View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0795_high_15 (Length: 390)

Name: NF0795_high_15
Description: NF0795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0795_high_15
NF0795_high_15
[»] chr3 (22 HSPs)
chr3 (16-357)||(9606879-9607224)
chr3 (17-97)||(9601460-9601539)
chr3 (311-361)||(40272944-40272994)
chr3 (312-361)||(13730736-13730785)
chr3 (312-361)||(52926342-52926391)
chr3 (311-357)||(8247825-8247871)
chr3 (311-357)||(16735416-16735462)
chr3 (312-361)||(4495796-4495845)
chr3 (312-357)||(6411957-6412002)
chr3 (311-352)||(7697026-7697067)
chr3 (312-357)||(10870087-10870132)
chr3 (313-361)||(25517305-25517353)
chr3 (312-352)||(46421178-46421218)
chr3 (311-357)||(1217065-1217111)
chr3 (310-344)||(12525384-12525418)
chr3 (312-345)||(12914183-12914216)
chr3 (311-351)||(9276249-9276289)
chr3 (315-354)||(23871418-23871457)
chr3 (313-352)||(29366863-29366902)
chr3 (315-357)||(21874999-21875041)
chr3 (311-357)||(22609742-22609787)
chr3 (311-357)||(39203491-39203537)
[»] chr5 (15 HSPs)
chr5 (311-361)||(41014272-41014322)
chr5 (312-361)||(24448844-24448893)
chr5 (312-357)||(35710267-35710312)
chr5 (310-357)||(38879533-38879580)
chr5 (315-361)||(4619238-4619284)
chr5 (311-361)||(22600407-22600457)
chr5 (312-357)||(1565385-1565430)
chr5 (312-350)||(19438703-19438741)
chr5 (311-361)||(23974734-23974783)
chr5 (311-357)||(37024690-37024736)
chr5 (315-357)||(43334159-43334201)
chr5 (313-357)||(2838733-2838777)
chr5 (312-352)||(8170123-8170163)
chr5 (311-350)||(41956885-41956924)
chr5 (309-357)||(22861802-22861850)
[»] chr2 (22 HSPs)
chr2 (311-361)||(25079850-25079900)
chr2 (312-361)||(8455448-8455497)
chr2 (314-361)||(11514392-11514439)
chr2 (311-357)||(14530271-14530317)
chr2 (311-357)||(39189557-39189603)
chr2 (312-357)||(12024054-12024099)
chr2 (312-360)||(9671134-9671182)
chr2 (310-357)||(21779395-21779442)
chr2 (311-358)||(22371010-22371057)
chr2 (311-357)||(23397719-23397765)
chr2 (312-361)||(17705449-17705498)
chr2 (313-357)||(10543653-10543697)
chr2 (313-357)||(14544018-14544062)
chr2 (318-357)||(27573581-27573620)
chr2 (317-352)||(39499355-39499390)
chr2 (314-352)||(17896215-17896253)
chr2 (315-357)||(25249873-25249915)
chr2 (312-362)||(27466261-27466311)
chr2 (312-361)||(5840982-5841031)
chr2 (312-357)||(7214488-7214533)
chr2 (313-357)||(24200761-24200805)
chr2 (312-352)||(26684763-26684803)
[»] chr8 (20 HSPs)
chr8 (312-361)||(7136661-7136710)
chr8 (312-361)||(35261633-35261682)
chr8 (311-361)||(28817758-28817808)
chr8 (311-357)||(30454231-30454277)
chr8 (311-361)||(36720749-36720799)
chr8 (312-357)||(12670384-12670429)
chr8 (311-351)||(39461138-39461178)
chr8 (310-357)||(13160654-13160701)
chr8 (309-352)||(40605046-40605089)
chr8 (311-361)||(25250475-25250525)
chr8 (311-352)||(2626472-2626513)
chr8 (311-352)||(17823529-17823570)
chr8 (312-357)||(20869632-20869677)
chr8 (311-352)||(23286434-23286475)
chr8 (312-357)||(24245405-24245450)
chr8 (312-361)||(29521817-29521866)
chr8 (312-361)||(44530103-44530152)
chr8 (321-361)||(28407379-28407419)
chr8 (312-345)||(42840863-42840896)
chr8 (312-352)||(45071219-45071259)
[»] chr7 (26 HSPs)
chr7 (311-360)||(2541153-2541202)
chr7 (312-357)||(21172143-21172188)
chr7 (312-361)||(42798623-42798672)
chr7 (311-357)||(32758214-32758260)
chr7 (311-361)||(35334946-35334996)
chr7 (311-361)||(42805477-42805527)
chr7 (311-357)||(48735257-48735303)
chr7 (312-361)||(46354148-46354197)
chr7 (312-357)||(47077989-47078034)
chr7 (313-361)||(18326989-18327037)
chr7 (311-350)||(42495978-42496017)
chr7 (315-357)||(29140496-29140538)
chr7 (316-357)||(14732958-14732999)
chr7 (312-361)||(21447544-21447593)
chr7 (312-357)||(22699106-22699151)
chr7 (311-352)||(34626348-34626389)
chr7 (312-357)||(43557426-43557471)
chr7 (313-357)||(5180293-5180337)
chr7 (312-359)||(2663065-2663112)
chr7 (311-353)||(12473257-12473299)
chr7 (312-357)||(7193039-7193084)
chr7 (311-352)||(42476826-42476867)
chr7 (312-361)||(47716413-47716462)
chr7 (317-361)||(7794638-7794682)
chr7 (313-357)||(8149082-8149126)
chr7 (313-361)||(45019008-45019056)
[»] chr4 (24 HSPs)
chr4 (308-357)||(5648209-5648258)
chr4 (311-357)||(6430761-6430807)
chr4 (311-357)||(20224937-20224983)
chr4 (311-357)||(48598959-48599005)
chr4 (312-357)||(10660358-10660403)
chr4 (312-357)||(10874503-10874548)
chr4 (312-361)||(13256529-13256578)
chr4 (312-361)||(20405047-20405096)
chr4 (312-361)||(21646918-21646967)
chr4 (312-357)||(23501747-23501792)
chr4 (311-357)||(5306799-5306845)
chr4 (311-357)||(14590790-14590836)
chr4 (319-361)||(16408735-16408777)
chr4 (311-345)||(30639333-30639367)
chr4 (312-357)||(11054282-11054327)
chr4 (315-352)||(16911519-16911556)
chr4 (315-352)||(18969698-18969735)
chr4 (312-357)||(47528664-47528709)
chr4 (312-361)||(55766598-55766647)
chr4 (312-352)||(55830862-55830902)
chr4 (315-357)||(17315434-17315476)
chr4 (315-352)||(5313135-5313172)
chr4 (312-345)||(37494805-37494838)
chr4 (317-345)||(30352739-30352767)
[»] scaffold0057 (1 HSPs)
scaffold0057 (311-357)||(24903-24949)
[»] chr1 (27 HSPs)
chr1 (311-357)||(34725232-34725278)
chr1 (312-357)||(18944620-18944665)
chr1 (312-361)||(20004224-20004273)
chr1 (312-357)||(22930203-22930248)
chr1 (311-352)||(34714599-34714640)
chr1 (312-361)||(46991781-46991830)
chr1 (312-352)||(10668197-10668237)
chr1 (314-357)||(40424721-40424764)
chr1 (311-357)||(14617014-14617060)
chr1 (311-357)||(19932888-19932934)
chr1 (312-350)||(32632699-32632737)
chr1 (312-357)||(45812671-45812716)
chr1 (312-357)||(46248089-46248134)
chr1 (312-357)||(47214488-47214533)
chr1 (317-357)||(18742097-18742137)
chr1 (309-357)||(27474255-27474303)
chr1 (310-357)||(8197018-8197065)
chr1 (317-352)||(45402077-45402112)
chr1 (313-359)||(21723642-21723688)
chr1 (315-357)||(25290143-25290185)
chr1 (318-352)||(30395869-30395903)
chr1 (311-357)||(41319942-41319988)
chr1 (312-361)||(4430158-4430207)
chr1 (312-357)||(38478416-38478461)
chr1 (311-339)||(4349675-4349703)
chr1 (312-352)||(10163736-10163776)
chr1 (318-354)||(12126974-12127010)
[»] scaffold0168 (1 HSPs)
scaffold0168 (312-357)||(30533-30578)
[»] chr6 (10 HSPs)
chr6 (312-357)||(1346918-1346963)
chr6 (312-357)||(1354891-1354936)
chr6 (314-357)||(3815213-3815256)
chr6 (311-345)||(8409196-8409230)
chr6 (311-361)||(14975212-14975262)
