View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0801_low_9 (Length: 281)

Name: NF0801_low_9
Description: NF0801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0801_low_9
NF0801_low_9
[»] chr3 (47 HSPs)
chr3 (80-271)||(1337118-1337312)
chr3 (31-168)||(42758415-42758552)
chr3 (31-168)||(39655183-39655320)
chr3 (31-168)||(49580105-49580242)
chr3 (49-168)||(6738315-6738434)
chr3 (31-170)||(7469686-7469825)
chr3 (31-168)||(4557215-4557352)
chr3 (31-168)||(29284377-29284514)
chr3 (35-168)||(4015954-4016087)
chr3 (31-168)||(44953345-44953482)
chr3 (31-168)||(48390727-48390864)
chr3 (31-167)||(54317185-54317321)
chr3 (31-165)||(34025995-34026129)
chr3 (31-168)||(43582618-43582755)
chr3 (31-168)||(52572650-52572787)
chr3 (51-171)||(39728732-39728852)
chr3 (31-169)||(44252788-44252926)
chr3 (80-169)||(10371182-10371271)
chr3 (31-168)||(44639315-44639452)
chr3 (31-165)||(22535754-22535888)
chr3 (79-169)||(29858484-29858574)
chr3 (31-128)||(42243428-42243525)
chr3 (72-168)||(23546858-23546954)
chr3 (49-168)||(20087056-20087175)
chr3 (31-139)||(52198196-52198304)
chr3 (49-164)||(48305555-48305670)
chr3 (77-167)||(831089-831179)
chr3 (74-168)||(44106704-44106797)
chr3 (31-126)||(10043234-10043329)
chr3 (49-160)||(23910170-23910281)
chr3 (52-165)||(23153978-23154091)
chr3 (31-164)||(23580868-23581001)
chr3 (49-169)||(19111793-19111913)
chr3 (35-131)||(34119701-34119797)
chr3 (31-168)||(53631945-53632082)
chr3 (31-115)||(34154455-34154539)
chr3 (80-155)||(49025758-49025833)
chr3 (72-168)||(10823612-10823708)
chr3 (49-132)||(3385802-3385885)
chr3 (31-97)||(44172667-44172733)
chr3 (31-97)||(44179367-44179433)
chr3 (31-100)||(30616259-30616328)
chr3 (31-96)||(35687473-35687538)
chr3 (52-132)||(27252626-27252706)
chr3 (51-102)||(2490366-2490417)
chr3 (49-108)||(4553249-4553308)
chr3 (135-169)||(52200360-52200394)
[»] chr4 (50 HSPs)
chr4 (49-168)||(37349177-37349296)
chr4 (31-168)||(6382183-6382320)
chr4 (31-168)||(11028120-11028257)
chr4 (31-168)||(31918469-31918606)
chr4 (31-168)||(26564878-26565015)
chr4 (31-170)||(21423908-21424047)
chr4 (31-169)||(31752503-31752641)
chr4 (31-169)||(43893275-43893412)
chr4 (31-168)||(55826534-55826671)
chr4 (31-168)||(11122780-11122917)
chr4 (31-168)||(44317582-44317719)
chr4 (72-169)||(5902530-5902627)
chr4 (31-164)||(7609017-7609150)
chr4 (49-168)||(19882967-19883086)
chr4 (31-115)||(43309530-43309614)
chr4 (49-168)||(1724181-1724299)
chr4 (30-169)||(19548848-19548986)
chr4 (30-164)||(6481950-6482084)
chr4 (31-169)||(15987172-15987310)
chr4 (51-169)||(41914906-41915024)
chr4 (31-169)||(47550263-47550401)
chr4 (80-168)||(53906249-53906337)
chr4 (35-142)||(7985062-7985169)
chr4 (76-165)||(32585575-32585664)
chr4 (72-168)||(19534537-19534633)
chr4 (49-133)||(39086222-39086306)
chr4 (49-168)||(7334108-7334227)
chr4 (38-108)||(11696872-11696942)
chr4 (49-114)||(12505505-12505571)
chr4 (31-108)||(10302131-10302208)
chr4 (49-165)||(21956728-21956844)
chr4 (31-115)||(37107458-37107541)
chr4 (49-168)||(12075543-12075661)
chr4 (31-102)||(14605902-14605973)
chr4 (49-168)||(39047017-39047136)
chr4 (51-142)||(39375345-39375436)
chr4 (51-169)||(30673028-30673146)
chr4 (31-168)||(1866460-1866597)
chr4 (80-169)||(39188598-39188687)
chr4 (49-130)||(42299853-42299934)
chr4 (49-168)||(36919188-36919307)
chr4 (51-108)||(31415902-31415959)
chr4 (51-168)||(45065316-45065433)
chr4 (31-168)||(48459528-48459665)
chr4 (31-82)||(1724307-1724358)
chr4 (31-78)||(12825462-12825509)
chr4 (36-95)||(39665841-39665900)
chr4 (49-115)||(25265129-25265194)
chr4 (36-122)||(43553498-43553584)
chr4 (171-239)||(56252221-56252289)
[»] chr5 (41 HSPs)
chr5 (31-168)||(4920867-4921004)
chr5 (32-169)||(10127116-10127253)
chr5 (31-169)||(33727911-33728049)
chr5 (31-168)||(15890247-15890384)
chr5 (36-169)||(29245861-29245994)
chr5 (31-165)||(20973410-20973544)
chr5 (31-168)||(4583160-4583297)
chr5 (31-170)||(5908597-5908736)
chr5 (50-168)||(18207078-18207196)
chr5 (31-155)||(12866475-12866599)
chr5 (31-168)||(13401915-13402052)
chr5 (31-168)||(40517847-40517984)
chr5 (31-155)||(12834498-12834622)
chr5 (77-168)||(35311900-35311991)
chr5 (49-127)||(38972981-38973059)
chr5 (31-168)||(17853204-17853340)
chr5 (49-164)||(3564655-3564768)
chr5 (49-168)||(6155831-6155950)
chr5 (49-168)||(30996655-30996773)
chr5 (66-164)||(22694817-22694915)
chr5 (80-168)||(12447459-12447546)
chr5 (31-155)||(40187581-40187705)
chr5 (49-163)||(6092445-6092559)
chr5 (66-155)||(42717554-42717643)
chr5 (77-164)||(1218812-1218899)
chr5 (51-168)||(2681277-2681394)
chr5 (51-115)||(28568985-28569049)
chr5 (49-149)||(39422405-39422505)
chr5 (49-168)||(16311204-16311323)
chr5 (51-96)||(18116500-18116545)
chr5 (64-168)||(27088284-27088386)
chr5 (80-169)||(38006391-38006480)
chr5 (51-96)||(43523809-43523854)
chr5 (92-168)||(18451834-18451910)
chr5 (42-164)||(24207736-24207857)
chr5 (49-129)||(32574887-32574968)
chr5 (51-137)||(23044933-23045019)
chr5 (65-147)||(33420279-33420361)
chr5 (31-169)||(42987390-42987527)
chr5 (80-165)||(6810236-6810321)
chr5 (70-106)||(28278651-28278687)
[»] chr6 (40 HSPs)
chr6 (31-155)||(5863306-5863430)
chr6 (32-167)||(10187991-10188126)
chr6 (31-168)||(30986294-30986431)
chr6 (31-164)||(32853885-32854018)
chr6 (31-169)||(3483832-3483970)
chr6 (30-168)||(12678004-12678142)
chr6 (31-168)||(2367367-2367504)
chr6 (34-168)||(31496478-31496612)
chr6 (34-168)||(31501864-31501998)
chr6 (31-168)||(27534725-27534862)
chr6 (31-169)||(28079605-28079743)
chr6 (49-168)||(12141444-12141563)
chr6 (31-132)||(15498365-15498466)
chr6 (31-168)||(20349105-20349242)
chr6 (31-168)||(27738813-27738950)
chr6 (31-168)||(32532581-32532718)
chr6 (51-169)||(10142427-10142545)
chr6 (80-168)||(12309668-12309756)
chr6 (52-168)||(14255019-14255135)
chr6 (31-169)||(29341297-29341435)
chr6 (83-168)||(14034583-14034668)
chr6 (31-131)||(9442471-9442570)
chr6 (80-168)||(14506164-14506252)
chr6 (80-168)||(24225794-24225882)
chr6 (80-169)||(24602777-24602866)
chr6 (31-126)||(32053129-32053218)
chr6 (72-168)||(34178245-34178341)
chr6 (31-87)||(256483-256539)
chr6 (60-124)||(1947746-1947810)
chr6 (31-127)||(13769113-13769209)
chr6 (31-141)||(11762486-11762596)
chr6 (51-115)||(9458724-9458788)
chr6 (171-238)||(9977624-9977691)
chr6 (51-94)||(18908954-18908997)
chr6 (64-130)||(30816332-30816398)
chr6 (56-101)||(30624481-30624526)
chr6 (80-168)||(9402666-9402754)
chr6 (56-96)||(9458924-9458964)
chr6 (26-106)||(19367045-19367125)
chr6 (51-115)||(20610945-20611009)
[»] chr8 (42 HSPs)
chr8 (31-168)||(20399633-20399770)
chr8 (31-169)||(32303102-32303240)
chr8 (31-168)||(24927990-24928127)
chr8 (31-168)||(27932454-27932592)
chr8 (31-168)||(35215577-35215713)
chr8 (31-168)||(1012660-1012796)
chr8 (35-168)||(40248281-40248414)
chr8 (31-168)||(43113536-43113673)
chr8 (31-155)||(4230653-4230777)
chr8 (49-168)||(2075744-2075863)
chr8 (31-164)||(5858566-5858699)
chr8 (43-168)||(27777108-27777233)
chr8 (31-155)||(29108745-29108869)
chr8 (31-169)||(37960871-37961009)
chr8 (31-128)||(14155573-14155670)
chr8 (80-168)||(1063603-1063691)
chr8 (80-168)||(17469333-17469421)
chr8 (49-168)||(17220771-17220892)
chr8 (72-168)||(11254925-11255021)
chr8 (72-168)||(34777142-34777238)
chr8 (51-170)||(15068496-15068615)
chr8 (49-168)||(34139506-34139630)
chr8 (31-165)||(39445489-39445623)
chr8 (31-169)||(45236106-45236244)
chr8 (36-164)||(14687445-14687573)
chr8 (31-124)||(6388470-6388563)
chr8 (31-168)||(24869934-24870071)
chr8 (71-131)||(29416134-29416194)
chr8 (30-115)||(15173843-15173928)
chr8 (49-149)||(8545279-8545378)
chr8 (49-128)||(12468171-12468248)
chr8 (84-130)||(5700438-5700484)
chr8 (51-96)||(2183588-2183633)
chr8 (31-164)||(17084027-17084154)
chr8 (83-168)||(36131839-36131924)
chr8 (31-115)||(27056518-27056602)
chr8 (49-137)||(28345550-28345638)
chr8 (49-96)||(29918666-29918713)
chr8 (51-132)||(30481367-30481448)
chr8 (31-75)||(9642354-9642398)
chr8 (51-155)||(10297519-10297623)
chr8 (32-168)||(24568980-24569115)
[»] chr2 (36 HSPs)
chr2 (31-168)||(30846988-30847125)
chr2 (31-169)||(37106734-37106872)
chr2 (35-169)||(13830781-13830915)
chr2 (31-155)||(37472682-37472806)
chr2 (31-164)||(24414046-24414179)
chr2 (41-168)||(12341652-12341779)
chr2 (31-169)||(9632428-9632566)
chr2 (49-169)||(10920698-10920818)
chr2 (31-163)||(45115600-45115734)
chr2 (49-168)||(19104747-19104866)
chr2 (31-168)||(31942095-31942233)
chr2 (80-169)||(6027810-6027899)
chr2 (31-169)||(13705264-13705408)
chr2 (31-168)||(36128016-36128153)
chr2 (51-169)||(26755802-26755920)
chr2 (31-168)||(10208341-10208477)
chr2 (31-168)||(12193736-12193874)
chr2 (49-167)||(18106029-18106148)
chr2 (77-168)||(42797911-42798001)
chr2 (49-140)||(44746047-44746138)
chr2 (31-168)||(37999525-37999656)
chr2 (31-129)||(40734533-40734631)
chr2 (51-132)||(7314594-7314675)
chr2 (49-168)||(10212466-10212585)
chr2 (83-132)||(35965416-35965465)
chr2 (35-100)||(45256869-45256934)
chr2 (31-107)||(15546786-15546862)
chr2 (49-127)||(13954805-13954883)
chr2 (49-127)||(14096012-14096090)
chr2 (31-168)||(8915848-8915984)
chr2 (30-127)||(35248336-35248433)
chr2 (31-96)||(35510425-35510490)
chr2 (51-137)||(44057945-44058031)
chr2 (31-96)||(22900836-22900901)
chr2 (51-96)||(30978987-30979032)
chr2 (31-75)||(6027892-6027936)
[»] chr1 (46 HSPs)
chr1 (31-168)||(17134989-17135126)
chr1 (31-169)||(36187129-36187267)
chr1 (31-169)||(51421900-51422038)
chr1 (31-168)||(23968621-23968758)
chr1 (31-168)||(49250683-49250820)
chr1 (68-168)||(29936501-29936601)
chr1 (31-169)||(24710889-24711027)
chr1 (31-168)||(5181081-5181218)
chr1 (31-164)||(44615389-44615522)
chr1 (31-164)||(44793047-44793180)
chr1 (31-165)||(19572425-19572559)
chr1 (31-168)||(39616334-39616472)
chr1 (31-168)||(16408984-16409120)
chr1 (31-168)||(34673192-34673329)
chr1 (31-168)||(45866096-45866232)
chr1 (49-168)||(9982800-9982919)
chr1 (77-168)||(20774654-20774745)
chr1 (49-168)||(24236671-24236790)
chr1 (49-167)||(13390457-13390574)
chr1 (31-168)||(23490681-23490818)
chr1 (68-168)||(50426565-50426665)
chr1 (49-168)||(13020653-13020772)
chr1 (49-167)||(34611133-34611251)
chr1 (31-128)||(13798280-13798377)
chr1 (31-168)||(18353990-18354127)
chr1 (31-166)||(29871198-29871332)
chr1 (31-129)||(33293480-33293578)
chr1 (52-168)||(35936736-35936855)
chr1 (31-115)||(10778530-10778614)
chr1 (49-115)||(34085295-34085361)
chr1 (31-97)||(42707818-42707884)
chr1 (68-169)||(28298025-28298126)
chr1 (51-163)||(5293321-5293432)
chr1 (49-169)||(12495070-12495190)
chr1 (49-127)||(2514817-2514896)
chr1 (41-168)||(40087374-40087500)
chr1 (51-168)||(19003576-19003693)
chr1 (86-168)||(3627907-3627989)
chr1 (83-169)||(16433088-16433174)
chr1 (31-167)||(42439581-42439717)
chr1 (54-105)||(35069862-35069913)
chr1 (51-105)||(16237277-16237331)
chr1 (84-170)||(49740934-49741020)
chr1 (51-96)||(23058528-23058573)
chr1 (65-130)||(41476900-41476965)
chr1 (193-225)||(9492353-9492385)
[»] chr7 (58 HSPs)
chr7 (31-167)||(10072512-10072648)
chr7 (31-169)||(17885511-17885649)
chr7 (31-168)||(35074516-35074653)
chr7 (31-168)||(45885675-45885812)
chr7 (31-168)||(21702705-21702842)
chr7 (31-168)||(25905674-25905811)
chr7 (31-169)||(30650677-30650815)
chr7 (31-168)||(16866215-16866352)
chr7 (31-168)||(43507491-43507628)
chr7 (32-168)||(37182321-37182457)
chr7 (31-168)||(24753210-24753346)
chr7 (35-167)||(7780058-7780190)
chr7 (58-168)||(17851925-17852035)
chr7 (31-164)||(12980423-12980556)
chr7 (31-168)||(37218051-37218188)
chr7 (31-168)||(38139702-38139839)
chr7 (31-140)||(39455953-39456062)
chr7 (31-155)||(16079059-16079183)
chr7 (31-168)||(18825776-18825919)
chr7 (31-165)||(18125141-18125275)
chr7 (31-168)||(27850242-27850373)
chr7 (49-155)||(37579325-37579431)
chr7 (49-155)||(44658390-44658496)
chr7 (32-169)||(39317042-39317179)
chr7 (35-168)||(41741360-41741493)
chr7 (30-165)||(5377130-5377265)
chr7 (49-168)||(38152951-38153069)
chr7 (83-168)||(24425466-24425551)
chr7 (33-168)||(2630484-2630618)
chr7 (43-166)||(37195921-37196044)
chr7 (31-168)||(3226856-3226993)
chr7 (80-169)||(26004395-26004484)
chr7 (31-168)||(44734269-44734404)
chr7 (51-168)||(44785168-44785285)
chr7 (31-140)||(45380153-45380261)
chr7 (80-168)||(23533526-23533614)
chr7 (51-170)||(30839041-30839161)
chr7 (52-168)||(44985828-44985944)
chr7 (36-115)||(8906552-8906631)
chr7 (80-155)||(23475198-23475273)
chr7 (51-137)||(3157149-3157234)
chr7 (80-169)||(26623034-26623123)
chr7 (51-168)||(27063204-27063321)
chr7 (51-96)||(42908023-42908068)
chr7 (80-168)||(3920621-3920706)
chr7 (82-168)||(23457156-23457242)
chr7 (83-168)||(19439932-19440017)
chr7 (51-96)||(22973454-22973499)
chr7 (31-72)||(25979923-25979964)
chr7 (31-96)||(27896457-27896522)
chr7 (31-96)||(31426054-31426119)
chr7 (35-155)||(41103706-41103820)
chr7 (31-115)||(33841124-33841207)
chr7 (54-106)||(44845107-44845159)
chr7 (31-82)||(10995830-10995881)
chr7 (54-96)||(43218352-43218394)
chr7 (51-96)||(18684040-18684085)
chr7 (83-168)||(43550339-43550424)
[»] scaffold0022 (1 HSPs)
scaffold0022 (35-155)||(90642-90756)
[»] scaffold0014 (1 HSPs)
scaffold0014 (31-164)||(14098-14230)
[»] scaffold0519 (1 HSPs)
scaffold0519 (72-168)||(10372-10468)
[»] scaffold0795 (1 HSPs)
scaffold0795 (77-168)||(311-401)
[»] scaffold0027 (1 HSPs)
scaffold0027 (31-169)||(7738-7875)
[»] scaffold0036 (1 HSPs)
scaffold0036 (31-169)||(33434-33578)
[»] scaffold0184 (1 HSPs)
scaffold0184 (51-102)||(3030-3081)
[»] scaffold0157 (1 HSPs)
scaffold0157 (49-114)||(14906-14972)
[»] scaffold0005 (1 HSPs)
scaffold0005 (31-102)||(211405-211476)
[»] scaffold0294 (1 HSPs)
scaffold0294 (49-115)||(14834-14900)
[»] scaffold0008 (2 HSPs)
scaffold0008 (51-168)||(67810-67927)
scaffold0008 (51-168)||(75653-75770)
[»] scaffold0002 (1 HSPs)
scaffold0002 (56-101)||(449768-449813)
[»] scaffold0244 (1 HSPs)
scaffold0244 (51-115)||(4545-4608)


Alignment Details
Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 80 - 271
Target Start/End: Original strand, 1337118 - 1337312
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaa----ccacgggtatgggttttattgtcatgcctaccgagca 175  Q
    ||||||||||||||||||||| |||| || |||||||||||||| |||| ||| |||||    ||||||||||||||||| ||| |||||||||| ||||    
T  1337118 acccaaacccagtcaaaacggggaaatcc-gtcaaaatgggtttagttcaggcgggtaattaaccacgggtatgggttttgttgccatgcctaccaagca 1337216  T
Q  176 ttctcaaagcatgatcaaaacagattaaccctagtctaataaatcgtactttatgcaagtacaactatctaggtaatggaaaaatatgtacctttg 271  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||    
T  1337217 ttctcaaggcatgatcaaaacagattaaccctagtctgataaatcgtacttcctgcaagtgcaactatctagctaatggaaaaatatgtacctttg 1337312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 42758415 - 42758552
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||| |||||||||||||| | ||||||||||||||||||||||||||| ||||||| ||||| | |||||| ||||||||| ||||    
T  42758415 ttacccgtcccatacctgtgttttgaaatcgggggaaacccaaactcatacccaaacccagttaaaacggggaaaatccgtcaaattgggtttggatcgg 42758514  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||||||||| ||| ||||||||    
T  42758515 gcgggtaaccacgggtatgggttttgttgccatgccta 42758552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 39655320 - 39655183
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || |||||||||||||| ||||||||| ||||||| |||||| ||||||||||||||    
T  39655320 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgg 39655221  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||||||||| ||| ||||||||    
T  39655220 gcgggtaaccacgggtatgggttttgttgccatgccta 39655183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 49580105 - 49580242
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||    
T  49580105 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgg 49580204  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || | |||||||||||||||||||| ||||||||||||    
T  49580205 gcggataaccacgggtatgggttttgttgtcatgccta 49580242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 6738434 - 6738315
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||| ||||||||| || ||||||||||||||||||||||||  |||||| |||||| |||||||||||||||| ||||||| |||||||    
T  6738434 tgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaacctgtcaaattgggtttggttcgggcgggtaaccgcgggtat 6738335  T
Q  149 gggttttattgtcatgccta 168  Q
    ||||||||||| ||||||||    
T  6738334 gggttttattgccatgccta 6738315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 7469825 - 7469686
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||| | ||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  7469825 ttacccgtcccatacccgtgtttcgagatcagggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 7469726  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctacc 170  Q
    || |||||||||||||||||||||| ||| ||||||||||    
T  7469725 gcgggtaaccacgggtatgggttttgttgccatgcctacc 7469686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 4557352 - 4557215
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||| ||| |||||||||||| ||||||||||||||||||||||||  |||||| |||||| ||||||| ||||||    
T  4557352 ttacccgtcccatacccatgttttgaaaacggggaaaacccaaacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggttttgttcgg 4557253  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |  |||||||||||||||| ||||| ||||||||||||    
T  4557252 gtgggtaaccacgggtatgagttttgttgtcatgccta 4557215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 29284377 - 29284514
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || |||||  |||||||| || |||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  29284377 ttacccgtcccatacccgtgtttcgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgg 29284476  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||| ||||| ||| ||||||||    
T  29284477 gcgggtaaccacgggtatgagttttgttgccatgccta 29284514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 168
Target Start/End: Complemental strand, 4016087 - 4015954
Alignment:
Q  35 ccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctg 134  Q
    ||||| ||||||  |||||||||||||| |||||||||||| |||||||||||| |||||||||||  |||||| |||||| || |||| |||||||  |    
T  4016087 ccgtcccatacccatgttttgaaatcggggaaaacccaaacccatacccaaacctagtcaaaacgggaaaaacccgtcaaattgagtttcgttcgggtgg 4015988  T
Q  135 gtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||||||||||||||||||| ||| ||||||||    
T  4015987 gtaaccacgggtatgggttttgttgccatgccta 4015954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 44953482 - 44953345
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || || ||||||||||||||||||||| ||||||| |||||| |||||||||||||     
T  44953482 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcga 44953383  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||||||||||||  |||| ||| ||||||||    
T  44953382 gcgggtaaccacgggtatgaattttgttgccatgccta 44953345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 48390864 - 48390727
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||| | |||||| ||| |||||||||     
T  48390864 ttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggttcga 48390765  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     | ||||||| |||||||||||||| ||| ||||||||    
T  48390764 acgggtaaccgcgggtatgggttttgttgccatgccta 48390727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 167
Target Start/End: Original strand, 54317185 - 54317321
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||||||  |||| | |||||||||||||| |||||| ||||| ||||| |||||||||||||||||| ||||||| |||||| ||| ||||||||||    
T  54317185 ttacccgtcctatacttgtgttttgaaatcggggaaaactcaaacacatactcaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgg 54317284  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcct 167  Q
    || ||||||||||| ||||| |||| ||| |||||||    
T  54317285 gcgggtaaccacggatatggattttgttgccatgcct 54317321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 34025995 - 34026129
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| || |||| |||||||||||||||||||  |||| | |||||| ||| ||||||||||    
T  34025995 ttacccgtcccatacctgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacgggaaaaaaccgtcaaattggttttggttcgg 34026094  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgc 165  Q
    |  ||||||| |||||||||||||| ||| |||||    
T  34026095 gagggtaaccgcgggtatgggttttgttgccatgc 34026129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 43582618 - 43582755
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||||||||  |||||||||||||| |||||| || || ||||| |||||||||| |||||||||||||||  ||||| ||| ||||||||||    
T  43582618 ttacccgtctcatacccgtgttttgaaatcggggaaaactcatacacatactcaaacccagtaaaaacggagaaaacccatcaaattggatttggttcgg 43582717  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||| ||| |||||||||| |||  |||||||    
T  43582718 gcgggtaaccgcggatatgggttttgttgcaatgccta 43582755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 52572650 - 52572787
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||  |||||| || || ||||||||||||||||||||| || ||||||| |||||| || |||||||||||    
T  52572650 ttacccgtcccatacccgtgttttgagatcgaggaaaactcatacccatacccaaacccagtcaaaatggggaaaacctgtcaaattgagtttggttcgg 52572749  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || | |||||||||||||||||||| ||| ||||||||    
T  52572750 gcggataaccacgggtatgggttttgttgccatgccta 52572787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 39728732 - 39728852
