View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0802_high_15 (Length: 356)
Name: NF0802_high_15
Description: NF0802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0802_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 29 - 347
Target Start/End: Complemental strand, 37846803 - 37846485
Alignment:
| Q |
29 |
aaaatggaaattggggaccatacacttgcactttaaaaagggaatatattgcacagaaacctcattcaaatcgatcaggatatatttgtacaaacctgta |
128 |
Q |
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| T |
37846803 |
aaaatggaaattggggaccatacacttgcactttaaaaagggaatatattgcacagaaacctcattcaaatcgatcaggatatatttgtacaaacctgta |
37846704 |
T |
|
| Q |
129 |
ctggaattaagttttacgtgtcgacaccctgtgtggcttgtggagattttcttgtaccctatcgagtgaatatatgatttggcaatgaggtttgcacnnn |
228 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37846703 |
ctggaattaagttttacgtgtcgacaccctgtgtggcttgtggagattttcttgtaccctatcgagtgaatatatgatttggcaatgaggtttgcacttt |
37846604 |
T |
|
| Q |
229 |
nnnnctattgctacttaacaaaactggtaaggtggaatcgtctatgccaaggtgtagccatcatgtcatgtgttaagaaaaaatatatatgattcgaaac |
328 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37846603 |
ttttctattgctacttaacaaaacaggtaaggtggaatcgtctatgccaaggtgtagccatcatgtcatgtgttaagaaaaaatatatatgattcgaaac |
37846504 |
T |
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| Q |
329 |
cactactttgtagaataat |
347 |
Q |
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||||||||||||||||||| |
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| T |
37846503 |
cactactttgtagaataat |
37846485 |
T |
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