View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0800_low_6 (Length: 450)

Name: NF0800_low_6
Description: NF0800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0800_low_6
NF0800_low_6
[»] chr1 (33 HSPs)
chr1 (79-448)||(51263125-51263490)
chr1 (332-419)||(11241551-11241638)
chr1 (322-411)||(44665378-44665467)
chr1 (332-396)||(52353860-52353924)
chr1 (332-389)||(11120548-11120604)
chr1 (322-399)||(23333745-23333822)
chr1 (322-388)||(13984034-13984100)
chr1 (322-388)||(32851821-32851887)
chr1 (322-388)||(42831641-42831707)
chr1 (322-388)||(43822772-43822838)
chr1 (332-388)||(36297979-36298035)
chr1 (340-388)||(38902003-38902051)
chr1 (335-386)||(47783728-47783779)
chr1 (322-388)||(11569979-11570045)
chr1 (333-389)||(9505556-9505612)
chr1 (332-388)||(36166888-36166944)
chr1 (334-389)||(40287061-40287114)
chr1 (332-387)||(38601034-38601088)
chr1 (322-388)||(11566941-11567007)
chr1 (322-388)||(25813733-25813798)
chr1 (192-294)||(38902064-38902166)
chr1 (334-396)||(51061695-51061757)
chr1 (333-389)||(31133165-31133221)
chr1 (322-388)||(27544368-27544434)
chr1 (322-387)||(32451819-32451885)
chr1 (326-388)||(33041440-33041502)
chr1 (335-388)||(641831-641883)
chr1 (333-370)||(3623121-3623158)
chr1 (335-388)||(40634393-40634446)
chr1 (332-377)||(43506265-43506310)
chr1 (341-388)||(24555864-24555912)
chr1 (322-389)||(38118929-38118997)
chr1 (245-289)||(42831751-42831795)
[»] chr3 (15 HSPs)
chr3 (332-412)||(36902395-36902475)
chr3 (335-388)||(46006152-46006205)
chr3 (322-389)||(41211979-41212045)
chr3 (322-388)||(52995714-52995780)
chr3 (322-411)||(26085040-26085129)
chr3 (337-388)||(55272804-55272855)
chr3 (322-388)||(30595143-30595209)
chr3 (332-389)||(19900203-19900260)
chr3 (326-392)||(47075613-47075679)
chr3 (332-389)||(33832012-33832069)
chr3 (322-399)||(3973458-3973534)
chr3 (322-399)||(3996343-3996419)
chr3 (322-399)||(3993557-3993633)
chr3 (322-399)||(4009869-4009945)
chr3 (332-388)||(36277834-36277893)
[»] chr8 (48 HSPs)
chr8 (322-388)||(9134147-9134213)
chr8 (332-388)||(18806640-18806696)
chr8 (322-388)||(5139737-5139803)
chr8 (333-387)||(6427175-6427229)
chr8 (322-388)||(6519104-6519170)
chr8 (333-389)||(23982239-23982295)
chr8 (322-388)||(2603134-2603200)
chr8 (322-388)||(11777729-11777795)
chr8 (322-388)||(28567803-28567869)
chr8 (322-388)||(28575396-28575462)
chr8 (322-388)||(31226531-31226597)
chr8 (322-388)||(35468329-35468395)
chr8 (336-388)||(5535869-5535921)
chr8 (332-388)||(9604574-9604630)
chr8 (334-389)||(5569223-5569278)
chr8 (322-377)||(5978578-5978633)
chr8 (322-389)||(12734038-12734104)
chr8 (333-388)||(16531642-16531697)
chr8 (322-385)||(31128618-31128681)
chr8 (326-388)||(28540667-28540729)
chr8 (332-397)||(37673833-37673898)
chr8 (322-378)||(7288228-7288284)
chr8 (332-388)||(10954144-10954200)
chr8 (332-388)||(10962149-10962205)
chr8 (336-392)||(13629113-13629169)
chr8 (336-392)||(13729525-13729581)
chr8 (333-389)||(35973459-35973515)
chr8 (335-389)||(3628224-3628278)
chr8 (322-388)||(9133799-9133864)
chr8 (322-388)||(14426182-14426248)
chr8 (322-388)||(28562305-28562371)
chr8 (329-386)||(1737797-1737854)
chr8 (322-386)||(4797295-4797360)
chr8 (332-389)||(8673671-8673728)
chr8 (336-389)||(38937787-38937840)
chr8 (332-388)||(23036790-23036846)
chr8 (256-300)||(31128542-31128586)
chr8 (345-389)||(40453083-40453127)
chr8 (218-289)||(13079888-13079959)
chr8 (322-369)||(30714111-30714158)
chr8 (322-369)||(30721888-30721935)
chr8 (194-300)||(9135096-9135201)
chr8 (332-374)||(23812644-23812686)
chr8 (326-388)||(28557242-28557304)
chr8 (322-388)||(1155198-1155268)
chr8 (192-241)||(4326066-4326115)
chr8 (337-390)||(36316756-36316808)
chr8 (256-300)||(1155122-1155166)
[»] chr4 (34 HSPs)
chr4 (335-411)||(16461108-16461184)
chr4 (322-389)||(30865886-30865953)
chr4 (322-385)||(35309047-35309110)
chr4 (322-389)||(39055157-39055224)
chr4 (322-388)||(35382425-35382491)
chr4 (332-388)||(35332055-35332111)
chr4 (332-388)||(43968777-43968833)
chr4 (335-399)||(53779428-53779492)
chr4 (322-388)||(49211023-49211089)
chr4 (336-411)||(10180689-10180764)
chr4 (322-388)||(822441-822507)
chr4 (333-395)||(24030614-24030676)
chr4 (322-407)||(23359079-23359164)
chr4 (322-378)||(22628474-22628530)
chr4 (332-411)||(2574121-2574200)
chr4 (333-388)||(8824960-8825014)
chr4 (322-388)||(11346976-11347042)
chr4 (322-380)||(12447422-12447480)
chr4 (322-388)||(39629255-39629321)
chr4 (322-388)||(52199799-52199865)
chr4 (332-389)||(2322503-2322560)
chr4 (332-389)||(2396293-2396350)
chr4 (336-388)||(41916063-41916115)
chr4 (322-394)||(54018511-54018583)
chr4 (332-388)||(44500489-44500545)
chr4 (256-300)||(52199897-52199941)
chr4 (322-381)||(26699009-26699068)
chr4 (335-389)||(28509468-28509522)
chr4 (323-388)||(31262477-31262545)
chr4 (343-397)||(53847302-53847355)
chr4 (335-388)||(45832565-45832617)
chr4 (191-227)||(2066115-2066151)
chr4 (348-388)||(5036047-5036087)
chr4 (332-388)||(23607349-23607405)
[»] chr7 (37 HSPs)
chr7 (322-388)||(36901099-36901165)
chr7 (322-388)||(43302180-43302246)
chr7 (322-389)||(46282192-46282259)
chr7 (335-417)||(19594016-19594098)
chr7 (322-388)||(23156302-23156368)
chr7 (322-388)||(36482068-36482134)
chr7 (322-388)||(44441349-44441415)
chr7 (322-389)||(48767219-48767286)
chr7 (335-389)||(4874941-4874995)
chr7 (333-395)||(36039044-36039106)
chr7 (322-388)||(36657950-36658016)
chr7 (322-384)||(39853769-39853831)
chr7 (322-411)||(31330367-31330456)
chr7 (322-410)||(4958212-4958300)
chr7 (322-425)||(38223933-38224037)
chr7 (322-388)||(37698484-37698550)
chr7 (335-395)||(2008578-2008638)
chr7 (333-389)||(15018374-15018430)
chr7 (341-417)||(19753042-19753118)
chr7 (332-411)||(25324573-25324651)
chr7 (334-385)||(29914477-29914528)
chr7 (322-389)||(36656670-36656737)
chr7 (322-389)||(47841484-47841551)
chr7 (349-391)||(2888137-2888179)
chr7 (322-388)||(5513909-5513975)
chr7 (322-388)||(44441587-44441653)
chr7 (332-389)||(6068092-6068149)
chr7 (333-389)||(13057864-13057921)
chr7 (332-389)||(43095504-43095561)
chr7 (347-387)||(3373275-3373315)
chr7 (349-389)||(21122071-21122111)
chr7 (332-391)||(31027263-31027322)
chr7 (322-369)||(41172572-41172619)
chr7 (335-389)||(27334367-27334421)
chr7 (343-389)||(32724226-32724272)
chr7 (334-388)||(46748101-46748155)
chr7 (190-235)||(32724394-32724439)
[»] chr5 (26 HSPs)
chr5 (322-388)||(2375544-2375610)
chr5 (322-388)||(13420770-13420836)
chr5 (331-388)||(1309833-1309890)
chr5 (332-388)||(13486580-13486636)
chr5 (335-389)||(14642291-14642344)
chr5 (332-389)||(6761440-6761497)
chr5 (322-390)||(42951794-42951862)
chr5 (322-388)||(12593121-12593188)
chr5 (333-390)||(20420163-20420220)
chr5 (332-388)||(7293042-7293098)
chr5 (342-389)||(22579668-22579715)
chr5 (322-388)||(18396580-18396646)
chr5 (322-388)||(26675541-26675607)
chr5 (322-388)||(26947149-26947215)
chr5 (335-389)||(34382547-34382601)
chr5 (336-386)||(35463304-35463354)
chr5 (341-390)||(35982138-35982187)
chr5 (332-388)||(15468194-15468250)
chr5 (322-389)||(3558767-3558834)
chr5 (337-388)||(11200732-11200783)
chr5 (335-381)||(1666847-1666893)
chr5 (335-377)||(29558344-29558386)
chr5 (210-283)||(26675419-26675492)
chr5 (210-283)||(26947027-26947100)
chr5 (327-388)||(28998064-28998125)
chr5 (322-411)||(41520924-41521013)
[»] chr6 (11 HSPs)
chr6 (332-388)||(32658497-32658553)
chr6 (333-387)||(25099074-25099128)
chr6 (322-411)||(387697-387787)
chr6 (322-388)||(5002432-5002498)
chr6 (341-389)||(9491836-9491884)
chr6 (332-388)||(21941003-21941059)
chr6 (332-388)||(22281839-22281895)
chr6 (332-411)||(7693995-7694074)
chr6 (333-388)||(6988172-6988227)
chr6 (322-388)||(32977434-32977500)
chr6 (333-389)||(18804249-18804305)
[»] chr2 (28 HSPs)
chr2 (322-389)||(6459074-6459141)
chr2 (332-388)||(5038707-5038763)
chr2 (322-389)||(34234879-34234946)
chr2 (322-388)||(44887302-44887368)
chr2 (332-388)||(32887674-32887730)
chr2 (336-392)||(34820955-34821011)
chr2 (333-388)||(11921940-11921995)
chr2 (322-389)||(13022786-13022853)
chr2 (332-387)||(40999675-40999730)
chr2 (322-388)||(36887631-36887697)
chr2 (332-385)||(26312470-26312523)
chr2 (192-300)||(15269291-15269399)
chr2 (336-388)||(45135758-45135810)
chr2 (335-378)||(6710946-6710989)
chr2 (336-379)||(41068866-41068909)
chr2 (192-302)||(11922036-11922146)
chr2 (335-392)||(37648364-37648422)
chr2 (336-389)||(16117988-16118041)
chr2 (335-387)||(26297112-26297164)
chr2 (322-389)||(65455-65522)
chr2 (322-389)||(34375045-34375111)
chr2 (339-389)||(6562937-6562986)
chr2 (256-302)||(26312563-26312609)
chr2 (332-385)||(3668837-3668890)
chr2 (324-389)||(3949044-3949109)
chr2 (336-389)||(16341932-16341985)
chr2 (332-388)||(9583138-9583194)
chr2 (333-389)||(44583437-44583493)
[»] scaffold0991 (1 HSPs)
scaffold0991 (328-389)||(2951-3012)
[»] scaffold0712 (1 HSPs)
scaffold0712 (333-389)||(6133-6189)
[»] scaffold0709 (1 HSPs)
scaffold0709 (333-389)||(6151-6207)
[»] scaffold0017 (1 HSPs)
scaffold0017 (335-388)||(31877-31929)


Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-118; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 79 - 448
Target Start/End: Complemental strand, 51263490 - 51263125
Alignment:
Q  79 ctatttttcaagtttatagactccctctcggcctctccctctaatcaatgttacaaacaaaacaaaatactattttttcaagtttaaagattaaatgatg 178  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  51263490 ctatttttcaagtttatagactccctctc--------cctctaatcaatgttacaaacaaaacaaaatactattttttcaagtttatagactaaatgatg 51263399  T
Q  179 taaaataagacaataagagcatccacaaagaagacacatatttttggatacttaaatgagtcttatatgtgcatgttactcatttataaattttcaatag 278  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||      ||| ||||||||||||||||||||||||||||||||||||||||     
T  51263398 taaaataagacaataagagcatctacaaagaagacacatatttttggat------atgggtcttatatgtgcatgttactcatttataaattttcaataa 51263305  T
Q  279 tagtacctaatgagca---------ttcaattcagcatctcaaannnnnnnnaaatgagacacactaatcaactatcaataactttatgtcattatattt 369  Q
    ||||||||||||||||         ||||||||||||||||| |        |||||| |||||||||||||||||||||||||||||||||||||||||    