chr6 (312-361)||(1941809-1941858)
chr6 (312-350)||(33922971-33923009)
chr6 (312-345)||(15866185-15866218)
chr6 (316-357)||(24734591-24734632)
chr6 (315-351)||(12063424-12063460)
[»] scaffold0024 (1 HSPs)
scaffold0024 (311-357)||(83828-83874)
[»] scaffold0005 (1 HSPs)
scaffold0005 (311-357)||(226542-226588)
[»] scaffold0258 (1 HSPs)
scaffold0258 (314-357)||(13159-13202)
[»] scaffold0187 (4 HSPs)
scaffold0187 (311-357)||(8898-8944)
scaffold0187 (315-357)||(10184-10226)
scaffold0187 (311-357)||(19226-19272)
scaffold0187 (315-357)||(20512-20554)
[»] scaffold0311 (1 HSPs)
scaffold0311 (321-361)||(10773-10813)
[»] scaffold0018 (1 HSPs)
scaffold0018 (320-352)||(73002-73034)


Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 16 - 357
Target Start/End: Original strand, 9606879 - 9607224
Alignment:
Q  16 atgaacaccagaagaactattactaagatgccaacagaaaaaacagaaactaaactcttagataaacgtgttgatggagcaaaatgtagcagcgggcatg 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  9606879 atgaacaccagaagaactattactaagatgccaatagaaaaaacagaaacaaaactcttagataaacgtgttgatggagcaaaatgcagcagcgagcatg 9606978  T
Q  116 actacaacatattcttctcaaaacagtcccactacctacagatagcaatccgaccgctaccgcgtcaatctaaaatcccagggccgaaacaaaccagagg 215  Q
    | ||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9606979 aatacaacatattctgctcaaaacagtcccagtgcctaccgatagcaatccgaccgctacctcgtcaatctaaaatcccagggccgaaacaaaccagagg 9607078  T
Q  216 gttcaacagccac----tatctaaaagaataattgaactcttttaccttatccttaacaattctctaggacaatataaatttgatcaagagtcatcatgt 311  Q
    |||||||| ||||    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  9607079 gttcaacaaccactatatatctaaaagaataattgaactcttttaccttatccttaacaattcttcaggacaatataaatttgatcaagagtcatcatgt 9607178  T
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||    
T  9607179 gaggggtaaccttggcgcaacttgtaaagttgttgtcatgtgactg 9607224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 9601460 - 9601539
Alignment:
Q  17 tgaacaccagaagaactattactaagatgccaacagaaaaaacagaaactaaactcttagataaacgtgttgatggagcaa 97  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  9601460 tgaacaccagaacaactattactaagatgccaacagaataaacagaaac-aaactcttagataaacgtgttgacggagcaa 9601539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 40272994 - 40272944
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  40272994 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 40272944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 13730785 - 13730736
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  13730785 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 13730736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 52926391 - 52926342
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  52926391 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 52926342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 8247871 - 8247825
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  8247871 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 8247825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 16735416 - 16735462
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  16735416 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 16735462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 4495845 - 4495796
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||||||||    
T  4495845 gaggggtaaccttcgcgcaactggtaaagttgttgtcatgtgactggaag 4495796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 6412002 - 6411957
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||    
T  6412002 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtaactg 6411957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 352
Target Start/End: Complemental strand, 7697067 - 7697026
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  7697067 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgt 7697026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 10870132 - 10870087
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  10870132 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 10870087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 25517353 - 25517305
Alignment:
Q  313 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  25517353 agggataaccttggcgcaactggtaaagttgttgtcatgtgactggaag 25517305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 352
Target Start/End: Complemental strand, 46421218 - 46421178
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  46421218 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 46421178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 1217065 - 1217111
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||    
T  1217065 tgaggggtaaccttggcgcaactggtaaagttgtagtcatgtcactg 1217111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 344
Target Start/End: Original strand, 12525384 - 12525418
Alignment:
Q  310 gtgaggggtaaccttggcgcaactggtaaagttgt 344  Q
    |||||||||||||||||||||||||||||||||||    
T  12525384 gtgaggggtaaccttggcgcaactggtaaagttgt 12525418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 345
Target Start/End: Complemental strand, 12914216 - 12914183
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgtt 345  Q
    ||||||||||||||||||||||||||||||||||    
T  12914216 gaggggtaaccttggcgcaactggtaaagttgtt 12914183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 351
Target Start/End: Original strand, 9276249 - 9276289
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatg 351  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  9276249 tgaggggtaaccttggcgcaactagtaaagttgttgtcatg 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 354
Target Start/End: Original strand, 23871418 - 23871457
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgtaa 354  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  23871418 gggtaaccttggcgcaactagtaaagttgttgtcatgtaa 23871457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 352
Target Start/End: Complemental strand, 29366902 - 29366863
Alignment:
Q  313 aggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  29366902 aggggtaaccttggcgtaactggtaaagttgttgtcatgt 29366863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 357
Target Start/End: Original strand, 21874999 - 21875041
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||    
