View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0800_high_9 (Length: 258)

Name: NF0800_high_9
Description: NF0800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0800_high_9
NF0800_high_9
[»] chr4 (35 HSPs)
chr4 (4-212)||(30838101-30838303)
chr4 (6-117)||(19482648-19482759)
chr4 (1-123)||(22234853-22234976)
chr4 (38-117)||(2361975-2362054)
chr4 (6-117)||(5414140-5414251)
chr4 (34-105)||(35952613-35952684)
chr4 (5-91)||(30982845-30982931)
chr4 (6-111)||(903908-904013)
chr4 (36-120)||(30298923-30299008)
chr4 (36-120)||(30327791-30327876)
chr4 (35-111)||(16303263-16303339)
chr4 (1-105)||(24613664-24613768)
chr4 (38-117)||(21945483-21945562)
chr4 (9-111)||(27706148-27706250)
chr4 (48-117)||(14126121-14126190)
chr4 (5-62)||(19312370-19312427)
chr4 (5-97)||(21873340-21873430)
chr4 (5-97)||(21929201-21929291)
chr4 (39-116)||(35157986-35158063)
chr4 (60-104)||(5832716-5832760)
chr4 (24-131)||(7012032-7012139)
chr4 (38-117)||(23292986-23293065)
chr4 (29-123)||(4383342-4383435)
chr4 (15-97)||(51701258-51701340)
chr4 (12-117)||(847931-848036)
chr4 (34-103)||(13134444-13134513)
chr4 (38-111)||(15029751-15029824)
chr4 (74-111)||(20633471-20633508)
chr4 (12-69)||(46083965-46084022)
chr4 (52-97)||(56257933-56257978)
chr4 (38-98)||(8423718-8423778)
chr4 (59-111)||(11651155-11651207)
chr4 (38-106)||(12895274-12895342)
chr4 (29-89)||(40742599-40742659)
chr4 (38-90)||(54580023-54580075)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-117)||(241574-241686)
[»] chr7 (37 HSPs)
chr7 (34-117)||(5235966-5236049)
chr7 (5-111)||(24339628-24339734)
chr7 (5-111)||(32308106-32308212)
chr7 (33-117)||(27945021-27945105)
chr7 (34-117)||(7328687-7328770)
chr7 (1-117)||(15902802-15902918)
chr7 (1-88)||(27229274-27229360)
chr7 (13-105)||(11831424-11831516)
chr7 (5-111)||(5409809-5409909)
chr7 (34-117)||(13770671-13770754)
chr7 (8-111)||(21930615-21930717)
chr7 (38-117)||(26733284-26733363)
chr7 (35-117)||(10042917-10042999)
chr7 (39-117)||(11061077-11061155)
chr7 (38-120)||(15680786-15680868)
chr7 (5-90)||(11665407-11665492)
chr7 (38-123)||(28155544-28155629)
chr7 (32-117)||(43027463-43027548)
chr7 (6-107)||(2334238-2334340)
chr7 (34-117)||(1433434-1433517)
chr7 (38-117)||(3721074-3721152)
chr7 (6-117)||(6028605-6028716)
chr7 (4-111)||(6630878-6630985)
chr7 (38-117)||(24105658-24105737)
chr7 (10-117)||(26329354-26329461)
chr7 (37-111)||(9408333-9408407)
chr7 (39-117)||(22484005-22484083)
chr7 (9-91)||(26033432-26033514)
chr7 (48-117)||(4017804-4017873)
chr7 (38-91)||(21880158-21880211)
chr7 (38-111)||(25481888-25481961)
chr7 (51-112)||(42720903-42720964)
chr7 (48-117)||(43249973-43250042)
chr7 (39-91)||(1401031-1401083)
chr7 (29-97)||(8160416-8160484)
chr7 (37-97)||(19992001-19992061)
chr7 (38-110)||(20549778-20549850)
[»] chr6 (55 HSPs)
chr6 (5-111)||(16766683-16766789)
chr6 (35-117)||(3398599-3398680)
chr6 (28-112)||(7723240-7723324)
chr6 (39-111)||(7938102-7938174)
chr6 (32-117)||(7086775-7086860)
chr6 (6-117)||(8365487-8365598)
chr6 (34-117)||(12696304-12696387)
chr6 (38-120)||(17841589-17841671)
chr6 (3-117)||(25038036-25038150)
chr6 (5-117)||(9107337-9107449)
chr6 (38-117)||(7625102-7625181)
chr6 (24-111)||(21395294-21395380)
chr6 (38-108)||(7977830-7977900)
chr6 (32-117)||(8805568-8805651)
chr6 (7-112)||(5970077-5970182)
chr6 (38-111)||(7996378-7996451)
chr6 (38-111)||(8022350-8022423)
chr6 (35-104)||(9195751-9195820)
chr6 (5-90)||(31384927-31385011)
chr6 (34-97)||(9025490-9025553)
chr6 (34-117)||(9027158-9027241)
chr6 (32-111)||(10770668-10770747)
chr6 (34-116)||(677818-677900)
chr6 (51-110)||(1532225-1532286)
chr6 (33-111)||(7930291-7930369)
chr6 (59-121)||(10842508-10842570)
chr6 (51-117)||(13851716-13851782)
chr6 (35-97)||(24138426-24138488)
chr6 (38-111)||(5732510-5732583)
chr6 (38-111)||(7265593-7265666)
chr6 (5-90)||(9522898-9522983)
chr6 (48-109)||(17341674-17341735)
chr6 (29-110)||(26562676-26562757)
chr6 (59-111)||(17168484-17168536)
chr6 (38-118)||(28152078-28152157)
chr6 (38-106)||(33001289-33001357)
chr6 (38-117)||(426514-426593)
chr6 (34-117)||(10888970-10889053)
chr6 (6-117)||(17435179-17435290)
chr6 (38-117)||(34595114-34595193)
chr6 (59-117)||(6389723-6389781)
chr6 (51-117)||(9658859-9658925)
chr6 (73-111)||(10760876-10760914)
chr6 (38-108)||(19040341-19040411)
chr6 (54-116)||(34447374-34447436)
chr6 (38-107)||(853859-853928)
chr6 (38-111)||(6898281-6898354)
chr6 (6-110)||(10339093-10339198)
chr6 (39-116)||(15489733-15489810)
chr6 (40-117)||(16833288-16833365)
chr6 (54-103)||(24614404-24614453)
chr6 (51-111)||(13689505-13689565)
chr6 (31-111)||(19044450-19044530)
chr6 (38-98)||(21924935-21924995)
chr6 (40-116)||(26178683-26178759)
[»] chr1 (53 HSPs)
chr1 (5-111)||(9629867-9629973)
chr1 (38-120)||(46348383-46348465)
chr1 (5-117)||(40917731-40917841)
chr1 (6-120)||(18556424-18556538)
chr1 (1-117)||(6612134-6612250)
chr1 (5-105)||(9828036-9828136)
chr1 (35-117)||(37055853-37055935)
chr1 (5-117)||(1486682-1486788)
chr1 (1-89)||(16164278-16164366)
chr1 (38-117)||(41877470-41877549)
chr1 (39-121)||(36878437-36878519)
chr1 (38-111)||(22881616-22881689)
chr1 (38-119)||(38078661-38078742)
chr1 (34-117)||(5376496-5376579)
chr1 (38-117)||(5927340-5927419)
chr1 (5-117)||(5944261-5944375)
chr1 (40-111)||(22907341-22907412)
chr1 (38-97)||(40181871-40181930)
chr1 (51-117)||(398778-398844)
chr1 (25-111)||(6427336-6427422)
chr1 (51-117)||(16927198-16927264)
chr1 (38-112)||(21530674-21530748)
chr1 (7-117)||(47989478-47989587)
chr1 (43-117)||(48450592-48450666)
chr1 (34-107)||(113289-113362)
chr1 (24-117)||(17754291-17754384)
chr1 (38-111)||(22515887-22515960)
chr1 (48-121)||(29144368-29144441)
chr1 (6-123)||(32461432-32461548)
chr1 (34-95)||(34712379-34712440)
chr1 (57-117)||(2851002-2851061)
chr1 (38-106)||(39130767-39130835)
chr1 (48-111)||(3490400-3490463)
chr1 (31-117)||(15641025-15641109)
chr1 (34-109)||(20157346-20157421)
chr1 (35-110)||(25272469-25272544)
chr1 (51-106)||(34257923-34257978)
chr1 (34-117)||(38503300-38503383)
chr1 (33-123)||(1704987-1705077)
chr1 (29-91)||(8010278-8010340)
chr1 (51-109)||(19324550-19324608)
chr1 (51-89)||(23804436-23804474)
chr1 (17-87)||(44482240-44482310)
chr1 (59-116)||(2896142-2896199)
chr1 (48-117)||(14359532-14359600)
chr1 (5-111)||(17831500-17831604)
chr1 (73-110)||(19562656-19562693)
chr1 (34-111)||(24577182-24577259)
chr1 (5-110)||(27471533-27471638)
chr1 (38-111)||(31672895-31672968)
chr1 (38-111)||(37598818-37598890)
chr1 (38-90)||(14332642-14332694)
chr1 (35-111)||(15323149-15323225)
[»] chr3 (45 HSPs)
chr3 (5-110)||(4987258-4987363)
chr3 (6-117)||(14216872-14216983)
chr3 (6-117)||(14223001-14223112)
chr3 (5-106)||(8039802-8039903)
chr3 (38-117)||(8383237-8383316)
chr3 (5-117)||(15796261-15796373)
chr3 (38-117)||(26492205-26492284)
chr3 (24-117)||(14829670-14829762)
chr3 (1-90)||(17005582-17005671)
chr3 (34-123)||(25948883-25948972)
chr3 (34-110)||(9800027-9800103)
chr3 (59-123)||(23870580-23870644)
chr3 (12-91)||(11665950-11666029)
chr3 (6-89)||(16789020-16789103)
chr3 (6-117)||(41961618-41961729)
chr3 (38-117)||(55401055-55401134)
chr3 (5-111)||(34185090-34185196)
chr3 (5-117)||(25064889-25064999)
chr3 (36-117)||(28917981-28918062)
chr3 (37-97)||(1509539-1509599)
chr3 (39-111)||(10268487-10268559)
chr3 (38-138)||(10318035-10318134)
chr3 (34-98)||(11313796-11313860)
chr3 (5-105)||(14832091-14832191)
chr3 (35-111)||(28678289-28678365)
chr3 (51-123)||(29112293-29112365)
chr3 (38-117)||(8587021-8587100)
chr3 (64-111)||(15544679-15544726)
chr3 (38-117)||(25093482-25093561)
chr3 (34-111)||(14747547-14747625)
chr3 (34-120)||(22774066-22774152)
chr3 (29-106)||(10455781-10455858)
chr3 (64-109)||(10504929-10504974)
chr3 (38-119)||(10954930-10955011)
chr3 (38-111)||(21479104-21479177)
chr3 (48-117)||(24205051-24205120)
chr3 (52-97)||(27277852-27277897)
chr3 (5-98)||(55212962-55213054)
chr3 (10-106)||(750590-750686)
chr3 (38-98)||(7928449-7928509)
chr3 (51-123)||(11493374-11493446)
chr3 (40-120)||(20503443-20503522)
chr3 (63-111)||(32400730-32400778)
chr3 (64-120)||(40052310-40052365)
chr3 (34-98)||(49651782-49651846)
[»] chr2 (44 HSPs)
chr2 (36-117)||(20539672-20539753)
chr2 (5-117)||(36756311-36756423)
chr2 (34-121)||(30527591-30527678)
chr2 (48-120)||(39323241-39323313)
chr2 (7-97)||(44860320-44860410)
chr2 (15-108)||(12668400-12668493)
chr2 (6-71)||(35056894-35056959)
chr2 (34-117)||(14996219-14996303)
chr2 (50-117)||(29663989-29664057)
chr2 (29-108)||(4882687-4882766)
chr2 (48-119)||(21374709-21374780)
chr2 (6-117)||(30717498-30717609)
chr2 (34-108)||(18420430-18420504)
chr2 (52-110)||(21782832-21782890)
chr2 (5-111)||(37419729-37419835)
chr2 (38-120)||(37558954-37559036)
chr2 (8-117)||(15657844-15657953)
chr2 (5-123)||(27084236-27084350)
chr2 (38-91)||(34691805-34691858)
chr2 (38-91)||(34714217-34714270)
chr2 (53-117)||(12940950-12941014)
chr2 (39-111)||(18841014-18841086)
chr2 (39-119)||(42832277-42832357)
chr2 (42-117)||(6940235-6940310)
chr2 (38-117)||(15972853-15972932)
chr2 (38-117)||(28677889-28677967)
chr2 (38-117)||(30404850-30404929)
chr2 (6-117)||(34784950-34785061)
chr2 (51-117)||(21616742-21616808)
chr2 (76-114)||(22550280-22550318)
chr2 (34-116)||(24894370-24894452)
chr2 (5-111)||(27286259-27286365)
chr2 (35-97)||(31456638-31456700)
chr2 (52-117)||(16069268-16069333)
chr2 (38-111)||(23921239-23921312)
chr2 (6-111)||(26769497-26769602)
chr2 (52-117)||(28412330-28412395)
chr2 (38-111)||(31018576-31018649)
chr2 (79-111)||(11977704-11977736)
chr2 (38-117)||(21624246-21624326)
chr2 (4-89)||(22084796-22084883)
chr2 (41-117)||(23718006-23718082)
chr2 (41-117)||(24105678-24105754)
chr2 (79-123)||(41047848-41047892)
[»] chr8 (41 HSPs)
chr8 (9-105)||(2572027-2572123)
chr8 (5-111)||(15816096-15816202)
chr8 (5-117)||(22651956-22652068)
chr8 (5-117)||(29510271-29510383)
chr8 (15-97)||(25172675-25172757)
chr8 (6-97)||(21465412-21465503)
chr8 (29-110)||(5307048-5307128)
chr8 (38-111)||(13844596-13844669)
chr8 (5-117)||(8343296-8343408)
chr8 (1-105)||(29447073-29447177)
chr8 (35-98)||(11927083-11927146)
chr8 (38-117)||(20873049-20873128)
chr8 (39-117)||(4673426-4673504)
chr8 (35-104)||(11944658-11944727)
chr8 (51-120)||(14134676-14134745)
chr8 (5-117)||(22197709-22197821)
chr8 (5-117)||(24362168-24362281)
chr8 (38-111)||(34897071-34897144)
chr8 (51-112)||(39954292-39954353)
chr8 (39-111)||(20679396-20679468)
chr8 (37-111)||(8342960-8343032)
chr8 (39-98)||(12606830-12606889)
chr8 (38-117)||(24669413-24669492)
chr8 (1-111)||(12570472-12570581)
chr8 (62-108)||(12936515-12936561)
chr8 (29-111)||(13436955-13437037)
chr8 (51-97)||(14731712-14731758)
chr8 (41-111)||(25192350-25192420)
chr8 (35-97)||(25566841-25566903)
chr8 (57-111)||(27101501-27101555)
chr8 (38-120)||(36450754-36450836)
chr8 (34-103)||(14634137-14634206)
chr8 (33-89)||(4122244-4122300)
chr8 (38-122)||(5813567-5813651)
chr8 (24-96)||(7442846-7442918)
chr8 (98-138)||(18964136-18964176)
chr8 (38-110)||(22595981-22596053)
chr8 (73-117)||(29776016-29776060)
chr8 (41-105)||(31236580-31236644)
chr8 (59-111)||(41838144-41838196)
chr8 (48-116)||(44067497-44067565)
[»] chr5 (39 HSPs)
chr5 (18-116)||(19579682-19579780)
chr5 (5-117)||(21522730-21522842)
chr5 (5-117)||(21533296-21533408)
chr5 (5-123)||(39698515-39698633)
chr5 (34-123)||(39205854-39205943)
chr5 (48-120)||(43001777-43001849)
chr5 (11-121)||(3966478-3966589)
chr5 (6-117)||(36642730-36642841)
chr5 (5-117)||(21542010-21542122)
chr5 (50-117)||(22013394-22013461)
chr5 (1-123)||(30098299-30098422)
chr5 (11-121)||(11685916-11686024)
chr5 (43-117)||(14674249-14674323)
chr5 (5-98)||(7677704-7677797)
chr5 (35-96)||(36838544-36838605)
chr5 (12-97)||(41091231-41091316)
chr5 (34-117)||(13287395-13287478)
chr5 (38-117)||(16203795-16203874)
chr5 (38-117)||(21191056-21191135)
chr5 (51-118)||(27144442-27144509)
chr5 (6-111)||(31084309-31084408)
chr5 (34-111)||(6035469-6035545)
chr5 (64-117)||(42488079-42488132)
chr5 (38-110)||(6247609-6247681)
chr5 (6-62)||(6401533-6401589)
chr5 (5-117)||(15410415-15410527)
chr5 (59-107)||(23220973-23221021)
chr5 (5-117)||(15382457-15382566)
chr5 (29-91)||(2236776-2236838)
chr5 (38-108)||(33178014-33178084)
chr5 (48-117)||(6326307-6326376)
chr5 (29-117)||(19552536-19552622)
chr5 (51-111)||(5467991-5468051)
chr5 (51-91)||(12927660-12927700)
chr5 (38-117)||(19820396-19820473)
chr5 (40-92)||(23012410-23012462)
chr5 (53-117)||(27932216-27932279)
chr5 (38-106)||(28588674-28588742)
chr5 (28-108)||(41633724-41633804)
[»] scaffold0008 (1 HSPs)
scaffold0008 (4-117)||(263338-263451)
[»] scaffold0053 (1 HSPs)
scaffold0053 (38-117)||(8778-8857)
[»] scaffold0044 (1 HSPs)
scaffold0044 (5-107)||(53170-53272)
[»] scaffold0123 (1 HSPs)
scaffold0123 (6-97)||(44493-44584)
[»] scaffold0004 (1 HSPs)
scaffold0004 (48-123)||(92781-92856)
[»] scaffold0722 (1 HSPs)
scaffold0722 (38-111)||(7032-7105)
[»] scaffold0103 (1 HSPs)
scaffold0103 (48-120)||(51788-51860)
[»] scaffold0223 (1 HSPs)
scaffold0223 (34-117)||(20152-20235)
[»] scaffold0697 (1 HSPs)
scaffold0697 (38-112)||(1629-1703)
[»] scaffold0122 (1 HSPs)
scaffold0122 (9-111)||(8652-8754)
[»] scaffold0050 (1 HSPs)
scaffold0050 (38-116)||(70259-70337)
[»] scaffold1528 (1 HSPs)
scaffold1528 (24-117)||(1015-1108)
[»] scaffold0652 (1 HSPs)
scaffold0652 (38-111)||(462-535)
[»] scaffold0376 (1 HSPs)
scaffold0376 (8-97)||(6312-6401)
[»] scaffold0236 (1 HSPs)
scaffold0236 (35-104)||(25765-25834)
[»] scaffold0019 (1 HSPs)
scaffold0019 (5-111)||(71709-71817)
[»] scaffold0020 (1 HSPs)
scaffold0020 (34-98)||(135308-135372)
[»] scaffold0306 (1 HSPs)
scaffold0306 (38-117)||(13380-13459)
[»] scaffold0171 (1 HSPs)
scaffold0171 (34-117)||(23400-23483)
[»] scaffold0152 (1 HSPs)
scaffold0152 (38-117)||(21868-21947)
[»] scaffold0049 (1 HSPs)
scaffold0049 (39-117)||(63752-63831)
[»] scaffold0086 (1 HSPs)
scaffold0086 (5-69)||(2956-3020)
[»] scaffold0018 (1 HSPs)
scaffold0018 (34-117)||(178814-178898)


Alignment Details
Target: chr4 (Bit Score: 158; Significance: 4e-84; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 4 - 212
Target Start/End: Complemental strand, 30838303 - 30838101
Alignment:
Q  4 tggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtg 103  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||       
T  30838303 tggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattatataattttatcaaattattagcagtatcgac--- 30838207  T
Q  104 tcagtgtcagtgtccgtgctgtgtctgttgtccgtattaatgcttcttagcttttatgtcttttgtgcttccattgttttgaaatttaaaccaatagtgt 203  Q
       || ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30838206 ---gtatcagtgtccgtgccgtgtctgttgtctttattaatgcttcttagcttttatgtcttttgtgcttccattgttttgaaatttaaaccaatagtgt 30838110  T
Q  204 aagaaaata 212  Q
    |||||||||    
T  30838109 aagaaaata 30838101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 19482759 - 19482648
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    ||||||||||||||||| |||||| || ||||||||||| | |||| ||||| |||  |||||| | || || ||||||||||||  |||||| ||||||    
T  19482759 gtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtc 19482660  T
Q  106 agtgtcagtgtc 117  Q
    |||||| |||||    
T  19482659 agtgtctgtgtc 19482648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 22234853 - 22234976
Alignment:
Q  1 tcctggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatat-aattttatcaaattattagcagtgtcga 99  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||| || || |||| |||| |||||| | | |||| ||||||| ||||| ||||||     
T  22234853 tcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcgg 22234952  T
Q  100 cgtgtcagtgtcagtgtccgtgct 123  Q
    |||||| ||||| || ||||||||    
T  22234953 cgtgtccgtgtccgtatccgtgct 22234976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 2361975 - 2362054
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| ||||||||||| ||||||| ||||||||||||| ||||||  |||||| ||||| ||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtcaatgtc 2362054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 5414140 - 5414251
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||| ||||||| ||||  ||| | | ||||| | |||  |||||| |||||| ||||||    
T  5414140 gtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 5414239  T