T  51263304 tagtacctaatgagcactcaatcatttcaattcagcatctcacaaatttcttaaatgaaacacactaatcaactatcaataactttatgtcattatattt 51263205  T
Q  370 taattttttaatattaaaaatgtatggatctctcttaagatttagagt-ttaagtgaaattgcgtatcttataagacccc 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| || |||| |||||| |||||    
T  51263204 taattttttaatattaaaaatgtatggatctctcttaagatttagagtcttaagtaaaactgtgtattttataaaacccc 51263125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 419
Target Start/End: Original strand, 11241551 - 11241638
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatttagagttt 419  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| || |||||| | ||||||| | |||||||    
T  11241551 cactaatcaactatcaataactttatatcattatatttcaattttataatattaaaaaagtgtggatcccacttaagaatgagagttt 11241638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 411
Target Start/End: Original strand, 44665378 - 44665467
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatt 411  Q
    |||||| | ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||  |||||  |||| |||||||||    
T  44665378 aaatgaaatacactaatcaactatcaataattttatatcattatatttcaattttttaatattaaaagagtatgagtctcgcttaagatt 44665467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 52353860 - 52353924
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatgg 396  Q
    |||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||| ||||||    
T  52353860 cactaatcaactatcaataactttatatcattacatttcaattttttaatattaaaaaagtatgg 52353924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 11120604 - 11120548
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  11120604 cactaatcaactatcaataactttatatcattatattttaat-ttttaatattaaaaa 11120548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 399
Target Start/End: Complemental strand, 23333822 - 23333745
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatc 399  Q
    ||||||||| |||| ||||| ||||||||||||||| | ||||||||| ||||||||||||||||||| ||| |||||    
T  23333822 aaatgagactcactgatcaaatatcaataactttatattattatatttcaattttttaatattaaaaaagtacggatc 23333745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 13984100 - 13984034
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||  ||||||||||||||||||||||||| ||| || |||| ||||||||||||||||||    
T  13984100 aaatgagacctactaatcaactatcaataactttatatcactacatttcaattttttaatattaaaa 13984034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 32851821 - 32851887
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| |||||||||||||||||||||||| ||||| ||| || |||| ||||||||||||||||||    
T  32851821 aaatgggacacactaatcaactatcaataattttatatcactacatttcaattttttaatattaaaa 32851887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 42831707 - 42831641
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||  || ||||||||||||||||| ||||| |||||| |||||||||||||||||||||||    
T  42831707 aaatgagatccattaatcaactatcaataattttatatcattacattttaattttttaatattaaaa 42831641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 43822838 - 43822772
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| |||||||||||||||||||||||||| ||| || |||| ||||||||||||||||||    
T  43822838 aaatgggacccactaatcaactatcaataactttatatcactacatttcaattttttaatattaaaa 43822772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 36298035 - 36297979
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||    
T  36298035 cactaatcaactatcaataattttatatcattacatttcaattttttaatattaaaa 36297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 38902051 - 38902003
Alignment:
Q  340 aactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  38902051 aactattaataactttatatcattatattttaattttttaatattaaaa 38902003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 386
Target Start/End: Original strand, 47783728 - 47783779
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaa 386  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  47783728 taatcaactatcaataattttatatcattatatttcaattttttaatattaa 47783779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 11569979 - 11570045
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||  | ||||||||||||||||||||||| |||||| |||| ||||||||||||| ||||    
T  11569979 aaatgagacttattaatcaactatcaataactttatatcattacatttcaattttttaatataaaaa 11570045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 9505556 - 9505612
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||||||||||||| | |||| || | |||||||||||||||||||    
T  9505556 actaatcaactatcaataactttatattattacatataaattttttaatattaaaaa 9505612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 36166944 - 36166888
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||| |||||||||||||||||| ||| || ||||||||||||| |||||||||    
T  36166944 cactaataaactatcaataactttatatcactacattttaattttttcatattaaaa 36166888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 40287061 - 40287114
Alignment:
Q  334 ctaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||||||||||| |||||  ||||| ||||||||||||||||||||||||    
T  40287061 ctaatcaactatcaataattttat--cattacattttaattttttaatattaaaaa 40287114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 387
Target Start/End: Original strand, 38601034 - 38601088
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaa 387  Q
    |||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||    
T  38601034 cactaatcaattatcaataactttatatcattacattttaa-tttttaatattaaa 38601088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 11566941 - 11567007
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||  | ||||||||||||||||||||||| |||||| |||| | ||||||||||| ||||    
T  11566941 aaatgagacttattaatcaactatcaataactttatatcattacatttcatttttttaatataaaaa 11567007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 25813798 - 25813733
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| |||||||||||||||||||| ||||| ||| || | ||||| |||||||||||||||    
T  25813798 aaatgagacccactaatcaactatcaataattttatatcactaca-tttaaatttttaatattaaaa 25813733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 38902166 - 38902064
Alignment:
Q  192 taagagcatccacaaagaagacacatatttttggatacttaaatgagtcttatatgtgcatgttactcatttataaattttcaatagtagtacctaatga 291  Q
    |||||||| |||||| | ||||||  |||||||| | |||||||| |||| |  ||| ||| | |||||||||||| |||| |||||||||||||||| |    
T  38902166 taagagcacccacaatggagacactcatttttgggttcttaaatgggtctcacgtgtacatatcactcatttataattttttaatagtagtacctaataa 38902067  T
Q  292 gca 294  Q
    |||    
T  38902066 gca 38902064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 51061695 - 51061757
Alignment:
Q  334 ctaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatgg 396  Q
    |||||| ||||||||||||||| | |||||| |||| ||||||||||| ||||||| ||||||    
T  51061695 ctaatctactatcaataactttctatcattacatttcaattttttaattttaaaaaagtatgg 51061757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 31133165 - 31133221
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||||||| || || |||||| |||| |||| ||||||||||||||    
T  31133165 actaatcaactatcaataatttcatatcattacatttaaattatttaatattaaaaa 31133221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 27544434 - 27544368
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| || ||| ||| ||||| |||||||| ||||||| |||| || |||||||||||||||    
T  27544434 aaatgagacccattaaacaattatcactaactttaagtcattacatttcaactttttaatattaaaa 27544368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 387
Target Start/End: Original strand, 32451819 - 32451885
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatatttta-attttttaatattaaa 387  Q
    ||||||||| ||||||| || ||||||||||||||| ||||| ||||| |  |||||||||||||||    
T  32451819 aaatgagacccactaataaattatcaataactttatatcattgtatttcattttttttaatattaaa 32451885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 33041502 - 33041440
Alignment:
Q  326 gagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||||||| |||||||||||| ||||| |||||| || | ||| ||||||||||||||    
T  33041502 gagactcactaattaactatcaataattttatatcattacatatcaatattttaatattaaaa 33041440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 388
Target Start/End: Original strand, 641831 - 641883
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||||||||||||||||| |||||| || | || |||||||||||||||    
T  641831 taatcaactatcaataactttatatcattacatatcaa-tttttaatattaaaa 641883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 370
Target Start/End: Original strand, 3623121 - 3623158
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatatttt 370  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  3623121 actaatcaactatcaataactttagatcattatatttt 3623158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 388
Target Start/End: Original strand, 40634393 - 40634446
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||| |||||||||||||||| |||||  |||||||| || |||||||||||    
T  40634393 taatcatctatcaataactttatatcattgcattttaatattctaatattaaaa 40634446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 43506310 - 43506265
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttt 377  Q
    |||||||||||||||||||||||||| | |||| |||| |||||||    
T  43506310 cactaatcaactatcaataactttatattattacatttcaattttt 43506265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 388
Target Start/End: Original strand, 24555864 - 24555912
Alignment:
Q  341 actatcaataactttatgtcattatattttaa-ttttttaatattaaaa 388  Q
    ||||||||||| ||||| ||||||||||| || ||||||||||||||||    
T  24555864 actatcaataattttatatcattatatttcaatttttttaatattaaaa 24555912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 38118929 - 38118997
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatatttta-attttttaatattaaaaa 389  Q
    ||||||||| || ||||||||||||||||| ||||| | |||| |||| |  |||||||||||||||||    
T  38118929 aaatgagactcattaatcaactatcaataattttatattattacatttcaggttttttaatattaaaaa 38118997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 42831795 - 42831751
Alignment:
Q  245 atgtgcatgttactcatttataaattttcaatagtagtacctaat 289  Q
    |||| ||| |||||||||||||| |||| ||||||||||||||||    