T  21874999 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactg 21875041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 22609742 - 22609787
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||| |||||||||||| |||||| ||||    
T  22609742 tgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactg 22609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 39203491 - 39203537
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||| ||||| ||||||||||| |||||| ||||    
T  39203491 tgaggggtaaccttggcacaacttgtaaagttgttgtcatgtgactg 39203537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 41014272 - 41014322
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  41014272 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 41014322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 24448844 - 24448893
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  24448844 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 24448893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 35710267 - 35710312
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  35710267 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactg 35710312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 38879533 - 38879580
Alignment:
Q  310 gtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  38879533 gtgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 38879580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 361
Target Start/End: Complemental strand, 4619284 - 4619238
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  4619284 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 4619238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 22600407 - 22600457
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  22600407 tgaggggtaaccttgacgtaactggtaaagttgttatcatgtgactggaag 22600457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 1565385 - 1565430
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  1565385 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 1565430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 19438703 - 19438741
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcat 350  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  19438703 gaggggtaaccttggcgcaactggtaaagttgttgtcat 19438741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 23974734 - 23974783
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  23974734 tgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactggaag 23974783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 37024736 - 37024690
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||    
T  37024736 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactg 37024690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 357
Target Start/End: Original strand, 43334159 - 43334201
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  43334159 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 43334201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 2838733 - 2838777
Alignment:
Q  313 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||    
T  2838733 aggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactg 2838777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 352
Target Start/End: Complemental strand, 8170163 - 8170123
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    ||||| |||||||||||||||||||||||||||| ||||||    
T  8170163 gagggctaaccttggcgcaactggtaaagttgttgtcatgt 8170123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 350
Target Start/End: Original strand, 41956885 - 41956924
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcat 350  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  41956885 tgaggggtaacattggcgcaactggtaaagttgttgtcat 41956924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 357
Target Start/End: Complemental strand, 22861850 - 22861802
Alignment:
Q  309 tgtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||| ||||||||||||| |||||| |||||||||| |||||| ||||    
T  22861850 tgtgaagggtaaccttggcacaactgataaagttgttgtcatgtgactg 22861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 25079900 - 25079850
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  25079900 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 25079850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 8455497 - 8455448
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  8455497 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 8455448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 11514392 - 11514439
Alignment:
Q  314 ggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  11514392 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 11514439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 14530271 - 14530317
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  14530271 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 14530317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 39189603 - 39189557
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  39189603 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 39189557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 12024099 - 12024054
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  12024099 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 12024054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 9671134 - 9671182
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaa 360  Q
    ||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  9671134 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactggaa 9671182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 21779442 - 21779395
Alignment:
Q  310 gtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  21779442 gtgaggggtaaccttggcgcaactggtgaagttgttgtcatgtgactg 21779395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 22371010 - 22371057
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactgg 358  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||||    
T  22371010 tgaggggtaaccttggcccaactggtaaagttgttgtcatgtgactgg 22371057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 23397719 - 23397765
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||    
