View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0802_high_16 (Length: 326)

Name: NF0802_high_16
Description: NF0802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0802_high_16
NF0802_high_16
[»] chr4 (51 HSPs)
chr4 (169-326)||(3909820-3909977)
chr4 (98-169)||(19865572-19865643)
chr4 (98-173)||(12237350-12237425)
chr4 (98-170)||(3798725-3798797)
chr4 (98-170)||(5669627-5669699)
chr4 (98-170)||(33410891-33410963)
chr4 (98-169)||(18910604-18910675)
chr4 (98-168)||(19861216-19861286)
chr4 (98-169)||(9716951-9717022)
chr4 (98-169)||(37104170-37104241)
chr4 (98-170)||(56198028-56198100)
chr4 (98-169)||(5721900-5721971)
chr4 (98-169)||(15431164-15431235)
chr4 (98-169)||(15437778-15437849)
chr4 (231-309)||(27417518-27417596)
chr4 (227-304)||(16622936-16623012)
chr4 (224-304)||(25861675-25861755)
chr4 (98-169)||(15405827-15405898)
chr4 (227-302)||(16628517-16628591)
chr4 (98-169)||(47114776-47114847)
chr4 (98-169)||(56194722-56194793)
chr4 (227-319)||(36314856-36314949)
chr4 (227-319)||(36329065-36329158)
chr4 (254-304)||(46570116-46570166)
chr4 (227-304)||(8689139-8689215)
chr4 (227-304)||(34570759-34570836)
chr4 (254-314)||(41639082-41639143)
chr4 (231-304)||(6655484-6655557)
chr4 (227-304)||(37740372-37740449)
chr4 (227-302)||(3777927-3778001)
chr4 (224-314)||(6743046-6743137)
chr4 (224-322)||(24968837-24968936)
chr4 (100-170)||(27013228-27013299)
chr4 (254-304)||(5148082-5148132)
chr4 (254-304)||(5268842-5268892)
chr4 (227-301)||(29254243-29254317)
chr4 (254-319)||(50674436-50674502)
chr4 (227-308)||(54867557-54867638)
chr4 (239-304)||(9927818-9927883)
chr4 (100-170)||(3718335-3718405)
chr4 (98-169)||(33926121-33926192)
chr4 (254-304)||(12745788-12745838)
chr4 (100-169)||(12782106-12782175)
chr4 (100-169)||(44164001-44164071)
chr4 (231-304)||(26363793-26363866)
chr4 (255-304)||(52095733-52095782)
chr4 (232-304)||(5143644-5143715)
chr4 (98-169)||(29323979-29324050)
chr4 (254-302)||(36994308-36994356)
chr4 (98-169)||(44809833-44809904)
chr4 (230-302)||(54200254-54200326)
[»] chr7 (41 HSPs)
chr7 (185-326)||(496297-496439)
chr7 (98-169)||(26556510-26556581)
chr7 (98-170)||(4542073-4542145)
chr7 (98-169)||(10431386-10431457)
chr7 (98-169)||(2442206-2442277)
chr7 (224-304)||(47676478-47676558)
chr7 (98-169)||(48645850-48645921)
chr7 (204-298)||(48491330-48491424)
chr7 (254-326)||(6570316-6570389)
chr7 (227-304)||(18126390-18126467)
chr7 (227-304)||(47674288-47674365)
chr7 (204-304)||(48489176-48489276)
chr7 (98-169)||(16164889-16164960)
chr7 (98-169)||(48644616-48644687)
chr7 (227-304)||(2761647-2761724)
chr7 (229-304)||(23554786-23554862)
chr7 (227-302)||(14070178-14070253)
chr7 (227-302)||(14380206-14380281)
chr7 (229-304)||(21983623-21983697)
chr7 (254-319)||(2647323-2647389)
chr7 (228-304)||(27347669-27347745)
chr7 (98-169)||(6602621-6602692)
chr7 (100-170)||(45288069-45288139)
chr7 (227-301)||(4585910-4585984)
chr7 (254-300)||(26417063-26417109)
chr7 (254-308)||(29990797-29990851)
chr7 (100-169)||(45291405-45291474)
chr7 (227-304)||(1113402-1113479)
chr7 (255-304)||(19495717-19495766)
chr7 (273-314)||(30026391-30026432)
chr7 (254-302)||(33332094-33332142)
chr7 (232-304)||(44847768-44847839)
chr7 (100-169)||(17729973-17730042)
chr7 (100-169)||(20081571-20081640)
chr7 (254-304)||(24515132-24515182)
chr7 (267-304)||(2479753-2479790)
chr7 (227-304)||(21989286-21989362)
chr7 (229-326)||(35853635-35853737)
chr7 (229-304)||(4178521-4178597)
chr7 (140-172)||(13450736-13450768)
chr7 (227-314)||(46515939-46516027)
[»] chr8 (28 HSPs)
chr8 (184-319)||(1345671-1345809)
chr8 (98-169)||(18722239-18722310)
chr8 (98-170)||(25592429-25592501)
chr8 (98-165)||(25595614-25595681)
chr8 (98-170)||(33878167-33878239)
chr8 (228-304)||(30143088-30143164)
chr8 (98-169)||(23612569-23612640)
chr8 (254-326)||(10014882-10014955)
chr8 (231-319)||(42435558-42435647)
chr8 (254-302)||(11383536-11383584)
chr8 (105-172)||(10663008-10663075)
chr8 (258-319)||(4743569-4743632)
chr8 (101-169)||(14589748-14589816)
chr8 (224-304)||(12702980-12703061)
chr8 (227-304)||(15212532-15212609)
chr8 (227-304)||(33351896-33351973)
chr8 (227-304)||(43036169-43036246)
chr8 (229-308)||(17982395-17982475)
chr8 (98-169)||(43682726-43682798)
chr8 (227-308)||(23799214-23799295)
chr8 (254-304)||(34254700-34254750)
chr8 (202-326)||(3051474-3051599)
chr8 (254-314)||(4696259-4696320)
chr8 (98-170)||(22174820-22174892)
chr8 (229-304)||(1746564-1746640)
chr8 (229-308)||(31217999-31218079)
chr8 (227-304)||(5702122-5702199)
chr8 (229-308)||(19948667-19948747)
[»] chr6 (30 HSPs)
chr6 (191-326)||(26954612-26954748)
chr6 (98-170)||(23379743-23379815)
chr6 (98-165)||(23389082-23389149)
chr6 (228-319)||(31979896-31979988)
chr6 (98-169)||(31071494-31071565)
chr6 (227-304)||(5017138-5017215)
chr6 (254-316)||(24435601-24435664)
chr6 (254-308)||(5406570-5406624)
chr6 (254-308)||(5410895-5410949)
chr6 (227-304)||(18234461-18234538)
chr6 (234-304)||(26661477-26661547)
chr6 (234-304)||(26767448-26767518)
chr6 (231-308)||(21593190-21593267)
chr6 (227-308)||(33211530-33211611)
chr6 (229-304)||(33160700-33160776)
chr6 (254-304)||(5413820-5413870)
chr6 (254-304)||(9183382-9183432)
chr6 (254-304)||(10076833-10076883)
chr6 (254-304)||(16452812-16452862)
chr6 (254-304)||(31086115-31086165)
chr6 (254-326)||(21272608-21272681)
chr6 (254-302)||(5407280-5407328)
chr6 (254-302)||(5411605-5411653)
chr6 (229-304)||(22964078-22964153)
chr6 (229-304)||(23824240-23824315)
chr6 (228-304)||(30834881-30834959)
chr6 (254-308)||(5571902-5571956)
chr6 (105-170)||(5739125-5739191)
chr6 (254-304)||(16452701-16452751)
chr6 (254-304)||(31405046-31405096)
[»] scaffold0334 (1 HSPs)
scaffold0334 (98-169)||(18463-18534)
[»] scaffold0035 (1 HSPs)
scaffold0035 (98-169)||(61597-61668)
[»] chr5 (29 HSPs)
chr5 (98-169)||(42061486-42061557)
chr5 (98-170)||(28442110-28442182)
chr5 (98-169)||(14376763-14376834)
chr5 (98-169)||(31862872-31862943)
chr5 (227-304)||(14520608-14520684)
chr5 (227-308)||(19806148-19806229)
chr5 (227-304)||(32636570-32636647)
chr5 (224-304)||(11916614-11916694)
chr5 (231-304)||(5057577-5057650)
chr5 (227-304)||(13487949-13488026)
chr5 (224-304)||(12083820-12083899)
chr5 (227-303)||(16649968-16650044)
chr5 (254-308)||(31004792-31004846)
chr5 (227-304)||(16650967-16651044)
chr5 (231-304)||(27015060-27015133)
chr5 (227-304)||(42426580-42426657)
chr5 (229-304)||(13239498-13239574)
chr5 (100-169)||(21336672-21336742)
chr5 (229-304)||(36074390-36074466)
chr5 (254-304)||(535649-535699)
chr5 (100-169)||(21827971-21828041)
chr5 (254-304)||(25412508-25412558)
chr5 (254-304)||(30182334-30182384)
chr5 (254-304)||(37438892-37438942)
chr5 (254-308)||(39468904-39468958)
chr5 (227-280)||(533539-533592)
chr5 (98-170)||(14016965-14017037)
chr5 (232-304)||(9352977-9353048)
chr5 (258-302)||(38746535-38746579)
[»] chr3 (49 HSPs)
chr3 (98-169)||(10107543-10107614)
chr3 (98-169)||(17532598-17532669)
chr3 (98-169)||(52198305-52198376)
chr3 (98-170)||(10884017-10884089)
chr3 (98-170)||(23299482-23299554)
chr3 (98-169)||(18645670-18645741)
chr3 (231-304)||(4569479-4569552)
chr3 (227-304)||(29810614-29810691)
chr3 (228-308)||(8370117-8370196)
chr3 (98-169)||(538015-538086)
chr3 (98-169)||(6921890-6921961)
chr3 (204-304)||(5236779-5236879)
chr3 (229-304)||(29812809-29812884)
chr3 (256-314)||(46173250-46173309)
chr3 (227-308)||(1735931-1736012)
chr3 (254-319)||(54593216-54593282)
chr3 (224-304)||(8127005-8127085)
chr3 (227-304)||(27027084-27027160)
chr3 (228-304)||(47923535-47923611)
chr3 (254-304)||(7762010-7762060)
chr3 (262-308)||(7764194-7764240)
chr3 (231-304)||(31340608-31340682)
chr3 (227-304)||(36029471-36029548)
chr3 (254-304)||(40734244-40734294)
chr3 (254-308)||(40845058-40845112)
chr3 (100-169)||(53814971-53815040)
chr3 (254-304)||(55302555-55302605)
chr3 (227-304)||(16264727-16264803)
chr3 (254-303)||(21711606-21711655)
chr3 (227-304)||(30709428-30709505)
chr3 (229-304)||(9636474-9636550)
chr3 (232-304)||(37726058-37726129)
chr3 (232-304)||(43404301-43404373)
chr3 (254-312)||(24694788-24694847)
chr3 (227-312)||(40592404-40592490)
chr3 (254-304)||(5260695-5260745)
chr3 (254-304)||(6096190-6096240)
chr3 (100-169)||(29344703-29344773)
chr3 (254-304)||(34490760-34490810)
chr3 (254-304)||(37408205-37408255)
chr3 (227-304)||(40735175-40735252)
chr3 (254-304)||(49200041-49200091)
chr3 (100-169)||(54460367-54460436)
chr3 (100-168)||(9380012-9380080)
chr3 (227-304)||(39032187-39032263)
chr3 (231-304)||(43402357-43402430)
chr3 (254-304)||(53921856-53921908)
chr3 (229-304)||(5258490-5258566)
chr3 (271-326)||(44331292-44331348)
[»] chr1 (32 HSPs)
chr1 (98-169)||(49499497-49499568)
chr1 (98-169)||(1951274-1951345)
chr1 (185-308)||(15820049-15820172)
chr1 (254-326)||(46064641-46064714)
chr1 (98-170)||(2793298-2793370)
chr1 (227-307)||(28220571-28220651)
chr1 (98-169)||(31204014-31204085)
chr1 (227-312)||(4552993-4553079)
chr1 (254-319)||(29135780-29135846)
chr1 (227-304)||(29652191-29652268)
chr1 (254-319)||(13547679-13547744)
chr1 (254-319)||(13549590-13549655)
chr1 (254-326)||(16455369-16455442)
chr1 (227-319)||(49918079-49918172)
chr1 (227-307)||(28223766-28223846)
chr1 (224-304)||(31658984-31659064)
chr1 (227-302)||(1833270-1833345)
chr1 (98-169)||(6071829-6071895)
chr1 (227-301)||(10924972-10925046)
chr1 (227-304)||(13598778-13598855)
chr1 (227-304)||(37070145-37070222)
chr1 (204-302)||(44454907-44455005)
chr1 (231-308)||(193136-193213)
chr1 (227-304)||(21536213-21536289)
chr1 (232-304)||(13604265-13604336)
chr1 (227-302)||(3282085-3282159)
chr1 (227-302)||(30476793-30476868)
chr1 (254-304)||(11348247-11348297)
chr1 (254-304)||(37033659-37033709)
chr1 (254-308)||(37879481-37879535)
chr1 (100-169)||(41059164-41059234)
chr1 (256-304)||(13316692-13316740)
[»] chr2 (32 HSPs)
chr2 (98-169)||(15466170-15466241)
chr2 (98-169)||(36809364-36809435)
chr2 (98-169)||(38006215-38006286)
chr2 (98-170)||(26358671-26358743)
chr2 (98-169)||(25821847-25821922)
chr2 (98-170)||(25873202-25873274)
chr2 (227-312)||(36318354-36318440)
chr2 (227-304)||(34389229-34389305)
chr2 (98-166)||(36985664-36985732)
chr2 (98-169)||(25869835-25869906)
chr2 (227-319)||(21630323-21630416)
chr2 (98-170)||(45456299-45456371)
chr2 (98-169)||(30275620-30275691)
chr2 (98-169)||(45453051-45453122)
chr2 (227-319)||(20522600-20522693)
chr2 (227-304)||(2837189-2837266)
chr2 (224-304)||(23078114-23078193)
chr2 (232-304)||(28258820-28258891)
chr2 (229-304)||(45099501-45099577)
chr2 (254-304)||(5723626-5723676)
chr2 (227-304)||(10706895-10706971)
chr2 (224-304)||(14698651-14698731)
chr2 (229-304)||(36988421-36988497)
chr2 (254-304)||(2334789-2334839)
chr2 (100-169)||(10599951-10600020)
chr2 (254-304)||(39483281-39483331)
chr2 (227-280)||(39284655-39284708)
chr2 (229-304)||(4503478-4503554)
chr2 (98-169)||(29439597-29439666)
chr2 (254-302)||(33118540-33118588)
chr2 (254-302)||(35447473-35447521)
chr2 (98-169)||(38014636-38014707)
[»] scaffold0045 (1 HSPs)
scaffold0045 (98-169)||(88965-89036)
[»] scaffold1684 (1 HSPs)
scaffold1684 (98-169)||(403-474)
[»] scaffold0005 (1 HSPs)
scaffold0005 (98-158)||(290974-291034)
[»] scaffold0286 (1 HSPs)
scaffold0286 (231-304)||(11086-11159)
[»] scaffold0014 (1 HSPs)
scaffold0014 (231-304)||(80850-80923)
[»] scaffold0381 (1 HSPs)
scaffold0381 (100-170)||(6484-6555)
[»] scaffold0757 (1 HSPs)
scaffold0757 (100-169)||(4563-4632)
[»] scaffold0006 (3 HSPs)
scaffold0006 (254-304)||(2898-2948)
scaffold0006 (227-304)||(6063-6140)
scaffold0006 (232-304)||(132922-132993)
[»] scaffold0176 (1 HSPs)
scaffold0176 (254-302)||(17636-17684)
[»] scaffold0466 (1 HSPs)
scaffold0466 (254-304)||(6855-6905)
[»] scaffold0140 (1 HSPs)
scaffold0140 (254-304)||(8060-8110)
[»] scaffold0066 (1 HSPs)
scaffold0066 (254-308)||(20787-20841)
[»] scaffold0098 (1 HSPs)
scaffold0098 (232-304)||(45582-45653)
[»] scaffold0087 (2 HSPs)
scaffold0087 (232-304)||(36475-36546)
scaffold0087 (232-304)||(43604-43675)
[»] scaffold0016 (1 HSPs)
scaffold0016 (233-304)||(114332-114404)


Alignment Details
Target: chr4 (Bit Score: 142; Significance: 2e-74; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 169 - 326
