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 363
Target Start/End: Complemental strand, 13490284 - 13490193
Alignment:
Q  272 atttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| ||||||||  |||||||||||||  |||| | ||||||||||||| |  ||  |||||||||||||||||||||||| |||||||||    
T  13490284 attttgtctgaaataacgaaaattcccggttttacagatacgaataaaatggataaaaatagagaaaagtggtcaaaatttggggtatgaca 13490193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 5489132 - 5489185
Alignment:
Q  311 acgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    ||||||||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  5489132 acgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 5489185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 271 - 363
Target Start/End: Complemental strand, 11053794 - 11053702
Alignment:
Q  271 aatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaata-ggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||||  ||||||||||  |  ||||||||||||||||||||  || ||  ||||| |||||||||||||||||| |||||||||    
T  11053794 aatttcgtctgaaataacgaaaattctggt-tttaaaaatacgaataaaatttggtaaaaatagaaaaaagtggtcaaaatttggggtatgaca 11053702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 14894998 - 14894939
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattc 296  Q
    ||||||||||||||||||||||  ||||||  ||||| ||||||||| |||| |||||||    
T  14894998 aaaatgaggtacttcaaagtaatttctttgccgaaatatcgtctgaagcgacaaaaattc 14894939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 106; Significance: 9e-53; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 33180 - 33035
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33180 agggtccgactcggaataaaaaatgaggtactttaaagtaacctctttgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgtata 33081  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  33080 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 33035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 4 - 149
Alignment:
Q  218 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 317  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  4 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 103  T
Q  318 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  104 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 235 - 363
Target Start/End: Complemental strand, 15941 - 15813
Alignment:
Q  235 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 334  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||  |||||    
T  15941 aaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggtaaaaataga 15842  T
Q  335 gaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||||||||| |||||||||    
T  15841 gaaaagtggtcaaaatttggggtatgaca 15813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 228 - 363
Target Start/End: Complemental strand, 121363 - 121228
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    ||||||| ||||||||  |||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  121363 tcggaatcaaaaatgatttacttcaaagtaacctctctaccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 121264  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | |||||||||||||||||||||||| |||||||||    
T  121263 gaatagagaaaagtggtcaaaatttggggtatgaca 121228  T

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Target: scaffold0497 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 237 - 363
Target Start/End: Complemental strand, 11119 - 10993
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 336  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||| || ||| |||||||    
T  11119 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaacaatacgaataaaatgggtaagaatagaga 11020  T
Q  337 aaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||||||| |||||||||    
T  11019 aaagtggtcaaaatttggggtatgaca 10993  T

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Target: scaffold0632 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 235 - 363
Target Start/End: Complemental strand, 4518 - 4390
Alignment:
Q  235 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 334  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| || ||| |||||    
T  4518 aaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgatgaaaattaccgactttaaaaatatgaataaaatgggtaagaataga 4419  T
Q  335 gaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||   ||||||||||| |||||||||    
T  4418 gaaaaaatgtcaaaatttggggtatgaca 4390  T

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Target: scaffold0016 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 228 - 363
Target Start/End: Complemental strand, 23600 - 23464
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttta-aaaatacgaataaaataggca 326  Q
    ||||||| |||||||||||||||||||||||||||| |   ||||||||||| |||| || ||||||||||||||||| |||||||||||||||| || |    
T  23600 tcggaatcaaaaatgaggtacttcaaagtaacctctctaccgaaatttcgtcagaaatgatgaaaattcccgactttaaaaaatacgaataaaatgggta 23501  T
Q  327 aggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    || |||||||||||||||||||||||| |||||||||    
T  23500 agaatagagaaaagtggtcaaaatttggggtatgaca 23464  T

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Target: scaffold0173 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 859 - 994
Alignment:
Q  228 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 327  Q
    ||||||| |||||||||||| ||||||||||||| | ||  ||||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||    
T  859 tcggaatcaaaaatgaggtatttcaaagtaacctttctgccgaaatttcgtctgaaacgacgaaaattcccagctttaaaaatacgaataaaatgggtaa 958  T
Q  328 ggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    | |||||||||  ||||||||||||| |||||||||    
T  959 gaatagagaaagctggtcaaaatttggggtatgaca 994  T

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Target: scaffold0039 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 363
Target Start/End: Original strand, 40787 - 40898
Alignment:
Q  252 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 351  Q
    |||||||||||||||| || |||||||||||||||| |||||| | |||||||||||||||||||||||| |  ||| ||||||||||||||||||||||    
T  40787 aaagtaacctctttgtcgagatttcgtctgaaacgatgaaaatgctcgactttaaaaatacgaataaaatggataagaatagagaaaagtggtcaaaatt 40886  T
Q  352 tgaggtatgaca 363  Q
    || |||||||||    
T  40887 tggggtatgaca 40898  T

