View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0795_low_9 (Length: 498)

Name: NF0795_low_9
Description: NF0795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0795_low_9
NF0795_low_9
[»] chr3 (24 HSPs)
chr3 (88-285)||(12047611-12047808)
chr3 (408-447)||(37988629-37988668)
chr3 (411-447)||(7867746-7867782)
chr3 (411-447)||(43977019-43977055)
chr3 (411-447)||(45150301-45150337)
chr3 (409-444)||(45205286-45205321)
chr3 (410-444)||(12094427-12094461)
chr3 (414-447)||(30555-30588)
chr3 (410-447)||(462436-462473)
chr3 (410-447)||(1295331-1295368)
chr3 (410-447)||(11327107-11327144)
chr3 (410-447)||(30580132-30580169)
chr3 (410-446)||(1207945-1207981)
chr3 (411-447)||(8254027-8254063)
chr3 (412-444)||(14771613-14771645)
chr3 (411-447)||(38944176-38944212)
chr3 (411-447)||(43169777-43169813)
chr3 (411-447)||(44855251-44855287)
chr3 (411-447)||(45528977-45529013)
chr3 (411-447)||(47683801-47683837)
chr3 (411-447)||(48405410-48405446)
chr3 (411-447)||(49196696-49196732)
chr3 (411-447)||(50559247-50559283)
chr3 (408-444)||(51873390-51873426)
[»] chr7 (21 HSPs)
chr7 (412-447)||(46725618-46725653)
chr7 (411-447)||(116631-116667)
chr7 (411-447)||(41227067-41227103)
chr7 (411-446)||(37832450-37832485)
chr7 (409-447)||(40760803-40760841)
chr7 (410-447)||(1814342-1814379)
chr7 (410-447)||(2347094-2347131)
chr7 (414-447)||(23680062-23680095)
chr7 (410-447)||(26153645-26153682)
chr7 (410-447)||(33050182-33050219)
chr7 (416-445)||(38098102-38098131)
chr7 (410-447)||(41077535-41077572)
chr7 (410-447)||(44637518-44637555)
chr7 (412-441)||(48955607-48955636)
chr7 (411-447)||(4971290-4971326)
chr7 (411-447)||(19426580-19426616)
chr7 (411-447)||(37848093-37848129)
chr7 (411-447)||(37856189-37856225)
chr7 (411-447)||(40693563-40693599)
chr7 (411-447)||(47530326-47530362)
chr7 (411-447)||(49128723-49128759)
[»] chr4 (30 HSPs)
chr4 (409-447)||(18568850-18568888)
chr4 (410-447)||(45764423-45764460)
chr4 (411-447)||(33093139-33093175)
chr4 (411-447)||(35017153-35017189)
chr4 (411-447)||(39449173-39449209)
chr4 (411-447)||(41154048-41154084)
chr4 (411-447)||(47014939-47014975)
chr4 (408-447)||(925097-925136)
chr4 (408-447)||(39010172-39010211)
chr4 (414-444)||(38160811-38160841)
chr4 (410-444)||(48563758-48563792)
chr4 (411-444)||(940297-940330)
chr4 (410-447)||(30042133-30042170)
chr4 (410-447)||(32365691-32365728)
chr4 (410-447)||(48099810-48099847)
chr4 (410-447)||(51039151-51039188)
chr4 (411-447)||(169537-169573)
chr4 (411-447)||(6290462-6290498)
chr4 (411-447)||(8455861-8455897)
chr4 (411-447)||(33278675-33278711)
chr4 (411-447)||(38864771-38864807)
chr4 (411-447)||(40590612-40590648)
chr4 (411-447)||(41262653-41262689)
chr4 (411-447)||(41495013-41495049)
chr4 (411-447)||(42815404-42815440)
chr4 (411-447)||(42853939-42853975)
chr4 (411-447)||(44272845-44272881)
chr4 (411-439)||(45779334-45779362)
chr4 (411-447)||(51359825-51359861)
chr4 (411-447)||(54036553-54036589)
[»] chr2 (16 HSPs)
chr2 (410-447)||(28277802-28277839)
chr2 (411-443)||(1489652-1489684)
chr2 (411-445)||(6215270-6215304)
chr2 (409-447)||(22303201-22303239)
chr2 (414-444)||(27939160-27939190)
chr2 (414-447)||(19529545-19529578)
chr2 (409-438)||(28508570-28508599)
chr2 (411-447)||(3091741-3091777)
chr2 (411-447)||(14140372-14140408)
chr2 (411-447)||(14891113-14891149)
chr2 (415-447)||(14957740-14957772)
chr2 (410-446)||(21490702-21490738)
chr2 (412-444)||(24032774-24032806)
chr2 (411-447)||(29795447-29795483)
chr2 (411-447)||(36909878-36909914)
chr2 (414-446)||(38421794-38421826)
[»] scaffold0662 (1 HSPs)
scaffold0662 (411-447)||(1078-1114)
[»] scaffold0154 (1 HSPs)
scaffold0154 (411-447)||(19726-19762)
[»] chr8 (10 HSPs)
chr8 (411-447)||(6849296-6849332)
chr8 (411-447)||(36497661-36497697)
chr8 (414-447)||(11138910-11138943)
chr8 (410-447)||(21273745-21273782)
chr8 (410-447)||(31731458-31731495)
chr8 (410-447)||(38844825-38844862)
chr8 (411-447)||(2621785-2621821)
chr8 (411-447)||(8143244-8143280)
chr8 (411-447)||(37562176-37562212)
chr8 (411-447)||(40413373-40413409)
[»] chr6 (11 HSPs)
chr6 (411-447)||(12044332-12044368)
chr6 (411-447)||(27334858-27334894)
chr6 (411-447)||(27395598-27395634)
chr6 (409-447)||(12177575-12177613)
chr6 (411-444)||(12280710-12280743)
chr6 (410-447)||(29376750-29376787)
chr6 (410-447)||(32644622-32644659)
chr6 (410-447)||(33527434-33527471)
chr6 (411-447)||(3339534-3339570)
chr6 (411-447)||(12441538-12441574)
chr6 (411-447)||(30945823-30945859)
[»] chr1 (16 HSPs)
chr1 (411-447)||(18610773-18610809)
chr1 (411-447)||(30530609-30530645)
chr1 (411-447)||(34974784-34974820)
chr1 (412-445)||(9882696-9882729)
chr1 (410-447)||(41507218-41507255)
chr1 (411-447)||(740991-741027)