Target Start/End: Complemental strand, 3909977 - 3909820
Alignment:
Q  169 acctctcgttactgtatctctcaaaaatgagctgaaacacttgaatagtcctttgcaactgtcaaaatcatgtcacgttttctagaatcgtgacacggtt 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3909977 acctctcgttactgtatctctcaaaaatgagctgaaacacttgaatagtcctttgcaactgtcaaaatcatgtcacgttttctaaaatcgtgacacggtt 3909878  T
Q  269 gatgcgtacgactcaaagtacgaccaaccttatcctaaaacgtgccaagcatgccaaa 326  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  3909877 gatgcgtacgactcaaggtacgaccaaccttatcttaaaacgtgccaaacatgccaaa 3909820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 19865572 - 19865643
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19865572 gtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 19865643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 12237425 - 12237350
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcacctc 173  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  12237425 gtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgaatgactatcatcacctc 12237350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 3798725 - 3798797
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3798725 gtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 3798797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 5669699 - 5669627
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  5669699 gtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 5669627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 33410891 - 33410963
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  33410891 gtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 33410963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 18910675 - 18910604
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    ||||||| |||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  18910675 gtttaagtttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 18910604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 19861216 - 19861286
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatc 168  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  19861216 gtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgtctgccatc 19861286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 9717022 - 9716951
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  9717022 gtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgaccgactgtcatca 9716951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 37104170 - 37104241
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||| ||||||||    
T  37104170 gtttaagcttgcttgtgaactcaaaatatcatgaaaatgatactaaacacagtgaatgactgagtgtcatca 37104241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 56198100 - 56198028
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||| |  ||||||||||||||||||||    
T  56198100 gtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataacgaatgactgactgtcatcac 56198028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 5721900 - 5721971
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||  ||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  5721900 gtttaagcttgtttgtgaacttgaaatatcatgaaaatgacactaaaaacagtgaatgactgattgtcatca 5721971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 15431235 - 15431164
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| ||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||    
T  15431235 gtttaaacttgcttgtgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15431164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 15437849 - 15437778
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| ||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||    
T  15437849 gtttaaacttgcttgtgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15437778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 27417518 - 27417596
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaac 309  Q
    ||||||| ||||||| ||||   ||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  27417518 caaaatcgtgtcacgatttcccaaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaac 27417596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 16623012 - 16622936
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||||| | |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  16623012 ctgtcaaaatcgtgtcacgttttcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 16622936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 25861755 - 25861675
Alignment:
Q  224 caactgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||| |||||||||| || | |||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  25861755 caactgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattgatgcgtacgacccaaggtacgaccaaccttatcct 25861675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 15405827 - 15405898
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||| |  |||||||||||| ||||||    
T  15405827 gtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactgactttcatca 15405898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 16628591 - 16628517
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    ||||||||||| |||||||||||| | |||||||||||| ||| |||||||||| ||| |||||||||||||||||    
T  16628591 ctgtcaaaatcgtgtcacgttttcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatc 16628517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 47114847 - 47114776
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| |  ||||||||||||||||||| |  |||||||||||||||||||    
T  47114847 gtttaagcttgcttgtgaactcaaaacataatgaaaatgacactaaaaataaagaatgactgactgtcatca 47114776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 56194793 - 56194722
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||| |  |||||| ||||||||||||    
T  56194793 gtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataacgaatgattgactgtcatca 56194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 36314949 - 36314856
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    ||||||||||| |||||||||| || | |||||||||||| ||| |||||||||| ||| ||||||||||||||||||| |||||||||| ||||    
T  36314949 ctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagca 36314856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 36329158 - 36329065
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    ||||||||||| |||||||||| || | |||||||||||| ||| |||||||||| ||| ||||||||||||||||||| |||||||||| ||||    
T  36329158 ctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagca 36329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 46570116 - 46570166
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  46570116 aatcgtgacacgtttgatgcgtacgacccaaagtacgaccaaccttatcct 46570166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 8689215 - 8689139
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||||| | ||||||| |||| ||| |||||||||| ||| |||||||||||||||||||    
T  8689215 ctgtcaaaatcgtgtcacgttttcca-aatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcct 8689139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 34570759 - 34570836
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| ||||||||||||   |||||||||||| ||| |||||||||| ||| |||| ||||||||||||||    
T  34570759 ctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcct 34570836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 41639143 - 41639082
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgcc 314  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  41639143 aatcgtgacacagttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcc 41639082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 6655557 - 6655484
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| ||||||| ||||   |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  6655557 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcct 6655484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 37740449 - 37740372
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| ||||||||||||   |||||||||||  ||| || ||||||| ||| |||||||||||||||||||    
T  37740449 ctgtcaaaatcgtgtcacgttttcccaaatcgtgacacatttggtgtgtacgacccaaggtacgaccaaccttatcct 37740372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 3777927 - 3778001
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    ||||||||||||||||| |||||| | || |||| |||| ||| |||||||||| ||| |||||||||||||||||    
T  3777927 ctgtcaaaatcatgtcaagttttccaaaa-cgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatc 3778001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 6743137 - 6743046
Alignment:
Q  224 caactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgcc 314  Q
    |||||||||||||  ||||| ||||||   |||||||||||| ||  |||||||| | ||| ||||||||||||||||||| ||||||||||    
T  6743137 caactgtcaaaattgtgtcaagttttcccaaatcgtgacacgattagtgcgtacgtcccaaggtacgaccaaccttatcctgaaaacgtgcc 6743046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 322
Target Start/End: Complemental strand, 24968936 - 24968837
Alignment:
Q  224 caactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagcatgc 322  Q
    |||||||||| ||| ||||||| ||   | |||| || |||| |||| ||||||||| ||| ||||||||||||||||||| |||||||| |||||||||    
T  24968936 caactgtcaatatcgtgtcacgattggcaaaatcatgtcacgattgaagcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgtcaagcatgc 24968837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 27013299 - 27013228
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||||||| ||||||||||||| || ||| |||| ||| ||||||| || ||||||||||||||||||||    
T  27013299 ttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatcac 27013228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 5148082 - 5148132
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  5148082 aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 5148132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 5268892 - 5268842
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  5268892 aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 5268842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 29254317 - 29254243
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttat 301  Q
    ||||||||||| |||||||||||    |||||||||||| ||| |||||||||  |||| |||||||||||||||    
T  29254317 ctgtcaaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgatccaaaatacgaccaaccttat 29254243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 50674436 - 50674502
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    |||||||||||| ||| |||||||||| ||| |||| |||||||||||||| |||||||||| ||||    
T  50674436 aatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgtgcccagca 50674502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 54867557 - 54867638
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||||||| |||||||||| || | |||||||||||| ||| |||||||||  ||| |||||||||||||||||| ||||    
T  54867557 ctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgatccaaggtacgaccaaccttatccgaaaa 54867638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 9927818 - 9927883
Alignment:
Q  239 tgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||||   |||||||||||| ||| |||||||||| ||| | |||||||||||||||||    
T  9927818 tgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggaacgaccaaccttatcct 9927883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 3718405 - 3718335
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||||||| ||||||||||||| || ||| ||||| || ||||||| ||||||||| |||||||||||||    
T  3718405 ttaagcttgcttgtgaactcaaaaatatcataaaaat-actctaaaaatagtgaatgagtgactgtcatcac 3718335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 33926192 - 33926121
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||| | | |||| ||||||||||||||  |   ||||||||||||||||||    
T  33926192 gtttaagcttgcttgtgaactcaagacatcatgcaaatgacactaaaagtaacaaatgactgactgtcatca 33926121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 12745788 - 12745838
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| |||  ||||||||| ||| |||||||||||||||||||    
T  12745788 aatcgtgacacgattggcgcgtacgacccaaggtacgaccaaccttatcct 12745838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 12782175 - 12782106