T  23397719 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactg 23397765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 17705449 - 17705498
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||| ||||    
T  17705449 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactagaag 17705498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 10543653 - 10543697
Alignment:
Q  313 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||    
T  10543653 aggggtaaccttggcgcaactgataaagttgttgtcatgtgactg 10543697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 14544018 - 14544062
Alignment:
Q  313 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||    
T  14544018 aggggtaaccttggcgcaattggtaaagttgttgtcatgtgactg 14544062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 27573581 - 27573620
Alignment:
Q  318 taaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactg 27573620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 39499390 - 39499355
Alignment:
Q  317 gtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||| |||||||||||||||||||||||||||||||    
T  39499390 gtaatcttggcgcaactggtaaagttgttatcatgt 39499355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 17896215 - 17896253
Alignment:
Q  314 ggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  17896215 ggggtaaccttgacgcaactggtaaagttgttgtcatgt 17896253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 357
Target Start/End: Complemental strand, 25249915 - 25249873
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||    
T  25249915 gggtaaccttggcgcaattggtaaagttgttgtcatgtgactg 25249873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 27466311 - 27466261
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaagt 362  Q
    |||| ||||| ||||||||||||||||||||||| |||||| |||| ||||    
T  27466311 gaggcgtaacattggcgcaactggtaaagttgttgtcatgtgactgaaagt 27466261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 5840982 - 5841031
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||| |||| || |||||||||| |||||| ||||||||    
T  5840982 gaggggtaaccttggtgcaaatgataaagttgttgtcatgtgactggaag 5841031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 7214488 - 7214533
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||| ||||| ||||||||||||||||| |||||| ||||    
T  7214488 gaggggtaactttggcacaactggtaaagttgttgtcatgtgactg 7214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 24200805 - 24200761
Alignment:
Q  313 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||  |||||||||||||||||| |||||| ||||    
T  24200805 aggggtaaccttgatgcaactggtaaagttgttgtcatgtgactg 24200761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 352
Target Start/End: Complemental strand, 26684803 - 26684763
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||| || |||||||||||||||||||| ||||||    
T  26684803 gaggggtaactttagcgcaactggtaaagttgttgtcatgt 26684763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 7136710 - 7136661
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  7136710 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 7136661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 35261633 - 35261682
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  35261633 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 35261682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 28817808 - 28817758
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  28817808 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaag 28817758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 30454277 - 30454231
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  30454277 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 30454231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 36720749 - 36720799
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  36720749 tgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaag 36720799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 12670429 - 12670384
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  12670429 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 12670384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 351
Target Start/End: Complemental strand, 39461178 - 39461138
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatg 351  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  39461178 tgaggggtaaccttggcgcaactggtaaagttgttgtcatg 39461138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 13160654 - 13160701
Alignment:
Q  310 gtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  13160654 gtgaggggtaacctcggcgcaactggtaaagttgttgtcatgtgactg 13160701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 352
Target Start/End: Complemental strand, 40605089 - 40605046
Alignment:
Q  309 tgtgaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||    
T  40605089 tgtgaggggtaactttggcgcaactggtaaagttgttgtcatgt 40605046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 25250475 - 25250525
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||| |||||||||||| ||||||||||||||||| |||||| ||||||||    
T  25250475 tgagaggtaaccttggcacaactggtaaagttgttgtcatgtgactggaag 25250525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 352
Target Start/End: Original strand, 2626472 - 2626513
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  2626472 tgaggggtaaccttggcgcaattggtaaagttgttgtcatgt 2626513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 352
Target Start/End: Original strand, 17823529 - 17823570
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  17823529 tgaggggtaatcttggcgcaactggtaaagttgttgtcatgt 17823570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 20869677 - 20869632
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||    
T  20869677 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactg 20869632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 352
Target Start/End: Complemental strand, 23286475 - 23286434
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  23286475 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgt 23286434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 24245405 - 24245450
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||    
T  24245405 gaggggtaaccttggggcaactggtaaagttgttgtcatgtgactg 24245450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 29521866 - 29521817