chr1 (411-447)||(6829818-6829854)
chr1 (411-447)||(7078535-7078571)
chr1 (411-447)||(8934631-8934667)
chr1 (411-447)||(9011645-9011681)
chr1 (411-447)||(26585208-26585244)
chr1 (411-447)||(27687543-27687579)
chr1 (411-447)||(40596078-40596114)
chr1 (411-447)||(40612114-40612150)
chr1 (411-447)||(42256460-42256496)
chr1 (411-447)||(48872985-48873021)
[»] chr5 (14 HSPs)
chr5 (408-447)||(6420669-6420708)
chr5 (411-446)||(14508193-14508228)
chr5 (414-444)||(41865646-41865676)
chr5 (414-447)||(4098626-4098659)
chr5 (410-447)||(16143389-16143426)
chr5 (410-447)||(42699056-42699093)
chr5 (411-447)||(125092-125128)
chr5 (411-447)||(582902-582938)
chr5 (411-447)||(4800537-4800573)
chr5 (411-447)||(8959160-8959196)
chr5 (411-447)||(14914372-14914408)
chr5 (411-447)||(29803225-29803261)
chr5 (411-447)||(34428160-34428196)
chr5 (411-447)||(36572691-36572727)
[»] scaffold0006 (1 HSPs)
scaffold0006 (411-447)||(73079-73115)


Alignment Details
Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 88 - 285
Target Start/End: Original strand, 12047611 - 12047808
Alignment:
Q  88 aaaaactctaaaagtaaatatacaaacggcaataacggtttcttgggtgactatttacctgtctgtagggtttgcaatttggaaatttgacaaaaataaa 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12047611 aaaaactctaaaagtaaatatacaaacggcaataacggtttcttgtgtgactatttacctgtctatagggtttgcaatttggaaatttgacaaaaataaa 12047710  T
Q  188 ttattttaactaagaagaaatattttttctctatagtttattaagtgtggacattttaccattgagtaataatattcgtacaaccatttgataacaac 285  Q
    || ||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12047711 ttgttttaactatgatgaaatattttttctatatagtttattaagtgtggacattttaccattgagtaataatattcgtacaaccatttgataacaac 12047808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 447
Target Start/End: Original strand, 37988629 - 37988668
Alignment:
Q  408 attgagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  37988629 attgagaaatgatatttatataactattttgtgacaactt 37988668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 7867782 - 7867746
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||||||||||||||||||||    
T  7867782 gagaaatgatatttgtacaactattttgtgacaactt 7867746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 43977019 - 43977055
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||| |||||||||||||||||||||||||||||    
T  43977019 gagaaattatatttatacaactattttgtgacaactt 43977055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 45150337 - 45150301
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||| |||||||||||||||||||||||||    
T  45150337 gagaaatgatacttatacaactattttgtgacaactt 45150301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 444
Target Start/End: Original strand, 45205286 - 45205321
Alignment:
Q  409 ttgagaaatgatatttatacaactattttgtgacaa 444  Q
    |||||||||||||||| |||||||||||||||||||    
T  45205286 ttgagaaatgatatttgtacaactattttgtgacaa 45205321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 12094461 - 12094427
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaa 444  Q
    |||||||||||||||||||||||||||| ||||||    
T  12094461 tgagaaatgatatttatacaactattttatgacaa 12094427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 30588 - 30555
Alignment:
Q  414 aaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||| ||||||||||||||||||||||    
T  30588 aaatgatatttttacaactattttgtgacaactt 30555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 462473 - 462436
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  462473 tgagaaatgatatttgtacaaccattttgtgacaactt 462436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 1295331 - 1295368
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  1295331 tgagaaatgatatttgtacaactattttgtgataactt 1295368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 11327107 - 11327144
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  11327107 tgagaaatgatatttgtacaaccattttgtgacaactt 11327144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 30580132 - 30580169
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  30580132 tgagaaatgatatttatacaaccattttatgacaactt 30580169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 446
Target Start/End: Original strand, 1207945 - 1207981
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaact 446  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  1207945 tgagaaatgatatttgtacaactattatgtgacaact 1207981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 8254027 - 8254063
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  8254027 gagaaatgatatttgtacaaccattttgtgacaactt 8254063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 444
Target Start/End: Complemental strand, 14771645 - 14771613
Alignment:
Q  412 agaaatgatatttatacaactattttgtgacaa 444  Q