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||| ||| ||||||||| || ||| |||||||| ||||||| || |||||||||||||||||||    
T  12782175 ttaagcttgcttgtaaactcaaaaatatcat-aaaatgactctaaaaatagcgaatgactgactgtcatca 12782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 44164071 - 44164001
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||| ||||| ||||||||||||| || ||| |||| |||  |||||| ||||||||||||||||||||||    
T  44164071 ttaatcttgcttgtgaactcaaaaatatcataaaaaagactttaaaaatagtgaatgactgactgtcatca 44164001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 26363866 - 26363793
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| ||||||| ||||   ||| |||||||| ||| |||||||||| ||| ||| |||||||||||||||    
T  26363866 caaaatcgtgtcacgatttcccaaattgtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcct 26363793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 52095733 - 52095782
Alignment:
Q  255 atcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| |||| ||||||| |||||| ||| |||||||||||||||||||    
T  52095733 atcgtgtcacgattgatgcttacgacccaaggtacgaccaaccttatcct 52095782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 5143644 - 5143715
Alignment:
Q  232 aaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| |||||||||||| | |||||||||||| ||| |||| || || ||| || ||||||||||||||||    
T  5143644 aaaatcgtgtcacgttttcca-aatcgtgacacgattggtgcgcacaacccaaggtgcgaccaaccttatcct 5143715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 29324050 - 29323979
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| || ||| |||| ||| ||||||| ||  ||||||||||||||||||    
T  29324050 gtttaagcttgcttgtgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgactgactgtcatca 29323979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 36994356 - 36994308
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    |||||||||||||||| ||||||||||  || |||||| ||||||||||    
T  36994356 aatcgtgacacggttggtgcgtacgacctaaggtacgatcaaccttatc 36994308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 44809833 - 44809904
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| || ||| |||| ||| ||||||| ||  ||||||||||||||||||    
T  44809833 gtttaagcttgcttgtgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgactgactgtcatca 44809904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 302
Target Start/End: Original strand, 54200254 - 54200326
Alignment:
Q  230 tcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    |||||||| |||||| |||||   |||||||||  | ||| |||||||||| ||| |||||||||||||||||    
T  54200254 tcaaaatcgtgtcacattttcccaaatcgtgactagtttggtgcgtacgacccaaggtacgaccaaccttatc 54200326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 185 - 326
Target Start/End: Original strand, 496297 - 496439
Alignment:
Q  185 tctctcaaaaatgagctgaaacacttgaatagtcctttgcaactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaa 284  Q
    ||||| |||||||||||||||| ||| ||||||||| |||||||||||||||| | |||||||| | | |||||||||||||||||||||||||||||||    
T  496297 tctcttaaaaatgagctgaaacgcttaaatagtcctctgcaactgtcaaaatcgtatcacgtttcccaaaatcgtgacacggttgatgcgtacgactcaa 496396  T
Q  285 agtacgaccaaccttatcct-aaaacgtgccaagcatgccaaa 326  Q
     |||   ||||||||||||| |||| ||| |||||||||||||    
T  496397 ggtaaatccaaccttatcctgaaaatgtgtcaagcatgccaaa 496439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 26556581 - 26556510
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  26556581 gtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 26556510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 4542145 - 4542073
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  4542145 gtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 4542073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 10431457 - 10431386
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  10431457 gtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 10431386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 2442206 - 2442277
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  2442206 gtttaaacttgcttgtgaactcaaaatatcatgaaaatgacacttaaaatagtgaatgactgactgtcatca 2442277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 47676478 - 47676558
Alignment:
Q  224 caactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||  |||||||||||| | |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  47676478 caactgtcaaaattgtgtcacgttttccaaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 47676558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 48645850 - 48645921
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||| |  |||||||||||||||||||    
T  48645850 gtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactgactgtcatca 48645921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 48491424 - 48491330
Alignment:
Q  204 aacacttgaatagtcctttgcaactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaacct 298  Q
    ||||||| |||||| |  ||||||| ||||||||||||||||||||    |||||||||||||||| |||||||||| ||| |||||||||||||    
T  48491424 aacacttaaatagtaccctgcaactatcaaaatcatgtcacgttttgccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaacct 48491330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 6570389 - 6570316
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagcatgccaaa 326  Q
    ||||||||||||||||||||||| ||| ||| |||||| |||||||||||| |||||||| |||||||||||||    
T  6570389 aatcgtgacacggttgatgcgtatgacccaaggtacgatcaaccttatcctaaaaacgtgtcaagcatgccaaa 6570316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 18126467 - 18126390
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||||||  |||||||||||| ||| |||||||||| ||| ||||||||||| |||||||    
T  18126467 ctgtcaaaatcgtgtcacgttttctcaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaacattatcct 18126390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 47674288 - 47674365
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||||||||| |||||| | |||||||||||| ||| ||||||| || ||| |||||||||||||||||||    
T  47674288 ctgtcaaaatcatgtcatgttttccaaaatcgtgacacgtttggtgcgtacaacccaaggtacgaccaaccttatcct 47674365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 48489276 - 48489176
Alignment:
Q  204 aacacttgaatagtcctttgcaactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcc 303  Q
    ||||||| |||||| |  ||||||||||||||||||||||||||||    |||||||||||| ||| ||||||| || ||| ||| ||||||||||||||    
T  48489276 aacacttaaatagtaccctgcaactgtcaaaatcatgtcacgttttgccaaatcgtgacacgattggtgcgtacaacccaaggtatgaccaaccttatcc 48489177  T
Q  304 t 304  Q
    |    
T  48489176 t 48489176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 16164960 - 16164889
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| | ||||||||| |||||||||| |  |||||||||||||||||||    
T  16164960 gtttaagcttgcttgtgaactcaaaacatcatgaaaattacactaaaaataacgaatgactgactgtcatca 16164889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 48644687 - 48644616
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| |  ||||||||||||||||||| |  |||||||||||||||||||    
T  48644687 gtttaagcttgcttgtgaactcaaaacattatgaaaatgacactaaaaataaagaatgactgactgtcatca 48644616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 2761647 - 2761724
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| ||||||||||||   |||||||||||| ||| |||||||||| ||| |||||||||| ||||||||    
T  2761647 ctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcct 2761724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 23554862 - 23554786
Alignment:
Q  229 gtcaaaatcatgtcacgttttctag-aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| |||||||||||| |  ||||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  23554862 gtcaaaatcgtgtcacgttttccattaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcct 23554786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 14070178 - 14070253
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    ||||||||||| ||||||||||||   |||||||||||| ||| ||| |||||| ||| |||||||||||||||||    
T  14070178 ctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatc 14070253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 14380206 - 14380281
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    ||||||||||| ||||||||||||   |||||||||||| ||| ||| |||||| ||| |||||||||||||||||    
T  14380206 ctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatc 14380281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 21983623 - 21983697
Alignment:
Q  229 gtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| |||||||||||| | |||||||||||  ||| |||||||||| ||| |||||||||||||||||||    
T  21983623 gtcaaaatcgtgtcacgttttcca-aatcgtgacacaattggtgcgtacgacccaaggtacgaccaaccttatcct 21983697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 2647389 - 2647323
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    |||||||||||| ||| |||||||||| ||| ||||||||||||||||||| |||||||||| ||||    
T  2647389 aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagca 2647323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 27347745 - 27347669
Alignment:
Q  228 tgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||| |||||| |||||   || ||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  27347745 tgtcaaaatcgtgtcacattttcccaaaccgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 27347669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 6602692 - 6602621
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| |||||||| |||| |  ||||| ||||||||||||| |  |||||||||||||||||||    
T  6602692 gtttaagcttgcttgtgaacttaaaacattatgaacatgacactaaaaataacgaatgactgactgtcatca 6602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 45288069 - 45288139
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||||||| ||||||||||||| || ||| |||| ||| ||||||| |||||||||||||||||||||||    
T  45288069 ttaagcttgcttgtgaactcaaaaatatcataaaaa-gactctaaaaatagtgaatgactgactgtcatcac 45288139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 4585984 - 4585910
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttat 301  Q
    ||||||||||| |||||| |||||   |||||||||| | ||| |||||||||| ||| ||||||||||||||||    
T  4585984 ctgtcaaaatcgtgtcacattttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttat 4585910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 26417109 - 26417063
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaacctta 300  Q
    |||||||||||||||| |||||||||| ||| |||||||||||||||    
T  26417109 aatcgtgacacggttggtgcgtacgacccaaggtacgaccaacctta 26417063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 29990851 - 29990797
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||| |||| |||||||||||||||||| |||||| ||| ||||||||||||    
T  29990851 aatcgtgccacgattgatgcgtacgactcaaggtacgatcaatcttatcctaaaa 29990797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 45291405 - 45291474
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||| ||||||||||||| || ||| |||| ||| ||||||| ||||||||||||||||||||||    
T  45291405 ttaagcttgcttgtgaactcaaaaatatcataaaaa-gactctaaaaatagtgaatgactgactgtcatca 45291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 1113479 - 1113402
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||||    |  ||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  1113479 ctgtcaaaatcgtgtcacgttttgccaatacgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 1113402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 19495766 - 19495717
Alignment:
Q  255 atcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  19495766 atcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcct 19495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 30026391 - 30026432
Alignment:
Q  273 cgtacgactcaaagtacgaccaaccttatcctaaaacgtgcc 314  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  30026391 cgtacgactcaaggtacgaccaaccttatcctgaaacgtgcc 30026432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 33332142 - 33332094
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    |||||||||||| ||| |||||||||| ||| |||||||||||||||||    
T  33332142 aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatc 33332094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 44847839 - 44847768
