View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0796_low_33 (Length: 401)
Name: NF0796_low_33
Description: NF0796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0796_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 65 - 372
Target Start/End: Original strand, 6383311 - 6383618
Alignment:
| Q |
65 |
ttttgaattatttgttcagttggtcatgttttaacatttaggaatccgtagtagatatctaactccatgttgtttgttagcatacttttcccaaatttat |
164 |
Q |
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| T |
6383311 |
ttttgaataatttgttcagttggtcatgttttaacatttaggaatccgtagtagatatctaactccatgttgtttgttagcatacttttcccaaatttat |
6383410 |
T |
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| Q |
165 |
ctcttcttaacataaaccatgttataaattcgaatgacttataaattgtttatttttatgcttgactttaaatgaatatttagaatctctttaattttat |
264 |
Q |
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| T |
6383411 |
ctcttcttaacataaaccatgttataaattcgaatgacttataaattgtgtatttttatgcttgactttcaatgaatatttagaatctctttaattttat |
6383510 |
T |
|
| Q |
265 |
agtaaaatgacattaaaatgttgatttagggaattaacccacacctttatatatgagatttggtgaggaaaagaataggggattcgagtgtggatgaaac |
364 |
Q |
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| T |
6383511 |
agtaaaatgacattaaaatgttgatttagggaattaacccacacctttatatatgagatttggtgaggaaaagaataggggattcgagtgtggatgaaac |
6383610 |
T |
|
| Q |
365 |
catggatt |
372 |
Q |
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|||||||| |
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| T |
6383611 |
catggatt |
6383618 |
T |
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