View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0796_high_47 (Length: 208)
Name: NF0796_high_47
Description: NF0796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0796_high_47 |
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Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 31697349 - 31697527
Alignment:
| Q |
1 |
ttgtcctcaatggccttaagttttttctcctcttttgtaagaaccctatcacagctaaagtctttcaccataacaatttcatctttgtatgtactcgtat |
100 |
Q |
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| T |
31697349 |
ttgtcctcaatggccttaagttttttctcctctttggtaagaaccctatcacagctaaagtctttcaccataacaatttcatctttgaatgtactcgtat |
31697448 |
T |
|
| Q |
101 |
ttgtatctaatagacaagcagagaaacaatccttagcataattaaatttgtacaagaatatatagtaatattatggaac |
179 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||| |
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|
| T |
31697449 |
ttgtatctaatagacaagtagagaaacaatccttagtataattaaatttgtacaagaatatataataatattattgaac |
31697527 |
T |
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