Alignment:
Q  232 aaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| || ||||||||| | ||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  44847839 aaaatcgtgccacgttttcca-aatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcct 44847768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 17730042 - 17729973
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||| ||||||||||||| || ||| |||| ||| ||||||| |||||| |||||||||||||||    
T  17730042 ttaagcttgcttgtgaactcaaaaatatcat-aaaaggactctaaaaatagtgaaagactgactgtcatca 17729973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 20081571 - 20081640
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||| ||||||||||||| || ||| ||||  || ||||||| ||||||||||||||||||||||    
T  20081571 ttaagcttgcttgtgaactcaaaaatatcataaaaac-actctaaaaatagtgaatgactgactgtcatca 20081640  T

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Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 24515132 - 24515182
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| |||||||||||||  ||| |||||||||||||||||||    
T  24515132 aatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcct 24515182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 304
Target Start/End: Original strand, 2479753 - 2479790
Alignment:
Q  267 ttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  2479753 ttgatgcgtacgacccaaggtacgaccaaccttatcct 2479790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 21989286 - 21989362
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||| ||||| | |||| ||||||| ||| |||||| ||| ||| |||||| ||||||||||||    
T  21989286 ctgtcaaaatcgtgtcacattttcca-aatcatgacacgattgctgcgtatgacccaaggtacgatcaaccttatcct 21989362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 326
Target Start/End: Complemental strand, 35853737 - 35853635
Alignment:
Q  229 gtcaaaatcatgtcacgtttt---ctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct--aaaacgtgccaagcatgcc 323  Q
    ||||||||| |||||||||||   ||  ||||||| |||| |||||||||||||  ||| |||||||| ||||||||||  ||||| |||| |||| |||    
T  35853737 gtcaaaatcgtgtcacgtttttttctccaatcgtgccacgattgatgcgtacgatccaaggtacgaccgaccttatcctgaaaaacttgcccagcaagcc 35853638  T
Q  324 aaa 326  Q
    |||    
T  35853637 aaa 35853635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 4178597 - 4178521
Alignment:
Q  229 gtcaaaatcatgtcacgtttt-ctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| ||||||||||| |   |||| || |||| |||||||||||||  ||| |||||||||||||||||||    
T  4178597 gtcaaaatcgtgtcacgtttttccccaatcttgccacgattgatgcgtacgatccaaggtacgaccaaccttatcct 4178521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 13450736 - 13450768
Alignment:
Q  140 ctaaaaacagtgaatgactgactgtcatcacct 172  Q
    ||||||| |||||||||||||||||||||||||    
T  13450736 ctaaaaatagtgaatgactgactgtcatcacct 13450768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 314
Target Start/End: Complemental strand, 46516027 - 46515939
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgcc 314  Q
    ||||||||||| |||||||||||    |||||||||| | ||| ||| |||||| ||| ||  ||||||||||||||| ||||||||||    
T  46516027 ctgtcaaaatcgtgtcacgttttgccaaatcgtgacatgcttggtgcatacgacccaaggtgtgaccaaccttatcctgaaaacgtgcc 46515939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 1345671 - 1345809
Alignment:
Q  184 atctctcaaaaatgagctgaaacacttgaatagtcctttgcaactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactca 283  Q
    |||||| |||||||||||||||||||| ||||||| | |||||||||||||||| |||||||||| ||| || ||||||| |||||||||||||||| ||    
T  1345671 atctctaaaaaatgagctgaaacacttaaatagtcttctgcaactgtcaaaatcgtgtcacgtttcctaaaaccgtgacatggttgatgcgtacgaccca 1345770  T
Q  284 a--agtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    |   ||||||||||||||||||| |||||||| ||||||    
T  1345771 aggtgtacgaccaaccttatcctgaaaacgtgtcaagca 1345809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 18722239 - 18722310
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18722239 gtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 18722310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 25592429 - 25592501
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  25592429 gtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcgtcac 25592501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 25595614 - 25595681
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtc 165  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  25595614 gtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaaaaacaatgaatgactgactgtc 25595681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 33878167 - 33878239
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||| ||| | ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  33878167 gtttaaactttcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 33878239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 30143164 - 30143088
Alignment:
Q  228 tgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||| |||||||||||    |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  30143164 tgtcaaaatcgtgtcacgttttgccaaatcgtgacacggttggtgcgtacgacccaaagtacgaccaaccttatcct 30143088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 23612640 - 23612569
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| ||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||    
T  23612640 gtttaaacttgcttgtgaactcaaaatctcatcaaaatgacactaaaaatagtgaatgactgactgtcatca 23612569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 10014955 - 10014882
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagcatgccaaa 326  Q
    |||||||||||| ||||||| |||||| ||| |||||||||||||||||||  |||||||||||||||||||||    
T  10014955 aatcgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaa 10014882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 42435558 - 42435647
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    ||||||||||||||| ||||   |||||||||||| ||| |||||||||| ||| ||||||||||||||||||| ||||| |||||||||    
T  42435558 caaaatcatgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgccaagca 42435647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 11383584 - 11383536
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11383584 aatcgtgacacggttgatgcgtacgacccaaagtacgaccaaccttatc 11383536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 10663075 - 10663008
Alignment:
Q  105 cttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcacct 172  Q
    ||||| ||||||||||| ||| |||||||| ||| ||||||| |||||||||||||||||||||||||    
T  10663075 cttgcttgtgaactcaacatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcacct 10663008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 4743569 - 4743632
Alignment:
Q  258 gtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct--aaaacgtgccaagca 319  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||  |||||||||||||||    
T  4743569 gtgacacggttgatgcgtacgacccacggtacgaccaaccttatcctgaaaaacgtgccaagca 4743632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 14589748 - 14589816
Alignment:
Q  101 taagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||| | ||||||||| ||| ||||||    
T  14589748 taagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataatgaatgactaactatcatca 14589816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 12702980 - 12703061
Alignment:
Q  224 caactgtcaaaatcatgtcacgtttt-ctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||| ||||||||||| |   ||||||||||||  || |||||||||| ||| |||||||||||||||||||    
T  12702980 caactgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtatggtgcgtacgacccaatgtacgaccaaccttatcct 12703061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 15212609 - 15212532
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| |||| |||||| |||||   |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  15212609 ctgtcacaatcgtgtcacattttcctaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 15212532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 33351973 - 33351896
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| ||||||||||||   |||| ||||||| ||| |||||| ||| ||| |||||||||||||||||||    
T  33351973 ctgtcaaaatcgtgtcacgttttcccaaatcatgacacgtttggtgcgtatgacccaaggtacgaccaaccttatcct 33351896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 43036246 - 43036169
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| ||||||||||||   |||||||||||| ||| |||||||||  ||| |||||| ||||||||||||    
T  43036246 ctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgatccaaggtacgatcaaccttatcct 43036169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 17982475 - 17982395
Alignment:
Q  229 gtcaaaatcatgtcacgtttt-ctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||||| ||||||||||| |   ||||||| |||| |||||||||||||  ||| |||||||||||||||||||||||    
T  17982475 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctaaaa 17982395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 43682726 - 43682798
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaa-tgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| | ||||||||||||| |||||||| ||| |||||||| |||||||||||||||| |||||    
T  43682726 gtttaaacttgcttatgaactcaaaatatcatgaaaaatgatactaaaaatagtgaatgactgactgccatca 43682798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 23799295 - 23799214
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||||||| |||||||||| || | |||||||||||  ||| |||||||||| ||| |||||||||||||||| ||||||    
T  23799295 ctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacaattggtgcgtacgacccaacgtacgaccaaccttattctaaaa 23799214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 34254700 - 34254750
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  34254700 aatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcct 34254750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 326
Target Start/End: Original strand, 3051474 - 3051599
Alignment:
Q  202 gaaacacttgaatagtcctttgcaactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttat 301  Q
    |||||||||  ||||| || |||| || |||||||  ||||||| || | | | ||||| |||| ||||||| |||||| ||| ||||||||||||||||    
T  3051474 gaaacacttatatagtactctgcagctatcaaaattgtgtcacgattgccaaattcgtgtcacgattgatgcatacgacccaatgtacgaccaaccttat 3051573  T
Q  302 cct-aaaacgtgccaagcatgccaaa 326  Q
    | | |||||||| ||| |||||||||    
T  3051574 cttgaaaacgtgtcaaacatgccaaa 3051599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 4696320 - 4696259
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgcc 314  Q
    ||||||| |||| ||| |||||||||| ||| ||||||||||||||||||| ||||||||||    
T  4696320 aatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcc 4696259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 22174820 - 22174892
Alignment:
Q  98 gtttaagcttgcatgtgaactc-aaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||||||||| ||||||||| |||| | ||||||||||||||| |||| | |||||| ||||||||||||||    
T  22174820 gtttaagcttgcttgtgaactcaaaaacatcatgaaaatgacact-aaaataatgaatggctgactgtcatcac 22174892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 1746564 - 1746640
Alignment:
Q  229 gtcaaaatcatgtcacgtttt-ctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| ||||||||||| |   ||||||| |||| |||||||||||||  ||| |||||||||||||||||||    
T  1746564 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcct 1746640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 31218079 - 31217999
Alignment:
Q  229 gtcaaaatcatgtcacgttttctag-aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||||| ||||||||||| |   ||||||| |||| |||||||||| ||  ||| |||||||||||||||||||||||    
T  31218079 gtcaaaatcgtgtcacgttttttcccaatcgtgtcacgattgatgcgtatgatccaaggtacgaccaaccttatcctaaaa 31217999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 5702199 - 5702122
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| || ||||||||    |||||||||||| ||| ||||||| |  ||| |||||||||||||||||||    
T  5702199 ctgtcaaaatcgtgacacgttttgccaaatcgtgacacgattggtgcgtacaatccaaggtacgaccaaccttatcct 5702122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 19948667 - 19948747
Alignment:
Q  229 gtcaaaatcatgtcacgtttt-ctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||||| ||||||||||| |   ||||||| |||| |||||||||||||  ||| |||||||||| |||||| |||||    