    ||||||||||||||||||||||||| |||||||    
T  14771645 agaaatgatatttatacaactatttcgtgacaa 14771613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 38944212 - 38944176
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||| |||||||||||||    
T  38944212 gagaaatgatatttgtacaactaatttgtgacaactt 38944176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 43169813 - 43169777
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  43169813 gagaaatgatatttgtacaaccattttgtgacaactt 43169777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 44855251 - 44855287
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| || |||||||||||||||||||    
T  44855251 gagaaatgatatttgtataactattttgtgacaactt 44855287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 45529013 - 45528977
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||| |||||||||    
T  45529013 gagaaatgatatttgtacaactattttttgacaactt 45528977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 47683801 - 47683837
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  47683801 gagaaatgatatttgtacaaccattttgtgacaactt 47683837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 48405410 - 48405446
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  48405410 gagaaatgatatttgtacaaccattttgtgacaactt 48405446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 49196696 - 49196732
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  49196696 gagaaatgatatttgtacaaccattttgtgacaactt 49196732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 50559283 - 50559247
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||| |||||||||    
T  50559283 gagaaatgatatttgtacaactattttttgacaactt 50559247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 51873390 - 51873426
Alignment:
Q  408 attgagaaatgatatttatacaactattttgtgacaa 444  Q
    |||||||||||||||||  ||||||||||||||||||    
T  51873390 attgagaaatgatatttgaacaactattttgtgacaa 51873426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000005; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 46725618 - 46725653
Alignment:
Q  412 agaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||||||||||||||||||    
T  46725618 agaaatgatatttatacaactattttgtgacaactt 46725653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 116631 - 116667
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||||||||||||||||||| ||||||    
T  116631 gagaaatgatatttatacaactattttgtgccaactt 116667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 41227067 - 41227103
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||||||||| ||||||||||||||||    
T  41227067 gagaaatgatatttatacaattattttgtgacaactt 41227103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 446
Target Start/End: Original strand, 37832450 - 37832485
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaact 446  Q
    |||||||||||||| |||||||||||||||||||||    
T  37832450 gagaaatgatatttgtacaactattttgtgacaact 37832485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 447
Target Start/End: Complemental strand, 40760841 - 40760803
Alignment:
Q  409 ttgagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  40760841 ttgaaaaatgatatttatacaactattttgtgataactt 40760803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 1814379 - 1814342
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  1814379 tgagaaatgatatttgtacaactattttgcgacaactt 1814342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 2347131 - 2347094
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  2347131 tgagaaatgatatttgtacaaccattttgtgacaactt 2347094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 23680095 - 23680062
Alignment:
Q  414 aaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||| ||||||||||||||||||||||    
T  23680095 aaatgatatttgtacaactattttgtgacaactt 23680062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 26153645 - 26153682
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  26153645 tgagaaatgatatttgtacaactattttatgacaactt 26153682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 33050182 - 33050219
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  33050182 tgagaaatgatatttgtacaaccattttgtgacaactt 33050219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 445
Target Start/End: Original strand, 38098102 - 38098131
Alignment:
Q  416 atgatatttatacaactattttgtgacaac 445  Q
    ||||||||||||||||||||||||||||||    
T  38098102 atgatatttatacaactattttgtgacaac 38098131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 41077572 - 41077535
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  41077572 tgagaaatgatatttttacaactactttgtgacaactt 41077535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 44637555 - 44637518
