View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0795_low_62 (Length: 292)
Name: NF0795_low_62
Description: NF0795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0795_low_62 |
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Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 46942819 - 46942538
Alignment:
| Q |
1 |
atgaatgagtaacatagctttcatttcactgccgatttcatatttcggctgcatggtattggtacccttgaatttaaaataggatcgtgtgttctgttgt |
100 |
Q |
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| T |
46942819 |
atgaatgagtaacatagctttcatttcactgccgatttcatatttcggctgcatggtattggtacccttgaatttgaaataggatcgtgtgttctgttgt |
46942720 |
T |
|
| Q |
101 |
ttagtgaatgtgtgtatgatagagtccagaaattttatatctttggtttacttgtatagagtatgcagcttaggaaggttacacttgagacttgttagag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46942719 |
ctagtgaatgtgtgtatgatagagtccagaaattttatatctttggtttacttgtatagagtatgcagcttaggaaggttacacttgagacttgttagag |
46942620 |
T |
|
| Q |
201 |
atgagggaatagagtgttaaaattatcctttaggctacatttacaatgtgttgttagtttgtaaatactgatttggtctctg |
282 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
46942619 |
ataagggaatagagtgttaaaattatcctttaggctacatttacaatgtgttgttagtttgtaaatactgatttggtttctg |
46942538 |
T |
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