T  19948667 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaacttatcataaaa 19948747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 6e-31; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 191 - 326
Target Start/End: Original strand, 26954612 - 26954748
Alignment:
Q  191 aaaaatgagctgaaacacttgaatagtcctttgcaactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacg 290  Q
    ||||| ||| |||||||||| |||| |||| |||||||||||| ||| ||||| |||| | | ||||||||||||||||||||||||||| ||| |||||    
T  26954612 aaaaacgagttgaaacacttaaataatcctctgcaactgtcaagatcgtgtcatgtttcccaaaatcgtgacacggttgatgcgtacgacccaaggtacg 26954711  T
Q  291 accaaccttatcct-aaaacgtgccaagcatgccaaa 326  Q
    |||||||||||||| |||| ||| |||||||||||||    
T  26954712 accaaccttatcctgaaaatgtgtcaagcatgccaaa 26954748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 23379743 - 23379815
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  23379743 gtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcgtcac 23379815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 23389082 - 23389149
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtc 165  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23389082 gtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtc 23389149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 228 - 319
Target Start/End: Original strand, 31979896 - 31979988
Alignment:
Q  228 tgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    |||||||||| |||||||||| || | |||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  31979896 tgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgactcaaagtacgaccaaccttatcctgaaaacgtgcccagca 31979988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 31071565 - 31071494
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    ||||||||||||  |||||||||||| | |||||||||||||||||||| |  |||||||||||||||||||    
T  31071565 gtttaagcttgctcgtgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactgactgtcatca 31071494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 5017215 - 5017138
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||| |||| |  |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  5017215 ctgtcaaaatcgtgtcacattttttcaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 5017138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 24435664 - 24435601
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaa 316  Q
    |||||||||||||||| ||||||| || ||| ||||||||||||||||||| ||||||||||||    
T  24435664 aatcgtgacacggttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtgccaa 24435601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 5406570 - 5406624
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||| |||| |||||||||||||| ||| |||||||||||||||||||||||    
T  5406570 aatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaa 5406624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 5410895 - 5410949
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||| |||| |||||||||||||| ||| |||||||||||||||||||||||    
T  5410895 aatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaa 5410949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 18234461 - 18234538
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||| || | |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  18234461 ctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 18234538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 304
Target Start/End: Complemental strand, 26661547 - 26661477
Alignment:
Q  234 aatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||||||   ||||||||||  |||| |||||||||| ||| |||||||||||||||||||    
T  26661547 aatcatgtcacgttttcccaaatcgtgacaatgttggtgcgtacgacccaaggtacgaccaaccttatcct 26661477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 304
Target Start/End: Complemental strand, 26767518 - 26767448
Alignment:
Q  234 aatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||||||   ||||||||||  |||| |||||||||| ||| |||||||||||||||||||    
T  26767518 aatcatgtcacgttttcccaaatcgtgacaatgttggtgcgtacgacccaaggtacgaccaaccttatcct 26767448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 21593267 - 21593190
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||| |||||| |||||   |||||||||||||||| | || ||||| ||| |||||||||||||||||||||||    
T  21593267 caaaatcgtgtcacattttcccaaatcgtgacacggttggtacgaacgacccaaggtacgaccaaccttatcctaaaa 21593190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 33211530 - 33211611
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||||||| ||||| ||||| |  |||||||||| ||||| |||||||||| ||||||||||  |||| ||||||||||    
T  33211530 ctgtcaaaatcgtgtcatgttttgtcaaatcgtgacatggttggtgcgtacgacccaaagtacgataaaccatatcctaaaa 33211611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 33160700 - 33160776
Alignment:
Q  229 gtcaaaatcatgtcacgttttctag-aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||  |||||||||||| |  ||||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  33160700 gtcaaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaaccttatcct 33160776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 5413820 - 5413870
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  5413820 aatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcct 5413870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 9183382 - 9183432
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  9183382 aatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcct 9183432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 10076883 - 10076833
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  10076883 aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 10076833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 16452812 - 16452862
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  16452812 aatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcct 16452862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 31086165 - 31086115
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  31086165 aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 31086115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 21272681 - 21272608
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagcatgccaaa 326  Q
    |||| ||||||||||| |||||||||  ||| ||| ||||||||||||||| |||||||||||| |||| ||||    
T  21272681 aatcttgacacggttggtgcgtacgatccaaggtatgaccaaccttatcctgaaaacgtgccaaacatgtcaaa 21272608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 5407280 - 5407328
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    ||||||| |||| |||||||||||||| ||| |||||||||||||||||    
T  5407280 aatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatc 5407328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 5411605 - 5411653
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    ||||||| |||| |||||||||||||| ||| |||||||||||||||||    
T  5411605 aatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatc 5411653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 22964078 - 22964153
Alignment:
Q  229 gtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| ||||||||||||   ||| |||||||| |||  ||||||||  ||| |||||||||||||||||||    
T  22964078 gtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcct 22964153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 23824315 - 23824240
Alignment:
Q  229 gtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| ||||||||||||   ||| |||||||| |||  ||||||||  ||| |||||||||||||||||||    
T  23824315 gtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcct 23824240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 30834881 - 30834959
Alignment:
Q  228 tgtcaaaatcatgtcacgttttctag--aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||| ||||||||||| |    ||||||| |||| |||||||||||||  ||| |||||||||||||||||||    
T  30834881 tgtcaaaatcgtgtcacgttttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcct 30834959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 5571956 - 5571902
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||| |||| ||| |||||||||| ||| ||||||||||||||| |||||||    
T  5571956 aatcgtgtcacgattggtgcgtacgacccaaggtacgaccaaccttaacctaaaa 5571902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 5739125 - 5739191
Alignment:
Q  105 cttgcatgtgaactcaaaataacatgaaaatga-cactaaaaacagtgaatgactgactgtcatcac 170  Q
    ||||| ||||||||||| ||| ||||||||  | | ||||||| |||||||||||||||||||||||    
T  5739125 cttgcttgtgaactcaacatatcatgaaaaaaaactctaaaaatagtgaatgactgactgtcatcac 5739191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 16452701 - 16452751
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| || | |||||||||||||| ||| |||||||||||||||||||    
T  16452701 aatcgtgccatgattgatgcgtacgacccaaggtacgaccaaccttatcct 16452751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 31405046 - 31405096
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| ||||||||||||||  || |||||||||||||||||||    
T  31405046 aatcgtgccacgattgatgcgtacgacctaaggtacgaccaaccttatcct 31405096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 18534 - 18463
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18534 gtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 18463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 61668 - 61597
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  61668 gtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 61597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 6e-28; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 42061557 - 42061486
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42061557 gtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 42061486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 28442110 - 28442182
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  28442110 gtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 28442182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 14376763 - 14376834
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  14376763 gtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 14376834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 31862943 - 31862872
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||| |  |||||||||||||||||||    
T  31862943 gtttaagcttgcttgtgaactcaaaatattatgaaaatgacactaaaaataaggaatgactgactgtcatca 31862872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 14520608 - 14520684
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||||| | |||||||||||| || ||||||||||| ||| |||||||||||||||||||    
T  14520608 ctgtcaaaatcgtgtcacgttttcca-aatcgtgacacgattaatgcgtacgacccaaggtacgaccaaccttatcct 14520684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 19806229 - 19806148
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||||||| ||||||||||||   | |||||||||| ||| |||||||||| ||| |||||||||||||||||||||||    
T  19806229 ctgtcaaaatcgtgtcacgttttcccaagtcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctaaaa 19806148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 32636647 - 32636570
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||||||||||||||||   |||||||||||| ||| |||||| ||| ||| |||||||||||||||||||    
T  32636647 ctgtcaaaatcatgtcacgttttcccaaatcgtgacacgtttggtgcgtaagacccaaggtacgaccaaccttatcct 32636570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 11916694 - 11916614
Alignment:
Q  224 caactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||| |||||||||||||  |||||||| ||| ||| |||||||||| ||| ||||||||||||| |||||    
T  11916694 caactgtcaaaatcgtgtcacgttttctcaaatcgtgatacgattggtgcgtacgacccaaggtacgaccaacctgatcct 11916614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 5057650 - 5057577
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| ||||||||||||   ||| |||||||||||||||||||||||  || |||||||||||||||||||    
T  5057650 caaaatcgtgtcacgttttcccaaattgtgacacggttgatgcgtacgaccaaaggtacgaccaaccttatcct 5057577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 13488026 - 13487949
