View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0795_low_12 (Length: 456)
Name: NF0795_low_12
Description: NF0795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0795_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 92 - 412
Target Start/End: Complemental strand, 40749858 - 40749538
Alignment:
| Q |
92 |
gcagaaagctctgtgtgtaataaagctatccttcctgtgaaataaaatgtaccattagaaacctaatcatttacactatgcagtagtactagatcattgt |
191 |
Q |
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| T |
40749858 |
gcagaaagctctgtgtgtaataaagctatccttcctgtgaaataaaatgtaccattagaaacctaatcatttacactatgcagtagtactagatcattgt |
40749759 |
T |
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| Q |
192 |
cttaatttgtgaataattaaattatgaggaagtatgcattaaattcatacataatgcaaatgagaagtaattgaaaagaaaaacagttttttcatccaca |
291 |
Q |
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| T |
40749758 |
cttaatttgtgaataattaaattatgaggaagtatgcattaaattcatacataatgcaaatgagaagtaattgaaaagaaaaacagttttttcatccaca |
40749659 |
T |
|
| Q |
292 |
tcaaaaacaataaattttcagaaacttctttatttataaaaaatcagtatgaaggaattgaatgtttaaatttgcatgactttggtctttgaaaccaaag |
391 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40749658 |
tcaaaaacaagaaattttcagaaacttctttatttataaaaaatcagtatgaaggaattgaatgtttaaatttgcatgactttggtctttgaaaccaaag |
40749559 |
T |
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| Q |
392 |
tcacctaaattttttgatact |
412 |
Q |
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||||||||||||||| ||||| |
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| T |
40749558 |
tcacctaaatttttttatact |
40749538 |
T |
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