T  42831795 atgtacatattactcatttataattttttaatagtagtacctaat 42831751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 332 - 412
Target Start/End: Original strand, 36902395 - 36902475
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagattt 412  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  || |||||||| ||||| ||||    
T  36902395 cactaatcaactatcaataactttatatcattatattttaattttttaatattaaaacggtttggatctcacttaaaattt 36902475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 388
Target Start/End: Original strand, 46006152 - 46006205
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46006152 taatcaactatcaataactttatatcattatattttaattttttaatattaaaa 46006205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 41212045 - 41211979
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  41212045 aaatgagacatactaatcaactatcaataactttatatcattacattttaat-ttttaatattaaaaa 41211979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 52995714 - 52995780
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||||    
T  52995714 aaatgagacatactaatcaactatcaataactttatatcattatctttaatttttttaatattaaaa 52995780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 26085129 - 26085040
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatt 411  Q
    ||||| |||||||| |||||| ||||||||||||||  |||||||||| |||||||||||||||||||  | |||||| | |||||||||    
T  26085129 aaatgggacacacttatcaaccatcaataactttataccattatatttcaattttttaatattaaaaaaatgtggatcccacttaagatt 26085040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 337 - 388
Target Start/End: Complemental strand, 55272855 - 55272804
Alignment:
Q  337 atcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  55272855 atcaactatcaataactttatatcattatatttcaattttttaatattaaaa 55272804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 30595143 - 30595209
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| |||||||||||||||||||| ||||| |||||| |||| |||||||||||| |||||    
T  30595143 aaatgagactcactaatcaactatcaataattttatatcattacatttaaattttttaatactaaaa 30595209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 19900203 - 19900260
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||    
T  19900203 cactaatcaactataaataattttatatcattacattttaattttttaatattaaaaa 19900260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 47075613 - 47075679
Alignment:
Q  326 gagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgt 392  Q
    ||||| ||||||||||||||| |||| ||||| |||||| || | ||||||||||||||||||||||    
T  47075613 gagactcactaatcaactatctataattttatatcattacatatcaattttttaatattaaaaatgt 47075679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 33832012 - 33832069
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||||||||||||| || || |||||| | ||||||||||||||||||||||    
T  33832012 cactaatcaactatcaataatttcatatcattacaatttaattttttaatattaaaaa 33832069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 399
Target Start/End: Original strand, 3973458 - 3973534
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatc 399  Q
    ||||||||| |  |||||||| |||||||| ||||| |||||| ||||||| ||||||||||||||||  ||||||||    
T  3973458 aaatgagactcgttaatcaaccatcaataaatttatatcattacattttaa-tttttaatattaaaaaaatatggatc 3973534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 399
Target Start/End: Complemental strand, 3996419 - 3996343
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatc 399  Q
    ||||||||| |  |||||||| |||||||| ||||| |||||| |||||||| |||||||||||||||  ||||||||    
T  3996419 aaatgagactcgttaatcaaccatcaataaatttatatcattacattttaat-ttttaatattaaaaaaatatggatc 3996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 399
Target Start/End: Complemental strand, 3993633 - 3993557
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatc 399  Q
    ||||||||| |  |||||||| |||||||| ||||| |||||| |||| ||||||| |||||||||||  ||||||||    
T  3993633 aaatgagactcgttaatcaaccatcaataaatttatatcattacatttcaattttt-aatattaaaaaaatatggatc 3993557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 399
Target Start/End: Complemental strand, 4009945 - 4009869
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatc 399  Q
    ||||||||| |  |||||||| |||||||| ||||| |||||| |||| ||||||| |||||||||||  ||||||||    
T  4009945 aaatgagactcgttaatcaaccatcaataaatttatatcattacatttaaattttt-aatattaaaaaaatatggatc 4009869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 36277834 - 36277893
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattat---attttaattttttaatattaaaa 388  Q
    ||||||| || ||||||||||||||| |||||||   |||| ||||||||||||||||||    
T  36277834 cactaataaaatatcaataactttatatcattattacatttcaattttttaatattaaaa 36277893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 9134213 - 9134147
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  9134213 aaatgagactcactaatcaactatcaataactttatatcattatatttcaattttttaatattaaaa 9134147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 18806640 - 18806696
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  18806640 cactaatcaactatcaataactttatatcattatatttcaattttttaatattaaaa 18806696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 5139737 - 5139803
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||| || |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  5139737 aaatgaaactcactaatcaactatcaataattttatatcattatattttcattttttaatattaaaa 5139803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 6427175 - 6427229
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaa 387  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  6427175 actaatcaactatcaataattttatatcattatattttaattttttaatattaaa 6427229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 6519104 - 6519170
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| |||||||||||||||||||||||||| |||||| |||| |||||||||||| |||||    
T  6519104 aaatgagactcactaatcaactatcaataactttatatcattacatttcaattttttaatactaaaa 6519170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 23982295 - 23982239
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  23982295 actaaccaactatcaataactttatatcattatatttcaattttttaatattaaaaa 23982239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 2603134 - 2603200
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||  |||||||||||||||||||||||||| ||| || |||| ||||||||||||||||||    
T  2603134 aaatgagatccactaatcaactatcaataactttatatcactacatttcaattttttaatattaaaa 2603200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 11777729 - 11777795
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||  ||||||||||||||||||||||||| |||||| |||| || |||||||||||||||    
T  11777729 aaatgagacctactaatcaactatcaataactttatatcattacatttcaactttttaatattaaaa 11777795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 28567869 - 28567803
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||| |||  ||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  28567869 aaatgagccacgataagcaactatcaataactttatatcattatatttcaattttttaatattaaaa 28567803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 28575462 - 28575396
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||| |||  ||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  28575462 aaatgagccacgataagcaactatcaataactttatatcattatatttcaattttttaatattaaaa 28575396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 31226531 - 31226597
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| ||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  31226531 aaatgggacccactactcaactatcaataattttatatcattatatttcaattttttaatattaaaa 31226597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 35468395 - 35468329
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| ||||||| ||||||||||||||||||| || || |||| ||||||||||||||||||    
T  35468395 aaatgagactcactaattaactatcaataactttatgccactacatttgaattttttaatattaaaa 35468329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 5535869 - 5535921
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  5535869 aatcaactttcaataactttatatcattatatttcaattttttaatattaaaa 5535921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 9604574 - 9604630
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||| |||||||    
T  9604574 cactaatcaactatcaataactttatatcattagatttcaattttttaacattaaaa 9604630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 5569278 - 5569223
Alignment:
Q  334 ctaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||    
T  5569278 ctaatcaactatcaataacattatatcattacatttgaattttttaatattaaaaa 5569223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 377
Target Start/End: Original strand, 5978578 - 5978633
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttt 377  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  5978578 aaatgggacccactaatcaactatcaataactttatatcattatatttcaattttt 5978633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 12734104 - 12734038
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||| |||||||||||||||   |||||||| |||||| ||||||||||||||||||||||||    
T  12734104 aaatgagac-cactaatcaactatcctcaactttatatcattacattttaattttttaatattaaaaa 12734038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 388
Target Start/End: Original strand, 16531642 - 16531697
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||  |||||||||| ||||||||||| ||||||||||||||||||    
T  16531642 actaatcaactattcataactttatatcattatatttcaattttttaatattaaaa 16531697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 31128618 - 31128681
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatatta 385  Q
    |||||||||  |||||| |||||||||||||||||| ||||||||||| ||||| |||||||||    
T  31128618 aaatgagacctactaataaactatcaataactttatatcattatatttcaatttgttaatatta 31128681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 28540729 - 28540667
Alignment:
Q  326 gagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| |||||||||||||||||||  ||||| |||||| |||| ||||||||||||||||||    
T  28540729 gagactcactaatcaactatcaatagttttatatcattacatttcaattttttaatattaaaa 28540667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 37673833 - 37673898
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatgga 397  Q