Q  106 agtgtcagtgtc 117  Q
     ||||| |||||    
T  5414240 cgtgtccgtgtc 5414251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 35952613 - 35952684
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    |||||||||| ||||| ||||||| || | |||||||| ||||||||||||||||||||||| || ||||||    
T  35952613 gacacgacactgatacatataattacattgaattatatgattttatcaaattattagcagtggcggcgtgtc 35952684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 30982845 - 30982931
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagc 91  Q
    |||||||||||||||||| |||  |||| ||||||||||||| |||||||||| |||| || ||| | ||||| |||||| ||||||    
T  30982845 ggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagc 30982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 904013 - 903908
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    ||||||||||| ||||| ||||||||| || |||| || ||||| ||||||| |||| |||||| | ||||| ||||||||||| | ||| ||  |||||    
T  904013 gtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtc 903914  T
Q  106 agtgtc 111  Q
    ||||||    
T  903913 agtgtc 903908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 30299008 - 30298923
Alignment:
Q  36 cacgacaccgatacttataatttcactaaattatataattttat-caaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    ||||||||||| |||| ||||| |||| |||||| | ||||| | |||||||||||| |||||| |||||||||||| ||||||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 30298923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 30327876 - 30327791
Alignment:
Q  36 cacgacaccgatacttataatttcactaaattatataattttat-caaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    ||||||||||| |||| ||||| |||| |||||| | ||||| | |||||||||||| |||||| |||||||||||| ||||||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 30327791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 16303263 - 16303339
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||||||||| |||| ||||| ||||||||||||| ||||| ||||| ||||| |  ||||| ||||||||||||    
T  16303263 acacgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtc 16303339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24613664 - 24613768
Alignment:
Q  1 tcctggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgac 100  Q
    |||||||||| ||||||||||| |||  |||| |||| |||||||| |||| || || || | |||||| | ||||| ||||||||||||  ||||||||    
T  24613664 tcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcgac 24613763  T
Q  101 gtgtc 105  Q
    |||||    
T  24613764 gtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 21945562 - 21945483
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||| |||||| | |||||||||| |||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtc 21945483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 27706148 - 27706250
Alignment:
Q  9 tcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagt 108  Q
    ||||| |||||||| |||| ||| | |||||||||  | |||| ||||| ||||||||||| | ||||| | |||||||||   ||||||||||||||||    
T  27706148 tcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagt 27706247  T
Q  109 gtc 111  Q
    |||    
T  27706248 gtc 27706250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 14126121 - 14126190
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||| |||| |||||| | | ||||||||||||||| |||||||| ||||| |||||| |||||    
T  14126121 acttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtc 14126190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 19312427 - 19312370
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcact 62  Q
    ||||||||||||||||||  ||| |||  |||||||||||||||||||||||| ||||    
T  19312427 ggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacact 19312370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 21873340 - 21873430
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    ||||||||||||||||| ||||| | ||  |||||| ||||  ||  ||||||||||| |||||| | |||||||||||||||| ||||||||    
T  21873340 ggtgtcggacacgtgtcacgtccgagaccaacacgataccggcac--ataatttcactgaattatgtgattttatcaaattatttgcagtgtc 21873430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 21929201 - 21929291
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    ||||||||||||||||| ||||| | ||  |||||| ||||  ||  ||||||||||| |||||| | |||||||||||||||| ||||||||    
T  21929201 ggtgtcggacacgtgtcacgtccgagaccaacacgataccggcac--ataatttcactgaattatgtgattttatcaaattatttgcagtgtc 21929291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 35157986 - 35158063
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgt 116  Q
    |||||||| |||||||||| ||||||||||| | |||||  |||||||||||  | |||| |||||||||||| ||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgt 35158063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 5832716 - 5832760
Alignment:
Q  60 actaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||    
T  5832716 actaaatcatatgattttctcaaattattagcagtgtcgacgtgt 5832760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 7012139 - 7012032
Alignment:
Q  24 gtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgct 123  Q
    |||| |||| ||||| |||||||||| ||| ||  |||| |||||| | ||||| ||||||||||| | |||||| |||||| ||||| ||||||   ||    
T  7012139 gtccgacaccgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgtgtcctgtct 7012040  T
Q  124 gtgtctgt 131  Q
    ||||||||    
T  7012039 gtgtctgt 7012032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 23292986 - 23293065
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| |||||  ||| |||||| | ||||| ||||||||||||| |||||| ||||||| |||| |||||    
T  23292986 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtc 23293065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 4383435 - 4383342
Alignment:
Q  29 acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgct 123  Q
    |||| |||||||||| || | || ||||| |||| |||||| | ||||| ||||||||||||  || |||||||||||||||| || ||||||||    
T  4383435 acaccgacacgacactgacatttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtcagtgtccgtatccgtgct 4383342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 51701340 - 51701258
Alignment:
Q  15 acgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||||||| || | |||| ||||||||||  | |||| ||||| |||| |||||| ||||||| ||||||||||||| |||||    
T  51701340 acgtgtcgtgttcgacaccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 848036 - 847931
Alignment:
Q  12 gacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||| ||| |||| ||||  ||| |||||||| |||| |||||  | | |||||| ||||||| ||||||||||||| |  ||| ||||||||||||    
T  848036 gacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtc 847937  T
Q  112 agtgtc 117  Q
     |||||    
T  847936 tgtgtc 847931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 13134513 - 13134444
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtg 103  Q
    ||||||||| ||| || ||||||| ||||||||||| | ||||| | ||||||| |||||||||| ||||    
T  13134513 gacacgacatcgacacatataattacactaaattatgtgattttcttaaattataagcagtgtcggcgtg 13134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 15029824 - 15029751
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||| | || ||||||| |||| |||||| | || || |||||||||||||||||||  ||||||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 20633508 - 20633471
Alignment:
Q  74 ttttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtc 20633471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 46083965 - 46084022
Alignment:
Q  12 gacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattat 69  Q
    ||||||||||| |||| | |||||||||||||||| || ||||||| ||||| |||||    
T  46083965 gacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagattat 46084022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 56257978 - 56257933
Alignment:
Q  52 ataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||||| |||| |||||||| ||||| |||||||||||||||||||    
T  56257978 ataattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 8423718 - 8423778
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcg 98  Q
    ||||||||| | |||||||| |||| |||||| | ||||| ||||||||||||| ||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcg 8423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 11651155 - 11651207
Alignment:
Q  59 cactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||| |||||| | ||||| | ||||||||||| |||||||||||||||||||    
T  11651155 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtc 11651207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 12895274 - 12895342
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtca 106  Q
    ||||||||| |||||||||| ||| ||||||| | ||||| |||||||||||   |||||| |||||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtca 12895342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 40742659 - 40742599
Alignment:
Q  29 acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattatta 89  Q
    |||| ||||||||| ||| || ||||||| ||||| ||||||| ||||| |||||||||||    
T  40742659 acaccgacacgacatcgacacatataattacactagattatatgattttctcaaattatta 40742599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 54580023 - 54580075
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattag 90  Q
    ||||||||| |||||||||| |||| |||||| | ||||| ||||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 241686 - 241574
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||||||| |||| ||||  |||||||||||| ||| |||||| ||||||||||| | |||||  |||||||||||| |||||| |||||    
T  241686 ggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgt 241587  T
Q  105 cagtgtcagtgtc 117  Q
    ||||||| |||||    
T  241586 cagtgtccgtgtc 241574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 5236049 - 5235966
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||||||||  ||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||||||||| |||||    
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtc 5235966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 24339734 - 24339628
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||||||| |||||||| |||| |||| ||||||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||| |||||| |||||    
T  24339734 ggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 24339635  T
Q  105 cagtgtc 111  Q
    || ||||    
T  24339634 caatgtc 24339628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 32308212 - 32308106
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||||||||| |||||| ||||||||| |||||||||| || || || |||| |||| |||||| | ||||| ||||||||||||| |||||| |||||    
T  32308212 ggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 32308113  T
Q  105 cagtgtc 111  Q
    |||||||    
T  32308112 cagtgtc 32308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 27945105 - 27945021
Alignment:
Q  33 tgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||||||| |||| ||||| |||| |||||| ||||||| ||||||||||||  |||||| |||||||||||| |||||    
T  27945105 tgacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtc 27945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 7328687 - 7328770
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||||| || ||||||| ||||||||||| | ||||| |||||||||||||||| ||||||||| | |||| |||||    
T  7328687 gacacgacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtc 7328770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15902918 - 15902802
Alignment:
Q  1 tcctggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgac 100  Q
    ||||||| |||| || |||||| |||| | || ||||| ||||||| || ||||||| ||||||||||| | |||||||||||||||||   |||||| |    
T  15902918 tcctggtctcgggcatgtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggc 15902819  T
Q  101 gtgtcagtgtcagtgtc 117  Q
     |||||||||| |||||    
T  15902818 atgtcagtgtctgtgtc 15902802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27229274 - 27229360
Alignment:
Q  1 tcctggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattatt 88  Q
    |||| |||||| |||||| ||| |||  ||| ||||||||||||||||||||||||| ||||||||||| | |||||| |||||||||    
T  27229274 tcctagtgtcgaacacgtatcgtgtctgacagtgacacgacaccgatacttataattacactaaattatgtgatttta-caaattatt 27229360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 11831516 - 11831424
Alignment:
Q  13 acacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    |||| ||||| |||| |||| || |||||||  |||||| ||||| ||||||||||||| ||||| ||||||||||||  ||||||| |||||    
T  11831516 acacatgtcgtgtccgacaccgatacgacacgaatacttgtaattacactaaattatatgattttttcaaattattagttgtgtcgatgtgtc 11831424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 5409809 - 5409909
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||||||| ||||      ||||||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||| || ||  |||||    
T  5409809 ggtgtcggacacgtgtcgtgtcc------gacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgt 5409902  T
Q  105 cagtgtc 111  Q
    |||||||    
T  5409903 cagtgtc 5409909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 13770754 - 13770671
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| ||| |||| ||||| |||| |||||| ||||||| | ||||||||||| |||||| ||| |||||||| |||||    
T  13770754 gacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtc 13770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 21930717 - 21930615
Alignment:
Q  8 gtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcag 107  Q
    ||||||||||| | | ||||||||||||||||||| ||| |||| |||||  | | |||||| ||||||| | ||||||||||| | |||| ||||||||    
T  21930717 gtcggacacgtcttgtgtccaacactgacacgacatcgacacttgtaattaaaatgaattatctaatttt-ttaaattattagctgagtcggcgtgtcag 21930619  T
Q  108 tgtc 111  Q
    ||||    
T  21930618 tgtc 21930615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 26733363 - 26733284
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| || | |||||  ||| |||||| | ||||| ||||||||||||| ||||||||||||||||||| |||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtc 26733284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 10042999 - 10042917
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| || |||||||||| | ||||||||| | | ||||||||||||||||  |||||| ||||| |||||| |||||    
T  10042999 acacgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtc 10042917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 11061077 - 11061155
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||| |||| |||||  |||||||||| | ||||| ||||||||||||| ||||||  ||||||||||| |||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtc 11061155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 15680868 - 15680786
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    ||||||||| |||||||||| ||||||||||| | ||||| |  ||||||||||  ||||| ||||||||||||  |||||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtccatgtccgt 15680786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 11665407 - 11665492
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattag 90  Q
    |||||||||||||||||| || | |||| |||| |||| ||| ||||||||||  ||| |||||| | ||||| ||||||||||||    
T  11665407 ggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattag 11665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 28155629 - 28155544
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgct 123  Q
    ||||||||| |||| ||||| |||  |||||| ||||||| ||||||||||||| |||||| |||||  | |||||| ||||||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgttcgagtcagtatccgtgct 28155544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 43027463 - 43027548
Alignment:
Q  32 ctgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||||||| |||| || || ||||  ||||| | ||||| ||||||||||||| | |||| |||||||||||| |||||    
T  43027463 ctgacacgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtc 43027548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 2334340 - 2334238
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataa--ttttatcaaattattagcagtgtcgacgtg 103  Q
    |||||||||| |||||| |||| |||| ||||||||||||| |||| ||||| ||||||||||| | |  |||| ||||||||||| |  ||||| ||||    
T  2334340 gtgtcggacatgtgtcgtgtccgacac-gacacgacaccgacacttgtaattacactaaattatgtgattttttttcaaattattaactttgtcgccgtg 2334242  T
Q  104 tcag 107  Q
    ||||    
T  2334241 tcag 2334238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 1433517 - 1433434
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||||| || ||||||| ||| |||| || | ||||| ||||||||||| | |||||| ||||||| |||| |||||    