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||||| ||||  ||||||| | ||||||||||||||||||||||||||| ||||| | |||||| ||| |||||||||| | |||||||||||||||||    
T  39728732 ttttgagatcgaggaaaacctatactcatacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgg 39728831  T
Q  151 gttttattgtcatgcctaccg 171  Q
    ||||| ||| |||||||||||    
T  39728832 gttttgttgccatgcctaccg 39728852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 44252788 - 44252926
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||| |||| ||||||  ||||| || ||||| ||||||||| || |||||||||||||||||||||||| ||||||| |||||| | |||||| |||||    
T  44252788 ttacacgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaatttggtttgattcgg 44252887  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
     | ||||||||||||||||| |||| ||| |||||||||    
T  44252888 acgggtaaccacgggtatggattttgttgccatgcctac 44252926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 10371271 - 10371182
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||| || ||||||||||||| |||||||| |||||||||||||    
T  10371271 acccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgagcgggtaaccacgggtctgggttttgttgtcatgcctac 10371182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 44639315 - 44639452
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||  | ||||||||| || ||||||||||||||||||||| || |||||||||||||| ||||||| ||||||    
T  44639315 ttacccgtcccatacccgtgttttgagatatgggaaaacccatacccatacccaaacccagtcaaaatggggaaaaccagtcaaattgggtttcgttcgg 44639414  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     | ||||||||||| |||| ||||| ||| ||||||||    
T  44639415 acgggtaaccacggatatgagttttgttgccatgccta 44639452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 22535888 - 22535754
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| |||| |  ||||||||||| || |||||| || || |||||||||||||||||||||||| |||||||  ||||| || |||||||||||    
T  22535888 ttacccgtcccatatccgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttcgg 22535789  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgc 165  Q
    || | ||||| |||||||||||||| ||| |||||    
T  22535788 gcggataaccgcgggtatgggttttgttgccatgc 22535754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 29858574 - 29858484
Alignment:
Q  79 tacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |||||||||||||||||||||| ||||| | || ||| |||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  29858574 tacccaaacccagtcaaaacggggaaaatccgttaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctac 29858484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 42243428 - 42243525
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttc 128  Q
    |||||| |||||||||  ||| ||||||||||  |||||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  42243428 ttacccatctcatacccgtgtattgaaatcgggaaaaacccaaactcatacccaaacccagtcaaaccggggaaaacccgtcaaattgggtttggttc 42243525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 23546954 - 23546858
Alignment:
Q  72 aaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||| |||||||||||||||||||||||| ||||||| || ||| ||||||||||||  || |||||||||||||||||||||| ||| ||||||||    
T  23546954 aaacccatacccaaacccagtcaaaacggggaaaacccgttaaattgggtttggttcatgcgggtaaccacgggtatgggttttgttgccatgccta 23546858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 20087056 - 20087175
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||| ||||||||| || |||| ||||||||||||||||||||||||| | |||||| ||| ||||||||  || ||||||| | |||||    
T  20087056 tgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattggatttggttccagcaggtaaccgctggtat 20087155  T
Q  149 gggttttattgtcatgccta 168  Q
    || |||| ||| ||||||||    
T  20087156 ggattttgttgccatgccta 20087175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 52198196 - 52198304
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||| |||||||| |||||  |||||||| || |||||||||||||||||||||| || |||||| |||||| | ||||||||| ||    
T  52198196 ttacccgtcccatacctgtgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacagaaaaaacccgtcaaattaggtttggtttgg 52198295  T
Q  131 gctggtaac 139  Q
    || ||||||    
T  52198296 gcgggtaac 52198304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 48305670 - 48305555
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||||||||| || |||||| || || |||| |||||||||||||||| || ||||||| |||| | |||||||||||||||  ||||||| |||||||    
T  48305670 tgttttgaaattggggaaaactcatacccataaccaaacccagtcaaaatggggaaaacccgtcagattgggtttggttcgggtgggtaaccgcgggtat 48305571  T
Q  149 gggttttattgtcatg 164  Q
    || |||| ||||||||    
T  48305570 ggattttgttgtcatg 48305555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 831089 - 831179
Alignment:
Q  77 catacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcct 167  Q
    |||||||||||||||||||||||| ||||||| |||||| | ||||||||| |||| ||||||||||| |||| ||||| ||||| |||||    
T  831089 catacccaaacccagtcaaaacggggaaaacccgtcaaatttggtttggtttgggcgggtaaccacggatatgagttttgttgtcttgcct 831179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 44106797 - 44106704
Alignment:
Q  74 actcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||||||||||||||||||||||||| ||||||| |||||| || |||| |||||||| ||||| |||||||||| ||||| ||| ||||||||    
T  44106797 actcatacccaaacccagtcaaaacggggaaaacc-gtcaaattgagttttgttcgggcgggtaatcacgggtatgtgttttgttgccatgccta 44106704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 10043329 - 10043234
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggt 126  Q
    ||||||||| ||||||  |||||||||| | | |||||||||||| ||||||||||||||||||||  |||||||||| |||||| |||| |||||    
T  10043329 ttacccgtcccatacccatgttttgaaaccagggaaaacccaaacccatacccaaacccagtcaaagtggagaaaacccgtcaaattggggttggt 10043234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 23910281 - 23910170
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||  |||||| ||||||||||| ||||||||||||||||||| |||| | |||||| ||  || | ||||| | |||||||||| ||||    
T  23910281 tgttttgaaatcgaggaaaactcaaactcatacacaaacccagtcaaaacggaaaaaatccgtcaaattgaattcgattcggacaggtaaccacgagtat 23910182  T
Q  149 gggttttattgt 160  Q
    ||||||| ||||    
T  23910181 gggttttgttgt 23910170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 165
Target Start/End: Complemental strand, 23154091 - 23153978
Alignment:
Q  52 tttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatggg 151  Q
    ||||||||||| ||||||||| || ||||||||||| |||| |||||||  |||||| |||||| |||| ||||||| ||| ||||||| ||| |||||     
T  23154091 tttgaaatcggggaaaacccatacccatacccaaactcagttaaaacgggaaaaacccgtcaaattggggttggttccggcgggtaaccgcggatatgga 23153992  T
Q  152 ttttattgtcatgc 165  Q
    |||| ||| |||||    
T  23153991 ttttgttgccatgc 23153978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 23580868 - 23581001
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||||| ||||||   ||||||||||| || |||||| || || ||||||||||||||||||||||||  |||||| |||||| ||  |||  |||||    
T  23580868 ttacccgtttcatactcgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgaatttaattcgg 23580967  T
Q  131 gctggtaaccacgggtatgggttttattgtcatg 164  Q
    || ||||||| | |||||| ||||| ||||||||    
T  23580968 gcaggtaaccgcaggtatgtgttttgttgtcatg 23581001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 19111793 - 19111913
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||||||||||||  ||||| |||||||||||||||||||| |||||| ||  |||| | |||||| ||| |||||||  ||   |||||||||| |||    
T  19111793 tgttttgaaatcgggaaaaactcaaactcatacccaaacccaatcaaaaagggaaaaatccgtcaaattggatttggtttaggtgagtaaccacggatat 19111892  T
Q  149 gggttttattgtcatgcctac 169  Q
    | ||||| |||||||||||||    
T  19111893 gagttttgttgtcatgcctac 19111913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 34119701 - 34119797
Alignment:
Q  35 ccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcggg 131  Q
    ||||||||||||  |||||| |||||||  ||||| |||||||||||||||||||| |||||| || ||||||| |||||| | | |||||||||||    
T  34119701 ccgtctcatacccgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaatcaaaatggggaaaacccgtcaaattagatttggttcggg 34119797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 53631945 - 53632082
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||||||||||||   |||||| ||||  | |||||| ||||| |||||| | ||||| ||||||||  ||||||| |||||| |  ||||||||||     
T  53631945 ttacccgtctcatacacgtgttttaaaatttgggaaaactcaaacccatacctatacccattcaaaacgaggaaaacccgtcaaattaagtttggttcga 53632044  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     |  ||||||||||||||| ||||||||| ||||||||    
T  53632045 acgagtaaccacgggtatgagttttattgccatgccta 53632082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 34154455 - 34154539
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    |||||||| |||||||  |||||||||||||| |||||| || || |||| ||||||||||||||||||| ||||| | ||||||    
T  34154455 ttacccgtttcatacccatgttttgaaatcggggaaaacacatacccatatccaaacccagtcaaaacggggaaaatccgtcaaa 34154539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 49025758 - 49025833
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggtttt 155  Q
    ||||||||||||||||||| |  ||||||  ||||| |||||||||||| ||| ||||||||||||||||| ||||    
T  49025758 acccaaacccagtcaaaacaggaaaaacccatcaaattgggtttggttcaggcgggtaaccacgggtatggatttt 49025833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 10823708 - 10823612
Alignment:
Q  72 aaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||| |||||||||||| |||||||| ||| |||||  |||||| ||  ||||||| |||| |||||| ||||||||| ||||| ||| ||||||||    
T  10823708 aaacccatacccaaacctagtcaaaatggaaaaaactcgtcaaattgaatttggtttgggcgggtaacgacgggtatgagttttgttgccatgccta 10823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 3385885 - 3385802
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggc 132  Q
    ||||||||||| ||| ||||  ||||  |||||| ||||||||||||| ||| ||||||| ||| || ||||||||||||||||    
T  3385885 tgttttgaaatgggtaaaaattcaaatccatacctaaacccagtcaaagcggggaaaacccgtcgaattgggtttggttcgggc 3385802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 44172667 - 44172733
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaa 97  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || ||||| |||||||||||||||    
T  44172667 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatactcaaacccagtcaaaa 44172733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 44179367 - 44179433
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaa 97  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || ||||| |||||||||||||||    
T  44179367 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatactcaaacccagtcaaaa 44179433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 30616328 - 30616259
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacgg 100  Q
    ||||||||| |||| |  |||||||||||||| |||||||||||| ||||| ||||  ||||||||||||    
T  30616328 ttacccgtcccatatccgtgttttgaaatcggggaaaacccaaacccatactcaaattcagtcaaaacgg 30616259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 35687538 - 35687473
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    ||||||||||| ||||  | || ||||||||| |||||| ||||||||||| ||||||||||||||    
T  35687538 ttacccgtctcgtacccgtattatgaaatcggggaaaactcaaactcatactcaaacccagtcaaa 35687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 27252626 - 27252706
Alignment:
Q  52 tttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggc 132  Q
    |||||||| || |||||| |||||||||||||||||||| ||||| | || |||||| |||||| | | ||| ||||||||    
T  27252626 tttgaaattggagaaaactcaaactcatacccaaacccaatcaaatccgataaaacccgtcaaattagatttagttcgggc 27252706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 2490366 - 2490417
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggag 102  Q
    |||||||||||| |||||| ||||| |||| ||||||||||||||| |||||    
T  2490366 ttttgaaatcggggaaaactcaaacccatatccaaacccagtcaaatcggag 2490417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 4553249 - 4553308
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaacc 108  Q
    ||||||||||||||  ||||| ||||| |||||| || |||||||||| |||||||||||    
T  4553249 tgttttgaaatcgggaaaaactcaaacgcatacctaagcccagtcaaagcggagaaaacc 4553308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 52200360 - 52200394
Alignment:
Q  135 gtaaccacgggtatgggttttattgtcatgcctac 169  Q
    ||||||||||||||| |||||||||||||||||||    
T  52200360 gtaaccacgggtatgagttttattgtcatgcctac 52200394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 37349177 - 37349296
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||    
T  37349177 tgttttgaaatcggggaaaactcaaactcatacccaaacccagtcaaaacggggaaaacctgtcaaattgggtttggttcgggcgggtaaccacgggtat 37349276  T
Q  149 gggttttattgtcatgccta 168  Q
    ||||||| ||| ||||||||    
T  37349277 gggttttgttgccatgccta 37349296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 6382320 - 6382183
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || |||||||||||||||||||| ||| ||||||| |||||| |||||||| |||||    
T  6382320 ttacccgtcccatacccgtgttttgagatcggagaaaacccatacccatacccaaacccagtcaaagcggggaaaacccgtcaaattgggtttgattcgg 6382221  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||||||||||||| ||||||||    
T  6382220 gcgggtaaccacgggtatgggttttattgccatgccta 6382183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 11028120 - 11028257
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||    
T  11028120 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaatccagtcaaaacggagaaaacccgtcaaattgggtttggttcgg 11028219  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |  |||||||||| ||||||||||| ||| ||||||||    
T  11028220 gtgggtaaccacgtgtatgggttttgttgccatgccta 11028257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 31918606 - 31918469
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||| |||| ||||||  ||||| || ||||| ||||||||| ||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  31918606 ttactcgtcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 31918507  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||||||| |||||||||| ||| ||||||||    
T  31918506 gcaggtaaccacggatatgggttttgttgccatgccta 31918469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 26564878 - 26565015
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||   ||||||||||||| |||| | ||||||||||||||||||||||||||||| |||||| | |||||| ||| ||||||||||    
T  26564878 ttacccgtcccatacccgcgttttgaaatcggggaaagctcaaactcatacccaaacccagtcaaaacgaagaaaatccgtcaaattggatttggttcgg 26564977  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |  |||||||||||||||||||||| ||| ||||||||    
T  26564978 gtgggtaaccacgggtatgggttttgttgccatgccta 26565015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 21423908 - 21424047
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||||||||  ||||| || || || ||||||||| || ||||||||||||||||||||||||  |||| | |||||| ||| ||||||||||    
T  21423908 ttacccgtctcatacccgtgtttcgagattggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaatccgtcaaattggatttggttcgg 21424007  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctacc 170  Q
    || |||||||||||||||| ||||||||| ||||||||||    
T  21424008 gcgggtaaccacgggtatgagttttattgccatgcctacc 21424047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 31752503 - 31752641
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||| |||||||||||  |||||||||||||| ||||||||| || |||| ||||||||| |||||||||  |||||| |||||| ||| |||| |||||    
T  31752503 ttactcgtctcatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaacggtaaaaacccgtcaaattggatttgattcgg 31752602  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || ||||||| |||||||||||||| |||||||||||||    
T  31752603 gcgggtaaccgcgggtatgggttttgttgtcatgcctac 31752641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 43893275 - 43893412
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||||| |||| |||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  43893275 ttacccgtcccatacccgtgtttcgagatcggggaaa-cccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggctcgg 43893373  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || |||||||||||||||||||||| ||| |||||||||    
T  43893374 gcgggtaaccacgggtatgggttttgttgccatgcctac 43893412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 55826671 - 55826534
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||| ||||| || ||||| ||||||||| ||||||| ||||||||||||||||| | ||||| | |||||| ||| ||||||||||    
T  55826671 ttacccgtcccatacctgtgtttcgagatcggggaaaacccatactcatatccaaacccagtcaaaacagggaaaatccgtcaaattggatttggttcgg 55826572  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     | |||||||||||||||||||||| ||| ||||||||    
T  55826571 acgggtaaccacgggtatgggttttgttgccatgccta 55826534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 11122917 - 11122780
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||||| ||||||||| || ||||||||||| ||||||||||||| |||| | |||||| || |||||||||||    
T  11122917 ttacccgtcccatacccgtgtttcgagatcggagaaaacccatacccatacccaaactcagtcaaaacggaaaaaatccgtcaaattgagtttggttcgg 11122818  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||| ||||| ||| ||||||||    
T  11122817 gcgggtaaccacgggtatgagttttgttgccatgccta 11122780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 44317582 - 44317719
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||||| ||||||||| || |||||||||||||||||||||||| ||||| | |||||| |||||||| |||||    
T  44317582 ttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttgattcgg 44317681  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||  ||||||||||||||||||||| ||| | ||||||    
T  44317682 gcgagtaaccacgggtatgggttttgttgccttgccta 44317719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 5902627 - 5902530
Alignment:
Q  72 aaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |||| |||||||||||||||||||||||| ||||||| |||||| || ||||||||||||| ||||||||||||||| |||||| ||| |||||||||    
T  5902627 aaacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtataggttttgttgccatgcctac 5902530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 7609017 - 7609150
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||||| ||||||||| || |||||||||| ||||||||||||| ||||||| |||||| ||||||| ||||||    
T  7609017 ttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaatccagtcaaaacggggaaaacccgtcaaattgggtttagttcgg 7609116  T
Q  131 gctggtaaccacgggtatgggttttattgtcatg 164  Q
    |  |||||||||| ||||||||||| ||| ||||    
T  7609117 gtgggtaaccacgagtatgggttttgttgccatg 7609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 19883086 - 19882967
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||| ||||||| |||||||||||||||||| |||||||| ||||| |||  |||||| |||||| |||||||||||||||| ||||  | || ||||    
T  19883086 tgttttaaaatcggggaaaacccaaactcatactcaaacccaatcaaagcgggaaaaacccgtcaaattgggtttggttcgggcgggtattcgcgagtat 19882987  T
Q  149 gggttttattgtcatgccta 168  Q
    ||||||| ||| ||||||||    
T  19882986 gggttttgttgccatgccta 19882967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 43309530 - 43309614
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  43309530 ttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaagcggagaaaacccgtcaaa 43309614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 1724299 - 1724181
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||| |||||| ||||||  |||||| || ||||||||||||  ||||| |||||||||    
T  1724299 tgttttgaaatcgggaaaaacccaaacccatacccaaacccagtc-aaacggggaaaacacgtcaaattgagtttggttcgggtgggtaaacacgggtat 1724201  T
Q  149 gggttttattgtcatgccta 168  Q
    | ||||| ||  ||||||||    
T  1724200 gagttttgttaccatgccta 1724181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 19548986 - 19548848
Alignment:
Q  30 tttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcg 129  Q
    |||||||||| | ||||| |||||||||||||| ||||||||  |  ||||||||||||||||||||  || ||||||| |||||| |||||||||||||    
T  19548986 tttacccgtcccgtacctgtgttttgaaatcggggaaaacccttatccatacccaaacccagtcaaagaggggaaaacc-gtcaaattgggtttggttcg 19548888  T
Q  130 ggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    ||  |||| |||  |||||| ||||| |||||||| ||||    
T  19548887 ggtaggtacccataggtatgagttttgttgtcatgtctac 19548848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 6482084 - 6481950
Alignment:
Q  30 tttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcg 129  Q
    ||||| |||| ||||||  |||||| |||| || |||||||||||| |||||||||||||| ||||||| ||||||| | |||||| || ||||| ||||    
T  6482084 tttactcgtcccatacccgtgtttttaaattggggaaaacccaaacccatacccaaacccaatcaaaacagagaaaatccgtcaaattgagtttgattcg 6481985  T
Q  130 ggctggtaaccacgggtatgggttttattgtcatg 164  Q
    ||  | ||||||||||||| |||||| ||| ||||    
T  6481984 ggtggataaccacgggtataggttttgttgccatg 6481950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 15987310 - 15987172
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||| || ||||||  |||||| ||||| | |||||| || || |||||||||||||| |||||| |||||||||| |||||| ||||||||||||||    
T  15987310 ttacccatcccatacccgtgttttaaaatctgggaaaactcatacccatacccaaacccaatcaaaatggagaaaacccgtcaaattgggtttggttcgg 15987211  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |  ||||||| ||  | |||||||| ||| |||||||||    
T  15987210 gtgggtaaccgcgaatgtgggttttgttgccatgcctac 15987172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 41915024 - 41914906
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| ||| ||||| |  |||||  ||| |||||| |||| | || ||| ||| ||||    
T  41915024 ttttgaaatcggggaaaacccaaactcatacccgaacccagtcaaatcggggaaaatccatcaaatcggggttggtttgggcggttacccatgggcatgg 41914925  T