    |||||||||||||||||||| ||||| ||| || ||| |||||||||||||||||||  |||||||    
T  37673833 cactaatcaactatcaataattttatatcactacattctaattttttaatattaaaagcgtatgga 37673898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 378
Target Start/End: Complemental strand, 7288284 - 7288228
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaatttttt 378  Q
    |||||||||  |||||||||||||| |||||||||| ||||||||| ||||||||||    
T  7288284 aaatgagacttactaatcaactatcgataactttatatcattatatattaatttttt 7288228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 10954144 - 10954200
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||| | ||||| |||||| |||| ||||||||||||||||||    
T  10954144 cactaatcaactatcaattattttatatcattacatttcaattttttaatattaaaa 10954200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 10962149 - 10962205
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||| | ||||| |||||| |||| ||||||||||||||||||    
T  10962149 cactaatcaactatcaattattttatatcattacatttcaattttttaatattaaaa 10962205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 13629113 - 13629169
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgt 392  Q
    ||||||||||||||||||||||  ||||| || | ||||||||||||||||||||||    
T  13629113 aatcaactatcaataactttataccattacatatcaattttttaatattaaaaatgt 13629169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 13729525 - 13729581
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgt 392  Q
    ||||||||||||||||||||||  ||||| || | ||||||||||||||||||||||    
T  13729525 aatcaactatcaataactttataccattacatatcaattttttaatattaaaaatgt 13729581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 35973459 - 35973515
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||| |||||||||| |||| ||||||||| | |||||||||||||||||||    
T  35973459 actaatcaattatcaataacattatatcattatatatcaattttttaatattaaaaa 35973515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 3628278 - 3628224
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||| |||||||||||| |||||| || | |||||||||||||||||||    
T  3628278 taatcaactagcaataactttatatcattacatctcaattttttaatattaaaaa 3628224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 9133864 - 9133799
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| ||||||||||||| ||| ||||| || ||||||||||| |||||| |||||||||||    
T  9133864 aaatgagactcactaatcaactaccaaaaactt-atatcattatatttcaattttctaatattaaaa 9133799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 14426182 - 14426248
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| ||||| |||| ||||||||| ||||| |||||  |||||||||||||||||||||||    
T  14426182 aaatgggactcactactcaattatcaataattttatatcatttaattttaattttttaatattaaaa 14426248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 28562371 - 28562305
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||| |||  ||| |||| |||||||||||||| | ||||||||| ||||||||||||||||||    
T  28562371 aaatgagtcacgataagcaacaatcaataactttatattattatatttcaattttttaatattaaaa 28562305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 1737797 - 1737854
Alignment:
Q  329 acacactaatcaactatcaataactttatgtcattatattttaattttttaatattaa 386  Q
    ||||| ||||||||||||||||||||||| | |||| |||| |||||||| |||||||    
T  1737797 acacattaatcaactatcaataactttatattattacatttcaatttttttatattaa 1737854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 386
Target Start/End: Original strand, 4797295 - 4797360
Alignment:
Q  322 aaatgagacacactaatcaactatcaataacttt-atgtcattatattttaattttttaatattaa 386  Q
    ||||| ||| || ||||||||||||||||||||| || |||| | |||||||||||||||||||||    
T  4797295 aaatgtgactcattaatcaactatcaataactttaatatcatcacattttaattttttaatattaa 4797360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 8673671 - 8673728
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||| |||||| |||||||| ||| || ||||| ||||||||||||||||||    
T  8673671 cactaatcaattatcaaaaactttatatcactacattttcattttttaatattaaaaa 8673728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 38937840 - 38937787
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||| |||||||| |||| | || |||||||||||||||||||||    
T  38937840 aatcaactatcaacaactttatatcatcacatattaattttttaatattaaaaa 38937787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 23036846 - 23036790
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||| ||||||||||||||| ||||| |||||| || | ||||||||||||||||||    
T  23036846 cactgatcaactatcaataattttatatcattacatatcaattttttaatattaaaa 23036790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 31128542 - 31128586
Alignment:
Q  256 actcatttataaattttcaatagtagtacctaatgagcattcaat 300  Q
    |||||||||||| |||| |||||||||||||||| ||||||||||    
T  31128542 actcatttataattttttaatagtagtacctaataagcattcaat 31128586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 40453127 - 40453083
Alignment:
Q  345 tcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||| | ||||| |||||||||||||||||||||||||    
T  40453127 tcaataactttgtatcattttattttaattttttaatattaaaaa 40453083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 13079959 - 13079888
Alignment:
Q  218 atttttggatacttaaatgagtcttatatgtgcatgttactcatttataaattttcaatagtagtacctaat 289  Q
    |||||| ||||||||||| ||||| |  ||| ||| | |||||||||||| |||| ||||||||||||||||    
T  13079959 attttttgatacttaaataagtctcacgtgtacatttcactcatttataatttttgaatagtagtacctaat 13079888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 369
Target Start/End: Original strand, 30714111 - 30714158
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattt 369  Q
    ||||| ||| |||||||||||||||||||||||||| |||||| ||||    
T  30714111 aaatgggactcactaatcaactatcaataactttatatcattacattt 30714158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 369
Target Start/End: Original strand, 30721888 - 30721935
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattt 369  Q
    ||||| ||| |||||||||||||||||||||||||| |||||| ||||    
T  30721888 aaatgggactcactaatcaactatcaataactttatatcattacattt 30721935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 9135201 - 9135096
Alignment:
Q  194 agagcatccacaaagaagacacatatttttggatacttaaatgagtcttatatgtgcatgttactcatttataaattttcaatagtagtacctaatgagc 293  Q
    ||||||| ||||| | ||||||  |||||||||| |||||||| |||| |  ||| ||| | ||||||||| || |||| |||||||||||||||| |||    
T  9135201 agagcattcacaatggagacactcatttttggattcttaaatgggtctcacgtgtacatatcactcatttacaattttt-aatagtagtacctaataagc 9135103  T
Q  294 attcaat 300  Q
    | |||||    
T  9135102 actcaat 9135096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 374
Target Start/End: Original strand, 23812644 - 23812686
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaatt 374  Q
    |||||||||||||||||||||||||| | ||||||||| ||||    
T  23812644 cactaatcaactatcaataactttatataattatatttcaatt 23812686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 388
Target Start/End: Complemental strand, 28557304 - 28557242
Alignment:
Q  326 gagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||||||||||||||||| |  ||||| | |||| |||| ||||||||||||||||||    
T  28557304 gagactcactaatcaactatcaacacttttatattattacatttcaattttttaatattaaaa 28557242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 1155198 - 1155268
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattat----attttaattttttaatattaaaa 388  Q
    |||||||||| | |||||||||| |||||||||||| ||||||     |||| ||||||||||||||||||    
T  1155198 aaatgagacatattaatcaactaccaataactttatatcattaattacatttcaattttttaatattaaaa 1155268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 4326115 - 4326066
Alignment:
Q  192 taagagcatccacaaagaagacacatatttttggatacttaaatgagtct 241  Q
    |||||||||||||||   |||||| |||||||||||||||||||| ||||    
T  4326115 taagagcatccacaattgagacacctatttttggatacttaaatgggtct 4326066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 390
Target Start/End: Complemental strand, 36316808 - 36316756
Alignment:
Q  337 atcaactatcaataactttatgtcattatattttaattttttaatattaaaaat 390  Q
    ||||||||||||||| ||||| |||||| |||| || |||||||||||||||||    
T  36316808 atcaactatcaataattttatatcattacatttcaa-tttttaatattaaaaat 36316756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 1155122 - 1155166
Alignment:
Q  256 actcatttataaattttcaatagtagtacctaatgagcattcaat 300  Q
    |||||||||||| |||| |||||||||| ||||| ||||||||||    
T  1155122 actcatttataattttttaatagtagtatctaataagcattcaat 1155166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 16461184 - 16461108
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatt 411  Q
    ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| | |||||||| |||||||||    
T  16461184 taatcaattatcaataactttatatcattatattttaagtttttaatattaaaaatatgtggatctcacttaagatt 16461108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 30865953 - 30865886
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||| |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  30865953 aaatgagactcactaatcaactatcaataactttatatcattacatttcaattttttaatattaaaaa 30865886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 35309047 - 35309110
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatatta 385  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35309047 aaatgggactcactaatcaactatcaataactttatatcattatattttaattttttaatatta 35309110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 39055224 - 39055157
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  39055224 aaatgaaacccactaatcaactatcaataactttatatcattacattttaattttttaatattaaaaa 39055157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 35382425 - 35382491
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||||    
T  35382425 aaatgagacacactaatcaactatcactaactttatatcattatatttcaatttttaaatattaaaa 35382491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 35332055 - 35332111
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  35332055 cactaatcaactatcaataactttatatcattatatttcaattttttaatattaaaa 35332111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 43968833 - 43968777