T  1433517 gacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtc 1433434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 3721152 - 3721074
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| || |||||||  |||||||||| | ||||| |||||||||||||| ||||||  |||||||||| |||||    
T  3721152 cgacaccgacacatataattatactaaattatgtgattttctcaaattattagca-tgtcgaaatgtcagtgtccgtgtc 3721074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 6028716 - 6028605
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    |||||| || ||||||| || | |||||||||||||||||| | || ||||| || |||||||| | || || ||||||||||| |  | |||| |||||    
T  6028716 gtgtcgaactcgtgtcgtgttcgacactgacacgacaccgacatttgtaattacattaaattatgttatattttcaaattattaaccatatcgatgtgtc 6028617  T
Q  106 agtgtcagtgtc 117  Q
    |||||| |||||    
T  6028616 agtgtctgtgtc 6028605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 6630878 - 6630985
Alignment:
Q  4 tggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtg 103  Q
    ||||||||| ||||||| | |||| ||||  |||||||| ||| || ||||||| |||| |||||  | | ||| ||||||||||||  |||||| ||||    
T  6630878 tggtgtcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtg 6630977  T
Q  104 tcagtgtc 111  Q
    ||||||||    
T  6630978 tcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 24105737 - 24105658
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||| |||| |||| ||||| |||| ||| ||  |||||| ||||||||||||| |||||| |||||||||||| |||||    
T  24105737 cgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 24105658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 26329354 - 26329461
Alignment:
Q  10 cggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtg 109  Q
    ||||||||||||| |||  |||| |||||||| |||| || ||||||| |||| |||| | |  |||| ||||||||||| |  ||||| ||||||||||    
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtg 26329453  T
Q  110 tcagtgtc 117  Q
    || |||||    
T  26329454 tctgtgtc 26329461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 9408333 - 9408407
Alignment:
Q  37 acgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||||||| |||| ||||| ||||||||||| | ||||| |||||||||||   ||||||  |||||||||||    
T  9408333 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 22484083 - 22484005
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||| || |||||||  ||| ||||||  |||||| | ||||||||||| |||||| |||||||||||| |||||    
T  22484083 gacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtc 22484005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 26033432 - 26033514
Alignment:
Q  9 tcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagc 91  Q
    |||||||||||||  |||  |||| ||||||| ||||| |||| ||||| |||| |||||| | ||||| |||||||||||||    
T  26033432 tcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 4017804 - 4017873
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||| ||| |||||||||||||  |||| ||||||||||| | |||||| |||||| ||||| |||||    
T  4017804 acttatgattacactaaattatatcgttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtc 4017873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 21880211 - 21880158
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagc 91  Q
    ||||||||| |||| ||||| |||| |||||| ||||||| |||||||||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 25481961 - 25481888
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||| | |||| ||||| |||| |||||| | ||||| ||||||||||||| |||||| ||||||| ||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtc 25481888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 42720903 - 42720964
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtca 112  Q
    ||||||| || | |||||| | ||||| ||||||||||||| ||||| ||||||||||||||    
T  42720903 tataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgtca 42720964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 43250042 - 43249973
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||| ||||  ||||| | ||||| ||||||||||| | |||||| |||||||||||| |||||    
T  43250042 acttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtc 43249973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 1401083 - 1401031
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagc 91  Q
    ||||||||||||||||||| |||| |||||| | | ||| |||||||||||||    
T  1401083 gacaccgatacttataattacactgaattatgtgagtttctcaaattattagc 1401031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 8160484 - 8160416
Alignment:
Q  29 acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||| ||||||| ||| | || ||||||| ||||||||||| ||||||| | ||||||||||| |||||    
T  8160484 acaccgacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgtc 8160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 19992061 - 19992001
Alignment:
Q  37 acgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||||||||| |||||||||| |||| || ||| | ||||| ||||||||||||| |||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 20549850 - 20549778
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgt 110  Q
    ||||||||| || ||||||| |||| |||||  | ||||| ||||||||||||| ||||||  ||||||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 16766789 - 16766683
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||||| | |||| |||| ||||||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||| |||||| |||||    
T  16766789 ggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 16766690  T
Q  105 cagtgtc 111  Q
    |||||||    
T  16766689 cagtgtc 16766683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 3398680 - 3398599
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||||||||||||||| |||| |||||||| ||||| ||||||||||||| |||||| |||||||||||| |||||    
T  3398680 acacgacaccgatacttataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 3398599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 7723240 - 7723324
Alignment:
Q  28 aacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtca 112  Q
    ||||| |||||||||||||||| |||||||   || |||||||| ||||| ||||||||||||||||||| ||||||||||||||    
T  7723240 aacaccgacacgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagtgtca 7723324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 7938174 - 7938102
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||||| |||||||||| ||||||||||||| ||||| ||||||||||||| |||||| ||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtc 7938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 7086860 - 7086775
Alignment:
Q  32 ctgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||| ||||||| || ||||||| ||||||||||| | ||||| ||||||||||||||||| ||||||||| ||||| |||||    
T  7086860 ctgacactacaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtc 7086775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 8365487 - 8365598
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    ||||||||||||||||| |||| | || ||||||||||||| |||| ||||| |||  |||||| | || || ||||||||||||  |||||| ||||||    
T  8365487 gtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtc 8365586  T
Q  106 agtgtcagtgtc 117  Q
    |||||| |||||    
T  8365587 agtgtccgtgtc 8365598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 12696387 - 12696304
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||| || |||| ||||| |||| |||||| ||||||| ||||||||||||| |||||| |||||||||||| |||||    
T  12696387 gacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 12696304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 17841589 - 17841671
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    ||||||||  |||| ||||| ||||||||||| | ||||| ||||||||||||| |||||| |||||||||||| ||||||||    
T  17841589 cgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 17841671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 25038036 - 25038150
Alignment:
Q  3 ctggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgt 102  Q
    |||||||||||||||||||| |||  ||||  |||| | ||||| | || ||||| ||||||||||| ||||||| ||||||||||| | ||||| ||||    
T  25038036 ctggtgtcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtcaacgt 25038135  T
Q  103 gtcagtgtcagtgtc 117  Q
    |||||| || |||||    
T  25038136 gtcagtatctgtgtc 25038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 9107337 - 9107449
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||||||||||  || | |||| |||| ||||||||||||| |||| ||||| |||| |||| | | ||||| ||||||||||||| |||||| |||||    
T  9107337 ggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgt 9107436  T
Q  105 cagtgtcagtgtc 117  Q
     |||||| |||||    
T  9107437 tagtgtccgtgtc 9107449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 7625181 - 7625102
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||| | |||||||  |||||||||||| ||||| ||||||||||| | ||||||||||||| ||||| |||||    
T  7625181 cgacaccgattcctataattatactaaattatatcattttctcaaattattatccgtgtcgacgtgtcggtgtctgtgtc 7625102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 21395294 - 21395380
Alignment:
Q  24 gtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||| |||||||||||||||||| |||| ||||| ||||||||||| | ||||| ||||||||||||| |||| | |||||| |||||    
T  21395294 gtccgacactgacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtc 21395380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 7977830 - 7977900
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagt 108  Q
    ||||||||| |||| ||||| |||| |||||| ||||||| ||||||||||||| |||||| |||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 8805568 - 8805651
Alignment:
Q  32 ctgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||| ||||||| ||  |||||| ||||||||||| | ||||| ||||||||||||||||| ||||||||| ||||| |||||    
T  8805568 ctgacactacaccgacac--ataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtc 8805651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 5970077 - 5970182
Alignment:
Q  7 tgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtca 106  Q
    ||||||| | |||||| |||| |||| ||||||||||| | | || ||||| |||| |||||| | ||||| ||||||||||| | |||||||||||||     
T  5970077 tgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtcc 5970176  T
Q  107 gtgtca 112  Q
    ||||||    
T  5970177 gtgtca 5970182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 7996378 - 7996451
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||||||  | ||||||| |||| |||||||| ||||| |||||||||||||||||||| | ||||||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtc 7996451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 8022423 - 8022350
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||||||  | ||||||| |||| |||||||| ||||| |||||||||||||||||||| | ||||||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtc 8022350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 9195751 - 9195820
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||| || ||||||| ||||||||||| | ||||| |||||||||||| |||||||| ||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcgatgtgt 9195820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 31385011 - 31384927
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattag 90  Q
    ||||| |||||||||||| |||||||||| ||||||||| || |||| ||||| |||| |||||| | ||||| ||||||||||||    
T  31385011 ggtgtaggacacgtgtcgtgtccaacact-acacgacactgacacttgtaattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 9025490 - 9025553
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    ||||||||||||| || ||||||| |||| |||||| | ||||| |||||||||||||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 9027241 - 9027158
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||||| || ||||||| |||  |||||| | ||| | ||||||||||||| |||||| |||||||||||| |||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtc 9027158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 10770668 - 10770747
Alignment:
Q  32 ctgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||  |||| | ||||||||||||    
T  10770668 ctgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtc 10770747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 677900 - 677818
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgt 116  Q
    ||||||||||| |  | ||||| | ||||| ||||||| ||||| ||||||||||| |||||||| |||||||||||| ||||    
T  677900 gacacgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgtcagtgtctgtgt 677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 1532286 - 1532225
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagc--agtgtcgacgtgtcagtgt 110  Q
    ||||||| |||| |||||| |||||||||||||||||||||   ||||||||||||||||||    
T  1532286 tataattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgt 1532225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 7930369 - 7930291
Alignment:
Q  33 tgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||||||||||| ||||  |||||||||||||||| | ||||| |||||||||||   |||||| | ||||||||||    
T  7930369 tgacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtc 7930291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 10842570 - 10842508
Alignment:
Q  59 cactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtg 121  Q
    ||||||||||| | ||||| ||||||||||||| |||||| |||||| |||||| ||||||||    
T  10842570 cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtcaatgtccgtg 10842508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 13851782 - 13851716
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||| |||| |||||  | ||||| ||||||||||||| ||||||||||||||||||| |||||    
T  13851782 tataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtc 13851716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 24138488 - 24138426
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||| |||||||||| ||||| | |||| |||||||| ||||| |||||||||||||||||||    
T  24138488 acacaacaccgatacatataaatacacttaattatatgattttttcaaattattagcagtgtc 24138426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 5732510 - 5732583
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||| || ||||||| ||||||| ||| | ||||| ||||||||||| | |||||| ||||||||||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtc 5732583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 7265593 - 7265666
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||| || ||||||| |||| |||||| | ||||| ||||||||||||| |||| | ||||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 9522983 - 9522898
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattag 90  Q
    ||||||||||||||||||  ||| |||| ||||| ||||||| |||| ||||| |||| |||||| | ||||| | ||||||||||    
T  9522983 ggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 17341674 - 17341735
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtg 109  Q
    |||||||||| |||| |||||| | ||||||||||||||||| | |||||| ||||||||||    
T  17341674 acttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtg 17341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 26562757 - 26562676
Alignment:
Q  29 acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgt 110  Q
    |||| ||||||||| ||| || ||||||| |||| |||||| | ||||| ||||||| |||||||||||| |||||| ||||    
T  26562757 acaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgt 26562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 17168484 - 17168536
Alignment:
Q  59 cactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||||||| ||||| ||||||||||| |||||| | ||||||||||||    
T  17168484 cactaaattatatcattttctcaaattattatcagtgttggcgtgtcagtgtc 17168536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 28152157 - 28152078
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtcc 118  Q
    ||||||||| |||| ||||| |||| |||||| | ||||| |||||||||||||  ||||| |||||||||||| ||||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattagctttgtcggcgtgtcagtgtccgtgtcc 28152078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 33001289 - 33001357
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtca 106  Q
    ||||||||| || ||||||| || | |||||| | ||||| |||||||||||||||||||| |||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 426514 - 426593
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| || | |||||| | ||||| ||||||||||| | |||||| |||||||||||| |||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtc 426593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 10888970 - 10889053