Q  151 gttttattgtcatgcctac 169  Q
    ||||| |||||||||||||    
T  41914924 gttttgttgtcatgcctac 41914906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 47550401 - 47550263
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| |||||| || ||  |||||||||||||||||||| || ||||| | | |||| || |||||||||||    
T  47550401 ttacccgtcccatacccgtgttttgagatcggggaaaactcatacctatacccaaacccagtcaaaatggggaaaatccgccaaattgagtttggttcgg 47550302  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || |||||||||  ||||||||||| ||  |||||||||    
T  47550301 gcgggtaaccacatgtatgggttttgtttccatgcctac 47550263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 53906337 - 53906249
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||||||||||||||||  |||||| |||||| |||||||||||||||| | |||||  ||||||||||||| ||| ||||||||    
T  53906337 acccaaacccagtcaaaacgggaaaaacccgtcaaattgggtttggttcgggcggataaccgtgggtatgggttttgttgccatgccta 53906249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 142
Target Start/End: Complemental strand, 7985169 - 7985062
Alignment:
Q  35 ccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctg 134  Q
    ||||| ||||||  |||||||||||||| ||||| ||||||| ||||||||||||| |||||||   ||||||| |||||| |||||||||||| ||| |    
T  7985169 ccgtcccatacccatgttttgaaatcggagaaaatccaaacttatacccaaacccaatcaaaaccaggaaaacccgtcaaattgggtttggttcaggcgg 7985070  T
Q  135 gtaaccac 142  Q
     |||||||    
T  7985069 ataaccac 7985062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 32585575 - 32585664
Alignment:
Q  76 tcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgc 165  Q
    |||||||||||||||||||||| || ||||||| |||||| ||||||||||| |||| | ||||| |||||||| ||||| ||| |||||    
T  32585575 tcatacccaaacccagtcaaaaaggggaaaaccggtcaaattgggtttggtttgggcggataaccgcgggtatgagttttgttgccatgc 32585664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 19534537 - 19534633
Alignment:
Q  72 aaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||||||||||||||||| | ||||||||||||||| |||||| ||| ||||||| || | ||||| ||||| ||| |||||| ||| ||||||||    
T  19534537 aaactcatacccaaacccaatgaaaacggagaaaacccgtcaaattggatttggtttggacaggtaatcacggatattggtttttttgccatgccta 19534633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 39086222 - 39086306
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggct 133  Q
    |||| ||||||||| |||||| |||||||||| ||||||||| ||||||||||||||| | |||||| || |||||||| |||||    
T  39086222 tgttgtgaaatcggagaaaactcaaactcatatccaaacccaatcaaaacggagaaaatccgtcaaattgagtttggtttgggct 39086306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 7334227 - 7334108
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||| ||||| |||||  |||||||||||||||||||| |||  |||||| |||||| | |||||||||| ||| | || || |  ||||    
T  7334227 tgttttgaaatcggggaaaatccaaatccatacccaaacccagtcaaagcgggaaaaacccgtcaaattaggtttggttcaggcggatacccgcaagtat 7334128  T
Q  149 gggttttattgtcatgccta 168  Q
    ||||||| ||| ||||||||    
T  7334127 gggttttgttgccatgccta 7334108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 11696872 - 11696942
Alignment:
Q  38 tctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaacc 108  Q
    |||||||||  |||||||||||||| ||||||| |||| ||||||||||||||||||| ||| ||||||||    
T  11696872 tctcataccggtgttttgaaatcggagaaaacctaaacccatacccaaacccagtcaacacgaagaaaacc 11696942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 12505571 - 12505505
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcataccc-aaacccagtcaaaacggagaaaaccagtcaa 114  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||| |||||    
T  12505571 tgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaagcggagaaaacccgtcaa 12505505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 10302131 - 10302208
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaacc 108  Q
    ||||||||||||||||  |  ||||||||||| ||||||| |||| |||||||||||||| ||||||||| |||||||    
T  10302131 ttacccgtctcatacccgtactttgaaatcggggaaaacctaaacccatacccaaacccaatcaaaacggggaaaacc 10302208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 165
Target Start/End: Complemental strand, 21956844 - 21956728
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||| |||||||  |||||||||||||||||||||| ||| | |||| ||  |||||| |||||| | | |||||||||||| |||| ||   |||||    
T  21956844 tgttttaaaatcggaaaaaacccaaactcatacccaaatccaattaaaatgggaaaaacctgtcaaatttgatttggttcgggcgggtacccgttggtat 21956745  T
Q  149 gggttttattgtcatgc 165  Q
    ||||||| |||||||||    
T  21956744 gggttttgttgtcatgc 21956728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 37107458 - 37107541
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    ||||||||| ||||||  ||||||||||| || |||||||||||||||||| ||||||||||||||| ||  |||||| ||||||    
T  37107458 ttacccgtcccatacccgtgttttgaaattgg-gaaaacccaaactcatacacaaacccagtcaaaatgggaaaaacccgtcaaa 37107541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 12075661 - 12075543
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||||||||| ||  ||||| |||||||||||||||||||  ||||| |||| |||||| |||||| || |||||  |||| | |||| ||||   |||    
T  12075661 tgttttgaaattggaaaaaactcaaactcatacccaaacccgatcaaagcgga-aaaacccgtcaaattgagtttgaatcggacaggtacccacatatat 12075563  T
Q  149 gggttttattgtcatgccta 168  Q
    ||||||||||||||||||||    
T  12075562 gggttttattgtcatgccta 12075543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 14605973 - 14605902
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggag 102  Q
    ||||||||||| ||||  | |||||||||||| |||||||||||| ||||||||||| |||||||| |||||    
T  14605973 ttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtcaaatcggag 14605902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 39047017 - 39047136
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||| ||||| || ||||||||| || ||||| ||||  ||||||||||||||||||||  ||||| |||||||| ||||| | |||||||  || |||    
T  39047017 tgtttggaaattggggaaaacccatacccatactcaaattcagtcaaaacggagaaaacccatcaaattgggtttgattcggacgggtaaccgtggatat 39047116  T
Q  149 gggttttattgtcatgccta 168  Q
     |||||| ||| ||||||||    
T  39047117 aggttttgttgccatgccta 39047136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 39375345 - 39375436
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccac 142  Q
    |||||||||||| ||||| ||||||||||| |||||| |||||||||  |  |||||| |||||| ||  |||||||||||| |||||||||    
T  39375345 ttttgaaatcggggaaaagccaaactcatatccaaactcagtcaaaataggaaaaacccgtcaaattgaatttggttcgggcgggtaaccac 39375436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 169
Target Start/End: Original strand, 30673028 - 30673146
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||| ||||||| ||||| ||||||||||||||||||||| ||||| | | ||||||| |||||| || | |||||| || | | || ||| ||  ||||    
T  30673028 ttttaaaatcggagaaaatccaaactcatacccaaacccaatcaaatcagggaaaacccgtcaaattgtggttggtttggacggatacccatggacatgg 30673127  T
Q  151 gttttattgtcatgcctac 169  Q
    ||||| |||||||||||||    
T  30673128 gttttgttgtcatgcctac 30673146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 1866597 - 1866460
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||| ||||  | ||||||||||||  |||||||| ||||||||||| ||| ||||||| ||| ||||| | ||||||  ||| |||||| ||    
T  1866597 ttacccgtctcgtacccgtattttgaaatcgggaaaaacccatactcatacccagacctagtcaaatcggggaaaatccgtcaaatcggggttggtttgg 1866498  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||  ||| ||||| | | ||||||| ||||| ||||||    
T  1866497 gcgagtacccacgtgcacgggttttgttgtcttgccta 1866460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 39188598 - 39188687
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    ||||||||||| ||||||| || ||||||  ||||| ||||||| |||||| |  ||||||||| ||||| ||||| |||||||||||||    
T  39188598 acccaaacccaatcaaaacagaaaaaacccatcaaattgggtttagttcggacaagtaaccacgtgtatgagttttgttgtcatgcctac 39188687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 42299853 - 42299934
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||||||||||| ||||| ||| || |||||| |||| |||||||| |||| |||||| |||||| || |||||||||||    
T  42299853 tgttttgaaatcggggaaaatccatacccatacctaaactcagtcaaaccggaaaaaacccgtcaaattgagtttggttcgg 42299934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 36919188 - 36919307
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||| || |||| |||||| |||||||||||||||||||||| ||| ||   |||||| |||||| || |||||||||||    ||| || || ||||    
T  36919188 tgttttaaagtcggggaaaactcaaactcatacccaaacccagttaaagcgagaaaaacccgtcaaattgagtttggttcggatgcgtacccgcgagtat 36919287  T
Q  149 gggttttattgtcatgccta 168  Q
    | ||||| ||||||||||||    
T  36919288 gagttttgttgtcatgccta 36919307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 31415959 - 31415902
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaacc 108  Q
    |||||||||||| ||||| ||||||| ||||| ||||||||||||| ||| |||||||    
T  31415959 ttttgaaatcggagaaaatccaaacttatacctaaacccagtcaaatcggggaaaacc 31415902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 45065316 - 45065433
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||||||||||  ||||||| ||||  |||||||||||||||||||  || ||||||  ||||||  ||| |||||| |||| |||| ||| ||| | ||    
T  45065316 ttttgaaatcgaggaaaacctaaacctatacccaaacccagtcaaattggggaaaactcgtcaaatcggggttggtttgggcgggtacccatgggcacgg 45065415  T
Q  151 gttttattgtcatgccta 168  Q
    ||||| ||| ||||||||    
T  45065416 gttttgttgccatgccta 45065433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 48459528 - 48459665
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||  ||||||  |||||||||||||| ||||||||| |  ||||| |||| ||| |||||| ||  ||||||  ||||| | |||||| |||||    
T  48459528 ttacccgttccatacccatgttttgaaatcggggaaaacccatatccatactcaaatccaatcaaaatgggaaaaacccatcaaatttggtttgattcgg 48459627  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     | ||||||| ||| ||||| |||| ||| ||||||||    
T  48459628 acgggtaaccgcggatatggattttgttgccatgccta 48459665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 1724358 - 1724307
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacc 82  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||| ||||||    
T  1724358 ttacccgtcccatacccatgttttgaaatcggggaaaacccaaacccatacc 1724307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 12825509 - 12825462
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactca 78  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||||||    
T  12825509 ttacccgtcccatacccgtgttttgaaatcggggaaaacccaaactca 12825462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 39665841 - 39665900
Alignment:
Q  36 cgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaa 95  Q
    |||||||||||| | ||| |||||||| |||||| |||| ||||||||||||| ||||||    
T  39665841 cgtctcatacctgtatttcgaaatcggagaaaactcaaattcatacccaaacctagtcaa 39665900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 25265194 - 25265129
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    |||||| ||||||| |||||||||| | ||||||||||| |||||||| |||| |||||| ||||||    
T  25265194 tgttttaaaatcggggaaaacccaagc-catacccaaacgcagtcaaagcggaaaaaacccgtcaaa 25265129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 43553498 - 43553584
Alignment:
Q  36 cgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtt 122  Q
    |||| ||||||  |||||||||||||   |||| | |||  ||||||||||| |||||||| ||||||||||| |||||| ||||||    
T  43553498 cgtcccatacccgtgttttgaaatcgaaaaaaatcgaaatgcatacccaaactcagtcaaagcggagaaaacccgtcaaattgggtt 43553584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 56252289 - 56252221
Alignment:
Q  171 gagcattctcaaagcatgatcaaaacagattaaccctagtctaataaatcgtactttatgcaagtacaa 239  Q
    |||||||||||| |||||  | |||||||||||||||| | | ||||||||||||   |||||||||||    
T  56252289 gagcattctcaaggcatgccctaaacagattaaccctaatatgataaatcgtactcactgcaagtacaa 56252221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 4920867 - 4921004
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  4920867 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgg 4920966  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||||||||| ||| ||||||||    
T  4920967 gcgggtaaccacgggtatgggttttgttgccatgccta 4921004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 10127116 - 10127253
Alignment:
Q  32 tacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcggg 131  Q
    |||||||| ||||||  |||||||| ||||| ||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||    
T  10127116 tacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcggg 10127215  T
Q  132 ctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    | | ||||||||||||||| |||| |||||||||||||    
T  10127216 cggataaccacgggtatggattttgttgtcatgcctac 10127253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 33728049 - 33727911
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||| ||| || |||| ||||||||| ||||||||| ||||| | |||||| ||||||||||||||    
T  33728049 ttacccgtcccatacccgtgttttgagatcggggaaaatccatacccatatccaaacccaatcaaaacggggaaaatccgtcaaattgggtttggttcgg 33727950  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || |||||||||||||||||||||| ||| |||||||||    
T  33727949 gcgggtaaccacgggtatgggttttgttgccatgcctac 33727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 15890247 - 15890384
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| || |||| ||||||| |||||||||||  |||||| |||||| ||| ||||||||||    
T  15890247 ttacccgtcccatacccgtgttttgaaatcggagaaaacccatacacatagccaaacctagtcaaaacgggaaaaacccgtcaaattggatttggttcgg 15890346  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||| || ||||||||||| ||||||||||||    
T  15890347 gcgggtaaccgcgagtatgggttttgttgtcatgccta 15890384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 169
Target Start/End: Complemental strand, 29245994 - 29245861
Alignment:
Q  36 cgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctgg 135  Q
    |||| ||||||  |||||||||||||| |||||| || || |||||||||||| ||||||||||| ||||||| |||||| || ||||||||||||| ||    
T  29245994 cgtcccatacccgtgttttgaaatcggagaaaactcatacccatacccaaacctagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcggg 29245895  T
Q  136 taaccacgggtatgggttttattgtcatgcctac 169  Q
    ||||| |||||||||||||| |||||||| ||||    
T  29245894 taaccgcgggtatgggttttgttgtcatgtctac 29245861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 20973544 - 20973410
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||| || ||||||  |||||  ||||||| ||||||||| || |||| ||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  20973544 ttacccatcccatacccgtgtttgaaaatcggggaaaacccatacccataaccaaacccagtcaaaacggggaaaacccgtcagaatgggtttggttcgg 20973445  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgc 165  Q
    || ||||||| |||||||||||||| ||| |||||    
T  20973444 gcgggtaaccgcgggtatgggttttgttgccatgc 20973410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 4583160 - 4583297
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| || |||| ||||||||| ||||||||| ||||||| |||||| ||||||||||||||    
T  4583160 ttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgg 4583259  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||  || |||| ||||| ||| ||||||||    
T  4583260 gcgggtaaccgtggatatgagttttgttgccatgccta 4583297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 5908736 - 5908597
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||||| |||||| || || |||||||||||||| |||||| || ||||||| |||||| ||||||||||||||    
T  5908736 ttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaatggggaaaacccgtcaaattgggtttggttcgg 5908637  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctacc 170  Q
    || | ||||||||||||||| |||| ||| ||||||||||    
T  5908636 gcggataaccacgggtatggattttgttgccatgcctacc 5908597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 18207078 - 18207196
Alignment:
Q  50 gttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatg 149  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||||||||  |||||  |||||| ||||||||||| |||  ||||||||||||||||    
T  18207078 gttttgaaatcgaggaaaacccaaactcatgcccaaacccagtcaaaacgggaaaaacacgtcaaattgggtttggtttgggtgggtaaccacgggtatg 18207177  T
Q  150 ggttttattgtcatgccta 168  Q
     ||||| ||| ||||||||    
T  18207178 agttttgttgccatgccta 18207196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 12866599 - 12866475
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| |||||| || || ||||||||||||||||||||| || ||||||| |||||| ||| ||||||||||    
T  12866599 ttacccgtcccatacccatgttttgaaatcggagaaaactcatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattggatttggttcgg 12866500  T
Q  131 gctggtaaccacgggtatgggtttt 155  Q
     | |||||||||  |||||||||||    
T  12866499 acgggtaaccacatgtatgggtttt 12866475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 13402052 - 13401915
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||  ||||||  |||||  |||||||  ||||| || || |||||||||||| |||||||||||| |||| | |||||| ||||||||||||||    
T  13402052 ttacccgttccatacccgtgtttgaaaatcgggaaaaactcatacccatacccaaacctagtcaaaacggaaaaaatccgtcaaattgggtttggttcgg 13401953  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||| |||||||||||||| ||| ||||||||    
T  13401952 gcgggtaaccgcgggtatgggttttgttgccatgccta 13401915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 40517847 - 40517984
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||| || ||||||  |||||||  ||||| ||||||||| || ||||||||||||||||||||||||  |||| | |||||| ||  |||||||| |    
T  40517847 ttacccatcccatacccgtgttttgggatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaatccgtcaaattgaatttggttcag 40517946  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||||||||| ||| ||||||||    
T  40517947 gcgggtaaccacgggtatgggttttgttgccatgccta 40517984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 12834622 - 12834498
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| |||| |  ||||||||||| || ||||||||| || ||||||||||||||||||||| || ||||||| |||||| || |||||||||||    
T  12834622 ttacccgtcccatatccatgttttgaaattggagaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgagtttggttcgg 12834523  T
Q  131 gctggtaaccacgggtatgggtttt 155  Q
     | |||||||||  |||||||||||    
T  12834522 acgggtaaccacatgtatgggtttt 12834498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 35311900 - 35311991
Alignment:
Q  77 catacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||||||||| ||||||||||||| |||| | |||||| |||||||||||||||| ||||||| ||| |||| ||||||||||||||||||    
T  35311900 catacccaaactcagtcaaaacggaaaaaatccgtcaaattgggtttggttcgggcgggtaaccgcggatatgagttttattgtcatgccta 35311991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 38972981 - 38973059
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggtt 127  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||||    
T  38972981 tgttttgaaatcgggaaaaacccaaactcatacctaaacccagtcaaaacggggaaaacctgtcaaaatgagtttggtt 38973059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 17853340 - 17853204
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| |||||||| ||||||||| |  |||||||||||||| ||||||||| ||||||| |||||| | |||||||||| |    
T  17853340 ttacccgtcccatacccgtgttt-gaaatcggggaaaacccatatccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcag 17853242  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |  ||||||| |||||||| ||||| ||| ||||||||    
T  17853241 gtgggtaaccgcgggtatgcgttttgttgccatgccta 17853204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 3564768 - 3564655
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||| ||||| ||| || |||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||| || |||| || ||||    
T  3564768 tgttttgaaatcggagaaaatccatacccatacccaaacccagtcaaaacgg-gaaaacccgtcaaattggatttggttcgggc-gggaaccgcgagtat 3564671  T
Q  149 gggttttattgtcatg 164  Q
    || |||| ||||||||    
T  3564670 ggattttgttgtcatg 3564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 6155950 - 6155831
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||| || ||| | | |||||| ||||  | ||||| | |||||    
T  6155950 tgttttgaaatcggggaaaacccaaacacatacccaaacccagtcaaaacgaagaaaacccgttaaatttgatttggtacgggtggataaccgcaggtat 6155851  T
Q  149 gggttttattgtcatgccta 168  Q
    | ||||| ||| ||||||||    
T  6155850 gagttttgttgccatgccta 6155831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 30996655 - 30996773
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||||| | |||||| |||||||||||||| | | |||||   | |||    
T  30996655 tgttttaaaatcggagaaaacccatactcatacccaaacccagtcaaaacgg-gaaaatccgtcaaattgggtttggttcggacggataaccgtagatat 30996753  T
Q  149 gggttttattgtcatgccta 168  Q
    ||||||| ||| ||||||||    
T  30996754 gggttttgttgccatgccta 30996773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 22694915 - 22694817
Alignment:
Q  66 aaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatg 164  Q
    ||||||| || |||||||||||||||| |||||||  |||  | |||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  22694915 aaacccatacccatacccaaacccagttaaaacgggaaaattccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 22694817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 12447459 - 12447546
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||||||||||||| || |||| || |||||| |||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  12447459 acccaaacccagtcaaaatggggaaatcc-gtcaaattgggtttggttcgggtgggtaaccacgggtatgggttttgttgccatgccta 12447546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 40187705 - 40187581
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||||||||  |||  ||||||||||| || ||||||||||||||||  ||||||||||||||| ||  ||||||| ||||||||| |||||||||||    