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||||||||||| |||||||||| || ||| ||||||||    
T  29521866 gaggggtaaccttggcgcaactgataaagttgttgtcgtgtgactggaag 29521817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 44530103 - 44530152
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||||||||||||| | |||||| ||| ||||    
T  44530103 gaggggtaaccttggcgcaactggtaaagttgctgtcatgtgactagaag 44530152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 28407379 - 28407419
Alignment:
Q  321 ccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  28407379 ccttggcgcaactggtaaagttgttgtcatgtgactggaag 28407419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 345
Target Start/End: Original strand, 42840863 - 42840896
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgtt 345  Q
    |||||||||||||||||||||| |||||||||||    
T  42840863 gaggggtaaccttggcgcaactagtaaagttgtt 42840896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 352
Target Start/End: Original strand, 45071219 - 45071259
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||||||||||  ||||||||||||||| ||||||    
T  45071219 gaggggtaaccttggcgatactggtaaagttgttgtcatgt 45071259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 2541202 - 2541153
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaa 360  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  2541202 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaa 2541153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 21172188 - 21172143
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  21172188 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactg 21172143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 42798623 - 42798672
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  42798623 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaag 42798672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 32758214 - 32758260
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  32758214 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 32758260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 35334996 - 35334946
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  35334996 tgagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaag 35334946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 42805477 - 42805527
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  42805477 tgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaag 42805527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 48735303 - 48735257
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  48735303 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 48735257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 46354148 - 46354197
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  46354148 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattggaag 46354197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 47078034 - 47077989
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  47078034 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 47077989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 18326989 - 18327037
Alignment:
Q  313 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| ||||    
T  18326989 aggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttgaag 18327037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 350
Target Start/End: Complemental strand, 42496017 - 42495978
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcat 350  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  42496017 tgaggggtaaccttggcgcaactggtaaagttgttgtcat 42495978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 357
Target Start/End: Complemental strand, 29140538 - 29140496
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||| |||||||||||||||||||||||| |||||||||||    
T  29140538 gggtaatcttggcgcaactggtaaagttgttgtcatgtaactg 29140496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 14732999 - 14732958
Alignment:
Q  316 ggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  14732999 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 14732958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 21447544 - 21447593
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||||||||||| |||| ||||| |||||||| ||||||    
T  21447544 gaggggtaaccttggcgcaactgataaatttgttgtcatgtaattggaag 21447593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 22699151 - 22699106
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||    
T  22699151 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactg 22699106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 352
Target Start/End: Complemental strand, 34626389 - 34626348
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||||||| |||||||||||||||||||| ||||||    
T  34626389 tgaggggtaaccttagcgcaactggtaaagttgttgtcatgt 34626348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 43557426 - 43557471
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||    
T  43557426 gaggggtaaccttgccgcaactggtaaagttgttgtcatgtgactg 43557471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 5180337 - 5180293
Alignment:
Q  313 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||    
T  5180337 aggggtaaccttgacgcaactggtaaagttgttgtcatgtgactg 5180293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 2663112 - 2663065
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactgga 359  Q
    |||||||||||||||||||||| ||||||||||| | |||| ||||||    
T  2663112 gaggggtaaccttggcgcaactagtaaagttgttgttatgtgactgga 2663065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 353
Target Start/End: Original strand, 12473257 - 12473299
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgta 353  Q
    ||||||||| |||||||||||| |||||||||||| |||||||    
T  12473257 tgaggggtagccttggcgcaaccggtaaagttgttgtcatgta 12473299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 7193039 - 7193084
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||| |||| ||||||||||| |||||| ||||    
T  7193039 gaggggtaaccttggcgtaacttgtaaagttgttgtcatgtgactg 7193084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 352
Target Start/End: Original strand, 42476826 - 42476867
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    ||||||||||| |||||| |||||||||||||||| ||||||    