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||  | || ||||||  ||||||||||| | ||||||||||||||||||| ||||| | ||||| ||||| |||||    
T  10888970 gacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgtctatgtgtcggtgtccgtgtc 10889053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 17435290 - 17435179
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    |||||| |||||||||| |||| |||  ||||  ||||  | |||| ||||| |||| |||||| ||||||| | |||||||||||  ||||||||| ||    
T  17435290 gtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatc 17435191  T
Q  106 agtgtcagtgtc 117  Q
    |||||| |||||    
T  17435190 agtgtccgtgtc 17435179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 34595193 - 34595114
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||  |||||| ||||||| |||| |||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtc 34595114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 6389781 - 6389723
Alignment:
Q  59 cactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||||| ||||| ||||||||||| | |||||| ||||| |||||| |||||    
T  6389781 cactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtc 6389723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 9658925 - 9658859
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||| |||| |||||| | ||||| | ||||||||||| |||||| |||||||||||| |||||    
T  9658925 tataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtc 9658859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 10760876 - 10760914
Alignment:
Q  73 attttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  10760876 attttctcaaattattatcagtgtcgacgtgtcagtgtc 10760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 19040411 - 19040341
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagt 108  Q
    |||||| || || ||||||| |||| |||||| | ||||| ||||||||||||| |||||| |||||||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 34447374 - 34447436
Alignment:
Q  54 aatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgt 116  Q
    |||| ||||||||||||| ||||||||||||||||| | |||| | ||||||| |||| ||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgttggcgtgtcattgtctgtgt 34447436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 853859 - 853928
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcag 107  Q
    ||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||  |||||| ||||||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcag 853928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 6898281 - 6898354
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||| |||| ||||| |||| |||||| ||||||  ||||||||||||  |||||  ||||||||||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgtc 6898354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 10339093 - 10339198
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataattt-cactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||| |||||| |||| |||| |||||| ||| || || |||||||  |||| |||||| | ||||| |||||||| | || |||||| |||||    
T  10339093 gtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgt 10339192  T
Q  105 cagtgt 110  Q
    ||||||    
T  10339193 cagtgt 10339198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 15489733 - 15489810
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgt 116  Q
    |||||||| |||| ||||| || | |||| | ||||||| ||||||||||||  |||||||||||| |||||| ||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgt 15489810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 16833365 - 16833288
Alignment:
Q  40 acaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||| |||| ||||| |||| || ||| | ||||| ||||||||||||  |||||| |||||||||||| |||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtc 16833288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 24614453 - 24614404
Alignment:
Q  54 aatttcactaaattatataattttatcaaattattagcagtgtcgacgtg 103  Q
    |||| ||||||||||||||||||| | ||||||||||| || ||||||||    
T  24614453 aattacactaaattatataatttttttaaattattagcggtatcgacgtg 24614404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 13689505 - 13689565
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||| ||| ||||| ||| ||||||||||||||||||| |||| || || ||||||||    
T  13689505 tataattacacgaaattgtatgattttatcaaattattagcggtgttgatgtatcagtgtc 13689565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 19044530 - 19044450
Alignment:
Q  31 actgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||| |||||||| || ||||||  |||| |||||| | || || ||||||||||||  |||||| ||||||||||||    
T  19044530 actgacatgacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtc 19044450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 21924935 - 21924995
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcg 98  Q
    ||||||||| || ||||||| |||| |||||| | || || ||||||||||||||||||||    
T  21924935 cgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcg 21924995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 26178683 - 26178759
Alignment:
Q  40 acaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgt 116  Q
    ||||||| || ||| ||| ||||||||||| | |||||||||||||||||| |||| || | ||||| |||| ||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattagaagtgacggcttgtcaatgtccgtgt 26178759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 9629867 - 9629973
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||||||||| |||||| |||| |||  ||||||||||||| |||||||||  |||| |||||||| ||||||||||||||||||| ||||||| ||||    
T  9629867 ggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgt 9629966  T
Q  105 cagtgtc 111  Q
    | |||||    
T  9629967 cggtgtc 9629973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 46348383 - 46348465
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    ||||||||| |||| ||||| ||||||||||||| ||||| ||||||||||||| |||||| |||||||||||| ||||||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 46348465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 40917841 - 40917731
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||||||| ||||||||| ||||||||||||| |||| ||||| |||| |||  | | ||||| ||||||||||||| |||||| |||||    
T  40917841 ggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat--tgtgattttttcaaattattagctgtgtcggcgtgt 40917744  T
Q  105 cagtgtcagtgtc 117  Q
    |||| || |||||    
T  40917743 cagtatccgtgtc 40917731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 18556424 - 18556538
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    |||||||| |||||||| |||  |||| | ||||||||| |||||| ||||| || |||||||| | || || ||||||||||||| |||||| ||||||    
T  18556424 gtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtc 18556523  T
Q  106 agtgtcagtgtccgt 120  Q
    |||||| ||||||||    
T  18556524 agtgtccgtgtccgt 18556538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 6612134 - 6612250
Alignment:
Q  1 tcctggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgac 100  Q
    |||||||||||||||| | ||| |||| |||  ||||||||||||| |||| ||||| |||| |||||| ||||||| ||||||||||| | || ||| |    
T  6612134 tcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggc 6612233  T
Q  101 gtgtcagtgtcagtgtc 117  Q
    |||||| |||| |||||    
T  6612234 gtgtcattgtccgtgtc 6612250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 9828136 - 9828036
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||||||| |||  |||| ||||||||||||| || || |||| |||| |||||| | ||||||||||||||||||  |||||| |||||    
T  9828136 ggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgt 9828037  T
Q  105 c 105  Q
    |    
T  9828036 c 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 37055853 - 37055935
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||| || ||||||| ||||| ||||||||||| ||||||| |||||||||||||||| |||| || |||||||| |||||    
T  37055853 acacgatactgatacttgtaattacactaaattatgtaattttctcaaattattagcagtatcgatgtatcagtgtctgtgtc 37055935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 1486682 - 1486788
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||||||| ||||      ||||||||||||| |||||||||| |||| |||||| | ||||| ||||||||||||| |||||  |||||    
T  1486682 ggtgtcggacacgtgtcgtgtcc------gacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgt 1486775  T
Q  105 cagtgtcagtgtc 117  Q
    |||| || |||||    
T  1486776 cagtatccgtgtc 1486788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16164278 - 16164366
Alignment:
Q  1 tcctggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattatta 89  Q
    |||||||||||||||||||| |||||||||||  ||||||||  || || ||||||| || |||||||| | ||||| |||||||||||    
T  16164278 tcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 41877470 - 41877549
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| ||||||||||| ||||||| ||||||||||||| |||||| |||  ||||||| |||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtc 41877549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 36878519 - 36878437
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtg 121  Q
    |||||||| || ||||||| |||| |||||| | ||||| ||||||||||||| |||||| ||||||||||||  ||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtg 36878437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 22881616 - 22881689
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||| |||| ||||| ||||||||||| | ||||| ||||||||||||  |||||| ||||||||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 38078661 - 38078742
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccg 119  Q
    ||||||||| |||| ||||| || | |||||| | ||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccg 38078742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 5376496 - 5376579
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||||| |||| ||||| |||| |||||| | ||||| | ||||||||||| |||||| ||||| |||||| |||||    
T  5376496 gacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtc 5376579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 5927340 - 5927419
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||| || |||| ||||| || |||||||||| ||||| ||||||||||||||||||   |||||||||||| |||||    
T  5927340 cgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtc 5927419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 5944375 - 5944261
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataa--ttttatcaaattattagcagtgtcgacgt 102  Q
    ||||||||||| |||| | ||||  ||  ||||||||||||| |||||||||| |||| |||||| | |  |||| ||||||||||||| ||| || |||    
T  5944375 ggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgt 5944276  T
Q  103 gtcagtgtcagtgtc 117  Q
    ||||||||| |||||    
T  5944275 gtcagtgtctgtgtc 5944261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 22907341 - 22907412
Alignment:
Q  40 acaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||| ||||||||||  || ||||||||||||||| ||||||||||| | | ||||||||||| |||||    
T  22907341 acaccgacacttataattataccaaattatataattttctcaaattattaacggcgtcgacgtgtctgtgtc 22907412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 40181930 - 40181871
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||||||||||| ||||||| |||| |||||| | ||||| |||||||||||||||||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 398778 - 398844
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||| |||| |||||| | ||||| ||||||||||||| |||||| |||||||||||| |||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtc 398844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 6427422 - 6427336
Alignment:
Q  25 tccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||| ||||||||||||| | || ||||||| || | |||||| | ||||| ||||||||||||| |||| | ||||||||||||    
T  6427422 tccaaccctgacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 6427336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 16927198 - 16927264
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||| |||| |||||||| ||||| |||||||||||||  || ||||||||||||||| |||||    
T  16927198 tataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtc 16927264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 21530748 - 21530674
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtca 112  Q
    ||||||||| ||||||||||  || ||||||||| ||||| ||||||||||| | |||||| |||||| ||||||    
T  21530748 cgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtctgtgtca 21530674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 47989587 - 47989478
Alignment:
Q  7 tgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtca 106  Q
    |||| |||| |||||| |||| |||| ||||||||||||| |||| ||||| |||| |||||| | ||||| | |||||||||   |||||| |||||||    
T  47989587 tgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtca 47989489  T
Q  107 gtgtcagtgtc 117  Q
    ||||| |||||    
T  47989488 gtgtctgtgtc 47989478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 48450592 - 48450666
Alignment:
Q  43 ccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||||| |||| | |||||||||||| |||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtc 48450666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 113362 - 113289
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcag 107  Q
    ||||||||||| | |||| ||||| |||| |||||| | ||||| ||||||||||||| |||||| ||||||||    
T  113362 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 17754384 - 17754291
Alignment:
Q  24 gtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| ||||| |||| || || |||| || |||| |||||| ||||||| ||||||||||||| ||||||  ||||||| ||| |||||    
T  17754384 gtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtc 17754291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 22515887 - 22515960
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||| |||| ||||| ||||||||||| | ||||| ||||||||||||| |||||  |||||| |||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtc 22515960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 29144368 - 29144441
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtg 121  Q
    |||| ||||| ||||  ||||| || |||| ||||||||||||| |||||| ||| ||||||||||||||||||    
T  29144368 acttgtaattacactgcattatctatttttttcaaattattagctgtgtcggcgtatcagtgtcagtgtccgtg 29144441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 32461432 - 32461548
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    ||||| ||||||||||| |||| |||| ||||| ||||| | |||| ||||| || |||||||| | ||||| ||||||||||||  ||| || ||||||    
T  32461432 gtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaattatgtgattttttcaaattattagttgtgccggcgtgtc 32461530  T
Q  106 agtgtcagtgtccgtgct 123  Q
    | |||| || ||||||||    
T  32461531 actgtctgtatccgtgct 32461548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 34712379 - 34712440
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtg 95  Q
    |||||||||| || || ||||||| ||||||||||| | ||||| |||||||||||||||||    
T  34712379 gacacgacactgacacatataattacactaaattatgttattttctcaaattattagcagtg 34712440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 2851061 - 2851002
Alignment:
Q  57 ttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||| |||||| ||||||||||||||||||||| |||| ||||||||||| || |||||    
T  2851061 ttcactgaattatgtaattttatcaaattattagcggtgt-gacgtgtcagtatccgtgtc 2851002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 39130767 - 39130835
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtca 106  Q
    ||||||||| || ||||||| ||||||||||||||||||| | |||||||||  ||||||  |||||||    
T  39130767 cgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtca 39130835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 3490400 - 3490463
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||| ||||| |||| ||| || || |||| |||||||||||||||||||| ||||||||||||    
T  3490400 acttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgtc 3490463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 15641025 - 15641109
Alignment:
Q  31 actgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||||||||||  |||| || |||| ||| || | ||||| | |||||||||||||||||| | |||||||||| |||||    
T  15641025 actgacacgacaccgata--tatagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtc 15641109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 20157346 - 20157421
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtg 109  Q
    ||||||||||||| || ||| ||| |||| |||||| | ||||| ||| ||||||||| ||||||| |||||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtg 20157421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 25272544 - 25272469