T  40187705 ttacccgtctcgcacccgtgttttgaaattggggaaaacccaaactcatttccaaacccagtcaaagcgaggaaaacccgtcaaaatgagtttggttcgg 40187606  T
Q  131 gctggtaaccacgggtatgggtttt 155  Q
     | |||| || | |||||| |||||    
T  40187605 acgggtacccgcaggtatgagtttt 40187581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 6092559 - 6092445
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||| |||||  |||||||| || |||||||||||||| ||||||||| ||||||| || ||| ||  |||||||||||| |||||||  ||||||    
T  6092559 tgttttgagatcgggaaaaacccatacccatacccaaacccaatcaaaacggggaaaacccgttaaattgaatttggttcgggcgggtaacctagggtat 6092460  T
Q  149 gggttttattgtcat 163  Q
    | ||||| |||||||    
T  6092459 gagttttgttgtcat 6092445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 42717643 - 42717554
Alignment:
Q  66 aaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggtttt 155  Q
    ||||||| || |||||||||| |||||||||||||  |||||| |||||| |||||||||||||| | ||||||||| |||||| |||||    
T  42717643 aaacccatacccatacccaaatccagtcaaaacgggaaaaacccgtcaaattgggtttggttcggacgggtaaccacaggtatgagtttt 42717554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 1218812 - 1218899
Alignment:
Q  77 catacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatg 164  Q
    ||||||||||||||||||||| ||| |||||  |||||| ||| ||||||||| || ||||||| |||||||||||||| ||| ||||    
T  1218812 catacccaaacccagtcaaaatggaaaaaactcgtcaaattggatttggttcgagcgggtaaccgcgggtatgggttttgttgccatg 1218899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 2681277 - 2681394
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||| ||| ||||||| |||||| || | |||||| || | |||| ||| ||| | |     
T  2681277 ttttgaaatcggggaaaacccaaactcatgcccaaactcagtcaaatcggggaaaacccgtcaaattgaggttggtttggacgggtacccatgggcacga 2681376  T
Q  151 gttttattgtcatgccta 168  Q
    ||||| ||| ||||||||    
T  2681377 gttttgttgccatgccta 2681394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 28569049 - 28568985
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| | | ||||||| ||||||    
T  28569049 ttttgaaatcggggaaaatccaaactcatacccaaacccagtcaaatcagggaaaacccgtcaaa 28568985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 39422405 - 39422505
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||   |||||||||||||||| ||||||||| ||||| ||| ||||||| |||||  ||||| |||||||||| | || |||| |||||    
T  39422405 tgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtggttcgggcggttacccacaggtat 39422504  T
Q  149 g 149  Q
    |    
T  39422505 g 39422505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 16311323 - 16311204
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||||||||||||  ||||| |||||||||| ||||||||| ||||| |||  |||| | |||||| | |||||||||| ||| |||| || ||| |||    
T  16311323 tgttttgaaatcggaaaaaactcaaactcatatccaaacccaatcaaagcgggaaaaaaccgtcaaattaggtttggttcaggcgggtacccgcggatat 16311224  T
Q  149 gggttttattgtcatgccta 168  Q
    | ||||| |||| |||||||    
T  16311223 gagttttgttgttatgccta 16311204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 18116545 - 18116500
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||    
T  18116545 ttttgaaatcggagaaaacccaaactcatacccaaactcagtcaaa 18116500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 27088386 - 27088284
Alignment:
Q  64 gaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcat 163  Q
    ||||||| |||| |||||||||||| ||| ||||||| |||| |  ||||||||| ||||||||||||  | ||| ||||||||||| |||| ||| |||    
T  27088386 gaaaacctaaacacatacccaaacctagttaaaacggggaaacc--gtcaaaatgagtttggttcgggtggataatcacgggtatggattttgttgccat 27088289  T
Q  164 gccta 168  Q
    |||||    
T  27088288 gccta 27088284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 38006480 - 38006391
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |||||||||||||||||| |||||||||| ||||||  || ||||||| |||| |||||| || ||||| |||||| ||| |||| ||||    
T  38006480 acccaaacccagtcaaaatggagaaaacccgtcaaatcggatttggttagggcgggtaacaacaggtataggttttgttgccatgactac 38006391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 43523809 - 43523854
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||    
T  43523809 ttttgaaatcggggaaaacccaaactcatacccaaactcagtcaaa 43523854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 18451910 - 18451834
Alignment:
Q  92 tcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||| ||| ||||||| |||||| |||||||||||||| | || | ||||| ||||||||||| ||||||||||||    
T  18451910 tcaaatcggggaaaacccgtcaaactgggtttggttcggacgggaacccacgtgtatgggttttgttgtcatgccta 18451834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 24207736 - 24207857
Alignment:
Q  42 atacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaacca 141  Q
    |||||| |||||||||||||| |||||| ||||| ||||||||||| || ||||| ||| |||||   |||||| |  ||||||||||||  |||| ||     
T  24207736 atacctgtgttttgaaatcggggaaaactcaaacccatacccaaactcaatcaaagcgg-gaaaaatcgtcaaacttagtttggttcgggtgggtacccg 24207834  T
Q  142 cgggtatgggttttattgtcatg 164  Q
    ||||||||| |||| ||| ||||    
T  24207835 cgggtatggattttgttgccatg 24207857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 32574968 - 32574887
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaaccca-gtcaaaacggagaaaaccagtcaaaatgggtttggttcg 129  Q
    |||||||||||||| ||||||||||||   | |||||||||| |||||| |||  |||||| |||||||||| |||||||||    
T  32574968 tgttttgaaatcggggaaaacccaaacctgtccccaaacccaggtcaaagcgggaaaaacctgtcaaaatggatttggttcg 32574887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 23045019 - 23044933
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggta 137  Q
    |||||||||||| ||||||| |||| ||||||||||| ||||||||  ||  |||||| ||||||  ||| |||||| |||| ||||    
T  23045019 ttttgaaatcggggaaaacctaaacccatacccaaactcagtcaaattgggaaaaacccgtcaaatcggggttggtttgggcgggta 23044933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 33420361 - 33420279
Alignment:
Q  65 aaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggta 147  Q
    |||| |||||||||||| |||||||| |||||| ||  || ||| |||||||| ||||||||||||   | ||||||||||||    
T  33420361 aaaatccaaactcatactcaaacccaatcaaaatgggaaatacccgtcaaaataggtttggttcggatggataaccacgggta 33420279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 42987527 - 42987390
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||| |||| ||||||  |||||||| ||||| ||||| ||| || | ||||||||| ||||||||||||  |||||| | |||| ||  ||||||||||    
T  42987527 ttacacgtcccatacccgtgttttgagatcggggaaaatccatacccgtacccaaactcagtcaaaacgggaaaaacccgccaaattgaatttggttcgg 42987428  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
     | ||  ||||||  |||||||||| ||| |||||||||    
T  42987427 ac-ggataccacgaatatgggttttgttgccatgcctac 42987390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 6810236 - 6810321
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgc 165  Q
    |||||||| || ||||| |||| |||| | |||||| || ||||||||||| | |||| |||||| |||||||||| ||| |||||    
T  6810236 acccaaactcattcaaagcggaaaaaatccgtcaaattgagtttggttcggacgggtatccacggatatgggttttgttgccatgc 6810321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 28278651 - 28278687
Alignment:
Q  70 ccaaactcatacccaaacccagtcaaaacggagaaaa 106  Q
    |||||||||||||||||| |||||||||||| |||||    
T  28278651 ccaaactcatacccaaactcagtcaaaacggggaaaa 28278687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 5863430 - 5863306
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  5863430 ttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 5863331  T
Q  131 gctggtaaccacgggtatgggtttt 155  Q
    || ||||||||||||||||||||||    
T  5863330 gcaggtaaccacgggtatgggtttt 5863306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 10188126 - 10187991
Alignment:
Q  32 tacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcggg 131  Q
    |||||||| ||||||  |||||||| ||||| ||||||||| || |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||    
T  10188126 tacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcggg 10188027  T
Q  132 ctggtaaccacgggtatgggttttattgtcatgcct 167  Q
    | |||||||||||||||||||||| ||| |||||||    
T  10188026 cgggtaaccacgggtatgggttttgttgccatgcct 10187991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 30986294 - 30986431
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || ||||||||||| |||||||||||| ||||||| |||||| || |||||||||||    
T  30986294 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgagtttggttcgg 30986393  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||||||||| ||| ||||||||    
T  30986394 gcgggtaaccacgggtatgggttttgttgccatgccta 30986431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 32853885 - 32854018
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  32853885 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgg 32853984  T
Q  131 gctggtaaccacgggtatgggttttattgtcatg 164  Q
     | | |||||||||||||||||||| ||| ||||    
T  32853985 tcggataaccacgggtatgggttttgttgccatg 32854018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 3483970 - 3483832
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||| || ||||||  ||||| || ||||| ||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  3483970 ttacccatcccatacccgtgtttcgagatcggggaaaacccatacacatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 3483871  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || |||||||| | ||||||||||| ||| |||||||||    
T  3483870 gcgggtaaccatgagtatgggttttgttgccatgcctac 3483832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 12678142 - 12678004
Alignment:
Q  30 tttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcg 129  Q
    |||||||||| ||||||| ||| |||||||||| |||||| |||||||||||||||||||||||||||||| ||||||| ||| | || ||||||||||     
T  12678142 tttacccgtcccatacctgtgtcttgaaatcggggaaaacgcaaactcatacccaaacccagtcaaaacggcgaaaacctgtcgagataggtttggttca 12678043  T
Q  130 ggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||  ||||||||||| |||||| |||  || ||||||||    
T  12678042 ggtgggtaaccacggttatgggatttgctgccatgccta 12678004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 2367367 - 2367504
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || |||||||||||| |||||||||||  ||||||  ||||| ||||||||||||||    
T  2367367 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacctagtcaaaacgggaaaaacccatcaaattgggtttggttcgg 2367466  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     | ||||||||||| |||||||||| ||| ||||||||    
T  2367467 acgggtaaccacggatatgggttttgttgccatgccta 2367504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 31496478 - 31496612
Alignment:
Q  34 cccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggct 133  Q
    |||||| ||||||  ||||| || ||||| |||||| || || |||||||||||||||||||||||| ||||||| |||||| || |||||||| || |     
T  31496478 cccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacg 31496577  T
Q  134 ggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||||||||||||||||| ||| ||||||||    
T  31496578 ggtaaccacgggtatgggttttgttgccatgccta 31496612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 31501864 - 31501998
Alignment:
Q  34 cccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggct 133  Q
    |||||| ||||||  ||||| || ||||| |||||| || || |||||||||||||||||||||||| ||||||| |||||| || |||||||| || |     
T  31501864 cccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacg 31501963  T
Q  134 ggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||||||||||||||||| ||| ||||||||    
T  31501964 ggtaaccacgggtatgggttttgttgccatgccta 31501998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 27534725 - 27534862
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||||| |||||| || || |||||||||||||| ||||||||| ||||||| |||||| || |||||||||||    
T  27534725 ttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgagtttggttcgg 27534824  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     | | |||||||||||||||||||| ||| ||||||||    
T  27534825 acggttaaccacgggtatgggttttgttgccatgccta 27534862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 28079743 - 28079605
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| | ||||  |||||||||||||| |||||||||||| ||||||||||| ||| |||| |||  || ||| |||||||||||||||||  ||    
T  28079743 ttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaactcagccaaagcgggaaatacccgtcaaaatgggtttggtatgg 28079644  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |  |||| || |||||||||||||| |||||||||||||    
T  28079643 gtgggtacccgcgggtatgggttttgttgtcatgcctac 28079605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 12141444 - 12141563
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||| || || ||||||||| || | |||||||||||||||||||||| ||||||| |||||| ||  |||||||||||| ||||||||  |||||    
T  12141444 tgttttgagattggggaaaacccatacccgtacccaaacccagtcaaaacggggaaaacccgtcaaattgaatttggttcgggcgggtaaccataggtat 12141543  T
Q  149 gggttttattgtcatgccta 168  Q
    ||||||| ||| ||||||||    
T  12141544 gggttttgttgccatgccta 12141563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 15498365 - 15498466
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||| ||||||||||  |||||||||||||| ||||||||| |  |||||||||||||| ||||||||||||||||| || ||| |||||||| |||||    
T  15498365 ttacctgtctcatacccgtgttttgaaatcggggaaaacccatatccatacccaaacccattcaaaacggagaaaacccgttaaattgggtttgattcgg 15498464  T
Q  131 gc 132  Q
    ||    
T  15498465 gc 15498466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 20349105 - 20349242
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||| |||| ||||||  |||||||||||||| ||||| ||||||||||||| |||| || | ||| |||| ||    ||||||| ||||||||||||||    
T  20349105 ttactcgtcccatacccgtgttttgaaatcggggaaaatccaaactcataccaaaactcaataaaagcggaaaattatagtcaaattgggtttggttcgg 20349204  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||| |||| |||||| ||||||||||||||||||    
T  20349205 gcaggtagccacaggtatgagttttattgtcatgccta 20349242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 27738813 - 27738950
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| || |||||| |||||||||||||||||  ||||||  ||||| ||  ||||||||||    
T  27738813 ttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacctaaacccagtcaaaacgggaaaaacccatcaaattgaatttggttcgg 27738912  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||| || ||||||| ||| ||| ||| ||||    
T  27738913 gcaggtaaccgcgagtatggggtttgttgacatcccta 27738950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 32532581 - 32532718
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| |||||||| |||||||| | |||||||| |||||| |||||| ||| |||| || ||    
T  32532581 ttacccgtcccatacccgtgttttgaaatcggggaaaacccatactcatactcaaacccaatgaaaacggaaaaaacccgtcaaattggatttgatttgg 32532680  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || | ||||| | | ||||| |||| ||||||||||||    
T  32532681 gcggataaccgcagatatggattttgttgtcatgccta 32532718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 10142545 - 10142427
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||||| ||||| ||||||||| || |||||||||||||||||||||||  ||||||| | |||| || |||||||||| || | |||||||  ||||||    
T  10142545 ttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacgaggaaaacccgccaaattgagtttggttcgagcggataaccacaagtatgg 10142446  T
Q  151 gttttattgtcatgcctac 169  Q
    ||||| ||| |||||||||    
T  10142445 gttttgttgccatgcctac 10142427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 12309668 - 12309756
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||||||||||||| || ||||||  |||||| ||||| |||||||||| ||||||| |||||||||| ||| ||||||||||||    
T  12309668 acccaaacccagtcaaaatggggaaaactcgtcaaattgggtctggttcgggcgggtaaccgcgggtatggggtttgttgtcatgccta 12309756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 14255019 - 14255135
Alignment:
Q  52 tttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatggg 151  Q
    ||||||||| | |||||| ||||| |||||||||||||||||||||||  ||||| | ||||||||||||||| |||| |  |||||||||| ||||||     
T  14255019 tttgaaatcagagaaaactcaaacccatacccaaacccagtcaaaacgaggaaaatctgtcaaaatgggtttgattcgagtgggtaaccacgagtatgga 14255118  T
Q  152 ttttattgtcatgccta 168  Q
    |||| ||  ||||||||    
T  14255119 ttttgttagcatgccta 14255135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 29341297 - 29341435
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||||| ||  |||||  |||||||  |||||||||||||||| ||||||||| ||||||||||||||||   ||||| || ||||| ||||     
T  29341297 ttacccgtctcatgcccatgtttgaaaatcgggaaaaacccaaactcatatccaaacccaatcaaaacggagaaaactcatcaaattgagtttgattcga 29341396  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    ||  ||| || ||| |||||||||| ||| |||||||||    
T  29341397 gcgagtacccgcggatatgggttttgttgccatgcctac 29341435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 14034583 - 14034668
Alignment:
Q  83 caaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||||||||||||||||  ||||||  ||||||||||||| |||||||  ||||||||||| |||||||||| ||| ||||||||    
T  14034583 caaacccagtcaaaacgggtaaaacccatcaaaatgggtttagttcgggtgggtaaccacggttatgggttttgttgccatgccta 14034668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 9442471 - 9442570
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||||||||||||  ||| |||| || |||||||||||| ||||||||||| ||||||| |||||| || |||||||||||    
T  9442471 ttacccgtcccatacccgtgttttgaaatcgggaaaatcccatacccatacccaaacc-agtcaaaacggggaaaacccgtcaaattgagtttggttcgg 9442569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 14506164 - 14506252
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||||||||||||| || ||||||| |||||| || |||| ||||||   | |||||||||||||| ||||||||||||||||||    
T  14506164 acccaaacccagtcaaaatggggaaaacccgtcaaattgagtttcgttcggatggttaaccacgggtatgagttttattgtcatgccta 14506252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 24225794 - 24225882
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||||||||| ||||||||| ||||||| |||||| ||  |||||||||| | |||||||| ||||||| ||||| ||||||||||||    
T  24225794 acccaaacccaatcaaaacggggaaaacctgtcaaattgaatttggttcggacgggtaaccatgggtatgagttttgttgtcatgccta 24225882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 24602866 - 24602777
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    ||||||||||||||||||| | ||||| | |||||| || |||| |||||||  |||||||||| |||||| |||| |||||||||||||    
T  24602866 acccaaacccagtcaaaacagggaaaaaccgtcaaattgagtttcgttcgggtgggtaaccacgtgtatggattttgttgtcatgcctac 24602777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 32053129 - 32053218
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggt 126  Q
    ||||||||| |||| |  |||||||||||||| |||||||||      |||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  32053129 ttacccgtcccatatccatgttttgaaatcggggaaaaccca------tacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 32053218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 34178341 - 34178245
Alignment:
Q  72 aaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||| ||||||||||||| |||||||||| ||| |||  ||||| ||||| |||||| ||| |||| || |||||||| ||||||||| ||||||||    
T  34178341 aaacccatacccaaaccctgtcaaaacggggaacacccatcaaattgggtatggttcaggcgggtacccgcgggtatgagttttattgccatgccta 34178245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 256539 - 256483
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaac 87  Q
    ||||||||||| ||||  |||||||||||||| |||||| |||||||||||||||||    
T  256539 ttacccgtctcgtacccatgttttgaaatcggggaaaactcaaactcatacccaaac 256483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 1947810 - 1947746
Alignment:
Q  60 cggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttg 124  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||| | |||||| || |||||    
T  1947810 cggtgaaaacccaaactcattcccgaacccagtcaaaacgaagaaaatccgtcaaattgagtttg 1947746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 13769113 - 13769209
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggtt 127  Q
    ||||||||| ||||||  ||||||||| |||| ||||||| |||| |||||| ||||||||||||| ||   |||||| || ||| |||||||||||    
T  13769113 ttacccgtcccatacccatgttttgaagtcggggaaaaccgaaacccatacctaaacccagtcaaagcgagtaaaacccgtgaaattgggtttggtt 13769209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 11762486 - 11762596
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| |||||| |||||| ||||||||  |||||| |||  |||| ||||||||||| |||| || ||||||| |||||| ||| ||  ||||||    
T  11762486 ttacccgtcccatacccttgtttagaaatcgggaaaaacctaaatccatatccaaacccagtaaaaatggggaaaacccgtcaaattggattgtgttcgg 11762585  T
Q  131 gctggtaacca 141  Q
    ||  |||||||    
T  11762586 gcgagtaacca 11762596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 9458724 - 9458788
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    ||||||||| || |||| | |||||||||||||||||||||||||| ||| ||||| | ||||||    
T  9458724 ttttgaaattggggaaatctcaaactcatacccaaacccagtcaaatcggggaaaatccgtcaaa 9458788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 9977624 - 9977691
Alignment:
Q  171 gagcattctcaaagcatgatcaaaacagattaaccctagtctaataaatcgtactttatgcaagtaca 238  Q
    |||||||||||| |||||| | ||| ||||||||| |||||| ||||||||||||   ||||||||||    
T  9977624 gagcattctcaaggcatgacctaaatagattaaccatagtctcataaatcgtactcactgcaagtaca 9977691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 18908954 - 18908997
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtca 94  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||    
T  18908954 ttttgaaatcggggaaaacccaaactcatactcaaactcagtca 18908997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 30816332 - 30816398
Alignment:
Q  64 gaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||| ||||| |||| ||||||||| ||||||||| ||||| |  ||||| ||||||||||||||    
T  30816332 gaaaactcaaacccatatccaaacccaatcaaaacggggaaaatccatcaaattgggtttggttcgg 30816398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 30624481 - 30624526
Alignment:
Q  56 aaatcggtgaaaacccaaactcatacccaaacccagtcaaaacgga 101  Q
    ||||||| |||||||||||| || ||||||||||||||||| ||||    
T  30624481 aaatcggggaaaacccaaacccaaacccaaacccagtcaaagcgga 30624526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 9402666 - 9402754
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||||| ||||||||| ||| ||||| |  ||||| |||||||||||||||| |||| ||  ||||||| || || || |||||||||    
T  9402666 acccaaatccagtcaaagcggggaaaatccatcaaattgggtttggttcgggcgggtacccgtgggtatgagtattgttatcatgccta 9402754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 9458924 - 9458964
Alignment:
Q  56 aaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    ||||||| ||||||||| || ||||||||||||||||||||    
T  9458924 aaatcggggaaaacccagacccatacccaaacccagtcaaa 9458964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 19367045 - 19367125
Alignment:
Q  26 tcattttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaa 106  Q
    |||| ||||||||||||||||  |||||| |||| || ||||| ||| || |||| |||||| |||||||| |||| ||||    
T  19367045 tcatgttacccgtctcatacccgtgttttaaaattggggaaaatccatacccatatccaaactcagtcaaagcggaaaaaa 19367125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 20611009 - 20610945
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    |||||||||||| |||| ||||||| |||||| ||||||||| ||| |||  |||||| ||||||    
T  20611009 ttttgaaatcggggaaaccccaaacccatacctaaacccagttaaatcgggaaaaacccgtcaaa 20610945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 9e-39; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 20399633 - 20399770
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||  |||||| |||||||||||||     
T  20399633 ttacccgtcccatacccgtgttttgaaatcggagaaaacccaaacccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtttggttcga 20399732  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||||||||||| |||||| ||| ||||||||    
T  20399733 gcgggtaaccacgggtattggttttgttgccatgccta 20399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 32303102 - 32303240
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||||| ||||||||| || |||||||||||||||||||||||| ||||||| |||||| |||||||| |||||    
T  32303102 ttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttgtttcgg 32303201  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || |||||||||||||||||||||| ||| |||||||||    
T  32303202 gcgggtaaccacgggtatgggttttgttgccatgcctac 32303240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 24927990 - 24928127
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||||||||  ||||| || ||| | ||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  24927990 ttacccgtctcatacccgtgtttcgagatcagggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 24928089  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||| |||||||||||||| ||| ||||||||    
T  24928090 gcgggtaaccgcgggtatgggttttgttgccatgccta 24928127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 27932454 - 27932592
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||| |||| ||||||  |||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  27932454 ttactcgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 27932553  T
Q  131 gctggtaa-ccacgggtatgggttttattgtcatgccta 168  Q
    || ||||| || |||||||| ||||| ||||||||||||    
T  27932554 gcgggtaacccgcgggtatgagttttgttgtcatgccta 27932592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 35215577 - 35215713
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||||||||  |||||||||||||| ||||||||||| |||||||||||||| ||||||||||  |||||| |||||| ||||||||| ||||    
T  35215577 ttacccgtctcatacccgtgttttgaaatcgg-gaaaacccaaaatcatacccaaacccggtcaaaacgggaaaaaccggtcaaattgggtttgggtcgg 35215675  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     | ||||||||||| |||||||||| |||  |||||||    
T  35215676 acgggtaaccacggatatgggttttgttgctatgccta 35215713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 1012660 - 1012796
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| |||||   |||||| ||||||| |||||||||||||||||||||||| || ||||||||  ||||||| |||||| |||||||| |||||    
T  1012660 ttacccgtcccatactcatgtttt-aaatcggggaaaacccaaactcatacccaaactcaatcaaaacgaggaaaacccgtcaaattgggtttgattcgg 1012758  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |  ||||||||||||||||| |||||||| ||||||||    
T  1012759 gtgggtaaccacgggtatggattttattgccatgccta 1012796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 168
Target Start/End: Complemental strand, 40248414 - 40248281
Alignment:
Q  35 ccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctg 134  Q
    ||||||||||||  |||||||||||||| ||||||  | || ||||||||||||||||||||||||  |||||| |||||| |||||||||||| |||      
T  40248414 ccgtctcatacccgtgttttgaaatcggggaaaacatatacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggtttggttcaggcga 40248315  T
Q  135 gtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||| |||||||||||||| ||||||| ||||    
T  40248314 gtaaccgcgggtatgggttttgttgtcataccta 40248281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 43113673 - 43113536
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||| ||  ||||||||||||||  ||||||||| ||||||| |||||||||||||| | | ||||||| || ||| ||||||||||||||    
T  43113673 ttacccgtcccatgcccgtgttttgaaatcgggaaaaacccaatctcatacgcaaacccagtcaaagcagggaaaacccgttaaattgggtttggttcgg 43113574  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |  |||||||||||||||| ||||||||| ||||||||    
T  43113573 gtgggtaaccacgggtatgagttttattgccatgccta 43113536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 4230777 - 4230653
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||| |||| ||||||| |||||||| ||||| ||||||||| || ||||||||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  4230777 ttactcgtcccatacctgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgg 4230678  T
Q  131 gctggtaaccacgggtatgggtttt 155  Q
    || |||||||||  |||||| ||||    
T  4230677 gcgggtaaccacatgtatggatttt 4230653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 2075863 - 2075744
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||| |||||  |||||||| || |||||||||||||||||||||||||||||| | |||||| |||||||||||| ||| ||||||||||| |||    
T  2075863 tgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaatccgtcaaattgggtttggttcaggcgggtaaccacggatat 2075764  T
Q  149 gggttttattgtcatgccta 168  Q
    | ||||| ||| ||||||||    
T  2075763 gagttttgttgccatgccta 2075744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 5858699 - 5858566
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||| |||||||  ||||||||||| |||||||||||||| ||||||||| ||||||| |||||| ||| ||||||||||    
T  5858699 ttacccgtcccatacccgtgtttttaaatcgggaaaaacccaaacccatacccaaacccaatcaaaacggggaaaacccgtcaaattggatttggttcgg 5858600  T
Q  131 gctggtaaccacgggtatgggttttattgtcatg 164  Q
    |  ||||||||| ||||||| |||| ||| ||||    
T  5858599 gtaggtaaccacaggtatggattttgttgccatg 5858566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 27777233 - 27777108
Alignment:
Q  43 tacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccac 142  Q
    ||||| ||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||||||| |||||| |  |||||||||||   |||| |  |    
T  27777233 tacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaaacggagaaaacccgtcaaattaagtttggttcggataggtacctgc 27777134  T
Q  143 gggtatgggttttattgtcatgccta 168  Q
    ||||||| ||||| ||||||||||||    
T  27777133 gggtatgagttttgttgtcatgccta 27777108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 29108869 - 29108745
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||| |||||||  |||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  29108869 ttacccgtcccatacccatgttttaaaatcgggaaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 29108770  T
Q  131 gctggtaaccacgggtatgggtttt 155  Q
     |  |||||| | | ||||||||||    
T  29108769 acgagtaaccgcagttatgggtttt 29108745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 37961009 - 37960871
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||| ||| ||||||  |||||| ||||||| ||||||||||||||||||||||||| |||||||||||  ||||||  ||||| | |||| |||||||    
T  37961009 ttacctgtcccatacccgtgtttttaaatcggggaaaacccaaactcatacccaaacctagtcaaaacgggaaaaacccatcaaattaggttcggttcgg 37960910  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |  |||||| |||| |||| |||||  ||||||||||||    
T  37960909 gtgggtaactacggatatgagttttgatgtcatgcctac 37960871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 14155573 - 14155670
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttc 128  Q
    |||||| ||| |||||  ||||||||||||||  |||||||||||||||||||||||||||||| | ||| ||||||| |||||| ||||||||||||    
T  14155573 ttacccatcttatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgtcaaattgggtttggttc 14155670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 1063603 - 1063691
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||| ||||||||||||||| ||||||| ||||||  ||||||||||||||| |||||||||||||||| ||||| ||| ||||||||    
T  1063603 acccacacccagtcaaaacggggaaaacccgtcaaatcgggtttggttcgggcgggtaaccacgggtatgagttttgttgccatgccta 1063691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 17469333 - 17469421
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||||||||||||||||||| ||||| | |||||| |||||||||||||||  |||||| ||||||||||||||| ||| ||||||||    
T  17469333 acccaaacccagtcaaaacggggaaaatccgtcaaattgggtttggttcgggtgggtaactacgggtatgggttttgttgccatgccta 17469421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 17220771 - 17220892
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaac--cacgggt 146  Q
    |||||||||||||| ||||| ||| || ||||||||||| ||||||||| || ||||||| |||||| ||| ||||||||| || ||||||  | |||||    
T  17220771 tgttttgaaatcggggaaaatccatacccatacccaaactcagtcaaaatggggaaaacccgtcaaattggatttggttcgtgcgggtaaccgcgcgggt 17220870  T
Q  147 atgggttttattgtcatgccta 168  Q
    || |||||| ||||||||||||    
T  17220871 ataggttttgttgtcatgccta 17220892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 11255021 - 11254925
Alignment:
Q  72 aaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||| |||||||||||| |||||||||||| |||||| |||||| ||| |||||||||| | ||||||| |  ||||||||||| ||||||||||||    
T  11255021 aaacccatacccaaacctagtcaaaacggaaaaaacccgtcaaattggatttggttcggacaggtaaccgcatgtatgggttttgttgtcatgccta 11254925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 34777142 - 34777238
Alignment:
Q  72 aaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||| ||||||||||||||||||||||||  |||||| || ||| |||||||||||||| | ||||| |||||||||| ||||| ||| ||||||||    
T  34777142 aaacccatacccaaacccagtcaaaacgggaaaaacccgttaaattgggtttggttcggacgggtaatcacgggtatgagttttgttgccatgccta 34777238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 170
Target Start/End: Complemental strand, 15068615 - 15068496
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||||||||||| |||||||| ||| |||||||| ||||||||||| ||| ||||||| ||||||  ||| |||||| |||| |||| ||| ||| | ||    
T  15068615 ttttgaaatcggggaaaacccgaacccatacccagacccagtcaaatcggggaaaacccgtcaaatcggggttggtttgggcgggtacccatgggcacgg 15068516  T
Q  151 gttttattgtcatgcctacc 170  Q
    ||||| ||| ||||||||||    
T  15068515 gttttgttgccatgcctacc 15068496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 34139506 - 34139630
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgg------gtttggttcgggctggtaaccac 142  Q
    |||||| ||||||| ||||||| |||| |||||||||||||||||||||||  ||||||| |||||| |||      ||||||||||||| | |||||||    
T  34139506 tgtttttaaatcggggaaaacc-aaacacatacccaaacccagtcaaaacgaggaaaacccgtcaaattgggtttgagtttggttcgggcggataaccac 34139604  T
Q  143 gggtatgggttttattgtcatgccta 168  Q
    ||||||| ||||| ||||| ||||||    
T  34139605 gggtatgagttttgttgtcgtgccta 34139630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 39445623 - 39445489
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||| ||| ||||||  ||||||||||||||  |||||||| || |||||||||||| ||||||||||| ||||| | |||||| || |||||||||||    
T  39445623 ttacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacctagtcaaaacggggaaaatccgtcaaattgagtttggttcgg 39445524  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgc 165  Q
     |  |||||| ||| ||| | |||||||| |||||    
T  39445523 acgagtaaccgcggatattgattttattgccatgc 39445489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 45236106 - 45236244
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||| | |||||| || || ||||| ||||| |||||||||||| ||||||| |||||| ||| ||||| || |    
T  45236106 ttacccgtcccatacccgtgttttgaaatcagggaaaactcatacccatactcaaactcagtcaaaacggggaaaacccgtcaaattggttttggctcag 45236205  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
     | ||||||  ||||| |||||||| ||| |||||||||    
T  45236206 acaggtaactgcgggtttgggttttgttgccatgcctac 45236244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 14687445 - 14687573
Alignment:
Q  36 cgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctgg 135  Q
    |||| ||||||| |||||||||||||| |||||||||||  |||||||||||||| |||||  || ||||||| | |||| |||||| ||||  ||  ||    
T  14687445 cgtcccatacctgtgttttgaaatcggggaaaacccaaatccatacccaaacccaatcaaagtggggaaaacccgccaaattgggttaggttttggtagg 14687544  T
Q  136 taaccacgggtatgggttttattgtcatg 164  Q
     | || |||||||||||||| ||||||||    
T  14687545 cacccgcgggtatgggttttgttgtcatg 14687573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 6388563 - 6388470
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttg 124  Q
    ||||||||||  ||||  |||||| ||||||| ||| |||||||| ||||||||||| ||||||||||||||||| || |||||| || |||||    
T  6388563 ttacccgtcttgtacccgtgttttaaaatcggggaagacccaaacccatacccaaactcagtcaaaacggagaaagcccgtcaaattgagtttg 6388470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 24870071 - 24869934
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||| ||||||| |||||| || |  ||||||||||  ||||||||||||  |||||| |||||| ||| |||| ||||     
T  24870071 ttacccgtcacatacccgtgttttaaaatcggggaaaactcatagccatacccaaattcagtcaaaacgggaaaaacccgtcaaattggatttgattcga 24869972  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || | |||||  |||| |||||||| ||||||||||||    
T  24869971 gcggataaccgtgggtgtgggttttgttgtcatgccta 24869934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 29416194 - 29416134
Alignment:
Q  71 caaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcggg 131  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||| ||| |||||||||||    
T  29416194 caaactcatacccaaactcagtcaaaacggggaaaacccgtcaaattggatttggttcggg 29416134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 15173928 - 15173843
Alignment:
Q  30 tttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    |||||||||| | ||||  | ||||||||||||  ||||| ||||| |||||||||||||||||||| | ||||||||| ||||||    
T  15173928 tttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaatcagagaaaacccgtcaaa 15173843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 8545378 - 8545279
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||| ||||||||||||| |||||||| || ||| ||| ||||||||||| |||||  || |||||||| || | |||| || |||||||    
T  8545378 tgttttgaaatcggagaaaacccaaacttatacccaatccaagttaaagcggagaaaacc-gtcaatttgagtttggtttggacaggtacccgcgggtat 8545280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 12468248 - 12468171
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttc 128  Q
    ||||| |||||||  ||||||||||| |||||| |||| |||||||||||||||||| ||| ||||| ||||||||||||    
T  12468248 tgtttcgaaatcgaggaaaacccaaattcatactcaaa-ccagtcaaaacggagaaaccca-tcaaattgggtttggttc 12468171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 5700438 - 5700484
Alignment:
Q  84 aaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||    
T  5700438 aaacccagtcaaaacggaaaaaacccgtcaaaataggtttggttcgg 5700484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 2183633 - 2183588
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||    
T  2183633 ttttgaaatcggagaaaatccaaactcatacctaaacccagtcaaa 2183588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 17084154 - 17084027
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||| ||||  |||||| ||||||| ||||||||||| |||     ||||||||||||| ||| ||||||| |||||  ||  ||||||||||    
T  17084154 ttacccgtctcgtacccgtgttttaaaatcggagaaaacccaaa-tca-----aaacccagtcaaagcggggaaaacccgtcaacttgaatttggttcgg 17084061  T
Q  131 gctggtaaccacgggtatgggttttattgtcatg 164  Q
    |  |||| ||||  ||||||||||| ||||||||    
T  17084060 gtgggtacccacaagtatgggttttgttgtcatg 17084027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 36131924 - 36131839
Alignment:
Q  83 caaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||| |||||||||| |||| |  ||||| | |||||||||||||  ||||||||||| ||||  |||| ||||||||||||    
T  36131924 caaacccaatcaaaacggaaaaaatccatcaaattaggtttggttcgggtgggtaaccacggatatgaattttgttgtcatgccta 36131839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 27056602 - 27056518
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    ||||||||| ||||||| |  |||||||||||  ||||||||||| |||| |||||||||| |||| ||  ||||||| ||||||    
T  27056602 ttacccgtcccatacctgtactttgaaatcgggaaaaacccaaacccataaccaaacccagccaaagcgaggaaaacccgtcaaa 27056518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 28345550 - 28345638
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggta 137  Q
    ||||||| ||||||  |||| ||||||  ||||| ||||||||||||| |||  |||||| ||||||| || |||||||||||| ||||    
T  28345550 tgttttggaatcgggtaaaatccaaacctataccgaaacccagtcaaagcgggaaaaacccgtcaaaaaggatttggttcgggcgggta 28345638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 29918666 - 29918713
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    ||||||||||||||  ||||| |||||||||||||||| |||||||||    
T  29918666 tgttttgaaatcgggaaaaactcaaactcatacccaaaaccagtcaaa 29918713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 30481448 - 30481367
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggc 132  Q
    |||||||||| |  ||||||||||||||||| |||||||| ||||||| | ||||| |  ||||  | ||||||||||||||    
T  30481448 ttttgaaatcaggaaaaacccaaactcatactcaaacccaatcaaaacagggaaaatccatcaatttaggtttggttcgggc 30481367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 9642398 - 9642354
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaac 75  Q
    ||||||||| ||||||  |||||||||||||| ||||||||||||    
T  9642398 ttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 9642354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 10297519 - 10297623
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||||||||||| ||||||||||| ||| | ||||||||| | ||| | | ||||||| ||||||   || |||||| |||| |||| ||| ||| ||||    
T  10297519 ttttgaaatcggggaaaacccaaattcacatccaaacccaataaaatcagggaaaacccgtcaaatcaggattggtttgggcgggtacccatgggcatgg 10297618  T
Q  151 gtttt 155  Q
    |||||    
T  10297619 gtttt 10297623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 24568980 - 24569115
Alignment:
Q  32 tacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcggg 131  Q
    |||| ||| ||||||  |||| |||||||||  |||| ||| || |||||| ||||||| ||||| ||| ||||||| |||||| | ||||||||||||     
T  24568980 tacctgtcccatacccatgttgtgaaatcgggaaaaatccatacccatacctaaacccaatcaaa-cggggaaaacccgtcaaattaggtttggttcgga 24569078  T
Q  132 ctggtaaccacgggtatgggttttattgtcatgccta 168  Q
      | ||| |||  ||||| ||||| ||||||||||||    
T  24569079 tagataatcacatgtatgtgttttgttgtcatgccta 24569115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 9e-39; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 30846988 - 30847125
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||||| ||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  30846988 ttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 30847087  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||||||||| ||| ||||||||    
T  30847088 gcgggtaaccacgggtatgggttttgttgccatgccta 30847125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 37106734 - 37106872
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| || ||||||||||| |||||||||||| ||||||| |||||| ||||||||||||||    
T  37106734 ttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 37106833  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || ||||||| || ||||| ||||| |||||||||||||    
T  37106834 gcgggtaaccgcgagtatgagttttgttgtcatgcctac 37106872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 169
Target Start/End: Original strand, 13830781 - 13830915
Alignment:
Q  35 ccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctg 134  Q
    ||||| ||||||  |||||||| ||||  ||||||||| || ||||||||||||||||||||| || ||||||| |||||| |||||||||||||||| |    
T  13830781 ccgtcccatacccgtgttttgagatcgaggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgg 13830880  T
Q  135 gtaaccacgggtatgggttttattgtcatgcctac 169  Q
    ||||||||||||||||||||| ||||||| |||||    
T  13830881 gtaaccacgggtatgggttttgttgtcatacctac 13830915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 37472806 - 37472682
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||||||| |||||| || |||||||||||    
T  37472806 ttacccgtcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgg 37472707  T
Q  131 gctggtaaccacgggtatgggtttt 155  Q
    || ||||||  ||||||||||||||    
T  37472706 gcgggtaactgcgggtatgggtttt 37472682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 24414179 - 24414046