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||  ||||||||||||   |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  13488026 ctgtcaaaattgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 13487949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 12083899 - 12083820
Alignment:
Q  224 caactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||  |||||||||||| | |||||||||||| ||| ||| |||||| ||| |||||||||||||||||||    
T  12083899 caactgtcaaaattgtgtcacgttttcca-aatcgtgacacgattggtgcatacgacccaaggtacgaccaaccttatcct 12083820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 16649968 - 16650044
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcc 303  Q
    |||||||||||||||||| ||||    |||||||||||||||| |||||||||  ||| ||||||||||||||||||    
T  16649968 ctgtcaaaatcatgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 31004846 - 31004792
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    |||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||    
T  31004846 aatcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcctaaaa 31004792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 16650967 - 16651044
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||| ||||    |||||||||||||||| |||||||||  ||| |||||||||||||||||||    
T  16650967 ctgtcaaaatcgtgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcct 16651044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 27015133 - 27015060
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| ||||||| ||||   |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  27015133 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 27015060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 42426580 - 42426657
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||  ||||||||||||   |||||||||| | ||| |||||||||| ||| |||||||||||||||||||    
T  42426580 ctgtcaaaattgtgtcacgttttcccaaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatcct 42426657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 13239574 - 13239498
Alignment:
Q  229 gtcaaaatcatgtcacgttttctag-aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||  |||||||||||| |  ||||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  13239574 gtcaaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcct 13239498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 21336672 - 21336742
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||| ||||||||||||| ||  || |||| ||| ||||||| ||||||||||||||||||||||    
T  21336672 ttaagcttgcttgtgaactcaaaaatataataaaaaagactctaaaaatagtgaatgactgactgtcatca 21336742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 36074390 - 36074466
Alignment:
Q  229 gtcaaaatcatgtcacgttttctag-aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||||||||||||| |   ||||||| || | |||||||||||||  ||| |||||||||||||||||||    
T  36074390 gtcaaaatcatgtcacgttttttcccaatcgtgccatgattgatgcgtacgatccaaggtacgaccaaccttatcct 36074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 535699 - 535649
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| ||| ||| |||||| ||| |||||||||||||||||||    
T  535699 aatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcct 535649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 21827971 - 21828041
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||| || |||||||||| || ||| |||| ||| ||||||| || |||||||||||||||||||    
T  21827971 ttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 21828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 25412558 - 25412508
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| |||||||||||||  ||| |||||||||||||||||||    
T  25412558 aatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcct 25412508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 30182384 - 30182334
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| |||||||||||||  ||| |||||||||||||||||||    
T  30182384 aatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcct 30182334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 37438942 - 37438892
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| |||||||||||||| ||| ||||||| |||||||||||    
T  37438942 aatcgtgtcacgattgatgcgtacgacccaaggtacgacaaaccttatcct 37438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 39468904 - 39468958
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    |||| ||||||| ||| ||| |||||| ||| |||||||||||||||||||||||    
T  39468904 aatcatgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctaaaa 39468958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 533592 - 533539
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgac 280  Q
    ||||||||||| ||||||||||||   |||||||||||| ||| ||||||||||    
T  533592 ctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgac 533539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 14016965 - 14017037
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||||||||| ||||||||||||| || ||| |||| ||| ||||||| ||  |||||||||||||||||||    
T  14016965 gtttaagcttgcttgtgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgactgactgtcatcac 14017037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 9353048 - 9352977
Alignment:
Q  232 aaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| || ||||||||| | ||||||| |||| |||||  ||||||| ||| |||||||||||||||||||    
T  9353048 aaaatcgtgccacgttttcca-aatcgtgccacgattgatatgtacgacccaaggtacgaccaaccttatcct 9352977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 38746579 - 38746535
Alignment:
Q  258 gtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    |||||||| ||| |||||||||| ||| |||||||||||||||||    
T  38746579 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatc 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 10107543 - 10107614
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10107543 gtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 10107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 17532598 - 17532669
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  17532598 gtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtaatca 17532669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 52198376 - 52198305
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  52198376 gtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaacatagtgaatgactgactgtcatca 52198305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 10884089 - 10884017
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||| ||||| ||||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||||    
T  10884089 gtttaaacttgcttgtgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcac 10884017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 23299482 - 23299554
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||| ||||| ||||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||||    
T  23299482 gtttaaacttgcttgtgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcac 23299554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 18645670 - 18645741
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||  ||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18645670 gtttaagcttgtttgtgaacttgaaatatcatgaaaatgacactaaaaacagtgaatgactgattgtcatca 18645741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 4569552 - 4569479
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||||||||||| | || ||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  4569552 caaaatcgtgtcacgttttccacaaccgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcct 4569479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 29810691 - 29810614
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| ||||||||||||   |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  29810691 ctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 29810614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 8370196 - 8370117
Alignment:
Q  228 tgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    |||||||||| |||||||||||| | |||||||||||| ||| ||||||| || ||| |||||||||||||||||||||||    
T  8370196 tgtcaaaatcgtgtcacgttttcca-aatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaa 8370117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 538086 - 538015
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||  ||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||    
T  538086 gtttaaacttgtttgtgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 538015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 6921961 - 6921890
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| ||||||||||||||| |||||||| | | ||||||| ||||||||||||||||||||||    
T  6921961 gtttaaacttgcttgtgaactcaaaatatcatgaaaaaggctctaaaaatagtgaatgactgactgtcatca 6921890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 5236779 - 5236879
Alignment:
Q  204 aacacttgaatagtcctttgcaactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcc 303  Q
    ||||||| |||||| |  ||||| |||||||||| |||||||||||    |||||||||||| ||| |||||||||| ||| |||||||||| |||||||    
T  5236779 aacacttaaatagtaccctgcaagtgtcaaaatcgtgtcacgttttgccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaacttatcc 5236878  T
Q  304 t 304  Q
    |    
T  5236879 t 5236879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 29812884 - 29812809
Alignment:
Q  229 gtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| |||||||||||    |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  29812884 gtcaaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 29812809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 314
Target Start/End: Complemental strand, 46173309 - 46173250
Alignment:
Q  256 tcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgcc 314  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||    
T  46173309 tcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcc 46173250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 1736012 - 1735931
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||||||| |||||||||| || | |||||||||||| ||| ||||||| || ||| |||||||||||||||||||||||    
T  1736012 ctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaa 1735931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 54593282 - 54593216
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    |||||||||||| ||| |||||||||| ||| ||||||||||||||||||| |||||||||| ||||    
T  54593282 aatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgcccagca 54593216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 8127005 - 8127085
Alignment:
Q  224 caactgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||| |||||||||| || | |||||||||||||||| || ||||||| |||  ||||||||||||||||||    
T  8127005 caactgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacggttggtgtgtacgacccaagatacgaccaaccttatcct 8127085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 27027084 - 27027160
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||||| | || |||| |||| ||| |||||||||| ||| |||||||||||||||||||    
T  27027084 ctgtcaaaatcgtgtcacgttttccaaaa-cgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcct 27027160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 47923611 - 47923535
Alignment:
Q  228 tgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||| |||||||||| || | |||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  47923611 tgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattgatgcgtacaacccaaggtacgaccaaccttatcct 47923535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 7762060 - 7762010
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  7762060 aatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcct 7762010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 7764240 - 7764194
Alignment:
Q  262 cacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||    
T  7764240 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaa 7764194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 31340608 - 31340682
Alignment:
Q  231 caaaatcatgtcacgttttct-agaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||||||| ||||  | ||||||| |||| ||| |||||||||| ||| |||||||||||||||||||    
T  31340608 caaaatcatgtcacgatttcccaaaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 31340682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 36029471 - 36029548
