View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0802_high_14 (Length: 357)
Name: NF0802_high_14
Description: NF0802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0802_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 10 - 351
Target Start/End: Original strand, 32924526 - 32924867
Alignment:
| Q |
10 |
attattctgtattataatttttgtttatattttcatcttgcagatattcatgatatattctactaaatcaatacatatttttgttttaaataagtcatga |
109 |
Q |
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| T |
32924526 |
attatactgtattataatttttgtttatattttcatcttgtagatattcaagatatatactactaaataaatacatatttttgttttaaataagtcatga |
32924625 |
T |
|
| Q |
110 |
aagaccgtcttttaactaacatagcagtgaaaacacttgtctcatgtaaaatttatagtaaattgtaatcagtgcataatacacttgaagtactagatta |
209 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32924626 |
aagactgtcttttaactaacatagcagtgaaaacacttgtctcatgtaaaatttatagtaaattgtaatcagtgcataatacacttgaagtactagatta |
32924725 |
T |
|
| Q |
210 |
nnnnnnntgagagattagctttgtaaccttaaggtacaaagaatgatgaaatgaaataaatttcgttggcgtaaaaaataatccttctgatcttacattt |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
32924726 |
gggggggtgagagattagctttgtaaccttaaggtacaaagaatgatgaaatgaaataaattttgttggcgtaaaaaataatccttctgatcttacattt |
32924825 |
T |
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| Q |
310 |
gaacctttattttcatgtgattactcttatagtcttaatatg |
351 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
32924826 |
gaacctttattttcatgtgattactcttatagtcttaatatg |
32924867 |
T |
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