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgt 110  Q
    |||||||||||| |||||||||| ||||||||||| | ||||| ||||||| ||| | ||||| | ||||| ||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtcaaagtgtctgtgt 25272469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 34257923 - 34257978
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtca 106  Q
    ||||||| ||||||||||| | ||||||| ||||||||| | ||||||||||||||    
T  34257923 tataattacactaaattatgtgattttattaaattattaacggtgtcgacgtgtca 34257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 38503383 - 38503300
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||| |||||||| || ||||||| |||| || ||||| ||||| ||||||||||||| ||||||  |||| |||||| |||||    
T  38503383 gacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtc 38503300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 1704987 - 1705077
Alignment:
Q  33 tgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgct 123  Q
    |||||||||||||| |||| ||||| | || |||||| | ||||| ||||||||||||  ||||||  ||||| ||||| || ||||||||    
T  1704987 tgacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgtatccgtgct 1705077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 8010278 - 8010340
Alignment:
Q  29 acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagc 91  Q
    |||| ||||| ||| ||| ||||||||||  ||| |||||||||||||| |||||||||||||    
T  8010278 acaccgacacaacatcgacacttataattatactgaattatataattttttcaaattattagc 8010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 19324608 - 19324550
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtg 109  Q
    ||||||| |||| |||||| | ||||| ||||||||| |||||||||||||| ||||||    
T  19324608 tataattacactgaattatgtgattttctcaaattatcagcagtgtcgacgtatcagtg 19324550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 23804474 - 23804436
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattatta 89  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  23804474 tataattacattaaattatataattttatcaaattatta 23804436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 44482310 - 44482240
Alignment:
Q  17 gtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattat 87  Q
    |||||| |||| |||| ||||||||||||| || ||||||| |||| |||||| | ||||| |||||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 2896142 - 2896199
Alignment:
Q  59 cactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgt 116  Q
    |||| |||||| | ||||| ||||||||||||| |||||| |||||||||||| ||||    
T  2896142 cactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgt 2896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 14359532 - 14359600
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||| ||||| ||||||||||| | ||||| ||||||||||||| |||||| |||||| ||||| |||||    
T  14359532 acttgtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtc 14359600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 17831500 - 17831604
Alignment:
Q  5 ggtgtcggacacgtgtcgc-gtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtg 103  Q
    |||||||||||| |||||  |||| |||||||||||||   || || ||| ||| |||| ||| || | ||||| ||||||||||||| |||||| ||||    
T  17831500 ggtgtcggacacatgtcggtgtccgacactgacacgac---gacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtg 17831596  T
Q  104 tcagtgtc 111  Q
    ||||||||    
T  17831597 tcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 19562656 - 19562693
Alignment:
Q  73 attttatcaaattattagcagtgtcgacgtgtcagtgt 110  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  19562656 attttctcaaattattagcagtgtcggcgtgtcagtgt 19562693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 24577182 - 24577259
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||  |||||  |||||| |||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 27471533 - 27471638
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||||||||||||||||  |||||||| || | |||||| | || | ||||| |||| |||||| |  |||| ||||||||||||| || |||  ||||    
T  27471533 ggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgt 27471632  T
Q  105 cagtgt 110  Q
    ||||||    
T  27471633 cagtgt 27471638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 31672895 - 31672968
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||| |||| ||||| |||| |||||  | ||||| ||||||||||||| ||||||  |||||||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtc 31672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 37598890 - 37598818
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||| |||||||||| |||| |||| | | ||||| ||||||||||||  |||||| ||||||||||||    
T  37598890 cgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 37598818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 14332642 - 14332694
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattag 90  Q
    ||||||||| || ||||||| ||||||||||| | ||||| ||||||||||||    
T  14332642 cgacaccgagacatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 15323225 - 15323149
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||| || || ||||| |||| ||||||||||| | ||||| ||||||||||| | || ||||| ||||||||||    
T  15323225 acacgatacagacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtc 15323149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 4987258 - 4987363
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||||||| ||||||||| |||||| |||| | |||| ||||| |||| |||||| | ||||| ||||||||||||| |||||| |||||    
T  4987258 ggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 4987357  T
Q  105 cagtgt 110  Q
    ||||||    
T  4987358 cagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 14216983 - 14216872
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    |||||| |||||||||| |||| ||||| ||||||||| || |||| ||||| |||| |||||||| || || | ||||||||||  |||||||||||||    
T  14216983 gtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtc 14216884  T
Q  106 agtgtcagtgtc 117  Q
    |||||| |||||    
T  14216883 agtgtccgtgtc 14216872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 14223112 - 14223001
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    |||||| |||||||||| |||| ||||| ||||||||| || |||| ||||| |||| |||||||| || || | ||||||||||  |||||||||||||    
T  14223112 gtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtc 14223013  T
Q  106 agtgtcagtgtc 117  Q
    |||||| |||||    
T  14223012 agtgtccgtgtc 14223001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 8039802 - 8039903
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||||||||| || ||  |||| |||| ||||||||||||| || ||||||| |||| |||||||||||||| ||||||||||||| |||| | |||||    
T  8039802 ggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgt 8039901  T
Q  105 ca 106  Q
    ||    
T  8039902 ca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 8383316 - 8383237
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||||||||| |||| |||||||| ||||| ||||||||||||| |||||| ||||||| |||| |||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 8383237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 15796261 - 15796373
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||| |||||||||| | |||| ||||  |||||||||||| | || ||||| |||| |||||||| ||||| ||||||||||| | |||||| |||||    
T  15796261 ggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgt 15796360  T
Q  105 cagtgtcagtgtc 117  Q
    || |||| |||||    
T  15796361 cattgtccgtgtc 15796373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 26492205 - 26492284
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||||||| ||||| |||| |||| ||| ||||| |||||||||||||  ||||| |||||||||||| |||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtc 26492284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 14829762 - 14829670
Alignment:
Q  24 gtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| ||||||||||||| |||| ||||| |  | |||||| | ||||| ||||||||||||| |||||| |||||||||||| |||||    
T  14829762 gtccaacaccgacacgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 17005582 - 17005671
Alignment:
Q  1 tcctggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattag 90  Q
    |||||||||| |||||||||   |||  ||||  |||| ||||||| |||||||||| |||| |||||||| ||||||||||||||||||    
T  17005582 tcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 25948883 - 25948972
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgct 123  Q
    ||||||||||| | |||||||||| |||| |||||| | ||||| ||||||||||||| || ||| | |||||||||| ||||| |||||    
T  25948883 gacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtctgtgct 25948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 9800103 - 9800027
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgt 110  Q
    ||||||||||||| ||||| |||| |||  |||||| ||||||| ||||||||||||  |||||| |||||||||||    
T  9800103 gacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgt 9800027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 23870580 - 23870644
Alignment:
Q  59 cactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgct 123  Q
    |||| |||||||| ||||| ||||||||||||| ||||||||||||| ||||| || ||||||||    
T  23870580 cactgaattatatgattttttcaaattattagcggtgtcgacgtgtccgtgtccgtatccgtgct 23870644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 11666029 - 11665950
Alignment:
Q  12 gacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagc 91  Q
    ||||||||||| ||| ||||   |||||||||||| || ||||||| ||||||||| | | |||||||||||||||||||    
T  11666029 gacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaattattagc 11665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 16789103 - 16789020
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattatta 89  Q
    |||| ||||| |||||  |||| |||||||||||||||| | |||||||||| |||| |||||||| ||||| | |||||||||    
T  16789103 gtgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 41961618 - 41961729
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    ||||||||||||||||| |||| | || ||||||||||||| |||| ||||| |||  ||| || | || || ||||||||||||  ||| || ||||||    
T  41961618 gtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtc 41961717  T
Q  106 agtgtcagtgtc 117  Q
    |||||| |||||    
T  41961718 agtgtctgtgtc 41961729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 55401134 - 55401055
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| ||||||||||| | ||||| ||||||||||||  |||||| ||| |||||||| |||||    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtc 55401055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 34185090 - 34185196
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||| ||||  |||| |||  ||||||||||||| |||| ||||| |||| |||| | | ||||| | ||||||||||| |||||| |||||    
T  34185090 ggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgt 34185189  T
Q  105 cagtgtc 111  Q
    || ||||    
T  34185190 cactgtc 34185196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 25064999 - 25064889
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||| ||||||||||| |||| ||||  |||||| ||| | ||  |||||| ||||||||||| | ||||| |||||| |||||| |||||| |||||    
T  25064999 ggtgtcagacacgtgtcgtgtccgacaccaacacgataccaacac--ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgt 25064902  T
Q  105 cagtgtcagtgtc 117  Q
    || |||| |||||    
T  25064901 caatgtctgtgtc 25064889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 28918062 - 28917981
Alignment:
Q  36 cacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||| |||| ||||| |||| |||||| | ||||| |||||||||||||  ||||| ||||||||| || |||||    
T  28918062 cacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtc 28917981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 1509599 - 1509539
Alignment:
Q  37 acgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||||||||| |||| ||||| ||||||||||| | ||||| ||||||||||||| |||||    
T  1509599 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 10268487 - 10268559
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||| || |||| ||||| ||||||||||| | ||||| ||||||||||| | |||||| ||||||||||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 10268559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 138
Target Start/End: Original strand, 10318035 - 10318134
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgctgtgtctgttgtccg 137  Q
    ||||||||| ||||||| || |||||||  || | | ||| ||||||||||||| |||||| |||||||||||| |||||||||  ||||| | ||||||    
T  10318035 cgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtgtcgtgtccggtgtccg 10318133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 11313796 - 11313860
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcg 98  Q
    ||||||||||  | || ||||||| ||||||||||| | ||||| ||||||||||||||||||||    
T  11313796 gacacgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgtcg 11313860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 14832191 - 14832091
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||||||| |||| | || |||||||||| || |||| ||||| || | | |||| | ||||| ||||||||||||| || ||| |||||    
T  14832191 ggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgt 14832092  T
Q  105 c 105  Q
    |    
T  14832091 c 14832091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 28678365 - 28678289
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||||||||| || || ||||  |||||||||| | ||||||| ||||||||||||| |||| | ||||||||||    
T  28678365 acacgacaccgacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagtgtc 28678289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 29112293 - 29112365
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgct 123  Q
    ||||||| |||| |||||||| ||||| |||||| |||||  ||||| ||||||||||||| || ||||||||    
T  29112293 tataattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgtccgtatccgtgct 29112365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 8587021 - 8587100
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| |||| |||||| | ||||| |||||||| |||  |||||| |||||||||||| |||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtc 8587100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 15544726 - 15544679
Alignment:
Q  64 aattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||| | ||||||||||||||||||| ||||| |||||||||||||    
T  15544726 aattatgtgattttatcaaattattagcggtgtcaacgtgtcagtgtc 15544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 25093561 - 25093482
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| || ||||||| |||| |||| | | ||||| |||||| |||| |||||||| ||||| ||||||||||||    
T  25093561 cgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtc 25093482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 14747625 - 14747547
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttat-caaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||||||| ||  ||| ||||| ||||||||||| | ||||| | |||||||||||| |||||| ||||||||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 22774066 - 22774152
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    |||| |||||||| |||||||||| |||| || ||| | | ||| || |||||||||  ||||||||||||| ||||| ||||||||    
T  22774066 gacatgacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgtctgtgtctgtgtccgt 22774152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 10455858 - 10455781
Alignment:
Q  29 acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtca 106  Q
    ||||| |||||||||| | || ||||||| |||| | |||||| ||||| ||| |||||||||||||| | |||||||    
T  10455858 acactaacacgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtca 10455781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 10504929 - 10504974
Alignment:
Q  64 aattatataattttatcaaattattagcagtgtcgacgtgtcagtg 109  Q
    |||||||||||||| ||||||||||| | |||| ||||||||||||    
T  10504929 aattatataattttttcaaattattatcggtgttgacgtgtcagtg 10504974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 10955011 - 10954930
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccg 119  Q
    ||||||||| |||| | ||| |||| |||||| | ||||| ||||||||||||  |||||| |||||||||||  |||||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtccg 10954930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 21479177 - 21479104
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||| |||  ||||| |||| |||| | | ||||| ||||||||||||| |||||| ||||||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 24205051 - 24205120