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||| | || |||||||||||||| ||||||||| ||||||| |||||| ||||||||||||||    
T  24414179 ttacccgtcccatacccgtgttttgagatcggggaaaaccgatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgg 24414080  T
Q  131 gctggtaaccacgggtatgggttttattgtcatg 164  Q
    || ||||||||| |||||||||||| ||| ||||    
T  24414079 gcgggtaaccacaggtatgggttttgttgccatg 24414046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 12341652 - 12341779
Alignment:
Q  41 catacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaacc 140  Q
    ||||||| |||||||||||||| ||||||||| || ||||||||||| |||||||||||| ||||||| |||||| |||||||||||||| | | |||||    
T  12341652 catacctgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcggacggataacc 12341751  T
Q  141 acgggtatgggttttattgtcatgccta 168  Q
     |||||||| ||||| ||| ||||||||    
T  12341752 gcgggtatgagttttgttgccatgccta 12341779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 9632428 - 9632566
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||||| ||||||||| || ||||| |||||||| |||||||||  |||||| |||||| || |||||||||||    
T  9632428 ttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatactcaaacccattcaaaacgggaaaaacccgtcaaattgagtttggttcgg 9632527  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || |||||||||||||||||||||| ||| |||||||||    
T  9632528 gcgggtaaccacgggtatgggttttgttgccatgcctac 9632566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 10920698 - 10920818
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||| |||||  |||| ||| || |||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||| |||||||||||||||    
T  10920698 tgttttgagatcggaaaaaatccatacccatacccaaacccagtcaaaacggggaaaacctatcaaattggatttggttcgggcgggtaaccacgggtat 10920797  T
Q  149 gggttttattgtcatgcctac 169  Q
    ||||||| ||| |||||||||    
T  10920798 gggttttgttgccatgcctac 10920818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 45115600 - 45115734
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaa--ctcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttc 128  Q
    ||||||||||||||||  |||||||||||||  |||||| || |  | |||||||||||||||||||||||| ||||||| |||||| ||| ||||||||    
T  45115600 ttacccgtctcatacccgtgttttgaaatcgaggaaaactcatatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttc 45115699  T
Q  129 gggctggtaaccacgggtatgggttttattgtcat 163  Q
    || |  |||||| ||||||||||||||||||||||    
T  45115700 ggacaagtaaccgcgggtatgggttttattgtcat 45115734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 19104866 - 19104747
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||| |||||||| ||||||||||||||||||||||||||| |||||||||| ||||||  ||||| |||||||| |||||  ||||||||||  ||||    
T  19104866 tgtttggaaatcggggaaaacccaaactcatacccaaacccaatcaaaacggaaaaaacccatcaaattgggtttgattcggattggtaaccacatgtat 19104767  T
Q  149 gggttttattgtcatgccta 168  Q
     |||||| ||| ||||||||    
T  19104766 aggttttgttgccatgccta 19104747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 31942233 - 31942095
Alignment:
Q  31 ttacccgtctcatacctttgtttt-gaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcg 129  Q
    ||||||||||||||||  |||||| |||||||  || ||||||||| |||| ||||||||||||||| |||  ||||||  ||||| || |||||||| |    
T  31942233 ttacccgtctcatacccgtgtttttgaaatcgaggataacccaaacccatatccaaacccagtcaaagcgggaaaaacccatcaaattgagtttggtttg 31942134  T
Q  130 ggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||| |||||||||||||||||||||| ||||||| ||||    
T  31942133 ggcgggtaaccacgggtatgggttttgttgtcataccta 31942095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 6027899 - 6027810
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    ||||||||||| ||||||||| ||||||| |||||| |||||||||||||||| | |||||||| ||||||||||| |||||||||||||    
T  6027899 acccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcggataaccacgagtatgggttttgttgtcatgcctac 6027810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 13705408 - 13705264
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaac------ccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttg 124  Q
    ||||| ||||||||||  |||||||||||||| ||||||      ||| || ||||||||||||| |||||||||| ||||||| |||||| ||||| ||    
T  13705408 ttacctgtctcatacccgtgttttgaaatcggggaaaactcatacccatacccatacccaaaccctgtcaaaacggggaaaacccgtcaaattgggtatg 13705309  T
Q  125 gttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |||||| | |||||||| ||||||| ||||| ||| |||||||||    
T  13705308 gttcggacgggtaaccatgggtatgagttttgttgccatgcctac 13705264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 36128153 - 36128016
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||| || ||||||  ||||| || ||||| |||| | || || |||||||||||||||||||||||| ||||| | |||||| | ||||||||||||    
T  36128153 ttacccatcccatacccgtgtttcgagatcggggaaaccacatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattaggtttggttcgg 36128054  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     |  ||||||||||||||||||||| ||| ||||||||    
T  36128053 acgagtaaccacgggtatgggttttgttgccatgccta 36128016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 169
Target Start/End: Original strand, 26755802 - 26755920
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||| |||  |||||| ||||||  ||| |||||| |||| |||| ||| ||| | ||    
T  26755802 ttttaaaatcgaagaaaacccaaactcatacccaaacccagtcaaatcgggaaaaacccgtcaaatcggggttggtttgggcaggtacccatgggcacgg 26755901  T
Q  151 gttttattgtcatgcctac 169  Q
    ||||| |||||||||||||    
T  26755902 gttttgttgtcatgcctac 26755920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 10208477 - 10208341
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||| | || || ||||||||| || |||||||||||||||||||||||| ||||||| |||||| |   ||||||||||    
T  10208477 ttacccgtcccatacccgtgttttaagattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacc-gtcaaattaactttggttcgg 10208379  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || | ||| |||||||||| ||||| ||| ||||||||    
T  10208378 gcggataatcacgggtatgagttttgttgccatgccta 10208341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 12193874 - 12193736
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaa-cggagaaaaccagtcaaaatgggtttggttcg 129  Q
    ||||||||| ||||||  |||| |||||||||  ||||| || |||||||||||||||||||||||| |||| |||||| |||||| ||||||||| |||    
T  12193874 ttacccgtcccatacccgtgttctgaaatcgggaaaaacacatactcatacccaaacccagtcaaaatcgga-aaaacccgtcaaattgggtttggctcg 12193776  T
Q  130 ggctggtaac-cacgggtatgggttttattgtcatgccta 168  Q
    ||  |||||| | ||||||||| |||| ||| ||||||||    
T  12193775 ggtgggtaacgcgcgggtatggtttttgttgccatgccta 12193736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 18106148 - 18106029
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaa-tgggtttggttcgggctggtaaccacgggta 147  Q
    |||||||| ||||| ||||||||| || |||| ||||||||||||||||||| ||||| | ||||||| || ||||| ||||||| |||||||||   ||    
T  18106148 tgttttgagatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccgtcaaaattgagtttgattcgggcgggtaaccacatata 18106049  T
Q  148 tgggttttattgtcatgcct 167  Q
    || ||||| |||||||||||    
T  18106048 tgagttttgttgtcatgcct 18106029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 168
Target Start/End: Complemental strand, 42798001 - 42797911
Alignment:
Q  77 catacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||| |||||||||||||||| || |||||| |||||| | | |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  42798001 catactcaaacccagtcaaaacaga-aaaacccgtcaaattagatttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 42797911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 44746138 - 44746047
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaacc 140  Q
    |||||||||||||| |||||||||||  ||||||||||| || ||||||||| ||||||| |||||| |||||||||| ||||  |||||||    
T  44746138 tgttttgaaatcggggaaaacccaaatccatacccaaactcaatcaaaacggggaaaacccgtcaaattgggtttggtacgggtgggtaacc 44746047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 37999525 - 37999656
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||||||||  |||||||| ||||| |||||||||      |||||| |||||||||||| || | ||||| |||||| ||  ||||||||||    
T  37999525 ttacccgtctcatacccgtgttttgagatcggggaaaaccca------tacccatacccagtcaaaatgggggaaacccgtcaaattgaatttggttcgg 37999618  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||   ||||||||| |||||||||| ||| ||||||||    
T  37999619 gcgactaaccacggatatgggttttgttgccatgccta 37999656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 40734631 - 40734533
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcg 129  Q
    ||||||||||||||||  |||||  |||||| |||||||||||| ||||||||||||| | ||||| |||| |||||| |||||| ||  |||||||||    
T  40734631 ttacccgtctcatacccgtgtttgaaaatcgctgaaaacccaaattcatacccaaaccaaatcaaagcggataaaacccgtcaaattgaatttggttcg 40734533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 7314675 - 7314594
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggc 132  Q
    |||| ||||||| ||||||||| || |||| ||||||||||||||||||| ||||| | |||||| || |||||||||||||    
T  7314675 ttttaaaatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccgtcaaattgagtttggttcgggc 7314594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 10212466 - 10212585
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||||||||| |  |||||  ||||||  ||| | |||  |||| |||| |||| ||||     
T  10212466 tgtttggaaatcggggaaaacccaaactcataccaaaacccagtcaaaacaggaaaaactcgtcaaatcggggtgggtatgggcgggtacccacaggtac 10212565  T
Q  149 gggttttattgtcatgccta 168  Q
    |||| || ||||||||||||    
T  10212566 gggtattgttgtcatgccta 10212585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 35965416 - 35965465
Alignment:
Q  83 caaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggc 132  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  35965416 caaacccaatcaaagcggagaaaaccagtcaaaataggtttggttcgggc 35965465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 45256869 - 45256934
Alignment:
Q  35 ccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacgg 100  Q
    ||||||||||||  |||||||||||||| |||||| || ||||||| ||| |||||||||||||||    
T  45256869 ccgtctcatacccgtgttttgaaatcggggaaaactcatactcatatccacacccagtcaaaacgg 45256934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 15546786 - 15546862
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaac 107  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||| ||| |||| | ||||||||| ||| ||||||    
T  15546786 ttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatgcccagatccagtcaaagcggggaaaac 15546862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 13954805 - 13954883
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggtt 127  Q
    |||||| ||||||| |||||  ||||| |||||||||||||||||||| || |||||||| |||||  || ||||||||    
T  13954805 tgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaacctgtcaatttgcgtttggtt 13954883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 14096012 - 14096090
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggtt 127  Q
    |||||| ||||||| |||||  ||||| |||||||||||||||||||| || |||||||| |||||  || ||||||||    
T  14096012 tgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaacctgtcaatttgcgtttggtt 14096090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 8915984 - 8915848
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||  ||||||||| || |||| |||||| ||||||||||||  |||| | |||||| ||  |||| || ||    
T  8915984 ttacccgtcccatacccgtgttttgagatcga-gaaaacccatacccatatccaaactcagtcaaaacgggaaaaatccgtcaaattgaatttgatttgg 8915886  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || | ||||||| |||||||||||| ||| ||| ||||    
T  8915885 gcggataaccacaggtatgggttttgttgccataccta 8915848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 35248433 - 35248336
Alignment:
Q  30 tttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggtt 127  Q
    |||||||||| ||||||  ||||||| |||||  |||||||||||| | ||||||||| || |||||  |  |||||||  |||||||||||||||||    
T  35248433 tttacccgtcccatacccgtgttttgtaatcgtggaaaacccaaacccgtacccaaactcaatcaaagtgaggaaaacccatcaaaatgggtttggtt 35248336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 35510490 - 35510425
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    ||||||||||  || || ||||||||||| || |||||||||||||| |||||||||| |||||||    
T  35510490 ttacccgtcttgtatctgtgttttgaaattggggaaaacccaaactcttacccaaacctagtcaaa 35510425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 44057945 - 44058031
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggta 137  Q
    |||||||||| | ||||| |||||||| ||||||||||||||||||  ||| |||||  ||||||  ||| |||||| ||| |||||    
T  44057945 ttttgaaatcagggaaaatccaaactcgtacccaaacccagtcaaattggaaaaaactcgtcaaatcggggttggtttgggatggta 44058031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 22900836 - 22900901
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    |||| |||| ||||||  ||||||||||||||  ||||||||||| |||||||| ||| |||||||    
T  22900836 ttactcgtcccatacccgtgttttgaaatcgggaaaaacccaaacccatacccagaccaagtcaaa 22900901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 30978987 - 30979032
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    ||||||||||||  ||||||||||||||||  ||||||||||||||    
T  30978987 ttttgaaatcgggaaaaacccaaactcatattcaaacccagtcaaa 30979032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 6027936 - 6027892
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaac 75  Q
    ||||||||||||||||  |||||| ||||||| ||||||||||||    
T  6027936 ttacccgtctcatacccatgttttaaaatcggggaaaacccaaac 6027892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 9e-39; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 17134989 - 17135126
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||||||||  |||||||||||||| ||||||||| || || ||||||||||||||||||| ||||||| | |||||| ||||||||||||||    
T  17134989 ttacccgtctcatacccgtgttttgaaatcggggaaaacccatacccacacccaaacccagtcaaaacagagaaaatccgtcaaattgggtttggttcgg 17135088  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||| |||||||||||||| ||| ||||||||    
T  17135089 gcgggtaaccgcgggtatgggttttgttgccatgccta 17135126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 36187267 - 36187129
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || |||||||||||||||||||||||| ||||||| | |||| || |||||||||||    
T  36187267 ttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgccaaattgagtttggttcgg 36187168  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || |||||| ||||||||||||||| ||| |||||||||    
T  36187167 gcgggtaacgacgggtatgggttttgttgccatgcctac 36187129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 51421900 - 51422038
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| |||||  |||||||| || ||||||||||||||||||||| || |||||||  ||||| ||||||||||||||    
T  51421900 ttacccgtcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaatggggaaaacccatcaaattgggtttggttcgg 51421999  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || ||||||||||| ||||| |||||||| |||||||||    
T  51422000 gcgggtaaccacggatatggattttattgccatgcctac 51422038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 23968621 - 23968758
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||| ||| ||||||||| || |||||||||||||| |||||| || ||||| | |||||| ||||||||||||||    
T  23968621 ttacccgtcccatacccgtgttttgaaaccggggaaaacccatacccatacccaaacccaatcaaaatggggaaaatccgtcaaattgggtttggttcgg 23968720  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||| |||||||||||||| ||| ||||||||    
T  23968721 gcgggtaaccgcgggtatgggttttgttgccatgccta 23968758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 49250820 - 49250683
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| |||||| || || |||||||||||||||||||||||||||||||| |||||| ||  ||||||||||    
T  49250820 ttacccgtcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaacggagaaaacccgtcaaattgaatttggttcgg 49250721  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || | ||||||||||||||  |||| ||||||||||||    
T  49250720 gcggataaccacgggtatgaattttgttgtcatgccta 49250683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 29936501 - 29936601
Alignment:
Q  68 acccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcct 167  Q
    ||||| ||||||||||||||  ||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  29936501 acccatactcatacccaaacttagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgtcatgcct 29936600  T
Q  168 a 168  Q
    |    
T  29936601 a 29936601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 24710889 - 24711027
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| ||||||| ||||||||||||||||||| ||||||| |||||| ||  ||||||||||    
T  24710889 ttacccgtcccatacccgtgttttgagatcggggaaaacccatactcatatccaaacccagtcaaaacggggaaaacccgtcaaattgaatttggttcgg 24710988  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |  | ||| ||||||| |||||||| |||||||||||||    
T  24710989 gtggataatcacgggtgtgggttttgttgtcatgcctac 24711027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 5181081 - 5181218
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  | |||||||||||| ||||||||| || |||||| |||||||||||||| || ||||||| |||||| ||  ||||||||||    
T  5181081 ttacccgtcccatacccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaaatggggaaaacccgtcaaattgaatttggttcgg 5181180  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||| |||||||||||||| ||| ||||||||    
T  5181181 gcgggtaaccgcgggtatgggttttgttgccatgccta 5181218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 44615522 - 44615389
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||| ||||| | |||||||||||||||||||||||||||||||||||||  |||||| |||||| || |||||||  ||    
T  44615522 ttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggtctgg 44615423  T
Q  131 gctggtaaccacgggtatgggttttattgtcatg 164  Q
    |  |||||||||||||||||||||| ||| ||||    
T  44615422 gtgggtaaccacgggtatgggttttgttgccatg 44615389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 44793047 - 44793180
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||| ||||| | |||||||||||||||||||||||||||||||||||||  |||||| |||||| || |||||||  ||    
T  44793047 ttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggtctgg 44793146  T
Q  131 gctggtaaccacgggtatgggttttattgtcatg 164  Q
    |  |||||||||||||||||||||| ||| ||||    
T  44793147 gtgggtaaccacgggtatgggttttgttgccatg 44793180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 19572559 - 19572425
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||| ||| ||||||  ||||||||||||||  |||||||| || ||||||||||||||||||||| || ||||||| |||||| | ||||||||||||    
T  19572559 ttacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattaggtttggttcgg 19572460  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgc 165  Q
    || |||||||||  ||||||||||| ||| |||||    
T  19572459 gcgggtaaccacaagtatgggttttgttgccatgc 19572425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 39616334 - 39616472
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||||||||  |||||  ||||||||||| || ||||||||| |||||||||||||| |||||||||||| ||||||  |||||| || |||||||||||    
T  39616334 ttacccgtcctatacccgtgttttgaaataggggaaaacccatactcatacccaaactcagtcaaaacggggaaaactcgtcaaattgagtttggttcgg 39616433  T
Q  131 gctggtaaccac-gggtatgggttttattgtcatgccta 168  Q
    || ||||||| | ||||||| ||||| ||||||||||||    
T  39616434 gcgggtaaccgcggggtatgagttttgttgtcatgccta 39616472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 16408984 - 16409120
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||||||||| || ||||||||| || |||||||||||||||||||||||| ||||||| |||||| |||||||| ||||     
T  16408984 ttacccgtcccatacccgtgttttgaaattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttgattcga 16409083  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |  |||||||  | ||||||||||| ||||||||||||    
T  16409084 g-gggtaaccgtgtgtatgggttttgttgtcatgccta 16409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 34673329 - 34673192
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||| ||||||||||  ||||||||||| ||  ||||||||||| |||||||||||||||| |||| || ||||| | || ||| ||||||||||||||    
T  34673329 ttaccagtctcatacccgtgttttgaaattgggaaaaacccaaacccatacccaaacccagttaaaatggggaaaatccgttaaattgggtttggttcgg 34673230  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||| ||| |||||| ||||| ||||||||||||    
T  34673229 gcgggtaatcactggtatgagttttgttgtcatgccta 34673192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 45866232 - 45866096
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||| ||||||||||  |||||||||||||| ||||||||| || |||||||||||| |||||||| |||||||||| |||||  | ||||||| ||||    
T  45866232 ttacctgtctcatacccgtgttttgaaatcggggaaaacccatacccatacccaaacctagtcaaaa-ggagaaaacccgtcaatttaggtttggctcgg 45866134  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||| || ||||||||||| ||| ||||||||    
T  45866133 gcgggtaaccgcgagtatgggttttgttgccatgccta 45866096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 9982919 - 9982800
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||||||||| || |||||  |||||||||||||||||||||||||||||||||||| |  ||||| ||| |||||||||||   ||||||||||||||    
T  9982919 tgttttgaaattggggaaaattcaaactcatacccaaacccagtcaaaacggagaaaatccatcaaattggatttggttcgggagagtaaccacgggtat 9982820  T
Q  149 gggttttattgtcatgccta 168  Q
    | ||||| ||| ||||||||    
T  9982819 gagttttgttgccatgccta 9982800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 20774654 - 20774745
Alignment:
Q  77 catacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||||||||||||||||||| ||||| | |||||| |||||||||||||||| |||||||||| ||||||||||| ||| ||||||||    