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  44637555 tgagaaaggatatttatataactattttgtgacaactt 44637518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 441
Target Start/End: Complemental strand, 48955636 - 48955607
Alignment:
Q  412 agaaatgatatttatacaactattttgtga 441  Q
    ||||||||||||||||||||||||||||||    
T  48955636 agaaatgatatttatacaactattttgtga 48955607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 4971290 - 4971326
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  4971290 gagaaatgatatttgtacaaccattttgtgacaactt 4971326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 19426580 - 19426616
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  19426580 gagaaatgatatttgtacaaccattttgtgacaactt 19426616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 37848093 - 37848129
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  37848093 gagaaatgatatctatacaactattttgcgacaactt 37848129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 37856225 - 37856189
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  37856225 gagaaatgatatttgtacaaccattttgtgacaactt 37856189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 40693599 - 40693563
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||| |||||||||    
T  40693599 gagaaatgatatttgtacaactattttttgacaactt 40693563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 47530362 - 47530326
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  47530362 gagaaatgatatttatacaaccattttatgacaactt 47530326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 49128723 - 49128759
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  49128723 gagaaatgatatttatacaaccattttgtaacaactt 49128759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 447
Target Start/End: Complemental strand, 18568888 - 18568850
Alignment:
Q  409 ttgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  18568888 ttgagaaatgatatttatacaaccattttgtgacaactt 18568850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 45764460 - 45764423
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||||||||||||||||| |||||||||    
T  45764460 tgagaaatgatatttatacaactattttatgacaactt 45764423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 33093175 - 33093139
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||||||||||||||||||||    
T  33093175 gagaaatgatatttgtacaactattttgtgacaactt 33093139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 35017153 - 35017189
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||||||||||||||||||||    
T  35017153 gagaaatgatatttgtacaactattttgtgacaactt 35017189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 39449173 - 39449209
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||||||||||||| |||||    
T  39449173 gagaaatgatatttatacaactattttgtgataactt 39449209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 41154048 - 41154084
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||||||||| |||||||||    
T  41154048 gagaaatgatatttatacaactattttttgacaactt 41154084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 47014939 - 47014975
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||||||||||||||||||||    
T  47014939 gagaaatgatatttgtacaactattttgtgacaactt 47014975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 447
Target Start/End: Complemental strand, 925136 - 925097
Alignment:
Q  408 attgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  925136 attgataaatgatatttatacaaccattttgtgacaactt 925097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 447
Target Start/End: Complemental strand, 39010211 - 39010172
Alignment:
Q  408 attgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  39010211 attgagaaatgatatttgtacaaccattttgtgacaactt 39010172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 444
Target Start/End: Complemental strand, 38160841 - 38160811
Alignment:
Q  414 aaatgatatttatacaactattttgtgacaa 444  Q
    |||||||||||||||||||||||||||||||    
T  38160841 aaatgatatttatacaactattttgtgacaa 38160811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 48563792 - 48563758
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaa 444  Q
    |||||||||||||||||||| ||||||||||||||    
T  48563792 tgagaaatgatatttatacagctattttgtgacaa 48563758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 444
Target Start/End: Complemental strand, 940330 - 940297
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaa 444  Q
    |||||||||||||| |||||||||||||||||||    
T  940330 gagaaatgatatttgtacaactattttgtgacaa 940297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 30042133 - 30042170
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  30042133 tgagaaatgatatttgtacaaccattttgtgacaactt 30042170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 32365728 - 32365691