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  43968833 cactaatcaactatcaataactttatatcactatattttaattttttaatattaaaa 43968777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 53779428 - 53779492
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatc 399  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||| || ||||||    
T  53779428 taatcaactatcaataacttaatatcattatattttaattttttaatattaaaaaagtgtggatc 53779492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 49211089 - 49211023
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| || ||||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  49211089 aaatgagacccattaatcaattatcaataactttatatcattacattttaattttttaatattaaaa 49211023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 336 - 411
Target Start/End: Original strand, 10180689 - 10180764
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatt 411  Q
    |||||||||||||||||||||| |||||| || | ||||||||||||||||||| |||||| || | |||||||||    
T  10180689 aatcaactatcaataactttatatcattacatatcaattttttaatattaaaaaggtatgggtcccacttaagatt 10180764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 822441 - 822507
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||| |||||||||||||||||| |||| ||| || |||| ||||||||||||||||||    
T  822441 aaatgagacacattaatcaactatcaataacattatatcactacatttcaattttttaatattaaaa 822507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 24030676 - 24030614
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatg 395  Q
    ||||||||||||||||||||||||  | |||| |||||||||||||||||||||||| |||||    
T  24030676 actaatcaactatcaataactttacattattacattttaattttttaatattaaaaaagtatg 24030614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 407
Target Start/End: Complemental strand, 23359164 - 23359079
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaa 407  Q
    ||||||||  ||| |||||||||||||||||||||| | || |||||| ||||||||||||||||||  || |||||||| |||||    
T  23359164 aaatgagatccacaaatcaactatcaataactttatattataatatttcaattttttaatattaaaagagtgtggatctcgcttaa 23359079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 378
Target Start/End: Complemental strand, 22628530 - 22628474
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaatttttt 378  Q
    ||||| ||| |||||||||||||||||||||||||| |||||| |||||||||||||    
T  22628530 aaatgggactcactaatcaactatcaataactttatatcattacattttaatttttt 22628474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 411
Target Start/End: Original strand, 2574121 - 2574200
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatt 411  Q
    |||||||||||||| ||||||||||| |||||| |||| ||||||||||| ||||||  || |||||| | |||||||||    
T  2574121 cactaatcaactattaataactttatatcattacatttcaattttttaatgttaaaagagtgtggatcccgcttaagatt 2574200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 388
Target Start/End: Complemental strand, 8825014 - 8824960
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  8825014 actaatcaactatcaataactttatatcattatatttcaa-tttttaatattaaaa 8824960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 11347042 - 11346976
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| || ||||||| ||| ||||| ||||| |||||||||||||||||| |||||||||||    
T  11347042 aaatgagacgcattaatcaattattaataattttatatcattatattttaattttataatattaaaa 11346976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 380
Target Start/End: Complemental strand, 12447480 - 12447422
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaa 380  Q
    |||| |||| |||||||||||||||||||||||||| |||||| |||| ||||||||||    
T  12447480 aaataagacccactaatcaactatcaataactttatatcattacatttcaattttttaa 12447422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 39629255 - 39629321
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||  |||||| ||||||||||||| ||||| ||||||| ||| ||||||||||||||||||    
T  39629255 aaatgagatccactaaacaactatcaataattttatatcattatttttcaattttttaatattaaaa 39629321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 52199865 - 52199799
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| |||||||| ||||||||||| | ||| ||||||||||| ||||||||||||||||||    
T  52199865 aaatgggacccactaatccactatcaataattatatatcattatatttcaattttttaatattaaaa 52199799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 2322560 - 2322503
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||||||||||| || |||||| |||||| ||| |||||||||||||    
T  2322560 cactaatcaactatcaataacttaatatcattagattttactttcttaatattaaaaa 2322503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 2396350 - 2396293
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||||||||||||||||||| ||| || |||| || ||||||||||||||||    
T  2396350 cactaatcaactatcaataactttatatcagtacatttcaagtttttaatattaaaaa 2396293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 41916063 - 41916115
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  41916063 aatcaagtataaataattttatatcattatattttaattttttaatattaaaa 41916115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 54018511 - 54018583
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtat 394  Q
    |||||| || ||||||| |||| ||||||| ||||| | ||||||||| |||||||||||||||||| |||||    
T  54018511 aaatgaaacccactaataaactgtcaataattttatattattatatttcaattttttaatattaaaactgtat 54018583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 44500545 - 44500489
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||||  |||||  ||||| |||| ||||||||||||||||||    
T  44500545 cactaatcaactatcaatagttttataacattacatttcaattttttaatattaaaa 44500489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 52199941 - 52199897
Alignment:
Q  256 actcatttataaattttcaatagtagtacctaatgagcattcaat 300  Q
    |||||||||||| |||| |||||||||||||||| ||||||||||    
T  52199941 actcatttataattttttaatagtagtacctaataagcattcaat 52199897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 381
Target Start/End: Complemental strand, 26699068 - 26699009
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaat 381  Q
    ||||||||||||||||||||| || ||||||||||| |||||  || | |||||||||||    
T  26699068 aaatgagacacactaatcaacgattaataactttatatcattgaatatcaattttttaat 26699009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 28509468 - 28509522
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||| | |||||||||||||| |  ||| ||||||||||||||||||||||||    
T  28509468 taatcatcaatcaataactttatatgtttacattttaattttttaatattaaaaa 28509522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 388
Target Start/End: Original strand, 31262477 - 31262545
Alignment:
Q  323 aatgagacacactaatcaactatcaa---taactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||| ||| |||||||||||||||||   |||||||||  ||||| |||| ||||||||||||||||||    
T  31262477 aatgggacccactaatcaactatcaacaataactttataccattacatttcaattttttaatattaaaa 31262545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 53847302 - 53847355
Alignment:
Q  343 tatcaataactttatgtcattatattttaattttttaatattaaaaatgtatgga 397  Q
    ||||||||| ||||| |||||||||||||| |||||| |||||||||||| ||||    
T  53847302 tatcaataattttatatcattatattttaa-tttttattattaaaaatgtgtgga 53847355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 388
Target Start/End: Complemental strand, 45832617 - 45832565
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||| |||||||||||| || ||||||||||| || |||||||||||||||    
T  45832617 taatcaattatcaataactt-atatcattatatttcaaatttttaatattaaaa 45832565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 2066115 - 2066151
Alignment:
Q  191 ataagagcatccacaaagaagacacatatttttggat 227  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  2066115 ataagagcatccacaacgaagacatatatttttggat 2066151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 5036047 - 5036087
Alignment:
Q  348 ataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||| |||||| |||| ||||||||||||||||||    
T  5036047 ataactttatatcattacatttcaattttttaatattaaaa 5036087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 23607405 - 23607349
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| ||||||||||| || | || ||| |||||||||||| ||||||||||    
T  23607405 cactaatcagctatcaataacattttatctttacattttaatttttcaatattaaaa 23607349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 5e-20; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 36901099 - 36901165
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  36901099 aaatgagacctactaatcaactatcaataattttatatcattatattttaattttttaatattaaaa 36901165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 43302180 - 43302246
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  43302180 aaatgggacccactaatcaactatcaataactttatatcattatatttcaattttttaatattaaaa 43302246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 46282192 - 46282259
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||| |||||||||||    
T  46282192 aaatgagacccactaatcaactatcaataattttatatcattatgttttaatttttgaatattaaaaa 46282259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 417
Target Start/End: Complemental strand, 19594098 - 19594016
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatttagagt 417  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||| ||||||| || ||| |||| ||||||||| |||||    
T  19594098 taattaactatcaataactttatatcattatatttcaattttttaatcttaaaaaggtgtgggtctcacttaagattgagagt 19594016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 23156302 - 23156368
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| || ||||||||||||||||||||||| ||| || |||||||||||||||||||||||    
T  23156302 aaatgagacccattaatcaactatcaataactttatatcactacattttaattttttaatattaaaa 23156368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 36482068 - 36482134
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||  |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  36482068 aaatgagattcactaatcaactatcaataactttatataattatatttcaattttttaatattaaaa 36482134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 44441349 - 44441415
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| |||||||||||||||||||||||||| ||| || |||||||||||||||||||||||    
T  44441349 aaatgggacccactaatcaactatcaataactttatatcactacattttaattttttaatattaaaa 44441415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 48767219 - 48767286