T  42476826 tgaggggtaacattggcgtaactggtaaagttgttgtcatgt 42476867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 47716413 - 47716462
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||| ||||||| |||||||||  ||||| ||||||||    
T  47716413 gaggggtaaccttggcacaactggaaaagttgttgccatgtgactggaag 47716462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 7794682 - 7794638
Alignment:
Q  317 gtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||| |||||||||||||||||||| | |||| ||||||||    
T  7794682 gtaaccttagcgcaactggtaaagttgttgttatgtgactggaag 7794638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 8149126 - 8149082
Alignment:
Q  313 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||| |||||||||| |||||| |||||| ||||    
T  8149126 aggggtaaccttggcacaactggtaatgttgttgtcatgtgactg 8149082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 45019056 - 45019008
Alignment:
Q  313 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||||||||||||||||| |  | |||||| ||||||||    
T  45019056 aggggtaaccttggcgcaactggtaaaggtcctgtcatgtgactggaag 45019008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 5648209 - 5648258
Alignment:
Q  308 atgtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  5648209 atgtgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 5648258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 6430807 - 6430761
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  6430807 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 6430761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 20224937 - 20224983
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  20224937 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 20224983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 48599005 - 48598959
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  48599005 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 48598959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 10660358 - 10660403
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  10660358 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 10660403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 10874503 - 10874548
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  10874503 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 10874548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 13256578 - 13256529
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  13256578 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaag 13256529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 20405047 - 20405096
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  20405047 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactggaag 20405096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 21646918 - 21646967
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  21646918 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaag 21646967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 23501747 - 23501792
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  23501747 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 23501792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 5306845 - 5306799
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||| | |||||| ||||    
T  5306845 tgaggggtaaccttggcgcaactggtaaagttgatgtcatgtgactg 5306799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 14590790 - 14590836
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||    
T  14590790 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 14590836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 16408777 - 16408735
Alignment:
Q  319 aaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgactggaag 16408735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 345
Target Start/End: Original strand, 30639333 - 30639367
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgtt 345  Q
    |||||||||||||||||||||||||||||||||||    
T  30639333 tgaggggtaaccttggcgcaactggtaaagttgtt 30639367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 11054327 - 11054282
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||||    
T  11054327 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactg 11054282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 16911519 - 16911556
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  16911519 gggtaaccttggcgcaactggtaaagttgttgtcatgt 16911556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 18969698 - 18969735
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  18969698 gggtaaccttggcgcaactggtaaagttgttgtcatgt 18969735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 47528709 - 47528664
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||    
T  47528709 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactg 47528664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 55766647 - 55766598
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||||||||||| ||||||||||||||||||| |||||| || |||||    
T  55766647 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccggaag 55766598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 352
Target Start/End: Complemental strand, 55830902 - 55830862
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  55830902 gaggggtaaccttgacgcaactggtaaagttgttgtcatgt 55830862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 357
Target Start/End: Complemental strand, 17315476 - 17315434
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||| |||||||||||| |||||| ||||    
T  17315476 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactg 17315434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Complemental strand, 5313172 - 5313135
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  5313172 gggtaaccttggcgtaactggtaaagttgttgtcatgt 5313135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 345
Target Start/End: Original strand, 37494805 - 37494838
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgtt 345  Q
    ||||||||||||||| ||||||||||||||||||    
T  37494805 gaggggtaaccttggtgcaactggtaaagttgtt 37494838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 345
Target Start/End: Complemental strand, 30352767 - 30352739
Alignment:
Q  317 gtaaccttggcgcaactggtaaagttgtt 345  Q