Alignment:
Q  227 ctgtcaaaatcatgtcacgtttt-ctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||  ||||||||||| ||| || ||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  36029471 ctgtcaaaattgtgtcacgtttttcta-aaccgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 36029548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 40734294 - 40734244
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| |||||||||||||  ||| |||||||||||||||||||    
T  40734294 aatcgtgacacgattgatgcgtacgatccaaggtacgaccaaccttatcct 40734244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 40845058 - 40845112
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    |||||||||||| ||| ||||||| || ||| |||||||||||||||||||||||    
T  40845058 aatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaa 40845112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 53815040 - 53814971
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||| ||||||||||||| || ||| |||| ||| ||||||| ||||||||||||||||||||||    
T  53815040 ttaagcttgcttgtgaactcaaaaatatcataaaaa-gactctaaaaatagtgaatgactgactgtcatca 53814971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 55302555 - 55302605
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  55302555 aatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 55302605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 16264727 - 16264803
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| ||||||| |||| | ||||||| |||| ||| ||||||| || ||| |||||||||||||||||||    
T  16264727 ctgtcaaaatcgtgtcacgctttcca-aatcgtggcacgattggtgcgtaccacccaaggtacgaccaaccttatcct 16264803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 21711606 - 21711655
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcc 303  Q
    |||||||||||| ||| |||||||||| ||| ||||||||||||||||||    
T  21711606 aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcc 21711655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 30709505 - 30709428
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||||    |||||||||||| ||| |||||||||| ||| ||| |||||| ||||||||    
T  30709505 ctgtcaaaatcgtgtcacgtttttccaaatcgtgacacgattggtgcgtacgacccaaggtaagaccaatcttatcct 30709428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 9636474 - 9636550
Alignment:
Q  229 gtcaaaatcatgtcacgtttt-ctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| ||||||||||| |   ||||||| |||| |||||||||||||  ||| |||||||||||||||||||    
T  9636474 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcct 9636550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 37726058 - 37726129
Alignment:
Q  232 aaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| || ||||||||| | ||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  37726058 aaaatcgtgccacgttttcca-aatcgtgtcacgattgatacgtacgacccaatgtacgaccaaccttatcct 37726129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 43404301 - 43404373
Alignment:
Q  232 aaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| ||||||| ||||   |||||||||||| ||| |||||||||| ||| |||||||| ||||||||||    
T  43404301 aaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccgaccttatcct 43404373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 24694847 - 24694788
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtg 312  Q
    |||||||||||| ||| ||||||| || ||| ||||||||||||||||||| ||||||||    
T  24694847 aatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtg 24694788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 40592490 - 40592404
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtg 312  Q
    ||||||||||| |||||||||| || | |||||||||||| ||| || ||||||  ||| ||||||||||||||||||| ||||||||    
T  40592490 ctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgtg 40592404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 5260695 - 5260745
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||  |||||||||||||  |||||||||||||||||||||||    
T  5260695 aatcgtgccacaattgatgcgtacgatccaaagtacgaccaaccttatcct 5260745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 6096190 - 6096240
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||  ||| |||||||||| ||| |||||||||||||||||||    
T  6096190 aatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcct 6096240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 29344703 - 29344773
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||| ||||| ||||||||||||| || ||| | || ||| ||||||| ||||||||||||||||||||||    
T  29344703 ttaatcttgcttgtgaactcaaaaatatcataagaaagactctaaaaatagtgaatgactgactgtcatca 29344773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 34490810 - 34490760
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| ||| |||||||||| ||| |||| ||||||||||||||    
T  34490810 aatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcct 34490760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 37408255 - 37408205
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  37408255 aatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcct 37408205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 40735252 - 40735175
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||| || | |||| | ||||| ||| |||||||||| ||| |||||||||||||||||||    
T  40735252 ctgtcaaaatcgtgtcacgtttgtcca-aatcataacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 40735175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 49200041 - 49200091
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||  ||| |||||||||| ||| |||||||||||||||||||    
T  49200041 aatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcct 49200091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 54460436 - 54460367
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    ||||| |||| ||||||||||||| || ||| |||| ||| ||||||| ||||||||||||||||||||||    
T  54460436 ttaagattgcttgtgaactcaaaaatatcataaaaa-gactctaaaaatagtgaatgactgactgtcatca 54460367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 9380080 - 9380012
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatc 168  Q
    |||||||||| ||||||||||||| || ||| |||| ||| ||||||| || ||||||||||||||||||    
T  9380080 ttaagcttgcttgtgaactcaaaaatatcataaaaa-gactctaaaaatagcgaatgactgactgtcatc 9380012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 39032263 - 39032187
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| ||||||| |||  | ||||||| |||| ||| |||||||||| ||| ||||||||||| |||||||    
T  39032263 ctgtcaaaatcgtgtcacgattttca-aatcgtggcacgattggtgcgtacgacccaaggtacgaccaactttatcct 39032187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 43402357 - 43402430
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||||||  ||||   |||||||||||| ||| |||||||||| |||  ||| ||||||||||||||    
T  43402357 caaaatcatgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacaaccaaccttatcct 43402430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 53921856 - 53921908
Alignment:
Q  254 aatcgtgacacggttgatgcg--tacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| ||||||||  |||||||||| |||||||||||||||||||    
T  53921856 aatcgtgtcacgattgatgcgcatacgactcaaggtacgaccaaccttatcct 53921908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 5258490 - 5258566
Alignment:
Q  229 gtcaaaatcatgtcacgtttt-ctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| ||||||||||| |   ||||||| |||  | ||||||||||| |||| |||||||||||||||||||    
T  5258490 gtcaaaatcgtgtcacgtttttccccaatcgtgccacaatcgatgcgtacgattcaaggtacgaccaaccttatcct 5258566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 326
Target Start/End: Complemental strand, 44331348 - 44331292
Alignment:
Q  271 tgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagcatgccaaa 326  Q
    |||||||||| ||| ||||||||||||||||||| ||||||| || |||| ||||||    
T  44331348 tgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagccaaa 44331292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 49499497 - 49499568
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  49499497 gtttaagcttgcatgtgaactcaaaatatcatgaaaataacactaaaaacagcgaatgactgactgtcatca 49499568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 1951274 - 1951345
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| ||||||||||| ||| ||||||||||| ||| |||| ||||||||||||||||||||||    
T  1951274 gtttaaacttgcttgtgaactcaagatatcatgaaaatgatacttaaaatagtgaatgactgactgtcatca 1951345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 308
Target Start/End: Complemental strand, 15820172 - 15820049
Alignment:
Q  185 tctctcaaaaatgagctgaaacacttgaatagtcctttgcaactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaa 284  Q
    |||||||||||| |||||||||| || |||||| || ||    |||| ||||| ||||| | || | | ||||| |||| |||||||||||||||| |||    
T  15820172 tctctcaaaaataagctgaaacaattaaatagtactctgttgttgtctaaatcgtgtcatggttgccaaaatcgagacatggttgatgcgtacgacccaa 15820073  T
Q  285 agtacgaccaaccttatcctaaaa 308  Q
     |||||||||||||||||||||||    
T  15820072 ggtacgaccaaccttatcctaaaa 15820049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 46064714 - 46064641
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagcatgccaaa 326  Q
    ||||||| |||||||||| |||||||| ||| ||||||||||| ||||||| |||| |||||||||||||||||    
T  46064714 aatcgtgtcacggttgatacgtacgacccaaggtacgaccaactttatcctgaaaatgtgccaagcatgccaaa 46064641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 2793370 - 2793298
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||| ||||| ||||||||||||||| ||| |||| ||| ||||||| |||||| ||||||||||||||||    
T  2793370 gtttaaacttgcttgtgaactcaaaatatcattaaaaagactctaaaaatagtgaacgactgactgtcatcac 2793298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 28220571 - 28220651
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaa 307  Q
    ||||||||||| ||||||||||||   |||||||||||| ||  |||||||||| ||| ||||||||||||||||| ||||    
T  28220571 ctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaa 28220651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 31204085 - 31204014
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| |  ||||||||||||||||||| |  |||||||||||| ||||||    
T  31204085 gtttaagcttgcttgtgaactcaaaacataatgaaaatgacactaaaaataaagaatgactgactatcatca 31204014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 4552993 - 4553079
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtg 312  Q
    ||||||||| | |||||||||||    ||||||||||||||||||||||||||||||   |||||| ||||||||||| ||||||||    
T  4552993 ctgtcaaaaacgtgtcacgttttgccaaatcgtgacacggttgatgcgtacgactcacgatacgactaaccttatcctgaaaacgtg 4553079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 29135846 - 29135780
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    |||||||||||| ||| |||||||||| ||| ||||||||||||||||||| |||||||||| ||||    
T  29135846 aatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagca 29135780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 29652191 - 29652268
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||||||||||| || | |||||||||||| ||| || ||||||| ||| |||||||||||||||||||    
T  29652191 ctgtcaaaatcatgtcacgtttgtcca-aatcgtgacacgattggtgtgtacgacccaaggtacgaccaaccttatcct 29652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 13547679 - 13547744
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaacgtgccaagca 319  Q
    |||||||||||||||| |||||||||| ||| ||||||||||||||||   |||||||||| ||||    
T  13547679 aatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatttgaaaacgtgcccagca 13547744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 13549590 - 13549655
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaacgtgccaagca 319  Q
    |||||||||||||||| |||||||||| ||| ||||||||||||||||   |||||||||| ||||    
T  13549590 aatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatttgaaaacgtgcccagca 13549655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 16455442 - 16455369
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagcatgccaaa 326  Q
    ||||||| ||||||||||||||||||| ||| |||||| ||| |||||||| |||||||||||| ||| |||||    
T  16455442 aatcgtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaacgtgccaaacataccaaa 16455369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 49918172 - 49918079