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||| |||||||||||||||||||||||||| |||||  |||| ||||||||| |||||||||    
T  48767219 aaatgagacccactaatcaactatcaataactttatatcattgcatttcaattttttattattaaaaa 48767286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 4874941 - 4874995
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  4874941 taatcaactatcaataactttatatcattacattttaatttttaaatattaaaaa 4874995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 36039106 - 36039044
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatg 395  Q
    |||||||||||||| |||||||||| ||||||||||| | |||||||||||||||||| ||||    
T  36039106 actaatcaactatcgataactttatatcattatatttcatttttttaatattaaaaatatatg 36039044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 36657950 - 36658016
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| |||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||    
T  36657950 aaatgggacccactaatcaactatcaataattttataccattatattttaatattttaatattaaaa 36658016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 39853831 - 39853769
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatatt 384  Q
    ||||| ||| ||||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  39853831 aaatgggacccactaatcaactatcaataactttataccattatatttcaattttttaatatt 39853769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 31330456 - 31330367
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatt 411  Q
    |||||||||  ||||||||||||||||||| | ||| |||||| |||| ||||||||||||||||||  |||||  |||| |||||||||    
T  31330456 aaatgagacgtactaatcaactatcaataagtatatatcattacatttcaattttttaatattaaaatagtatgtgtctcacttaagatt 31330367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 410
Target Start/End: Complemental strand, 4958300 - 4958212
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagat 410  Q
    |||||| || ||| ||||||||||||| |||||||| |||||| || | ||||||||||||||||||| || |||||| | ||||||||    
T  4958300 aaatgaaacccacaaatcaactatcaacaactttatatcattacatatcaattttttaatattaaaaaggtgtggatcccacttaagat 4958212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 425
Target Start/End: Complemental strand, 38224037 - 38223933
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatttagagt-tta 420  Q
    ||||||||| ||  ||||||||||||||||| |||| |||||| || | ||||||||||||||||||| || ||| || | ||||||||| ||||| |||    
T  38224037 aaatgagactcaaaaatcaactatcaataacattatatcattacatataaattttttaatattaaaaaggtgtgggtcccacttaagattgagagtctta 38223938  T
Q  421 agtga 425  Q
    |||||    
T  38223937 agtga 38223933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 37698550 - 37698484
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||| || ||||||| ||||||||| |||||||| ||| || |||||||||||||||||||||||    
T  37698550 aaatgaaacccactaataaactatcaacaactttatatcactacattttaattttttaatattaaaa 37698484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 395
Target Start/End: Complemental strand, 2008638 - 2008578
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatg 395  Q
    ||||||||||||||||| |||||  ||||| |||| ||||||||||||||||||| |||||    
T  2008638 taatcaactatcaataattttataccattacatttcaattttttaatattaaaaaagtatg 2008578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 15018430 - 15018374
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||| ||||||||||||||| | |||| |||||||||||| |||||||||||    
T  15018430 actaatcaattatcaataactttatattattacattttaatttttgaatattaaaaa 15018374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 417
Target Start/End: Original strand, 19753042 - 19753118
Alignment:
Q  341 actatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatttagagt 417  Q
    ||||||||||| ||||| |||||| |||| ||||||||||| ||||||| || ||| |||| ||||||||| |||||    
T  19753042 actatcaataattttatatcattacatttcaattttttaatcttaaaaaggtgtgggtctcacttaagattgagagt 19753118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 411
Target Start/End: Original strand, 25324573 - 25324651
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatt 411  Q
    ||||||||| |||||||||| ||||| |||||||||   ||||||||||||||||||| || ||| |||| |||||||||    
T  25324573 cactaatcagctatcaataattttatatcattatataacaattttttaatattaaaaa-gtgtgggtctcacttaagatt 25324651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 29914477 - 29914528
Alignment:
Q  334 ctaatcaactatcaataactttatgtcattatattttaattttttaatatta 385  Q
    |||||||||||||||||||||||| | |||| |||| |||||||||||||||    
T  29914477 ctaatcaactatcaataactttatattattacatttcaattttttaatatta 29914528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 36656670 - 36656737
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||| ||  |||||||||| ||||||||||| |||||| || | |||||||||||||||||||    
T  36656670 aaatgagacccataaatcaactattaataactttatatcattacatatcaattttttaatattaaaaa 36656737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 47841484 - 47841551
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||| ||| ||||||||||||||||||||||  ||| | || | |||||||||||||||||||    
T  47841484 aaatgagactcacaaatcaactatcaataactttataccatcacatatcaattttttaatattaaaaa 47841551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 2888179 - 2888137
Alignment:
Q  349 taactttatgtcattatattttaattttttaatattaaaaatg 391  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  2888179 taactttatatcattatatttcaattttttaatattaaaaatg 2888137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 5513909 - 5513975
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| |||||||| || |||||||||||||| | |||| |||| |||||||| |||||||||    
T  5513909 aaatgagactcactaatcgaccatcaataactttatataattacatttcaatttttttatattaaaa 5513975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 44441653 - 44441587
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| ||||||||||||||||| ||||  || |||||| | || ||||||||||||||||||    
T  44441653 aaatgagacccactaatcaactatcaacaactggatatcattacacttcaattttttaatattaaaa 44441587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 6068149 - 6068092
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||| |||||| ||| | |||||| |||| |||||||||||||||||||    
T  6068149 cactaatcaactaccaataattttctatcattacatttcaattttttaatattaaaaa 6068092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 13057921 - 13057864
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattt-taattttttaatattaaaaa 389  Q
    ||||||||||||||||||||||||| |||| | ||||  |||||||||||||||||||    
T  13057921 actaatcaactatcaataactttatatcataacatttcaaattttttaatattaaaaa 13057864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 43095561 - 43095504
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||| || |||| ||||||| || ||||||||||| |||||||||||||||||||    
T  43095561 cactaattaattatcgataacttcatatcattatatttcaattttttaatattaaaaa 43095504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 387
Target Start/End: Original strand, 3373275 - 3373315
Alignment:
Q  347 aataactttatgtcattatattttaattttttaatattaaa 387  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  3373275 aataactttatattattatattttaattttttaatattaaa 3373315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 21122071 - 21122111
Alignment:
Q  349 taactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  21122071 taactttatattattatattttaattttttaatattaaaaa 21122111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 391
Target Start/End: Complemental strand, 31027322 - 31027263
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatg 391  Q
    ||||||||| |||||||||||||||| |||| ||||||| || ||||||| || ||||||    
T  31027322 cactaatcatctatcaataactttatatcataatatttttatattttaatctttaaaatg 31027263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 369
Target Start/End: Original strand, 41172572 - 41172619
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattt 369  Q
    |||||||||||||||||||| ||||| ||||||||| |||||| ||||    
T  41172572 aaatgagacacactaatcaattatcattaactttatatcattacattt 41172619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 27334421 - 27334367
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||| |||||||||||| ||| |||||| |||| ||| |||||||||||||||    
T  27334421 taatcatctatcaataactctatatcattacatttcaatattttaatattaaaaa 27334367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 389
Target Start/End: Complemental strand, 32724272 - 32724226
Alignment:
Q  343 tatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||| |||||| || | |||||||||||||||||||    
T  32724272 tatcaataactttatatcattacatatcaattttttaatattaaaaa 32724226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 388
Target Start/End: Original strand, 46748101 - 46748155
Alignment:
Q  334 ctaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||| ||||||||||||| |||||| || | |||| |||||||||||||    
T  46748101 ctaatcaactgtcaataactttatatcattacatatcaattatttaatattaaaa 46748155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 32724439 - 32724394
Alignment:
Q  190 aataagagcatccacaaagaagacacatatttttggatacttaaat 235  Q
    ||||||||||||||||| | |||||| ||||||||| |||||||||    
T  32724439 aataagagcatccacaatggagacacctatttttgggtacttaaat 32724394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 2375610 - 2375544
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  2375610 aaatgggacccactaatcaactatcaataactttatataattatattttaattttttaatattaaaa 2375544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 13420770 - 13420836
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  13420770 aaatgggactcactaatcaactatcaataactttatataattatatttcaattttttaatattaaaa 13420836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 1309833 - 1309890
Alignment:
Q  331 acactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  1309833 acactaatcaattatcaataattttatatcattatattttaattttttaatattaaaa 1309890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 13486636 - 13486580
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  13486636 cactaatcagctatcaataactttatatcattatatttcaattttttaatattaaaa 13486580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 14642291 - 14642344