    |||||||||||||||||||||||||||||    
T  30352767 gtaaccttggcgcaactggtaaagttgtt 30352739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 24949 - 24903
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  24949 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 24903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 34725278 - 34725232
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  34725278 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 34725232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 18944620 - 18944665
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  18944620 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 18944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 20004273 - 20004224
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  20004273 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaag 20004224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 22930248 - 22930203
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  22930248 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 22930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 352
Target Start/End: Original strand, 34714599 - 34714640
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  34714599 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgt 34714640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 46991781 - 46991830
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  46991781 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaag 46991830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 352
Target Start/End: Original strand, 10668197 - 10668237
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  10668197 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 10668237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 357
Target Start/End: Original strand, 40424721 - 40424764
Alignment:
Q  314 ggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||| |||||| ||||    
T  40424721 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 40424764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 14617014 - 14617060
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||| |||||||||||| |||||| ||||    
T  14617014 tgaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactg 14617060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 19932934 - 19932888
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||| |||||||||||||||||||||||||| |||||| ||||    
T  19932934 tgaggggttaccttggcgcaactggtaaagttgttgtcatgtgactg 19932888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 32632737 - 32632699
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcat 350  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  32632737 gaggggtaaccttggcgcaactggtaaagttgttgtcat 32632699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 45812716 - 45812671
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||    
T  45812716 gaggggtaaccttggcgcaactgataaagttgttgtcatgtgactg 45812671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 46248134 - 46248089
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||    
T  46248134 gaggggtaaccttggctcaactggtaaagttgttgtcatgtgactg 46248089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 47214488 - 47214533
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||||    
T  47214488 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactg 47214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 18742137 - 18742097
Alignment:
Q  317 gtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgtgactg 18742097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 357
Target Start/End: Original strand, 27474255 - 27474303
Alignment:
Q  309 tgtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||| || ||||||||||||||||| |||||| ||||    
T  27474255 tgtgaggggtaaccttagctcaactggtaaagttgttgtcatgtgactg 27474303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 8197018 - 8197065
Alignment:
Q  310 gtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||| ||||||||| |||||||| |||||| ||||    
T  8197018 gtgaggggtaaccttggtgcaactggtcaagttgttgtcatgtgactg 8197065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 45402077 - 45402112
Alignment:
Q  317 gtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    ||||||||||||||||||||||||||||| ||||||    
T  45402077 gtaaccttggcgcaactggtaaagttgttgtcatgt 45402112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 359
Target Start/End: Original strand, 21723642 - 21723688
Alignment:
Q  313 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactgga 359  Q
    |||||||||||| || ||||||||||||||||| |||||| ||||||    
T  21723642 aggggtaaccttcgcacaactggtaaagttgttgtcatgtgactgga 21723688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 357
Target Start/End: Original strand, 25290143 - 25290185
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||| |||||||||||| |||||| ||||    
T  25290143 gggtaaccttggcgcaacaggtaaagttgttgtcatgtgactg 25290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 352
Target Start/End: Complemental strand, 30395903 - 30395869
Alignment:
Q  318 taaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||||||||||||||||||||| ||||||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgt 30395869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 41319988 - 41319942
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||| | ||||||||||||||||| |||||| ||||    
T  41319988 tgaggggtaaccttgacacaactggtaaagttgttgtcatgtgactg 41319942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 4430207 - 4430158
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||| ||| ||||||||| |||||||||||||| |||||| ||||||||    
T  4430207 gagggttaatcttggcgcagctggtaaagttgttgtcatgtgactggaag 4430158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 38478461 - 38478416
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||| ||||| ||||| |||||| ||||    
T  38478461 gaggggtaaccttggcgcaactagtaaacttgttgtcatgtgactg 38478416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 339
Target Start/End: Original strand, 4349675 - 4349703
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaa 339  Q
    |||||||||||||||||||||||||||||    
T  4349675 tgaggggtaaccttggcgcaactggtaaa 4349703  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 352