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||| ||||  ||||| | ||||| ||||||||||| | |||||| |||||||||||| |||||    
T  24205051 acttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtc 24205120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 27277852 - 27277897
Alignment:
Q  52 ataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||||| ||||||||||| | ||||| |||||||||||||||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 55213054 - 55212962
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcg 98  Q
    |||||||||||||||| | | || |||| ||||| ||||||| |||| ||||| ||||||||||| | ||||| | ||||||||| | ||||||    
T  55213054 ggtgtcggacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcg 55212962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 750590 - 750686
Alignment:
Q  10 cggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtca 106  Q
    ||||||||||||| |||| | || ||||||||||||| |||| ||||| ||   |||||| | || || ||||||||||||  |||||| |||||||    
T  750590 cggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtca 750686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 7928509 - 7928449
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcg 98  Q
    ||||||||| || ||||||| |||| |||||| | ||||| ||||||||||||| ||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 11493374 - 11493446
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgct 123  Q
    ||||||| |||| |||||| | ||||| ||| ||||||||  |||||||||||||| |||| ||||| |||||    
T  11493374 tataattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtcggtgct 11493446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 20503522 - 20503443
Alignment:
Q  40 acaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    ||||||| |||| ||||| |||| |||||| | ||||| |||||||||| |  |||||| |||||||||||| ||||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc-gtgtccgt 20503443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 32400730 - 32400778
Alignment:
Q  63 aaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||| |||| || ||||||||||||| |||||| ||||||||||||    
T  32400730 aaattatgtaatcttttcaaattattagctgtgtcgccgtgtcagtgtc 32400778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 40052365 - 40052310
Alignment:
Q  64 aattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    |||||| | ||||| ||||||||||||| |||||| |||||||||||| ||||||||    
T  40052365 aattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc-gtgtccgt 40052310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 49651782 - 49651846
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcg 98  Q
    ||||||||||||| |||| ||||| || | |||||| | ||||| ||||||||||||| ||||||    
T  49651782 gacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcg 49651846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 20539672 - 20539753
Alignment:
Q  36 cacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||| |||| ||||| ||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtc 20539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 36756311 - 36756423
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||||||||| |||| | || | ||||| |||||||||||| |||||||||| |||| |||||| | ||||  ||||||||||||  ||||||||||||    
T  36756311 ggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgt 36756410  T
Q  105 cagtgtcagtgtc 117  Q
    ||||||| |||||    
T  36756411 cagtgtctgtgtc 36756423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 30527591 - 30527678
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtg 121  Q
    ||||||| ||||| || ||||||| ||||||||||||| ||||| ||||||||||| |||||| |  |||||||||||||||||||||    
T  30527591 gacacgataccgacacatataattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgtcagtgtccgtg 30527678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 39323313 - 39323241
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    |||| ||||| |||| |||||| ||||||| ||||||||||||| |||||||||| |||||||| ||||||||    
T  39323313 acttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgtccgt 39323241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 44860410 - 44860320
Alignment:
Q  7 tgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||||||||| ||||| |||||||||  |||||||||||| || ||||||| |||| ||||||   ||||| ||||||||||||| |||||    
T  44860410 tgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 12668400 - 12668493
Alignment:
Q  15 acgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagt 108  Q
    ||||||||  ||||| || ||||||||||||| |||||||||| |||| |||||| | ||||| ||||||||||||   ||||| |||||||||    
T  12668400 acgtgtcgtatccaataccgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagt 12668493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 35056959 - 35056894
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatat 71  Q
    ||||||||||||||||| |||| |||| ||||||||||||| || ||||||| |||| ||||||||    
T  35056959 gtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatat 35056894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 14996219 - 14996303
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatat-aattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||| |||||||| |||| ||||| ||||||||||||| | |||| ||||||||||||| |||||| | |||||||||| |||||    
T  14996219 gacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtc 14996303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 29664057 - 29663989
Alignment:
Q  50 ttataatttcactaaattatata-attttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||| |||| ||||||||| ||||| |||||||||||||| ||||||| |||||||||| |||||    
T  29664057 ttataattacactgaattatatatattttttcaaattattagcactgtcgacatgtcagtgtctgtgtc 29663989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 4882687 - 4882766
Alignment:
Q  29 acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagt 108  Q
    |||| ||||||||| ||| |||| ||||| |||| |||||||| ||||| |||||| |||||| || |||||||||||||    
T  4882687 acaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgtcagt 4882766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 21374709 - 21374780
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccg 119  Q
    |||| ||||| |||| |||||| ||||||| ||||||||||||| |||||| ||||| |||||| |||||||    
T  21374709 acttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccg 21374780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 30717498 - 30717609
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    |||||| |||||||||| |||| |||  ||||||||| ||| |||| ||||| |||| |||||| | ||||| |||||||||||||  |||||   ||||    
T  30717498 gtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtc 30717597  T
Q  106 agtgtcagtgtc 117  Q
    |||||| |||||    
T  30717598 agtgtccgtgtc 30717609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 18420430 - 18420504
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagt 108  Q
    ||||| ||||||| |||||||||| || | |||||| | ||||| |||||||||||||||||| | |||||||||    
T  18420430 gacacaacaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagt 18420504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 21782832 - 21782890
Alignment:
Q  52 ataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgt 110  Q
    |||||| |||| |||||| | ||||| |||||||||||||||||||| |||||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 37419835 - 37419729
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||  ||| |||| |||| ||||||||||||  |||| ||||| |||| |||| | | ||||| |||||||||| ||  ||||| |||||    
T  37419835 ggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgt 37419736  T
Q  105 cagtgtc 111  Q
    |||||||    
T  37419735 cagtgtc 37419729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 37559036 - 37558954
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    ||||||||| |||| ||||| || | |||||| | |||||  |||||||||||| |||||| |||||||||||| ||||||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 37558954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 15657953 - 15657844
Alignment:
Q  8 gtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcag 107  Q
    |||||||||||||||||||| |||   |||||||||||| | || ||||| |||| |||||| | |||||  |||||||||||  | |||| ||||| ||    
T  15657953 gtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttag 15657854  T
Q  108 tgtcagtgtc 117  Q
    |||| |||||    
T  15657853 tgtccgtgtc 15657844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 27084350 - 27084236
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||| |||||||||||| |||| |||| |||| || | ||| |||||||    || | |||||||| ||||| ||||||||||||||||||||  ||||    
T  27084350 ggtgttggacacgtgtcgtgtccgacaccgacatgaaatcgacacttata----cattgaattatatgattttctcaaattattagcagtgtcggagtgt 27084255  T
Q  105 cagtgtcagtgtccgtgct 123  Q
    | ||||| || ||||||||    
T  27084254 ccgtgtccgtatccgtgct 27084236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 34691805 - 34691858
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagc 91  Q
    ||||||||| || ||||||| |||| |||||||| |||||||||||||||||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 34714217 - 34714270
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagc 91  Q
    ||||||||| || ||||||| |||| |||||||| |||||||||||||||||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 12940950 - 12941014
Alignment:
Q  53 taatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||| |||| |||||||| ||||| ||||||||||||  ||||| ||||||||||||| |||||    
T  12940950 taattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtc 12941014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 18841014 - 18841086
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||||| |||| ||||| |||| |||||| ||||||| ||||||||||||  |||||  ||||||||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtc 18841086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 42832277 - 42832357
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccg 119  Q
    |||||||| |||||||||| |||| || ||| ||||||| ||||||||||||| ||||||  ||||| | ||| |||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgtctgagtccgtgtccg 42832357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 6940310 - 6940235
Alignment:
Q  42 accgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||| |||| ||||| |||| |||||| ||| ||| | ||||||||||| |||||| |||||||||||| |||||    
T  6940310 accgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtc 6940235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 15972932 - 15972853
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| |||| |||| | ||||||| |||||||||||   |||||| |||||||||||| |||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtc 15972853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 28677967 - 28677889
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| || ||||||| |||| |||||| | ||||| ||||||||||||| |||||| |||  |||||||||||||    
T  28677967 cgacaccga-acatataattacactgaattatgtgattttttcaaattattagcggtgtcggcgttccagtgtcagtgtc 28677889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 30404850 - 30404929
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||| |||| |||| ||||| |||| |||||| | ||||| ||||||||||| | |||||| |||||||||||| |||||    
T  30404850 cgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtc 30404929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 34784950 - 34785061
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    ||||| |||| |||||| |||| | || ||||||||||||| || ||||||| ||||||||||| | ||||| | |||  |||||  ||||||  |||||    
T  34784950 gtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtc 34785049  T
Q  106 agtgtcagtgtc 117  Q
    |||||| |||||    
T  34785050 agtgtccgtgtc 34785061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 21616808 - 21616742
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||| |||| |||||| | ||||| ||||||||||||| |||||| |||||| ||||| |||||    
T  21616808 tataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtc 21616742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 22550280 - 22550318
Alignment:
Q  76 ttatcaaattattagcagtgtcgacgtgtcagtgtcagt 114  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  22550280 ttatcaaattattagcagtgtcggcgtgtccgtgtcagt 22550318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 24894452 - 24894370
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgt 116  Q
    ||||||| ||| | |||| ||||| |||| |||||| | ||||| | ||||||||||| |||||| |||||||||||| ||||    
T  24894452 gacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 27286259 - 27286365
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||||||||| |||||| |||| |||  |||| ||||  || || ||||||| |||| |||||| | || ||||||||||||||||  ||||| ||| |    
T  27286259 ggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaattatgtgatcttatcaaattattagcgttgtcggcgtat 27286358  T
Q  105 cagtgtc 111  Q
    |||||||    
T  27286359 cagtgtc 27286365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 31456638 - 31456700
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||||| || ||||||||||||| |||| ||||| |||||||| | ||||||||||| |||||    
T  31456638 acacgaaactgatacttataattacactgaattacataattttcttaaattattagcggtgtc 31456700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 16069268 - 16069333
Alignment:
Q  52 ataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||| |||| |||||||| ||||| | ||||||||| | |||||| |||||||||||| |||||    
T  16069268 ataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 23921312 - 23921239
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||| ||| |||||||| |||| |||||| ||||||| ||||||||||| | || ||||| ||||| ||||    
T  23921312 cgacaccaatatttataattacactgaattatgtaattttctcaaattattaacggtatcgacctgtcaatgtc 23921239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 26769602 - 26769497
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    ||||||||||||||||| |||| | || |||| |||||||| |||| ||||| ||| | || || | || || ||||||||||||  |||||| ||||||    
T  26769602 gtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtgtc 26769503  T
Q  106 agtgtc 111  Q
     |||||    
T  26769502 tgtgtc 26769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 28412395 - 28412330
Alignment:
Q  52 ataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||| |||| |||||| | ||||||||||||||||| | |||| ||||||| |||||| |||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtc 28412330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 31018649 - 31018576
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||| || ||||||| |||||||| || | ||||| | ||||||||||| |||| | ||||||||||||    
T  31018649 cgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtc 31018576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 11977736 - 11977704
Alignment:
Q  79 tcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||||| |||||||||||||||||||||    
T  11977736 tcaaattattatcagtgtcgacgtgtcagtgtc 11977704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 21624326 - 21624246
Alignment:
Q  38 cgacaccgatacttataatttcactaaattata-taattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| |||| ||||||  || |||| | ||||||||||| |||||| |||||||||||| |||||    
T  21624326 cgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtc 21624246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 22084796 - 22084883
Alignment:
Q  4 tggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttat--aatttcactaaattatataattttatcaaattatta 89  Q
    ||||||| ||||||||| | |||| |||||||||||| ||||  || |||  |||| |||| |||||||| ||||| |||||||||||    
T  22084796 tggtgtcagacacgtgttgtgtccgacactgacacgataccggcacatataaaattacactgaattatatgattttctcaaattatta 22084883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 23718082 - 23718006
Alignment:
Q  41 caccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||| || ||||||| |||| |||||| | | ||| ||||||||||||| ||||||  ||||||||||| |||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 23718006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 24105754 - 24105678
Alignment:
Q  41 caccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||| || ||||||| |||| |||||| | | ||| ||||||||||||| ||||||  ||||||||||| |||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 24105678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 41047892 - 41047848