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  14642291 taatcaactatcaataactttatatcattatattttaa-tttttaatattaaaaa 14642344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 6761440 - 6761497
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||||| |||| |||||||| |||||| ||||||||||||||||||||||||    
T  6761440 cactaatcaactgtcaacaactttatatcattacattttaattttttaatattaaaaa 6761497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 42951794 - 42951862
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaat 390  Q
    ||||||||| |||||||||| ||||||||| ||||| ||| || |||| ||||||||||||||||||||    
T  42951794 aaatgagacccactaatcaattatcaataattttatatcactacatttcaattttttaatattaaaaat 42951862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 12593188 - 12593121
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaa-ttttttaatattaaaa 388  Q
    |||||||||  ||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  12593188 aaatgagaccaactaatcaattatcaataactttatatcattacattttaacttttttaatattaaaa 12593121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 390
Target Start/End: Complemental strand, 20420220 - 20420163
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaat 390  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||| ||||| ||||    
T  20420220 actaatcaactatcaataactttatatcattatatatcaattttttattattagaaat 20420163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 7293098 - 7293042
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||| ||||||||||||| |||| |||||| |||| ||||||||||||||||||    
T  7293098 cactaattaactatcaataacattatatcattacatttcaattttttaatattaaaa 7293042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 389
Target Start/End: Complemental strand, 22579715 - 22579668
Alignment:
Q  342 ctatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||||    
T  22579715 ctatcaataactttatataattacattttaattttttaatattaaaaa 22579668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 18396580 - 18396646
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| ||| |||||||||| ||||||||||| |||  |||||| ||||||||||||||||||    
T  18396580 aaatgggacccaccaatcaactataaataactttatatcacaatatttcaattttttaatattaaaa 18396646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 26675541 - 26675607
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||| |||| |||||||||| ||||||||||||||| |||| | | || ||||||||||||||||||    
T  26675541 aaattagacccactaatcaaatatcaataactttatatcatcacacttcaattttttaatattaaaa 26675607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 26947149 - 26947215
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||| |||| |||||||||| ||||||||||||||| |||| | | || ||||||||||||||||||    
T  26947149 aaattagacccactaatcaaatatcaataactttatatcatcacacttcaattttttaatattaaaa 26947215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 34382547 - 34382601
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||| |||||||||| ||||| |||||| |||||||| |||||||||||||||    
T  34382547 taatcatctatcaataattttatatcattacattttaatattttaatattaaaaa 34382601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 386
Target Start/End: Original strand, 35463304 - 35463354
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaattttttaatattaa 386  Q
    |||||||||||||||| ||||| ||||||| ||| ||||||||||||||||    
T  35463304 aatcaactatcaataattttatatcattatgtttcaattttttaatattaa 35463354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 35982187 - 35982138
Alignment:
Q  341 actatcaataactttatgtcattatattttaattttttaatattaaaaat 390  Q
    ||||| ||||||||||| | ||||||||| ||||||||||||||||||||    
T  35982187 actataaataactttatataattatatttcaattttttaatattaaaaat 35982138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 15468194 - 15468250
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||  ||||||||| ||||| |||||| |||| ||||||||||||||||||    
T  15468194 cactaatcatttatcaataattttatatcattaaatttcaattttttaatattaaaa 15468250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 3558834 - 3558767
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||| ||| || ||||||||||||||||||||||  | |||| || | |||||||||||||||||||    
T  3558834 aaatgggacccattaatcaactatcaataactttaaattattagatatcaattttttaatattaaaaa 3558767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 388
Target Start/End: Complemental strand, 11200783 - 11200732
Alignment:
Q  337 atcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||||||||| ||||| | |||| || ||||||||||||||||||||    
T  11200783 atcaactatcaataattttatattattacatattaattttttaatattaaaa 11200732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 381
Target Start/End: Original strand, 1666847 - 1666893
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaat 381  Q
    ||||||||||||||||||||||| || |||||| | |||||||||||    
T  1666847 taatcaactatcaataactttatatcgttatatctcaattttttaat 1666893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 29558386 - 29558344
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttt 377  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||    
T  29558386 taatcaactatcaataattttatatcattacattttaattttt 29558344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 26675419 - 26675492
Alignment:
Q  210 agacacatatttttggatacttaaatgagtcttatatgtgcatgttactcatttataaattttcaatagtagta 283  Q
    ||||||| |||||||| ||| |||||| |||| |||||| ||  | |||||||||||| |||| ||||||||||    
T  26675419 agacacacatttttgggtacctaaatgggtctcatatgtacacatcactcatttataattttttaatagtagta 26675492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 26947027 - 26947100
Alignment:
Q  210 agacacatatttttggatacttaaatgagtcttatatgtgcatgttactcatttataaattttcaatagtagta 283  Q
    ||||||| |||||||| ||| |||||| |||| |||||| ||  | |||||||||||| |||| ||||||||||    
T  26947027 agacacacatttttgggtacctaaatgggtctcatatgtacacatcactcatttataattttttaatagtagta 26947100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 28998064 - 28998125
Alignment:
Q  327 agacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||| ||||||||| |||| ||||||||||| |||||| |||||  || |||||||||||||    
T  28998064 agacccactaatcatctataaataactttatatcattacattttgtttatttaatattaaaa 28998125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 411
Target Start/End: Original strand, 41520924 - 41521013
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatt 411  Q
    ||||| ||| ||| ||| ||||||||||||||||||  ||||| || | ||||||||| ||||||||| || ||| || | |||||||||    
T  41520924 aaatgggacccacaaattaactatcaataactttataccattacatatcaattttttactattaaaaaggtgtgggtcccacttaagatt 41521013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 7e-19; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 32658497 - 32658553
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  32658497 cactaatcaactatcaataactttatatcagtatattttaattttttaatattaaaa 32658553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 25099128 - 25099074
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaa 387  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  25099128 actaatcaactatcaataattttatatcattatattttaattttttaatattaaa 25099074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 387787 - 387697
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattata-ttttaattttttaatattaaaaatgtatggatctctcttaagatt 411  Q
    |||| |||| |||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||  | |||||| | |||||||||    
T  387787 aaataagacccactaatcaactatcaataactttatattattatatttttaattttttaatatttaaaaaatgtggatcccacttaagatt 387697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 5002432 - 5002498
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| |||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||    
T  5002432 aaatgggacccactaatcaactatcaataactttatattattatatttcaatttttaaatattaaaa 5002498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 9491836 - 9491884
Alignment:
Q  341 actatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  9491836 actatcaataactttatatcattacattttaattttttaatattaaaaa 9491884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 21941003 - 21941059
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||| |||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  21941003 cactaataaactatcaataactttatgttactatatttcaattttttaatattaaaa 21941059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 22281839 - 22281895
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||    
T  22281839 cactaatcaaccatcaataactttatatcattatatttcaattttttaacattaaaa 22281895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 411
Target Start/End: Original strand, 7693995 - 7694074
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgtatggatctctcttaagatt 411  Q
    ||||||||||||||||||||||| || ||| || |||| ||||||||||||||||||| || | | || |||||||||||    
T  7693995 cactaatcaactatcaataacttcatatcaatacatttcaattttttaatattaaaaaagtgtaggtccctcttaagatt 7694074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 388
Target Start/End: Complemental strand, 6988227 - 6988172
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||||||||||||| ||||| |||| | |||||||||||||||||||||||    
T  6988227 actaaacaactatcaataattttatatcatcacattttaattttttaatattaaaa 6988172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 32977434 - 32977500
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||| ||| ||||||||||||||||||||||||||  || || |||| |||||||||| |||||||    
T  32977434 aaatgggacccactaatcaactatcaataactttataccactacatttcaattttttaacattaaaa 32977500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 18804249 - 18804305
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||||||| ||||| | |||| |||| ||||| |||||||||||||    
T  18804249 actaatcaactatcaataattttatattattacatttcaatttattaatattaaaaa 18804305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 6459141 - 6459074
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||  ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  6459141 aaatgagacttactaatcaactatcaataattttctatcattatattttaattttttaatattaaaaa 6459074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 5038763 - 5038707