Target Start/End: Original strand, 10163736 - 10163776
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||| |||||||||||| |||||||||| ||||||    
T  10163736 gaggggtaacattggcgcaactgataaagttgttgtcatgt 10163776  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 12127010 - 12126974
Alignment:
Q  318 taaccttggcgcaactggtaaagttgttatcatgtaa 354  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  12127010 taaccttggcgcaactcgtaaagttgttgtcatgtaa 12126974  T

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Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 30533 - 30578
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  30533 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 30578  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 1346918 - 1346963
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  1346918 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 1346963  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 1354936 - 1354891
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  1354936 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 1354891  T

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Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 357
Target Start/End: Complemental strand, 3815256 - 3815213
Alignment:
Q  314 ggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||||||||||||| |||||| ||||    
T  3815256 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 3815213  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 345
Target Start/End: Original strand, 8409196 - 8409230
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgtt 345  Q
    |||||||||||||||||||||||||||||||||||    
T  8409196 tgaggggtaaccttggcgcaactggtaaagttgtt 8409230  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 14975262 - 14975212
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||| ||||||||||||||| |||||||||||| |||||| ||||||||    
T  14975262 tgagggataaccttggcgcaaccggtaaagttgttgtcatgtgactggaag 14975212  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 1941809 - 1941858
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    ||||||||||||||| |||||||||||||||||| |||| | ||||||||    
T  1941809 gaggggtaaccttggtgcaactggtaaagttgttgtcatctgactggaag 1941858  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 350
Target Start/End: Complemental strand, 33923009 - 33922971
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgttatcat 350  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  33923009 gaggggtaaccttggcgcaaccggtaaagttgttgtcat 33922971  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 345
Target Start/End: Complemental strand, 15866218 - 15866185
Alignment:
Q  312 gaggggtaaccttggcgcaactggtaaagttgtt 345  Q
    |||||||||||||||| |||||||||||||||||    
T  15866218 gaggggtaaccttggcccaactggtaaagttgtt 15866185  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 24734591 - 24734632
Alignment:
Q  316 ggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||| ||||||||||||||||||||||| |||||| ||||    
T  24734591 ggtaacattggcgcaactggtaaagttgttgtcatgtgactg 24734632  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 351
Target Start/End: Original strand, 12063424 - 12063460
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatg 351  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  12063424 gggtaaccttggtgcaactgataaagttgttatcatg 12063460  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 83828 - 83874
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  83828 tgaggggtaaccttggcgcaactagtaaagttgttgtcatgtgactg 83874  T

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Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 226588 - 226542
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||    
T  226588 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 226542  T

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Target: scaffold0258 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 357
Target Start/End: Complemental strand, 13202 - 13159
Alignment:
Q  314 ggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||    
T  13202 ggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactg 13159  T

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Target: scaffold0187 (Bit Score: 31; Significance: 0.00000003; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 8898 - 8944
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||| ||| |||||||| |||||| ||||    
T  8898 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactg 8944  T

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Target: scaffold0187; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 357
Target Start/End: Complemental strand, 10226 - 10184
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||    
T  10226 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactg 10184  T

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Target: scaffold0187; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 19226 - 19272
Alignment:
Q  311 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    |||||||||||||||||||||| ||| |||||||| |||||| ||||    
T  19226 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactg 19272  T

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Target: scaffold0187; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 357
Target Start/End: Complemental strand, 20554 - 20512
Alignment:
Q  315 gggtaaccttggcgcaactggtaaagttgttatcatgtaactg 357  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||    
T  20554 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactg 20512  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 10773 - 10813
Alignment:
Q  321 ccttggcgcaactggtaaagttgttatcatgtaactggaag 361  Q
    |||||| |||||||||||||||||| |||||| ||||||||    
T  10773 ccttggtgcaactggtaaagttgttgtcatgtgactggaag 10813  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 352
Target Start/End: Complemental strand, 73034 - 73002
Alignment:
Q  320 accttggcgcaactggtaaagttgttatcatgt 352  Q
    |||||||||||||||||||||||||| ||||||    
T  73034 accttggcgcaactggtaaagttgttgtcatgt 73002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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