T  20774654 catacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttggttcgggcgggtaaccacgagtatgggttttgttgccatgccta 20774745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 24236790 - 24236671
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||| ||||| ||||||||| || |||||| |||||||||||||||||  |||||| |||||| || ||||||||||||| |||||||| ||||||    
T  24236790 tgttttgagatcggggaaaacccatacccatacctaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccatgggtat 24236691  T
Q  149 gggttttattgtcatgccta 168  Q
    | ||||| ||| ||||||||    
T  24236690 gagttttgttgccatgccta 24236671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 13390457 - 13390574
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||| |||||  || || |||||||||||||||||||||||| |||| || |||||| |||||||||||||||| |||||||  ||||||    
T  13390457 tgttttgaaatcggggaaaattcatacccatacccaaacccagtcaaaacggggaaaccc-gtcaaattgggtttggttcgggcgggtaaccgtgggtat 13390555  T
Q  149 gggttttattgtcatgcct 167  Q
    ||||||| ||| |||||||    
T  13390556 gggttttgttgccatgcct 13390574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 23490818 - 23490681
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||||| ||||||||| || |||||||||||||||||||||| |  |||||| |||||| ||| ||||||||||    
T  23490818 ttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacaggaaaaacccgtcaaattggatttggttcgg 23490719  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||| | | ||||||||||| ||| ||||||||    
T  23490718 gcgggtaactatgagtatgggttttgttgccatgccta 23490681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 50426665 - 50426565
Alignment:
Q  68 acccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcct 167  Q
    |||||||| || ||||||||||||||||||||||||||||| || ||| ||||||||||||| || ||||||| ||||||||| |||| ||| |||||||    
T  50426665 acccaaacccaaacccaaacccagtcaaaacggagaaaacctgttaaattgggtttggttcgagccggtaaccgcgggtatggattttgttgccatgcct 50426566  T
Q  168 a 168  Q
    |    
T  50426565 a 50426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 13020653 - 13020772
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||| ||||||||| || |||| |||||||||||||| |||||||||||| |||| | || ||||||||||| | ||||||| | | |||    
T  13020653 tgttttgaaatcggggaaaacccatacccataaccaaacccagtcaagacggagaaaacccgtcagattgagtttggttcggacaggtaaccgcagatat 13020752  T
Q  149 gggttttattgtcatgccta 168  Q
     |||||| ||||||||||||    
T  13020753 aggttttgttgtcatgccta 13020772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 34611133 - 34611251
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||| |||||  |||||||| || ||||||||||  || ||||||||| ||||||| |||||| ||| |||||||| ||| |||||||||||||||    
T  34611133 tgttttgagatcgggaaaaacccatacccatacccaaattcaatcaaaacggggaaaacccgtcaaattggatttggttcaggcgggtaaccacgggtat 34611232  T
Q  149 gggttttattgtcatgcct 167  Q
    || |||| |||||||||||    
T  34611233 ggattttgttgtcatgcct 34611251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 13798280 - 13798377
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttc 128  Q
    |||||| |||||||||  ||||||||||||||  |||||||||||||||||||||||||||||| | ||| ||||||| || ||| ||||||||||||    
T  13798280 ttacccatctcatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgttaaattgggtttggttc 13798377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 18354127 - 18353990
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| || ||||  |||| |||||||||||||  |||||| |||||| ||  ||||||||||    
T  18354127 ttacccgtcccatacccatgttttgaaatcggggaaaacccatacccatattcaaatccagtcaaaacgggaaaaacccgtcaaattgaatttggttcgg 18354028  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||| | |||||| ||||||| ||| ||||||||    
T  18354027 gcgggtaatcgcgggtacgggttttgttgccatgccta 18353990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 166
Target Start/End: Complemental strand, 29871332 - 29871198
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||| ||| ||||||  |||||||||||||| ||||||||||||||||||||||||  ||||||||||  ||||||| |||||| || |||||| ||||    
T  29871332 ttacctgtcccatacccatgttttgaaatcggagaaaacccaaactcatacccaaacttagtcaaaacgaggaaaacccgtcaaattgagtttgg-tcgg 29871234  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcc 166  Q
       | |||||||| ||||| ||||| ||||||||||    
T  29871233 atggataaccacgagtatgagttttgttgtcatgcc 29871198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 33293578 - 33293480
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcg 129  Q
    ||||||||| ||||||  ||||||||||||||  |||||||||||||||||||||||||| |||||||||| ||||   |||||||||| ||| |||||    
T  33293578 ttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccaatcaaaacggaaaaaattcgtcaaaatggatttagttcg 33293480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 35936855 - 35936736
Alignment:
Q  52 tttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatggg 151  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| |   |||||| |||| | ||  |||||||||| | |||||| ||||||||||     
T  35936855 tttgaaatcggggaaaacccaaactcatacccaaaccaagtcaaaatgagaaaaacccgtcagattgaatttggttcggacaggtaactacgggtatgga 35936756  T
Q  152 tt---ttattgtcatgccta 168  Q
    ||   |||||||||||||||    
T  35936755 ttttgttattgtcatgccta 35936736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 10778614 - 10778530
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    ||||||||| ||||||  ||||||||||||||  |||||  ||||||||||||||||||||||||| |||| |||||| ||||||    
T  10778614 ttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaactcatacccaaacccagtcaaagcggaaaaaacccgtcaaa 10778530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 34085295 - 34085361
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    ||||||||||||||  |||||||||||||||| || |||||||||||| ||||||||||| ||||||    
T  34085295 tgttttgaaatcgggaaaaacccaaactcatatcctaacccagtcaaagcggagaaaacccgtcaaa 34085361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 42707884 - 42707818
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaa 97  Q
    ||||||||| ||||||  |||||||||||||| |||||| || ||||||||||||||||||||||||    
T  42707884 ttacccgtcccatacccgtgttttgaaatcggagaaaactcatactcatacccaaacccagtcaaaa 42707818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 28298025 - 28298126
Alignment:
Q  68 acccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcct 167  Q
    ||||| || |||||||||| ||| ||||||| | ||||||| |||||| ||| |||||||||||  ||||||||||| |||| ||||| ||| |||||||    
T  28298025 acccatacccatacccaaatccaatcaaaacagggaaaacccgtcaaattggatttggttcgggtgggtaaccacggatatgagttttgttgacatgcct 28298124  T
Q  168 ac 169  Q
    ||    
T  28298125 ac 28298126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 163
Target Start/End: Complemental strand, 5293432 - 5293321
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||||||||||| |||| ||||||||||||| ||||| |||||||| ||||||||||| || ||| ||||||| |||| ||| |||| || |  |||||     
T  5293432 ttttgaaatcggagaaa-cccaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgggtttagttcaggcgggtatccgcatgtatgt 5293334  T
Q  151 gttttattgtcat 163  Q
    ||||| |||||||    
T  5293333 gttttgttgtcat 5293321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 12495070 - 12495190
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||||||||||||  |||||| |||| |||||| |||||||||||||  || ||||| | |||||| ||| |||||||| ||  |||||||||  ||||    
T  12495070 tgttttgaaatcgggaaaaaccaaaacccataccgaaacccagtcaaagtggggaaaatccgtcaaattggatttggttcaggtgggtaaccacatgtat 12495169  T
Q  149 gggttttattgtcatgcctac 169  Q
    |  |||| |||||||||||||    
T  12495170 gaattttgttgtcatgcctac 12495190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 2514817 - 2514896
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcata-cccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggtt 127  Q
    ||||||||||| || ||||||||||||||||| |||||||||| ||||||||| |||||||  ||||  |||||||||||    
T  2514817 tgttttgaaattggggaaaacccaaactcataccccaaacccaatcaaaacggggaaaacccatcaagttgggtttggtt 2514896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 40087500 - 40087374
Alignment:
Q  41 catacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaacc 140  Q
    ||||||| ||||||||| |||| |||||| || || ||||||||||| |||||||||||| ||||| | |||||| ||  |||||||| | | | |||||    
T  40087500 catacctgtgttttgaa-tcggggaaaactcatacccatacccaaactcagtcaaaacggggaaaatccgtcaaattgaatttggttcagacggataacc 40087402  T
Q  141 acgggtatgggttttattgtcatgccta 168  Q
     |||||||| ||||| ||| ||||||||    
T  40087401 gcgggtatgagttttgttgccatgccta 40087374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 168
Target Start/End: Complemental strand, 19003693 - 19003576
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    ||||| |||||| |||||||| ||| |||||||||||| ||||||| ||| ||||||| ||||||  ||| ||| || |||| |||| ||| ||| | ||    
T  19003693 ttttgtaatcggggaaaacccgaacccatacccaaacctagtcaaatcggggaaaacccgtcaaatcggggttgctttgggcgggtacccatgggcacgg 19003594  T
Q  151 gttttattgtcatgccta 168  Q
    ||||| ||| ||||||||    
T  19003593 gttttgttgccatgccta 19003576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 3627989 - 3627907
Alignment:
Q  86 acccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||||||||||  |||||   ||||| || ||||||||||||| ||||||| || ||||| ||||| ||||||||||||    
T  3627989 acccagtcaaaacgggaaaaactcatcaaattgagtttggttcgggcgggtaaccgcgtgtatgagttttgttgtcatgccta 3627907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 16433174 - 16433088
Alignment:
Q  83 caaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |||||||| |||||| || ||||| | |||||| || |||||||||||   ||||||||||| ||| |||||||||| |||||||||    
T  16433174 caaacccaatcaaaatggggaaaatccgtcaaattgagtttggttcggatgggtaaccacggatataggttttattgccatgcctac 16433088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 42439717 - 42439581
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||| |||| ||||||  |||||||| |||||  ||||  || || ||||||||||| ||||||||| ||| ||||   |||||| || |||||||||||    
T  42439717 ttactcgtcccatacccatgttttgagatcggaaaaaattcatacccatacccaaactcagtcaaaatggaaaaaatttgtcaaattgagtttggttcgg 42439618  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcct 167  Q
    || | ||||||||  ||||| |||| ||| |||||||    
T  42439617 gcggataaccacgaatatggattttgttgccatgcct 42439581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 35069913 - 35069862
Alignment:
Q  54 tgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaa 105  Q
    ||||||||| |||||| |||||||||||||||| |||||||||  |||||||    
T  35069913 tgaaatcggggaaaactcaaactcatacccaaatccagtcaaattggagaaa 35069862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 16237331 - 16237277
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaa 105  Q
    |||||||||||| ||||||||||| ||||| |||||| ||||||||  |||||||    
T  16237331 ttttgaaatcggggaaaacccaaattcatatccaaactcagtcaaattggagaaa 16237277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 49741020 - 49740934
Alignment:
Q  84 aaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcctacc 170  Q
    |||||||||||||| || ||||| | |||||| || |||||||||  |  | ||||||||||||||| |||| ||| ||||||||||    
T  49741020 aaacccagtcaaaaaggggaaaatccgtcaaattgagtttggttcaagtggataaccacgggtatggattttgttgccatgcctacc 49740934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 23058528 - 23058573
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    |||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  23058528 ttttgaaatcggagaaaactcaaacccatactcaaacccagtcaaa 23058573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 41476965 - 41476900
Alignment:
Q  65 aaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||||||||  ||||| |||||||| |||  ||||||  ||||||| ||||||||||||    
T  41476965 aaaacccaaactcatattcaaactcagtcaaagcgggaaaaacccatcaaaataggtttggttcgg 41476900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 9492385 - 9492353
Alignment:
Q  193 aaacagattaaccctagtctaataaatcgtact 225  Q
    |||||||||||||||||||| ||||||||||||    
T  9492385 aaacagattaaccctagtctgataaatcgtact 9492353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 167
Target Start/End: Original strand, 10072512 - 10072648
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||  ||||||  |||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  10072512 ttacccgttccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 10072611  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcct 167  Q
    || ||||||| |||||||||||||| ||| |||||||    
T  10072612 gcgggtaaccgcgggtatgggttttgttgccatgcct 10072648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 17885511 - 17885649
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||| ||||||| ||||||||| || ||||  |||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  17885511 ttacccgtcccatacccatgttttaaaatcggggaaaacccatacccatattcaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 17885610  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || |||||||||||||||||||||| ||| |||||||||    
T  17885611 gcaggtaaccacgggtatgggttttgttgccatgcctac 17885649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 35074516 - 35074653
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||| | ||||| ||||||||| || |||||||||||||||||||||||| ||||||| ||| || ||||||||||||||    
T  35074516 ttacccgtcccatacccgtgttttaagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtctaattgggtttggttcgg 35074615  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||||||||| ||| ||||||||    
T  35074616 gcgggtaaccacgggtatgggttttgttgccatgccta 35074653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 45885812 - 45885675
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| |||||| || || |||||||||||||||||||||||||||||||| || ||| |||||||||||||     
T  45885812 ttacccgtcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaacggagaaaacccgttaaattgggtttggttcga 45885713  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||||||||| ||| ||||||||    
T  45885712 gcgggtaaccacgggtatgggttttgttgccatgccta 45885675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 21702705 - 21702842
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || ||||| ||||||||| |||||||||||||||||||||||||||  |||| | |||||| ||||||||||||||    
T  21702705 ttacccgtcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaacccagtcaaaacgggaaaaatccgtcaaattgggtttggttcgg 21702804  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||||||| |||||||||| ||| ||||||||    
T  21702805 gcgggtaaccacggatatgggttttgttgccatgccta 21702842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 25905674 - 25905811
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||| |||||||| || || ||||||||| || ||||||||||||||||||||| || ||||||| |||||| ||||||| |||||     
T  25905674 ttacccgtcccatacctgtgttttgagattggggaaaacccatacccatacccaaacccagtcaaaaaggggaaaacctgtcaaattgggtttagttcga 25905773  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || |||||||||||||||||||||| ||| ||||||||    
T  25905774 gcgggtaaccacgggtatgggttttgttgccatgccta 25905811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 30650677 - 30650815
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| || || |||||| || || |||||| ||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  30650677 ttacccgtcccatacccgtgttttgagattggggaaaactcatacccatacctaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 30650776  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    || |||||||||||||||| ||||| ||| |||||||||    
T  30650777 gcgggtaaccacgggtatgagttttgttgacatgcctac 30650815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 16866215 - 16866352
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    |||| |||| ||||||  |||||||| ||||| ||||||||| || |||| ||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  16866215 ttactcgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 16866314  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||||||| |||| ||||| ||| ||||||||    
T  16866315 gcgggtaaccacggatatgagttttgttgccatgccta 16866352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 43507491 - 43507628
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||||||||  |||||||||||||| ||||||||| ||| ||||||||||||||||||||||| |||||||  ||||| |||||||||||| |    
T  43507491 ttacccgtctcatacccatgttttgaaatcggggaaaacccatacttatacccaaacccagtcaaaacggggaaaacccatcaaattgggtttggttcag 43507590  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     | ||||||| ||| ||||  |||||||| ||||||||    
T  43507591 acgggtaaccgcggatatgaattttattgccatgccta 43507628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 37182321 - 37182457
Alignment:
Q  32 tacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcggg 131  Q
    |||||||| ||||||  ||||||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||| |||||| || ||||| ||||||    
T  37182321 tacccgtcccatacccgtgttttgaattcggagaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttgattcggg 37182420  T
Q  132 ctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    | ||||||| ||| |||||||||| ||| || |||||    
T  37182421 cgggtaaccgcggatatgggttttgttgccacgccta 37182457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 24753210 - 24753346
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||| || |||| ||||||||||||||||||||||||| | |||||| ||  ||||||||||    
T  24753210 ttacccgtcccatacccgtgttttgagatcgg-gaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattgaatttggttcgg 24753308  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     | |||||||||||||||||||||| ||| ||||||||    
T  24753309 acgggtaaccacgggtatgggttttgttgccatgccta 24753346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 7780058 - 7780190
Alignment:
Q  35 ccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctg 134  Q
    ||||| ||||||  |||||||| ||||| ||||||||| || |||||||||||||||||||||||| ||||| | |||||| || |||||||||||   |    
T  7780058 ccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattgagtttggttcggatgg 7780157  T
Q  135 gtaaccacgggtatgggttttattgtcatgcct 167  Q
    ||||||||||||||||||||| ||| |||||||    
T  7780158 gtaaccacgggtatgggttttgttgccatgcct 7780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 17851925 - 17852035
Alignment:
Q  58 atcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttat 157  Q
    ||||| ||||||||| || |||||||||||||||||||||||||||||| |  ||||| |||||||||||||||| |||||||||  ||||||||||| |    
T  17851925 atcggggaaaacccatacccatacccaaacccagtcaaaacggagaaaatccatcaaattgggtttggttcgggcgggtaaccacaagtatgggttttgt 17852024  T
Q  158 tgtcatgccta 168  Q
    || ||||||||    
T  17852025 tgccatgccta 17852035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 12980423 - 12980556
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||||| |||| ||||||||||||||||||||| || ||||||| || ||| || |||||||||      
T  12980423 ttacccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccatacccaaacccagtcaaaatggggaaaacccgttaaattgagtttggttcta 12980522  T
Q  131 gctggtaaccacgggtatgggttttattgtcatg 164  Q
    || |||||||||||||||| ||||| ||| ||||    
T  12980523 gcgggtaaccacgggtatgagttttgttgccatg 12980556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 37218051 - 37218188
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| | ||||| ||||||||||| ||  ||||| |||||||||||||||||||||||||||||| |||||||  ||||| || |||||||||||    
T  37218051 ttacccgtcccgtacctgtgttttgaaataggataaaactcaaactcatacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttcgg 37218150  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |  |||| || | |||||| ||||| ||||||||||||    
T  37218151 gtgggtatccgctggtatgagttttgttgtcatgccta 37218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 38139839 - 38139702
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| |||||   ||||||||||| || ||||||||| || |||| ||||||||||||||||||| ||||| |  ||||| ||||||||||||||    
T  38139839 ttacccgtcccatactcgtgttttgaaattggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccatcaaattgggtttggttcgg 38139740  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||| ||| |||||||||| ||| ||||||||    
T  38139739 gcgggtaaccgcggatatgggttttcttgccatgccta 38139702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 39456062 - 39455953
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| |  |||||||||||||||||||||||| ||||||  |||||| ||||||||||||||    
T  39456062 ttacccgtcccatacccatgttttgaaatcggggaaaacccatatccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtttggttcgg 39455963  T
Q  131 gctggtaacc 140  Q
    || |||||||    
T  39455962 gcgggtaacc 39455953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 16079059 - 16079183
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||| ||||| ||||||||||||| |||||||||| |||||||||| || |||||  |||||| | |||||| |||||    
T  16079059 ttacccgtcccatacccgtgttttgagatcggagaaaacccaaacttatacccaaactcagtcaaaaccgaaaaaactcgtcaaattaggtttgcttcgg 16079158  T
Q  131 gctggtaaccacgggtatgggtttt 155  Q
    || |||||||||| |||||||||||    
T  16079159 gcgggtaaccacgagtatgggtttt 16079183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 18825919 - 18825776
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcataccc------aaacccagtcaaaacggagaaaaccagtcaaaatgggtttg 124  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||| || ||||      ||||||||||||||||| ||||||| |||||| ||||||||    
T  18825919 ttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccacaccctcacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttg 18825820  T