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  32365728 tgagaaatgatatttgtacaaccattttgtgacaactt 32365691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 48099810 - 48099847
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||||||||||| | |||||||||||||    
T  48099810 tgagaaatgatatttatacaaccactttgtgacaactt 48099847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 51039188 - 51039151
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  51039188 tgagaaatgatatttgtacaactactttgtgacaactt 51039151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 169573 - 169537
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaactt 169537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 6290462 - 6290498
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||||| |||||||    
T  6290462 gagaaatgatatttgtacaactattttgtaacaactt 6290498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 8455861 - 8455897
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  8455861 gagaaatgttatttgtacaactattttgtgacaactt 8455897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 33278675 - 33278711
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||  |||||||||||||||||||||    
T  33278675 gagaaatgatatttgaacaactattttgtgacaactt 33278711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 38864807 - 38864771
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  38864807 gagaaatgatatttgtacaattattttgtgacaactt 38864771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 40590612 - 40590648
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  40590612 gagaaatgatatttaaacaattattttgtgacaactt 40590648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 41262689 - 41262653
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  41262689 gagaaatgatatttgtacaattattttgtgacaactt 41262653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 41495013 - 41495049
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||| |||||||||||    
T  41495013 gagaaatgatatttgtacaactattatgtgacaactt 41495049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 42815404 - 42815440
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||||| |||||||    
T  42815404 gagaaatgatatttgtacaactattttgtaacaactt 42815440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 42853939 - 42853975
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||| |||||||||    
T  42853939 gagaaatgatatttgtacaactattttttgacaactt 42853975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 44272881 - 44272845
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||| |||||||||    
T  44272881 gagaaatgatatttgtacaactattttttgacaactt 44272845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 439
Target Start/End: Complemental strand, 45779362 - 45779334
Alignment:
Q  411 gagaaatgatatttatacaactattttgt 439  Q
    |||||||||||||||||||||||||||||    
T  45779362 gagaaatgatatttatacaactattttgt 45779334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 51359861 - 51359825
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  51359861 gagaaatgatatttgtacaaccattttgtgacaactt 51359825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 54036589 - 54036553
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  54036589 gagaaatgatatttgtacaaccattttgtgacaactt 54036553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000007; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 28277839 - 28277802
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||||||||||||||||| |||||||||    
T  28277839 tgagaaatgatatttatacaactattttctgacaactt 28277802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 1489684 - 1489652
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgaca 443  Q
    |||||||||||||||||||||||||||||||||    
T  1489684 gagaaatgatatttatacaactattttgtgaca 1489652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 445
Target Start/End: Complemental strand, 6215304 - 6215270
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaac 445  Q
    ||||||||||||||||||||||||||||| |||||    
T  6215304 gagaaatgatatttatacaactattttgttacaac 6215270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 22303201 - 22303239
Alignment:
Q  409 ttgagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  22303201 ttgagaaatgatatttgtacaactattttttgacaactt 22303239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 444
Target Start/End: Original strand, 27939160 - 27939190
Alignment:
Q  414 aaatgatatttatacaactattttgtgacaa 444  Q
    |||||||||||||||||||||||||||||||    
T  27939160 aaatgatatttatacaactattttgtgacaa 27939190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Original strand, 19529545 - 19529578
Alignment:
Q  414 aaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||||||| |||||||||||||||    
T  19529545 aaatgatatttatacaaccattttgtgacaactt 19529578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 438
Target Start/End: Complemental strand, 28508599 - 28508570
Alignment:
Q  409 ttgagaaatgatatttatacaactattttg 438  Q
    ||||||||||||||||||||||||||||||    
T  28508599 ttgagaaatgatatttatacaactattttg 28508570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 3091741 - 3091777
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||||||| |||||    
T  3091741 gagaaatgatatttgtacaactattttgtgataactt 3091777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 14140408 - 14140372
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||| |||||||||||||    
T  14140408 gagaaatgatatttgtacaactaatttgtgacaactt 14140372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 14891149 - 14891113
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||||||| |||||    
T  14891149 gagaaatgatatttgtacaactattttgtgataactt 14891113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 447
Target Start/End: Complemental strand, 14957772 - 14957740
Alignment:
Q  415 aatgatatttatacaactattttgtgacaactt 447  Q
    |||| ||||||||||||||||||||||||||||    
T  14957772 aatgttatttatacaactattttgtgacaactt 14957740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 446
Target Start/End: Original strand, 21490702 - 21490738
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaact 446  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  21490702 tgagaaatgatatttgtacaactactttgtgacaact 21490738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 444
Target Start/End: Original strand, 24032774 - 24032806
Alignment:
Q  412 agaaatgatatttatacaactattttgtgacaa 444  Q
    |||||||||||||||||||||||||| ||||||    
T  24032774 agaaatgatatttatacaactattttatgacaa 24032806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 29795447 - 29795483
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  29795447 gagaaatgatatttgtacaaccattttgtgacaactt 29795483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 36909914 - 36909878
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  36909914 gagaaatgatatttgtacaaccattttgtgacaactt 36909878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 446
Target Start/End: Complemental strand, 38421826 - 38421794
Alignment:
Q  414 aaatgatatttatacaactattttgtgacaact 446  Q
    ||||||||||||| |||||||||||||||||||    
T  38421826 aaatgatatttattcaactattttgtgacaact 38421794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 1078 - 1114
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||||||||||||||||||||    
T  1078 gagaaatgatatttgtacaactattttgtgacaactt 1114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 19762 - 19726
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||||||||||||||||||||    
T  19762 gagaaatgatatttgtacaactattttgtgacaactt 19726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 6849332 - 6849296
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||| |||||||||||||||    
T  6849332 gagaaatgatatttatacaaccattttgtgacaactt 6849296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 36497661 - 36497697
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||||||||||||||||||||    
T  36497661 gagaaatgatatttgtacaactattttgtgacaactt 36497697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Original strand, 11138910 - 11138943
Alignment:
Q  414 aaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||| ||||||||||||||||||||||    
T  11138910 aaatgatatttgtacaactattttgtgacaactt 11138943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 21273782 - 21273745
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  21273782 tgagaaatgatatttgtacaaccattttgtgacaactt 21273745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 31731495 - 31731458
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  31731495 tgagaaatgatatttatacaactaatttatgacaactt 31731458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 38844862 - 38844825
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  38844862 tgagaaatgatatttgtacaaccattttgtgacaactt 38844825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 2621785 - 2621821
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  2621785 gagaaatgatatttatacaactaatttgtgataactt 2621821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 8143280 - 8143244
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  8143280 gagaaataatatttgtacaactattttgtgacaactt 8143244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 37562212 - 37562176
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||| |||||||||||    