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Target: scaffold0431 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 238 - 363
Target Start/End: Complemental strand, 264 - 139
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 337  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||  ||||||||| | | ||||||||||||||||||||| || |   ||||||||    
T  264 aaatgaggtacttcaaagtaaactcttcgtcgaaatttcgtctgaaataacgaaaatttctggctttaaaaatacgaataaaatgggtagaaatagagaa 165  T
Q  338 aagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||||||| |||||||||    
T  164 aagtggtcaaaatttggggtatgaca 139  T

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Target: scaffold0170 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 363
Target Start/End: Original strand, 7129 - 7255
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 336  Q
    |||||||||||||||||||||||||   |   ||||||||||||||||| |||||||||| || |||||||| ||| |||||||| || ||  | |||||    
T  7129 aaaatgaggtacttcaaagtaaccttcctcccgaaatttcgtctgaaacaacgaaaattctcggctttaaaagtacaaataaaatgggtaaaaacagaga 7228  T
Q  337 aaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||||||  |||||||||    
T  7229 aaagtggtcaaaatttagggtatgaca 7255  T

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Target: scaffold0222 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 363
Target Start/End: Original strand, 20422 - 20547
Alignment:
Q  238 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 337  Q
    |||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||||| || |||||||| |||||| |||||  | ||    | ||||    
T  20422 aaatgaggtactccaaagtaacctctctgccgaaatttcgtctgaaacaacgaaaattctcggctttaaaagtacgaacaaaatgtgtaaaaccatagaa 20521  T
Q  338 aagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||||||| |||||||||    
T  20522 aagtggtcaaaatttggggtatgaca 20547  T

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Target: scaffold0027 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 65622 - 65701
Alignment:
Q  217 aagggtctgattcggaataaaa-aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaatt 295  Q
    ||||||| || ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||    
T  65622 aagggtccgactcggaataaaaaaatgaggtacttcaaagtaacatctttgtcgaaatttcgtccgaaacaacgaaaatt 65701  T

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Target: scaffold0027; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 65470 - 65510
Alignment:
Q  51 gaaatttggaccactgccgaaaaccttcggacttattgaca 91  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  65470 gaaatttggaccactgccgaaaactttcggactcattgaca 65510  T

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Target: scaffold0315 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 10595 - 10651
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaa 293  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  10595 aaaatgaggtacttcaaagtaacctctttgccgaaatttcgtctgaagcgacgaaaa 10651  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 363
Target Start/End: Complemental strand, 192623 - 192528
Alignment:
Q  268 tgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  192623 tgaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatctgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 192528  T

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Target: scaffold0290 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 15760 - 15837
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacga 314  Q
    ||||||||||||||||||||||||| | |   | ||||||||||||| ||||||||||||| | ||||||||| ||||    
T  15760 aaaatgaggtacttcaaagtaacctatctaccgtaatttcgtctgaagcgacgaaaattcctggctttaaaaagacga 15837  T

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Target: scaffold0991 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 270 - 363
Target Start/End: Original strand, 345 - 438
Alignment:
Q  270 aaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  345 aaatttcgtctaaaacgatggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 438  T

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Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 7587 - 7620
Alignment:
Q  230 ggaataaaaaatgaggtacttcaaagtaacctct 263  Q
    ||||||||||||||||||||||||||||||||||    
T  7587 ggaataaaaaatgaggtacttcaaagtaacctct 7620  T

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Target: scaffold0048; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 7622 - 7695
Alignment:
Q  291 aaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 364  Q
    ||||||| |||||||||||    || ||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  7622 aaattcctgactttaaaaaatgcaaaaaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 7695  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 270 - 363
Target Start/End: Original strand, 81758 - 81851
Alignment:
Q  270 aaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    ||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||  |||||||||    
T  81758 aaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttagggtatgaca 81851  T

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Target: scaffold0044; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 65509 - 65603
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||  ||||||||| |||||||||    
T  65509 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgtacaaaatttggggtatgaca 65603  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 61418 - 61371
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 284  Q
    ||||||||||||||||||||||||||| || |||||||| || |||||    
T  61418 aaaatgaggtacttcaaagtaacctctatgctgaaattttgtttgaaa 61371  T

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Target: scaffold0863 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 343 - 437
Alignment:
Q  269 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 363  Q
    |||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||  | ||  ||| |||||||||||||||||||| |||||||||    
T  343 gaaatttcgtctaaaacgatggacatttccggttttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatgaca 437  T

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Target: scaffold1380 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1380
Description:

Target: scaffold1380; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 597 - 556
Alignment:
Q  237 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgt 278  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||    
T  597 aaaatgaggtactccaaagtaacctctctgtcgaaatttcgt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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