Q  125 gttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||| | | |||||| ||||||||||||| ||| ||||||||    
T  18825819 gttcggacggttaaccatgggtatgggttttgttgccatgccta 18825776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 18125275 - 18125141
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  ||||| || |||||  |||||||| |||||||| |||||||||||||||||| ||||||| |||||| ||| ||||||||||    
T  18125275 ttacccgtcccatacccgtgtttcgagatcgggaaaaacccatactcatacacaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgg 18125176  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgc 165  Q
    ||  |||||||||| ||||  |||| |||||||||    
T  18125175 gcgagtaaccacggatatgaattttgttgtcatgc 18125141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 27850373 - 27850242
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| |||||||||      |||||||||||| ||||||||| ||||| | |||||| ||||||||||||||    
T  27850373 ttacccgtcccatacccgtgttttgaaatcggggaaaaccca------tacccaaacccaatcaaaacggggaaaaaccgtcaaattgggtttggttcgg 27850280  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||||||| |||| ||||| ||| ||||||||    
T  27850279 gcgggtaaccacggatatgagttttgttgccatgccta 27850242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 37579325 - 37579431
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||| ||||||||  |||| |||||| |||||||||||| ||||||||||| ||||||| ||| || |||||||||||||||| |||||||||| ||||    
T  37579325 tgtttcgaaatcgggaaaaatccaaacccatacccaaacctagtcaaaacggggaaaacccgtctaattgggtttggttcgggcgggtaaccacgcgtat 37579424  T
Q  149 gggtttt 155  Q
    |||||||    
T  37579425 gggtttt 37579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 49 - 155
Target Start/End: Complemental strand, 44658496 - 44658390
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    ||||||||||||||  ||||| || || |||||||||||||||||||||||  ||||||| |||||| ||| |||||||||||| ||||||| |||||||    
T  44658496 tgttttgaaatcgggaaaaactcatacccatacccaaacccagtcaaaacgaggaaaacccgtcaaattggatttggttcgggcaggtaaccgcgggtat 44658397  T
Q  149 gggtttt 155  Q
    |||||||    
T  44658396 gggtttt 44658390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 39317042 - 39317179
Alignment:
Q  32 tacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcggg 131  Q
    |||||||| ||||||  |||||||||||||  |||||| || ||||||| ||||||||||||||||||| ||||||| |||||| || ||||||||||||    
T  39317042 tacccgtcccatacccgtgttttgaaatcgaggaaaactcatactcatatccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcggg 39317141  T
Q  132 ctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    | | ||||| || |||||  |||| ||| |||||||||    
T  39317142 cggataaccgcgagtatgaattttgttgccatgcctac 39317179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 168
Target Start/End: Complemental strand, 41741493 - 41741360
Alignment:
Q  35 ccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctg 134  Q
    ||||||||||||  |||||||||||||| ||||||||| ||||||||||||| ||||| |||| || ||||||   ||||| |||||||||||||||| |    
T  41741493 ccgtctcatacccgtgttttgaaatcggggaaaacccatactcatacccaaatccagtaaaaatggggaaaactcatcaaattgggtttggttcgggcgg 41741394  T
Q  135 gtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||| |   |||||||||| ||| ||||||||    
T  41741393 gtaaccgcaaatatgggttttgttgccatgccta 41741360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 5377130 - 5377265
Alignment:
Q  30 tttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcg 129  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||| ||| |||| |||||||||  |||| | || ||| | | ||||||||     
T  5377130 tttacccgtcccatacctgtgttttgaaatcggggaaaacccaaactcatactcaaccccaatcaaaacgggaaaaatccgttaaattagatttggttca 5377229  T
Q  130 ggctggtaaccacgggtatgggttttattgtcatgc 165  Q
    |   ||||||||||||||||  ||||||||||||||    
T  5377230 gataggtaaccacgggtatgaattttattgtcatgc 5377265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 38152951 - 38153069
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtat 148  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||| | |||||| || ||||||||||||| |||||||  ||||||    
T  38152951 tgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacgg-gaaaatccgtcaaattgagtttggttcgggcgggtaaccgtgggtat 38153049  T
Q  149 gggttttattgtcatgccta 168  Q
     | |||| ||| ||||||||    
T  38153050 agtttttgttgccatgccta 38153069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 24425466 - 24425551
Alignment:
Q  83 caaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||    
T  24425466 caaacccaatcaaaacggagaaaatccgtcaaattgggtttggttcgggctggtaaccacgtgtatgagttttgttgccatgccta 24425551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 168
Target Start/End: Complemental strand, 2630618 - 2630484
Alignment:
Q  33 acccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggc 132  Q
    ||||||| ||||||  |||||| ||||||| |||||||||||| |||||||||||||||| |||| ||  |||||  |||||| ||||||||||| |||     
T  2630618 acccgtcccatacccatgtttt-aaatcggggaaaacccaaacccatacccaaacccagtaaaaatgggtaaaacacgtcaaattgggtttggtttgggt 2630520  T
Q  133 tggtaaccacgggtatgggttttattgtcatgccta 168  Q
     |||| ||| |||||| |||||| ||||||||||||    
T  2630519 aggtatccatgggtatcggttttgttgtcatgccta 2630484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 37196044 - 37195921
Alignment:
Q  43 tacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccac 142  Q
    ||||| |||||||||||||| ||||| ||| || |||||||||||| | ||||||| | ||||| | |||||| || |||||||| |||| | |||||||    
T  37196044 tacctgtgttttgaaatcggggaaaatccatacccatacccaaacctaatcaaaacagggaaaatccgtcaaattgagtttggtttgggcggataaccac 37195945  T
Q  143 gggtatgggttttattgtcatgcc 166  Q
    |||||||| |||| ||||||||||    
T  37195944 gggtatggattttgttgtcatgcc 37195921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 3226993 - 3226856
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| || ||||| ||||| |||| ||||||  ||||| | |||||| ||||||||||||||    
T  3226993 ttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatactcaaactcagttaaaacgaggaaaatccgtcaaattgggtttggttcgg 3226894  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
     | ||||||| |  |||||| |||| ||| ||||||||    
T  3226893 acgggtaaccgcatgtatggattttgttgccatgccta 3226856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 26004484 - 26004395
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |||||||||||||||||||||  ||||||  ||||| || ||||||||||||| |||||||||||||||| ||||| ||| |||||||||    
T  26004484 acccaaacccagtcaaaacgggaaaaacccatcaaattgtgtttggttcgggcgggtaaccacgggtatgagttttgttgccatgcctac 26004395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 44734404 - 44734269
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||| ||| ||||||  |||||||||||||   ||||| || || ||| ||||||||||||||||| |||  ||||| |||||| ||||||||||||||    
T  44734404 ttaccggtcccatacccgtgttttgaaatcgagaaaaacacatacacattcccaaacccagtcaaaaggga--aaacccgtcaaattgggtttggttcgg 44734307  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    || ||||||| || ||||| ||||| ||| ||||||||    
T  44734306 gcgggtaaccgcgagtatgagttttgttgccatgccta 44734269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 168
Target Start/End: Complemental strand, 44785285 - 44785168
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||||| ||||| ||||||||| || |||||||||||  ||||||||||| ||||||  |||||| |||||||| ||||||| |||||||||  |||||     
T  44785285 ttttgagatcggagaaaacccatacccatacccaaacttagtcaaaacggggaaaactcgtcaaattgggtttgattcgggcgggtaaccacatgtatga 44785186  T
Q  151 gttttattgtcatgccta 168  Q
     |||| ||| ||||||||    
T  44785185 attttgttgccatgccta 44785168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 45380153 - 45380261
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||| ||||||  | ||||||||||||  |||||||| || |||| ||||||||||||||||| | ||||||| |||||| ||||||||||||||    
T  45380153 ttacccgtcccatacccgtattttgaaatcgggaaaaacccatacccatatccaaacccagtcaaaacagggaaaacc-gtcaaattgggtttggttcgg 45380251  T
Q  131 gctggtaacc 140  Q
     | |||||||    
T  45380252 acgggtaacc 45380261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 23533614 - 23533526
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||||||||||||||| |||  |||||| |||||| |||||||||||||||  |||| || ||||||||| |||| ||||||||||||    
T  23533614 acccaaacccagtcaaatcgggaaaaacccgtcaaattgggtttggttcgggagggtacccgcgggtatggattttgttgtcatgccta 23533526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 170
Target Start/End: Complemental strand, 30839161 - 30839041
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacgg-agaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatg 149  Q
    |||||||||| | |||||| |||||||||||||||||||||||||| ||| |||||||| ||||||  ||| |||||| | || ||||  || ||  | |    
T  30839161 ttttgaaatcagggaaaactcaaactcatacccaaacccagtcaaatcggaagaaaacccgtcaaatcggggttggtttgagcgggtactcatggacacg 30839062  T
Q  150 ggttttattgtcatgcctacc 170  Q
    |||||| ||||||||||||||    
T  30839061 ggttttgttgtcatgcctacc 30839041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 44985944 - 44985828
Alignment:
Q  52 tttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatggg 151  Q
    ||||||||||| ||||||||| |  |||||||||||||| ||||||||||||||| | |||||| | | ||||||||||   ||||||| || ||||| |    
T  44985944 tttgaaatcggagaaaacccatatccatacccaaacccaatcaaaacggagaaaatccgtcaaattagatttggttcggatgggtaaccgcgagtatgag 44985845  T
Q  152 ttttattgtcatgccta 168  Q
    |||| |||  |||||||    
T  44985844 ttttgttgcaatgccta 44985828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 8906631 - 8906552
Alignment:
Q  36 cgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    ||||||||||   |||||||||||||| |||||| ||||| |||||||||| ||| ||||| ||||||||||| ||||||    
T  8906631 cgtctcatactcgtgttttgaaatcggagaaaactcaaacccatacccaaatccaatcaaagcggagaaaacccgtcaaa 8906552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 23475273 - 23475198
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggtttt 155  Q
    ||||||||||||||||| ||| ||||||| |||||| || |||||||||| |  |||| |||||||||||||||||    
T  23475273 acccaaacccagtcaaagcggggaaaacccgtcaaattgagtttggttcgagagggtatccacgggtatgggtttt 23475198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 3157149 - 3157234
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggta 137  Q
    |||||||||||| ||||||| |||| |||||||||||| ||||||| ||| ||||||| | |||| | |||||||||||||| ||||    
T  3157149 ttttgaaatcggggaaaacctaaacccatacccaaaccaagtcaaagcggggaaaacc-gacaaattaggtttggttcgggcgggta 3157234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 26623034 - 26623123
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    ||||||||||| ||||||||| ||||| | | |||||||  |||||||||| | | ||| |||||||||| ||||| |||||||||||||    
T  26623034 acccaaacccactcaaaacggggaaaatccgacaaaatgaatttggttcggaccgataaacacgggtatgagttttgttgtcatgcctac 26623123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 27063204 - 27063321
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||||||||||  |||||| |||||||||||||||||||||||||| | | ||||| | ||||||  ||| |||||| |||  |||| ||| ||| | |     
T  27063204 ttttgaaatcgaggaaaactcaaactcatacccaaacccagtcaaatcagggaaaatccgtcaaatcggggttggtttgggagggtacccatgggcacga 27063303  T
Q  151 gttttattgtcatgccta 168  Q
    ||||| ||||||||||||    
T  27063304 gttttgttgtcatgccta 27063321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 42908068 - 42908023
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||    
T  42908068 ttttgaaatcggggaaaacccaaactcatacccaaacccaatcaaa 42908023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 3920621 - 3920706
Alignment:
Q  80 acccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||||||||||||||||  ||||||  ||||| |||||||||||||||  ||||   |||| |||| ||||| ||||||||||||    
T  3920621 acccaaacccagtcaaaacgggaaaaacccatcaaattgggtttggttcgggtgggta---acggatatgagttttgttgtcatgccta 3920706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 23457156 - 23457242
Alignment:
Q  82 ccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||||||||||||| ||| ||||||| |||||| ||||||||||||| |  |||| || |||||||| ||||| ||  ||||||||    
T  23457156 ccaaacccagtcaaagcggggaaaacccgtcaaattgggtttggttcgagagggtacccgcgggtatgagttttgtttacatgccta 23457242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 19440017 - 19439932
Alignment:
Q  83 caaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||||||||| ||| ||||||| |||||| ||||||||||||| |  |||| || ||||||||| |||| ||  ||||||||    
T  19440017 caaacccagtcaaagcggggaaaacccgtcaaattgggtttggttcgagagggtacccgcgggtatggtttttgtttacatgccta 19439932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 22973454 - 22973499
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    |||||||||||  |||||||||||| ||||||||||||||||||||    
T  22973454 ttttgaaatcgtggaaaacccaaacccatacccaaacccagtcaaa 22973499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 25979964 - 25979923
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaaccca 72  Q
    ||||||||||||||||| |||||||||||||| |||||||||    
T  25979964 ttacccgtctcatacctgtgttttgaaatcggggaaaaccca 25979923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 27896522 - 27896457
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    ||||||||| ||||||  |||||||||||  | |||||||||||| |||||||||||||| |||||    
T  27896522 ttacccgtcccatacccatgttttgaaataagggaaaacccaaacccatacccaaacccaatcaaa 27896457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 31426054 - 31426119
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    ||||||||||||||||  | |||| ||||||| ||||||||||||  ||||| |||||||||||||    
T  31426054 ttacccgtctcatacccgtatttttaaatcggggaaaacccaaaccaataccaaaacccagtcaaa 31426119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 41103706 - 41103820
Alignment:
Q  35 ccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctg 134  Q
    ||||| ||||||  |||||||||||||| |||||||||      |||||| |||||||||||||||  |||| | ||||||  || ||||||||| || |    
T  41103706 ccgtcccatacccgtgttttgaaatcggggaaaaccca------tacccacacccagtcaaaacgggaaaaatccgtcaaatcggatttggttcgcgcgg 41103799  T
Q  135 gtaaccacgggtatgggtttt 155  Q
    |||||||| |||||| |||||    
T  41103800 gtaaccacaggtatgagtttt 41103820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 33841124 - 33841207
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    ||||||||| ||||||  |||||||||||||| |||||| |||| |||||| |||| ||||||||| |||  |||||| ||||||    
T  33841124 ttacccgtcccatacccgtgttttgaaatcggggaaaactcaaattcatactcaaa-ccagtcaaagcgggaaaaacccgtcaaa 33841207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 44845159 - 44845107
Alignment:
Q  54 tgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaa 106  Q
    ||||||||| |||||||||||| |||||| |||| ||||||||||||| ||||    
T  44845159 tgaaatcggggaaaacccaaacccataccaaaactcagtcaaaacggaaaaaa 44845107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 10995881 - 10995830
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacc 82  Q
    ||||||||| ||||||  ||| |||||||||| |||||||||||||||||||    
T  10995881 ttacccgtcccatacccgtgtcttgaaatcggggaaaacccaaactcatacc 10995830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 43218352 - 43218394
Alignment:
Q  54 tgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    |||||| || |||||||||||| ||||||||||||||||||||    
T  43218352 tgaaattggggaaaacccaaacccatacccaaacccagtcaaa 43218394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 18684040 - 18684085
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaa 96  Q
    |||||||||||| |||||||| ||| |||||||||||| |||||||    
T  18684040 ttttgaaatcggggaaaacccgaacccatacccaaacctagtcaaa 18684085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 43550424 - 43550339
Alignment:
Q  83 caaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||||||| |||||| || ||||||| |||||| | |||||| ||| | | |||| |||||| |||| ||||| ||||||||||||    
T  43550424 caaacccaatcaaaatggggaaaacccgtcaaattaggtttgattcagacgggtatccacggatatgagttttgttgtcatgccta 43550339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 90642 - 90756
Alignment:
Q  35 ccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctg 134  Q
    ||||||||||||  |||||||||||||| |||||||||      |||||||||||||||||||||| ||||| | |||||| || |||| |||||||| |    
T  90642 ccgtctcatacccgtgttttgaaatcggggaaaaccca------tacccaaacccagtcaaaacggggaaaatccgtcaaattgagtttagttcgggcgg 90735  T
Q  135 gtaaccacgggtatgggtttt 155  Q
    ||||||||||||||| |||||    
T  90736 gtaaccacgggtatgagtttt 90756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 14230 - 14098
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||  ||||||  |||||| ||||||| |||||| ||||||||||||||||||||  ||||||||  |||||| |||||| ||||||||||| ||    
T  14230 ttacccgttccatacccgtgtttt-aaatcggggaaaactcaaactcatacccaaacccaaacaaaacgggaaaaacccgtcaaattgggtttggtttgg 14132  T
Q  131 gctggtaaccacgggtatgggttttattgtcatg 164  Q
    |  |||||||||| ||||| ||||| ||||||||    
T  14131 gtgggtaaccacgagtatgagttttgttgtcatg 14098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 10372 - 10468
Alignment:
Q  72 aaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    |||| |||||||||||| |||||||||||| |||||| |||||| ||| |||||||||| | ||||||| |  ||||||||||| ||||||||||||    
T  10372 aaacccatacccaaacctagtcaaaacggaaaaaacccgtcaaattggatttggttcggacaggtaaccgcatgtatgggttttgttgtcatgccta 10468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 311 - 401
Alignment:
Q  77 catacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgggttttattgtcatgccta 168  Q
    ||||||||||| |||||||||||||||||||| ||| || || ||||||||| ||| ||||| ||||| |||||||||| ||||||||||||    
T  311 catacccaaactcagtcaaaacggagaaaacccgtc-aattgagtttggttctggcgggtaatcacggatatgggttttgttgtcatgccta 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 7738 - 7875
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgg 130  Q
    ||||||||||||||||  ||||||||||| || ||||| | || | ||||||||||| || ||||||||| ||||||| |||||| |   ||| ||||||    
T  7738 ttacccgtctcatacccgtgttttgaaattggagaaaatctaa-cacatacccaaactcaatcaaaacggggaaaacccgtcaaattaaatttagttcgg 7836  T
Q  131 gctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |  ||||||||||||||||| |||| ||| |||||||||    
T  7837 gtgggtaaccacgggtatggattttgttggcatgcctac 7875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 33434 - 33578
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaaccca------gtcaaaacggagaaaaccagtcaaaatgggtttg 124  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||| ||||||||||||||       |||||||||  |||||| |||||| || ||||     
T  33434 ttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaaacccgatcaaaacgggtaaaacccgtcaaattgagttta 33533  T
Q  125 gttcgggctggtaaccacgggtatgggttttattgtcatgcctac 169  Q
    |||| ||  ||||||||||| ||| |||||| ||| |||||||||    
T  33534 gttcaggtgggtaaccacggatataggttttgttgccatgcctac 33578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 3030 - 3081
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggag 102  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  3030 ttttgaaatcggggaaaacccaaactcatacccaaacccagtcaaatcggag 3081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 14906 - 14972
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcataccc-aaacccagtcaaaacggagaaaaccagtcaa 114  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||| |||||    
T  14906 tgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaagcggagaaaacccgtcaa 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 211405 - 211476
Alignment:
Q  31 ttacccgtctcatacctttgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggag 102  Q
    ||||||||||| ||||  | |||||||||||| |||||||||||| ||||||||||| |||||||| |||||    
T  211405 ttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtcaaatcggag 211476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 14834 - 14900
Alignment:
Q  49 tgttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||| || ||||||    
T  14834 tgttttgaaatcggagaaaacccaaactcatacccaaatccagtgaaaactgaaaaaccccgtcaaa 14900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 67810 - 67927
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||| ||||||| ||||| |||||| ||||| |||||||||||||| ||| ||||||| ||||||  ||| |||||| |||| ||||  || ||| | ||    
T  67810 ttttaaaatcggggaaaatccaaacccatactcaaacccagtcaaatcggggaaaacctgtcaaatcggggttggtttgggcgggtactcatgggcacgg 67909  T
Q  151 gttttattgtcatgccta 168  Q
    ||||| ||| ||||||||    
T  67910 gttttgttgccatgccta 67927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 75653 - 75770
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaaatgggtttggttcgggctggtaaccacgggtatgg 150  Q
    |||| ||||||| ||||| |||||| ||||| |||||||||||||| ||| ||||||| ||||||  ||| |||||| |||| ||||  || ||| | ||    
T  75653 ttttaaaatcggggaaaatccaaacccatactcaaacccagtcaaatcggggaaaacctgtcaaatcggggttggtttgggcgggtactcatgggcacgg 75752  T
Q  151 gttttattgtcatgccta 168  Q
    ||||| ||| ||||||||    
T  75753 gttttgttgccatgccta 75770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 449768 - 449813
Alignment:
Q  56 aaatcggtgaaaacccaaactcatacccaaacccagtcaaaacgga 101  Q
    ||||||| |||||||||||| || ||||||||||||||||| ||||    
T  449768 aaatcggggaaaacccaaacccaaacccaaacccagtcaaagcgga 449813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 4608 - 4545
Alignment:
Q  51 ttttgaaatcggtgaaaacccaaactcatacccaaacccagtcaaaacggagaaaaccagtcaaa 115  Q
    ||||||||| || ||||||| |||||||||| ||||| |||| |||||||| ||||||| |||||    
T  4608 ttttgaaattggggaaaacc-aaactcatactcaaactcagttaaaacggataaaaccaatcaaa 4545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 5499 times since January 2019
Visitors: 5757