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  5038763 cactaatcaactatcaataattttatattattatattttaattttttaatattaaaa 5038707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 34234946 - 34234879
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||| |||| |||||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||    
T  34234946 aaattagacccactaatcaattatcaataactttatatcattacatttcaattttttaatattaaaaa 34234879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 44887302 - 44887368
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||  || ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  44887302 aaatgagatccaataatcaactatcaataaatttatatcattatatttcaattttttaatattaaaa 44887368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 32887674 - 32887730
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||| ||||||||||| | |||| |||||||||||||||||||||||    
T  32887674 cactaatcaactataaataactttatattattacattttaattttttaatattaaaa 32887730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 34820955 - 34821011
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaattttttaatattaaaaatgt 392  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||| ||||||    
T  34820955 aatcaactatcagtaactttatatcattacattttaattttttaatattacaaatgt 34821011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 388
Target Start/End: Complemental strand, 11921995 - 11921940
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||| |||||||||||| |||||| ||| |||||||||||||||||||    
T  11921995 actaatcaactaccaataactttatatcattagattctaattttttaatattaaaa 11921940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 13022786 - 13022853
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||| || |||||||||||||||||||| ||||| | |||| |||| |||||||||||||||||||    
T  13022786 aaatgaaactcactaatcaactatcaataaatttatattattacatttcaattttttaatattaaaaa 13022853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 387
Target Start/End: Complemental strand, 40999730 - 40999675
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaa 387  Q
    ||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  40999730 cactaatcaaccatcaataactttatatcattatatttcaatcttttaatattaaa 40999675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 36887631 - 36887697
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    ||||||||  |||||||||||||||||||| ||||| |||||  |||| ||||||||||||||||||    
T  36887631 aaatgagatccactaatcaactatcaataaatttatatcattgcatttcaattttttaatattaaaa 36887697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 26312523 - 26312470
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatatta 385  Q
    ||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||    
T  26312523 cactaatcaactaccaataactttatgtcattacatttctattttttaatatta 26312470  T

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Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 15269399 - 15269291
Alignment:
Q  192 taagagcatccacaaagaagacacatatttttggatacttaaatgagtcttatatgtgcatgttactcatttataaattttcaatagtagtacctaatga 291  Q
    ||||||||||||||| | ||| ||  |||||| | |||||||||| |||| | |||| ||  |||||||||||||| |||| ||||||||| |||||| |    
T  15269399 taagagcatccacaatggagatacccatttttcggtacttaaatgggtctcacatgtacacattactcatttataattttttaatagtagtgcctaataa 15269300  T
Q  292 gcattcaat 300  Q
    | |||||||    
T  15269299 gtattcaat 15269291  T

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Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 45135810 - 45135758
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||||||||||||||| ||||||||||| | || |||||||||||||    
T  45135810 aatcaactatcaataactttatatcattatatttcagttatttaatattaaaa 45135758  T

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Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 378
Target Start/End: Original strand, 6710946 - 6710989
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaatttttt 378  Q
    ||||||||||||||||||||||| |||||| |||||||||||||    
T  6710946 taatcaactatcaataactttatatcattacattttaatttttt 6710989  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 379
Target Start/End: Original strand, 41068866 - 41068909
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaatttttta 379  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  41068866 aatcaactatcaataactttatatcattatatttcaatttttta 41068909  T

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Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 11922146 - 11922036
Alignment:
Q  192 taagagcatccacaaagaagacacatatttttggatacttaaatgagtcttatatgtgcatgttactcatttataaattttcaatagtagtacctaatga 291  Q
    ||||||||||||||| | ||||||  ||||||   |||||||||| |||| |  ||| ||  |||||||||||||| |||| |||||||||||||||  |    
T  11922146 taagagcatccacaatggagacactcatttttaattacttaaatgggtctcacgtgtacacattactcatttataattttttaatagtagtacctaaaaa 11922047  T
Q  292 gcattcaattc 302  Q
    ||| |||||||    
T  11922046 gcactcaattc 11922036  T

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Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 37648364 - 37648422
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaa-ttttttaatattaaaaatgt 392  Q
    |||||||| |||||||| ||||| |||| ||||||||| ||||||||||||||||||||    
T  37648364 taatcaaccatcaataattttatatcataatattttaatttttttaatattaaaaatgt 37648422  T

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Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 16117988 - 16118041
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||||||||||||||| |||||||||    ||||||||||||||||||    
T  16117988 aatcaactatcaataactttatatcattatataaccattttttaatattaaaaa 16118041  T

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Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 26297164 - 26297112
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaa 387  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||||    
T  26297164 taatcaactatcaataactttatatcaccacatttcaattttttaatattaaa 26297112  T

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Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 389
Target Start/End: Original strand, 65455 - 65522
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||  || ||||||||||||||||| ||| | |||||| |||| |||||||| ||||||||||    
T  65455 aaatgagaaccattaatcaactatcaataagtttgtatcattacatttcaatttttttatattaaaaa 65522  T

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Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 34375111 - 34375045
Alignment:
Q  322 aaatgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||| ||| || ||||||||||||||||||||||| | |||| |||| || ||||||||||||||||    
T  34375111 aaatgggacccattaatcaactatcaataactttatattattacatttcaa-tttttaatattaaaaa 34375045  T

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Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 6562986 - 6562937
Alignment:
Q  339 caactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||||||| |||||| |||| || ||||||||||||||||    
T  6562986 caactatcaataactttatatcattacatttcaa-tttttaatattaaaaa 6562937  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 26312609 - 26312563
Alignment:
Q  256 actcatttataaattttcaatagtagtacctaatgagcattcaattc 302  Q
    |||||||||||| |||| |||||||||||||||| |||| |||||||    
T  26312609 actcatttataattttttaatagtagtacctaataagcactcaattc 26312563  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 3668890 - 3668837
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatatta 385  Q
    ||||||| ||||||| |||| ||||| ||||||  |||||||||||||||||||    
T  3668890 cactaattaactatcgataattttatatcattacgttttaattttttaatatta 3668837  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 3949044 - 3949109
Alignment:
Q  324 atgagacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||| | ||| |||| ||||||||||||||| |||||| |||| |||||| |||| |||||||    
T  3949044 atgagactctctagtcaattatcaataactttatatcattacatttcaattttataatgttaaaaa 3949109  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 16341985 - 16341932
Alignment:
Q  336 aatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||||||||||||||| || ||| ||   |||||||||||||||||||    
T  16341985 aatcaactatcaataactttatatctttacataacaattttttaatattaaaaa 16341932  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 9583194 - 9583138
Alignment:
Q  332 cactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||| | ||||||||||||  ||||||||||| |||||||||  |||||||    
T  9583194 cactaatcaattgtcaataactttacatcattatatttcaattttttatcattaaaa 9583138  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 44583437 - 44583493
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||| |||| |||| ||||| |||| | |||| |||||||||||||||||||    
T  44583437 actaatcaaatatccataaatttatatcatcacatttcaattttttaatattaaaaa 44583493  T

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Target: scaffold0991 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 2951 - 3012
Alignment:
Q  328 gacacactaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||| |||||    
T  2951 gacacactaatccactatcaataattttatatcattatatttcaattttttaatataaaaaa 3012  T

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Target: scaffold0712 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 6133 - 6189
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||||||| ||||| | ||||||| | |||||||||||||||||||    
T  6133 actaatcaactatcaataattttatattattatatatcaattttttaatattaaaaa 6189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 6151 - 6207
Alignment:
Q  333 actaatcaactatcaataactttatgtcattatattttaattttttaatattaaaaa 389  Q
    ||||||||||||||||||| ||||| | ||||||| | |||||||||||||||||||    
T  6151 actaatcaactatcaataattttatattattatatatcaattttttaatattaaaaa 6207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 388
Target Start/End: Original strand, 31877 - 31929
Alignment:
Q  335 taatcaactatcaataactttatgtcattatattttaattttttaatattaaaa 388  Q
    |||||||||| |||||||||||| | |||||| ||||| |||||||||||||||    
T  31877 taatcaactaacaataactttatatgattata-tttaaatttttaatattaaaa 31929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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