T  37562212 gagaaatgatatttgtacaactattatgtgacaactt 37562176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 40413409 - 40413373
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  40413409 gagaaatgatatttgtacaattattttgtgacaactt 40413373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 12044332 - 12044368
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||||||||| |||||||||    
T  12044332 gagaaatgatatttatacaactattttttgacaactt 12044368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 27334858 - 27334894
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||||||||||||||||||||    
T  27334858 gagaaatgatatttgtacaactattttgtgacaactt 27334894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 27395598 - 27395634
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||||||||||||||||||||    
T  27395598 gagaaatgatatttgtacaactattttgtgacaactt 27395634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 12177575 - 12177613
Alignment:
Q  409 ttgagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  12177575 ttgagaaatgttatttgtacaactattttgtgacaactt 12177613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 444
Target Start/End: Original strand, 12280710 - 12280743
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaa 444  Q
    ||||||||||||||||||||||||||| ||||||    
T  12280710 gagaaatgatatttatacaactattttttgacaa 12280743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 29376787 - 29376750
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  29376787 tgagaaatgatatttttacaaccattttgtgacaactt 29376750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 32644622 - 32644659
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  32644622 tgagaaatgatatttgtacaactattttttgacaactt 32644659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 33527434 - 33527471
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  33527434 tgagaaatgatatttatacaactactttgtgataactt 33527471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 3339570 - 3339534
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  3339570 gagaaatgatatttgtacaaccattttgtgacaactt 3339534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 12441538 - 12441574
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||| |||||||||||||    
T  12441538 gagaaatgatatttgtacaactactttgtgacaactt 12441574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 30945823 - 30945859
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||  |||||||||||||||    
T  30945823 gagaaatgatatttatacaatcattttgtgacaactt 30945859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 18610773 - 18610809
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| ||||||||||||||||||||||    
T  18610773 gagaaatgatatttgtacaactattttgtgacaactt 18610809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 30530645 - 30530609
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||| |||||||||||||||    
T  30530645 gagaaatgatatttatacaaccattttgtgacaactt 30530609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 34974820 - 34974784
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||| |||||||||||||||    
T  34974820 gagaaatgatatttatacaaccattttgtgacaactt 34974784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 9882729 - 9882696
Alignment:
Q  412 agaaatgatatttatacaactattttgtgacaac 445  Q
    ||||||||||||| ||||||||||||||||||||    
T  9882729 agaaatgatatttgtacaactattttgtgacaac 9882696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 41507255 - 41507218
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  41507255 tgagaaatgatatttgtacaaccattttgtgacaactt 41507218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 741027 - 740991
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||||||||| | |||||||    
T  741027 gagaaatgatatttatacaactattttctaacaactt 740991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 6829854 - 6829818
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||| |||||||||||||    
T  6829854 gagaaatgatatttgtacaactaatttgtgacaactt 6829818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 7078571 - 7078535
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||| |||||||||||||||||    
T  7078571 gagaaatgatatttgtacatctattttgtgacaactt 7078535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 8934667 - 8934631
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  8934667 gagaaattatatttgtacaactattttgtgacaactt 8934631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 9011645 - 9011681
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  9011645 gagaaatgatatttgtacaaccattttgtgacaactt 9011681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 26585244 - 26585208
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||||||| |||||    