Alignment:
Q  79 tcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgct 123  Q
    ||||||||||| |||||||||||||||||| || ||||| |||||    
T  41047892 tcaaattattatcagtgtcgacgtgtcagtttccgtgtcagtgct 41047848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 2572027 - 2572123
Alignment:
Q  9 tcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    |||||||||||||| |||| |||| ||||||||||||| |||| ||||| ||||||||||| | ||||| ||||||||||||  |||||||||||||    
T  2572027 tcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtc 2572123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 15816096 - 15816202
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||  ||||||| |||| ||||  |||||||||||| |||||||||| ||||||||||| | ||||| ||||||||||||  |||||| |||||    
T  15816096 ggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgt 15816195  T
Q  105 cagtgtc 111  Q
    |||||||    
T  15816196 cagtgtc 15816202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 22652068 - 22651956
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||| ||||| |||| |||| ||||||||||||| |||| |||||  | | |||||| | ||||| ||||||||||||| |||||| |||||    
T  22652068 ggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgt 22651969  T
Q  105 cagtgtcagtgtc 117  Q
    ||||||| |||||    
T  22651968 cagtgtccgtgtc 22651956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 29510271 - 29510383
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||||||||||| |||| |||| |||| ||||| ||||||| |||| |||||  ||| |||| | | ||||| ||||||||||||| |||||| |||||    
T  29510271 ggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgt 29510370  T
Q  105 cagtgtcagtgtc 117  Q
    ||||||| |||||    
T  29510371 cagtgtccgtgtc 29510383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 25172675 - 25172757
Alignment:
Q  15 acgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||| ||| |||| ||| |||||||||||||| || ||||||| || |||| ||| |||||||||||||||||||||||||||    
T  25172675 acgtatcgtgtccgacattgacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtc 25172757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 21465503 - 21465412
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||| |||||||||||| |||| |||||||||||||||| | |||| ||||| ||   |||||||| ||||| ||||||||||||| |||||    
T  21465503 gtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 5307128 - 5307048
Alignment:
Q  29 acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgt 110  Q
    |||| ||||||||||||| |||||| |||||| | |||||| | ||||| ||||||||||| ||||||||||||||| ||||    
T  5307128 acacggacacgacaccgacacttatgatttcattgaattatgtcatttt-tcaaattattatcagtgtcgacgtgtccgtgt 5307048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 13844596 - 13844669
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||| || ||||||| |||| |||||| | ||||| |||||||||||||||||||| |||||| |||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 8343408 - 8343296
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||||||| |||  ||||    ||||||| || |||| ||||| ||||||||||| | ||||| |||||||||||||  |||||  ||||    
T  8343408 ggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgt 8343309  T
Q  105 cagtgtcagtgtc 117  Q
    | |||||||||||    
T  8343308 cggtgtcagtgtc 8343296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 29447073 - 29447177
Alignment:
Q  1 tcctggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgac 100  Q
    |||||||||| ||||| ||||| |||| |||| |||| |||||||| |||| || || || | |||||| | ||||| ||||||||||||  ||||||||    
T  29447073 tcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcgac 29447172  T
Q  101 gtgtc 105  Q
    |||||    
T  29447173 gtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 11927083 - 11927146
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcg 98  Q
    |||||||||||| || ||||||| |||| |||||| | ||||||||||||||||| ||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcg 11927146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 20873128 - 20873049
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| ||||||||||| | ||||| ||||||||||| |  ||||| |||||||||||| |||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtc 20873049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 4673426 - 4673504
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||| ||||||| ||||| |||| |||| ||| ||||| ||||||||||| | |||||| |||||||||||| |||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtc 4673504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 11944727 - 11944658
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||| || ||||||| |||| | |||| | ||||||||||||||||| |||||||| |||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgt 11944658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 14134745 - 14134676
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    ||||||| |||| |||||| | ||||| |||||||||||| | |||||||||||| ||||| ||||||||    
T  14134745 tataattacactgaattatgtgattttctcaaattattagtattgtcgacgtgtccgtgtcggtgtccgt 14134676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 22197709 - 22197821
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacac-gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtg 103  Q
    |||||||||||||||||  |||| |||| ||||| ||||| || |||| ||||| ||||||||||| | | ||| ||||||||||||| |||| | ||||    
T  22197709 ggtgtcggacacgtgtcatgtccgacac-gacactgacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtg 22197807  T
Q  104 tcagtgtcagtgtc 117  Q
    | |||||| |||||    
T  22197808 ttagtgtctgtgtc 22197821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 24362168 - 24362281
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtcca-acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtg 103  Q
    |||| ||||||||||||| ||||  |||| |||||||||  || || ||||||| |||| |||||| | ||| | ||||||||||||| |||||| ||||    
T  24362168 ggtgccggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtg 24362267  T
Q  104 tcagtgtcagtgtc 117  Q
    || ||||| |||||    
T  24362268 tcggtgtctgtgtc 24362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 34897144 - 34897071
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||| ||| || ||||||| |||| |||||| | ||||| ||||||||||||| ||||||||||||| |||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtc 34897071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 39954292 - 39954353
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtca 112  Q
    ||||||| ||||||||||| | ||||| ||||||||||||| |||||| |||||| ||||||    
T  39954292 tataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtca 39954353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 20679396 - 20679468
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||||| |||||||||| |||| || ||| | ||||| ||||||||||||  |||||||| ||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtc 20679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 8343032 - 8342960
Alignment:
Q  37 acgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||||||| |||| ||||| ||||||||||| | ||||| |||||||||||||  |||||  |||||||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcg--gtgtcagtgtc 8342960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 12606830 - 12606889
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcg 98  Q
    |||||||| || ||||||| || | |||||||| ||||| ||||||||||||||||||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgtcg 12606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 24669492 - 24669413
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| |||| |||||| ||||||  ||||||||||| | |||||  |||||||||||| |||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtc 24669413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 12570472 - 12570581
Alignment:
Q  1 tcctggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgac 100  Q
    |||||||||||||||||||| | |||  |||| || || ||| ||| || ||||||| |||| |||||| |  |||| | ||||||||||||||||| ||    
T  12570472 tcctggtgtcggacacgtgtagtgtctgacaccgatac-acatcgacacatataattacacttaattatgtgtttttcttaaattattagcagtgtcaac 12570570  T
Q  101 gtgtcagtgtc 111  Q
    ||||| |||||    
T  12570571 gtgtcggtgtc 12570581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 12936515 - 12936561
Alignment:
Q  62 taaattatataattttatcaaattattagcagtgtcgacgtgtcagt 108  Q
    |||||||| | ||||||||||||||||| || |||||||||||||||    
T  12936515 taaattatgtgattttatcaaattattaacaatgtcgacgtgtcagt 12936561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 13436955 - 13437037
Alignment:
Q  29 acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||| ||||||||||||| |||| | ||| |  | |||||| | ||||| ||||||||||||| |||||| ||||||||||||    
T  13436955 acaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 13437037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 14731758 - 14731712
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    ||||||| ||||||||||| | ||||| |||||||||||||||||||    
T  14731758 tataattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 25192350 - 25192420
Alignment:
Q  41 caccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||||| ||||||||||  ||| |||||| | | ||| ||||||||||||| |||||| ||||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtc 25192420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 25566903 - 25566841
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    |||||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||| |||||    
T  25566903 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 27101555 - 27101501
Alignment:
Q  57 ttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||||||| | ||||| ||||||||||||| |||||| ||||||| ||||    
T  27101555 ttcactaaattatgtgattttttcaaattattagcggtgtcggcgtgtcaatgtc 27101501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 36450754 - 36450836
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    ||||||| | |||| ||||| |||| |||| | | ||||| ||||||||||||  |||||| |||||||||||| ||||||||    
T  36450754 cgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtccgt 36450836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 14634137 - 14634206
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtg 103  Q
    ||||||||||| | |  ||||||| |||| |||||||||||||| | ||||| ||||| |||||||||||    
T  14634137 gacacgacaccaacaaatataattacactgaattatataattttcttaaattgttagcggtgtcgacgtg 14634206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 4122244 - 4122300
Alignment:
Q  33 tgacacgacaccgatacttataatttcactaaattatataattttatcaaattatta 89  Q
    |||||| ||||||| || ||||||| || | ||||||||||||||||| ||||||||    
T  4122244 tgacacaacaccgacacatataattacaatgaattatataattttatctaattatta 4122300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 5813651 - 5813567
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgc 122  Q
    ||||||||| |||| || || ||||||| ||| | | ||| ||||||||||||| |||||| |||||| ||||| || |||||||    
T  5813651 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccgtatccgtgc 5813567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 7442918 - 7442846
Alignment:
Q  24 gtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgt 96  Q
    |||| ||||||| || ||||| | |||| ||||| |||| |||||| ||||||||| ||||||||||| ||||    
T  7442918 gtccgacactgatacaacaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgt 7442846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 18964176 - 18964136
Alignment:
Q  98 gacgtgtcagtgtcagtgtccgtgctgtgtctgttgtccgt 138  Q
    ||||||||||||||||||||||||  ||||||| |||||||    
T  18964176 gacgtgtcagtgtcagtgtccgtgtcgtgtctggtgtccgt 18964136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 22596053 - 22595981
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgt 110  Q
    ||||||| | |||| ||||| |||| |||||| | ||||| | ||||||||||| |||||| |||||||||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 29776060 - 29776016
Alignment:
Q  73 attttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||| |||||||||||||||||||||| ||||| |||| |||||    
T  29776060 attttctcaaattattagcagtgtcgacttgtcaatgtccgtgtc 29776016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 31236580 - 31236644
Alignment:
Q  41 caccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    |||||| || ||||||| || | |||||| | ||||| |||||||||||||||||||| ||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 41838144 - 41838196
Alignment:
Q  59 cactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    |||| |||||| | ||||| | ||||||||||| |||||||||||||||||||    
T  41838144 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtc 41838196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 44067565 - 44067497
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgt 116  Q
    |||||||||| ||||  ||||| | ||||| ||||||||||| | |||||| |||||||||||| ||||    
T  44067565 acttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgt 44067497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 19579780 - 19579682
Alignment:
Q  18 tgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgt 116  Q
    ||||| |||| |||||||||||||||||| |||| ||||| ||||||||||| | ||||| ||||||||||||| |||||| ||| |||||||| ||||    
T  19579780 tgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 21522842 - 21522730
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||| ||||||||||||| |||| |||| ||||||||||||| | || ||||| |||| |||||| | ||||| | ||||||||||| |||||| |||||    
T  21522842 ggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgt 21522743  T
Q  105 cagtgtcagtgtc 117  Q
    ||||||| |||||    
T  21522742 cagtgtccgtgtc 21522730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 21533408 - 21533296
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||| ||||||||||||| |||| |||| ||||||||||||| | || ||||| |||| |||||| | ||||| | ||||||||||| |||||| |||||    
T  21533408 ggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgt 21533309  T
Q  105 cagtgtcagtgtc 117  Q
    ||||||| |||||    
T  21533308 cagtgtccgtgtc 21533296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 39698633 - 39698515
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||||||| || ||||| |||| |||| |||||||||| || |||| ||||| |||| |||||| | ||||| ||||||||||||| |||||  |||||    
T  39698633 ggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgt 39698534  T
Q  105 cagtgtcagtgtccgtgct 123  Q
    ||||||| || ||||||||    
T  39698533 cagtgtccgtatccgtgct 39698515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 39205943 - 39205854
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgct 123  Q
    ||||||||||| | || ||||||| |||  |||||||| ||||| ||||||||||||||||||||||||||| ||||| || ||||||||    
T  39205943 gacacgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtccgtgtctgtatccgtgct 39205854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 43001849 - 43001777
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    |||| ||||| |||| |||||| ||||||| |||||||||||||||||||||| |||||||||| ||||||||    
T  43001849 acttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtccgt 43001777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 3966589 - 3966478
Alignment:
Q  11 ggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgt 110  Q
    |||||| ||| | |||| |||||||||||||||||| || ||||||| |||| |||| | | ||||| ||||||||||||| |||||| | |||||||||    
T  3966589 ggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgt 3966490  T
Q  111 -cagtgtccgtg 121  Q
     |||||||||||    
T  3966489 ccagtgtccgtg 3966478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 36642730 - 36642841
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    ||||||||||||||||| |||| ||||  ||| |||||||| ||||||| || ||||||| ||| | | ||| ||||||||||| | |||||| ||||||    
T  36642730 gtgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtc 36642829  T
Q  106 agtgtcagtgtc 117  Q
    |||||| |||||    
T  36642830 agtgtccgtgtc 36642841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 21542122 - 21542010
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||||||| |||| |||| ||||||||||||| |||| ||||| |||| |||||| | || || | ||||||||||  |||||| | |||    
T  21542122 ggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgt 21542023  T
Q  105 cagtgtcagtgtc 117  Q
    || |||| |||||    
T  21542022 caatgtctgtgtc 21542010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 22013461 - 22013394