T  26585244 gagaaatgatatttgtacaactattttgtgataactt 26585208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 27687579 - 27687543
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  27687579 gagaaatgatatttgtacaaccattttgtgacaactt 27687543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 40596114 - 40596078
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  40596114 gagaaatgatatttgtacaaccattttgtgacaactt 40596078  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 40612114 - 40612150
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  40612114 gagaaatgatatttgtacaaccattttgtgacaactt 40612150  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 42256460 - 42256496
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  42256460 gagaaatgatatttgtacaaccattttgtgacaactt 42256496  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 48873021 - 48872985
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||| | |||||||||||||    
T  48873021 gagaaatgatatttatacaaccactttgtgacaactt 48872985  T

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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 447
Target Start/End: Original strand, 6420669 - 6420708
Alignment:
Q  408 attgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  6420669 attgagaaatgatatttctacaaccattttgtgacaactt 6420708  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 446
Target Start/End: Complemental strand, 14508228 - 14508193
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaact 446  Q
    |||||||||||||| |||||||||||||||||||||    
T  14508228 gagaaatgatatttgtacaactattttgtgacaact 14508193  T

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Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 444
Target Start/End: Complemental strand, 41865676 - 41865646
Alignment:
Q  414 aaatgatatttatacaactattttgtgacaa 444  Q
    |||||||||||||||||||||||||||||||    
T  41865676 aaatgatatttatacaactattttgtgacaa 41865646  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Original strand, 4098626 - 4098659
Alignment:
Q  414 aaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||| ||||||||||||||||||||||    
T  4098626 aaatgatatttgtacaactattttgtgacaactt 4098659  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 16143389 - 16143426
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  16143389 tgagaaatgatatttgtacaaccattttgtgacaactt 16143426  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Original strand, 42699056 - 42699093
Alignment:
Q  410 tgagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  42699056 tgagaaatgatatttgtacaaccattttgtgacaactt 42699093  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 125092 - 125128
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||| |||||||||||||    
T  125092 gagaaatgatatttgtacaactactttgtgacaactt 125128  T

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Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 582938 - 582902
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||||||| |||||    
T  582938 gagaaatgatatttttacaactattttgtgataactt 582902  T

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Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 4800573 - 4800537
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  4800573 gagaaatgatatttatacaactactttttgacaactt 4800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 8959160 - 8959196
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||| |||||||||||    
T  8959160 gagaaatgatatttgtacaactattatgtgacaactt 8959196  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 14914372 - 14914408
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||| |||||||||||||||    
T  14914372 gagaaatgatatttgtacaaccattttgtgacaactt 14914408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 29803225 - 29803261
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||| |||||||||    
T  29803225 gagaaatgatatttgtacaactattttttgacaactt 29803261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 34428160 - 34428196
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| |||||||||||| |||||||||    
T  34428160 gagaaatgatatttgtacaactattttttgacaactt 34428196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Original strand, 36572691 - 36572727
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    |||||||||||||| || |||||||||||||||||||    
T  36572691 gagaaatgatatttgtataactattttgtgacaactt 36572727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 73115 - 73079
Alignment:
Q  411 gagaaatgatatttatacaactattttgtgacaactt 447  Q
    ||||||||||||||  |||||||||||||||||||||    
T  73115 gagaaatgatattttgacaactattttgtgacaactt 73079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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