Alignment:
Q  50 ttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||| ||||||||||| |||||||  |||||||||||| |||||| |||||||||||| |||||    
T  22013461 ttataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtc 22013394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 30098422 - 30098299
Alignment:
Q  1 tcctggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgac 100  Q
    |||||||||| ||||||||||| |||| |||||||| ||| ||||| |  ||||||| || | |||||| | ||||| ||||||||||| | || ||| |    
T  30098422 tcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaattatgtgattttctcaaattattaacggtttcgtc 30098323  T
Q  101 gtgtcagtgt-cagtgtccgtgct 123  Q
    |||||||||| | |||||||||||    
T  30098322 gtgtcagtgtccggtgtccgtgct 30098299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 11686024 - 11685916
Alignment:
Q  11 ggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgt 110  Q
    |||||||||||| |||| |||| || |||||||||| || ||||||| |||||||||||   | ||| ||||||||||||| |||||| | |||||||||    
T  11686024 ggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgt 11685926  T
Q  111 cagtgtccgtg 121  Q
    | |||||||||    
T  11685925 c-gtgtccgtg 11685916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 14674323 - 14674249
Alignment:
Q  43 ccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||| |||| ||||| ||||||||||| | ||||| ||||||||||||| |||||| |||||||||||| |||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 7677797 - 7677704
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcg 98  Q
    ||||||||||| ||| || |||  |||| ||||||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||| ||||||    
T  7677797 ggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcg 7677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgt 96  Q
    |||||||||||| || ||||||| ||||||||||| ||||||| ||||||||||||| ||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 41091231 - 41091316
Alignment:
Q  12 gacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    ||||| |||||||||| ||| |||||||||| ||| || ||||||| |||| |||||| | ||||| |||||| ||||||||||||    
T  41091231 gacacatgtcgcgtccgacattgacacgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 13287395 - 13287478
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||||| |||| || || |||| |||||| | ||||| ||||||||||| | |||||||||||| |||||| |||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtc 13287478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 16203795 - 16203874
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| || ||||||| |||||||||||   ||||| |||||||||||||||||||| | ||| |||||| |||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtc 16203874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 21191056 - 21191135
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||| |||||| | |||||||||| |||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtc 21191135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 27144509 - 27144442
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtcc 118  Q
    ||||||| ||||||||||| | ||||  ||||||||||||| |||||| |||||||||||| ||||||    
T  27144509 tataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtcc 27144442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 31084408 - 31084309
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtc 105  Q
    ||||||||||||||||| ||||      ||||||||| ||| |||| ||||| || | |||||| | ||||| ||||||||||||| |||||| ||||||    
T  31084408 gtgtcggacacgtgtcgtgtcc------gacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 31084315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 6035545 - 6035469
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||||||| |  ||||||| |||| |||||||| ||||  ||||||||||||| |||||| ||||||||||||    
T  6035545 gacacgacaccgacaaatataattacactgaattatattatttc-tcaaattattagcggtgtcggcgtgtcagtgtc 6035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 42488079 - 42488132
Alignment:
Q  64 aattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||||||||| ||||||| | | ||||||||||||||||||| |||||    
T  42488079 aattatataattttattaaattatcaacggtgtcgacgtgtcagtgtctgtgtc 42488132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 6247681 - 6247609
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgt 110  Q
    ||||||||| |||| ||||| |||| |||||| | ||||| ||||||||||||  |||||| |||||||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 6401589 - 6401533
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcact 62  Q
    ||||| ||||||||||| |||| |||||||||||||||||| || ||||||| ||||    
T  6401589 gtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacact 6401533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 15410415 - 15410527
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    ||||| |||||| |||||  || ||||  ||||| ||||| | || ||| ||| |||| ||| |||||||||| | ||||||||||| |||||| |||||    
T  15410415 ggtgttggacacttgtcgtatcgaacatcgacacaacaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgt 15410514  T
Q  105 cagtgtcagtgtc 117  Q
    ||||||| |||||    
T  15410515 cagtgtccgtgtc 15410527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 23221021 - 23220973
Alignment:
Q  59 cactaaattatataattttatcaaattattagcagtgtcgacgtgtcag 107  Q
    ||||||||||| | ||||||||||||||||||| |||||||| ||||||    
T  23221021 cactaaattatgtgattttatcaaattattagcggtgtcgacatgtcag 23220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 15382566 - 15382457
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttat--caaattattagcagtgtcgacgt 102  Q
    ||||||||||| |||||| |||||||||     ||||||||| |||| |||||  ||| |||||||| ||||| |  |||||||||||| |||||| |||    
T  15382566 ggtgtcggacatgtgtcgtgtccaacac-----cgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgt 15382472  T
Q  103 gtcagtgtcagtgtc 117  Q
    |||| |||| |||||    
T  15382471 gtcattgtccgtgtc 15382457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 2236776 - 2236838
Alignment:
Q  29 acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagc 91  Q
    |||| |||||||||||||| | || |||| || |||||||||||||||| | |||||||||||    
T  2236776 acacggacacgacaccgatgcataaaattacattaaattatataattttcttaaattattagc 2236838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 33178084 - 33178014
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagt 108  Q
    ||||||||| |||| ||||| ||||||||||| | ||||| | ||||||||||  |||||| |||||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 6326307 - 6326376
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||| ||||| |||| |||||| ||||||| |||||||| ||||  ||||| |||||||||||| |||||    
T  6326307 acttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtc 6326376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 19552536 - 19552622
Alignment:
Q  29 acactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||| ||||||||| ||| |||||||  | |||| |||||| | ||||| ||||||||||| | |||||| |||||||||||| |||||    
T  19552536 acaccgacacgacatcgacacttata--tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtc 19552622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 5467991 - 5468051
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||| |||| |||||| | ||||||||||||||||| | || | ||||||||||||||    
T  5467991 tataattacactgaattatgtgattttatcaaattattatcggtattgacgtgtcagtgtc 5468051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 12927700 - 12927660
Alignment:
Q  51 tataatttcactaaattatataattttatcaaattattagc 91  Q
    ||||||| ||||||||||||| ||||| |||||||||||||    
T  12927700 tataattacactaaattatatgattttctcaaattattagc 12927660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 19820396 - 19820473
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| ||||||||||  ||| ||||||   ||||| ||||||||||||| ||||||  ||||||||||| |||||    
T  19820396 cgacaccgacacttataattgtacttaattatg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtc 19820473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 23012410 - 23012462
Alignment:
Q  40 acaccgatacttataatttcactaaattatataattttatcaaattattagca 92  Q
    ||||||| || ||||||| || |||||||||| ||||| ||||||||||||||    
T  23012410 acaccgacacatataattacattaaattatatgattttctcaaattattagca 23012462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 27932279 - 27932216
Alignment:
Q  53 taatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||| |||| |||||| ||||||| ||||||||||||| |||||| |||| | |||||||||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtggc-gtgtcagtgtc 27932216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 28588674 - 28588742
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtca 106  Q
    ||||||||| || ||||||| |||| |||||| | ||||| ||||||||||| | |||||| |||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 41633804 - 41633724
Alignment:
Q  28 aacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagt 108  Q
    ||||| || |||||||||| | || ||||| |||| |||||| ||| ||| ||||||||||||| ||||||  ||||||||    
T  41633804 aacaccgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagt 41633724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 263338 - 263451
Alignment:
Q  4 tggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtg 103  Q
    |||| ||| |||||||||| |||  |||| |||||||||| || |||||||||| |||| |||||| |  |||| |||||||||||||||||| ||| ||    
T  263338 tggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatg 263437  T
Q  104 tcagtgtcagtgtc 117  Q
    |||||||| |||||    
T  263438 tcagtgtccgtgtc 263451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 8857 - 8778
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| |||| ||||| |||||||| |||| ||||| ||||||||||||| |||||| |||||||||||| |||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 8778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 53272 - 53170
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||||||||  |||| |||| |||||| |||||| |||||||||| |||| |||||| | ||||| |||||||||| || || ||| |||||    
T  53272 ggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgt 53173  T
Q  105 cag 107  Q
    |||    
T  53172 cag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 44493 - 44584
Alignment:
Q  6 gtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    ||||||||||||||| | ||||||||| ||||||| ||||| || ||||||| |||| |||||| | ||||| ||||||| ||||| |||||    
T  44493 gtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 92856 - 92781
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgtgct 123  Q
    |||| ||||| |||| |||||| ||||||| ||||||||||||| |||||| |||||||||||| || ||||||||    
T  92856 acttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgtatccgtgct 92781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 7032 - 7105
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||| | |||| |||||  |||||||||| ||||||| ||||||||||||| |||||||||| ||||||||    
T  7032 cgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtc 7105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 51860 - 51788
Alignment:
Q  48 acttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtccgt 120  Q
    |||| ||||| |||| |||||| | ||||| ||||||||||||| |||||| |||||||||||| ||||||||    
T  51860 acttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 51788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 20235 - 20152
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||| || |||| ||||| |||| |||||| | ||||| ||||||||||||| |||||| ||||||| |||| |||||    
T  20235 gacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtc 20152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 1703 - 1629
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtca 112  Q
    ||||||||| ||||||||||  || ||||||||| ||||| ||||||||||| | |||||| |||||| ||||||    
T  1703 cgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtctgtgtca 1629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 8754 - 8652
Alignment:
Q  9 tcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagt 108  Q
    |||||||||| || ||||  |||  ||||||||||||| ||||||||||  ||| || ||| | |||||   |||||||||| |||||||||||||||||    
T  8754 tcggacacgtatcacgtctgacatagacacgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagt 8655  T
Q  109 gtc 111  Q
    |||    
T  8654 gtc 8652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 70337 - 70259
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgt 116  Q
    ||||||||| |||||||||| |||| |||||| | ||||| ||||||||||| | |||||||| |||| ||||| ||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtctgtgtctgtgt 70259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 1108 - 1015
Alignment:
Q  24 gtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||| ||||| |||| || || |||| || |||| |||||| ||||||| ||||||||||||| ||||||  ||||||| ||| |||||    
T  1108 gtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtc 1015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 462 - 535
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtc 111  Q
    ||||||||| |||| ||||| |||| |||| | | ||||| |||||||||||||||||||| ||| ||||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtc 535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 6401 - 6312
Alignment:
Q  8 gtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtc 97  Q
    ||||||| ||||||| | || |||| || |||||||||| || ||||||| || | ||||||  |||||| |||||||||||||||||||    
T  6401 gtcggacccgtgtcgtgccccacaccgatacgacaccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtc 6312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 25765 - 25834
Alignment:
Q  35 acacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgt 104  Q
    |||||||||||| |||||||||| ||||||||||| | ||||| || |||||||| | ||||| ||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgattttctctaattattaaccgtgtcaacgtgt 25834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 71817 - 71709
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattatataattttat--caaattattagcagtgtcgacgt 102  Q
    |||||||||||||||| | |||| |||| |||||||||| || |||  ||||| |||| |||| | | ||||| |  |||||||||||| |||||| |||    
T  71817 ggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgt 71718  T
Q  103 gtcagtgtc 111  Q
    |||||||||    
T  71717 gtcagtgtc 71709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 135308 - 135372
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcg 98  Q
    ||||||||||||| || ||||||| |||  |||||| | ||||| ||||||||||||||||||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcg 135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 13459 - 13380
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||  ||| ||||| |||| |||||| | ||||| ||||||||||||  |||||| |||||||||||| |||||    
T  13459 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 23483 - 23400
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    ||||||||||||| |||||||||| |||| |||||| | ||||| |  | |||||| | |||||| |||||||||||| |||||    
T  23483 gacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtc 23400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 21868 - 21947
Alignment:
Q  38 cgacaccgatacttataatttcactaaattatataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||||||||  ||| ||||| |||| |||||| | ||||| ||||||||||||  |||||| |||||||||||| |||||    
T  21868 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 63831 - 63752
Alignment:
Q  39 gacaccgatacttataatttcactaaattatataattttatcaaattattagcagtg-tcgacgtgtcagtgtcagtgtc 117  Q
    |||||||| |||| ||||| |||| |||||| ||||||| ||||||||||||| ||| | ||||||||| |||| |||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgttagacgtgtcattgtccgtgtc 63752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 3020 - 2956
Alignment:
Q  5 ggtgtcggacacgtgtcgcgtccaacactgacacgacaccgatacttataatttcactaaattat 69  Q
    ||||||| |||||||||| |||  | || |||||||||| ||||||| ||||| |||||||||||    
T  3020 ggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaattat 2956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 178814 - 178898
Alignment:
Q  34 gacacgacaccgatacttataatttcactaaattat-ataattttatcaaattattagcagtgtcgacgtgtcagtgtcagtgtc 117  Q
    |||| ||||| || |||| ||||| |||| |||||| || ||||| ||||||||||||  |||||| |||||||||||| |||||    
T  178814 gacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 178898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 5099 times since January 2019
Visitors: 5754