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    ||||||||||| |||||| |||||   |||||||||||| ||| || ||||||| ||| ||| ||||||||||||||| |||||||||| ||||    
T  49918172 ctgtcaaaatcgtgtcacattttcccaaatcgtgacacgattggtgtgtacgacccaaggtatgaccaaccttatcctgaaaacgtgcccagca 49918079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 28223766 - 28223846
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaa 307  Q
    ||||||||||| ||||||||||||   ||| |||||||| ||  |||||||||| ||| ||||||||||||||||| ||||    
T  28223766 ctgtcaaaatcgtgtcacgttttcccaaattgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaa 28223846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 31659064 - 31658984
Alignment:
Q  224 caactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||| |||||| ||||    |||||||||||| ||| |||||||||| ||| |||| ||||||||||||||    
T  31659064 caactgtcaaaatcgtgtcacattttaccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcct 31658984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 1833345 - 1833270
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    ||||||||||| ||||||||||||   |||||||||||| ||| ||||||| || ||| ||| |||||||||||||    
T  1833345 ctgtcaaaatcgtgtcacgttttcgcaaatcgtgacacgtttggtgcgtacaacccaaggtatgaccaaccttatc 1833270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 6071829 - 6071895
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| ||||||||||||||     ||| | ||||||||||||||||||||    
T  6071829 gtttaagcttgcttgtgaactcaaaacaacatgaaaatgac-----aaataatgaatgactgactgtcatca 6071895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 10925046 - 10924972
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttat 301  Q
    ||||||||||| |||||||||||    ||||||||||||||||||||||| ||| ||| ||| ||||||| ||||    
T  10925046 ctgtcaaaatcgtgtcacgttttgccaaatcgtgacacggttgatgcgtatgacccaaggtatgaccaactttat 10924972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 13598778 - 13598855
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||| || | ||| |||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  13598778 ctgtcaaaatcgtgtcacgtttgtcca-aattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 13598855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 37070145 - 37070222
Alignment:
Q  227 ctgtcaaaatcatgtcacg-ttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||| |||||||| ||||| | ||||||| |||| ||| |||||||||| ||| |||||||||||||||||||    
T  37070145 ctgtcaaaattatgtcacgattttcca-aatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcct 37070222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 302
Target Start/End: Complemental strand, 44455005 - 44454907
Alignment:
Q  204 aacacttgaatagtcctttgcaactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    ||||||| |||||| |  |||||||||||||||| || ||||||||    |||||||||||| ||  |||||||||| ||| |||| ||||||||||||    
T  44455005 aacacttaaatagtaccctgcaactgtcaaaatcgtgccacgttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtacaaccaaccttatc 44454907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 193213 - 193136
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    ||||||| ||||||| ||||   ||||| |||||| ||| |||||||||| ||| |||||||||| ||||||||||||    
T  193213 caaaatcgtgtcacgatttcccaaatcgcgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctaaaa 193136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 21536289 - 21536213
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||||| | ||||| | |||| ||| |||||||||| ||| ||||||||||||| |||||    
T  21536289 ctgtcaaaatcgtgtcacgttttcca-aatcggggcacgattggtgcgtacgacccaaggtacgaccaacctcatcct 21536213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 13604336 - 13604265
Alignment:
Q  232 aaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| || ||||||||| | ||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  13604336 aaaatcgtgccacgttttcca-aatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcct 13604265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 3282085 - 3282159
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    ||||||||||| |||||||||||  | ||||||| |||| ||| |||||||||| ||| ||| |||||||||||||    
T  3282085 ctgtcaaaatcgtgtcacgtttttca-aatcgtggcacgattggtgcgtacgacccaaggtatgaccaaccttatc 3282159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 30476793 - 30476868
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    ||||||||||| ||||||||||||   |||||||||||| ||| || ||||||| ||| || | ||||||||||||    
T  30476793 ctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgtgtacgacccaaggttcaaccaaccttatc 30476868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 11348297 - 11348247
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| ||| |||||||||  ||| |||||||||||||||||||    
T  11348297 aatcgtgacacgtttggtgcgtacgatccaatgtacgaccaaccttatcct 11348247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 37033659 - 37033709
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| ||| |||||||||| ||| |||| ||||||||||||||    
T  37033659 aatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcct 37033709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 37879481 - 37879535
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    |||||||||| | ||| ||||| |||| ||| |||||||||||||||||||||||    
T  37879481 aatcgtgacatgtttggtgcgtgcgacccaaggtacgaccaaccttatcctaaaa 37879535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 41059164 - 41059234
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||| || |||||||||| || ||| |||| ||| ||||||| || |||||||||||||||||||    
T  41059164 ttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 41059234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 13316692 - 13316740
Alignment:
Q  256 tcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||| |||| |||||||||||||  ||| |||||||||||||||||||    
T  13316692 tcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcct 13316740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 15466241 - 15466170
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  15466241 gtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgattgtcatca 15466170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 36809364 - 36809435
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  36809364 gtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 36809435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 38006215 - 38006286
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  38006215 gtttaagcttgtttgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtaatca 38006286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 26358743 - 26358671
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||| ||| | ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  26358743 gtttaaacttccttgtgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 26358671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 25821847 - 25821922
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataa----catgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| |||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||    
T  25821847 gtttaagcttgcttgtgaactcaaaatatatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 25821922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 25873274 - 25873202
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||| ||||| ||||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||||    
T  25873274 gtttaaacttgcttgtgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcac 25873202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 36318354 - 36318440
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtg 312  Q
    ||||||||||| ||||||||||| |  ||| |||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||||    
T  36318354 ctgtcaaaatcgtgtcacgttttgtcaaattgtgacacggttggtgcgtacgattcaaggtacgaccaaccttatcctgaaaacgtg 36318440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 34389229 - 34389305
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||||| | |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  34389229 ctgtcaaaatcgtgtcacgttttcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 34389305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 36985664 - 36985732
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtca 166  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||| |  ||||||||||||||||    
T  36985664 gtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataacgaatgactgactgtca 36985732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 25869906 - 25869835
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||| | ||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||    
T  25869906 gtttaaactttcttgtgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 25869835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 21630323 - 21630416
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    ||||||||||| |||||||||| || | |||||||||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  21630323 ctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgtgtacgacccaaagtacgaccaaccttatcctgaaaacgtgcccagca 21630416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 45456371 - 45456299
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||| |  ||||| |||| |||||||||    
T  45456371 gtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataaagaatggctgattgtcatcac 45456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 30275620 - 30275691
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||  |||||| |||||||| |||||||||||||||||||| | ||||||||||||| ||||||    
T  30275620 gtttaaacttgtttgtgaattcaaaatatcatgaaaatgacactaaaaatattgaatgactgactatcatca 30275691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 45453122 - 45453051
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| | |||||||||||| ||||||| |  |||||||||| ||||||||    
T  45453122 gtttaagcttgcttgtgaactcaaaacatcatgaaaatgaccctaaaaataaagaatgactgattgtcatca 45453051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 20522600 - 20522693
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct-aaaacgtgccaagca 319  Q
    ||||||||||| |||||||||| || | ||| |||||||| ||| |||||||||| ||| ||||||||||||||||||| |||||||||| ||||    
T  20522600 ctgtcaaaatcgtgtcacgtttgtcca-aattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagca 20522693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 2837189 - 2837266
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| ||| ||||||||   |||| ||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  2837189 ctgtcaaaatcgtgttacgttttcccaaatcatgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 2837266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 23078193 - 23078114
Alignment:
Q  224 caactgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||||  |||||||||||| | ||||||| |||| ||| |||||||||| |||  ||||||||||||||||||    
T  23078193 caactgtcaaaattgtgtcacgttttcca-aatcgtggcacgattggtgcgtacgacccaagatacgaccaaccttatcct 23078114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 28258891 - 28258820
Alignment:
Q  232 aaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| || ||||||||| | ||||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  28258891 aaaatcgtgccacgttttcca-aatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcct 28258820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 45099577 - 45099501
Alignment:
Q  229 gtcaaaatcatgtcacgtttt-ctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| ||||||||||| |   ||||||| |||| ||||||||||||| |||| |||||||||||||||||||    
T  45099577 gtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgattcaaggtacgaccaaccttatcct 45099501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 5723626 - 5723676
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  5723626 aatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcct 5723676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 10706971 - 10706895
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||||| | || |||| |||| ||| || ||||||| ||| |||||||||||||||||||    
T  10706971 ctgtcaaaatcgtgtcacgttttcca-aaccgtggcacgattggtgtgtacgacccaaggtacgaccaaccttatcct 10706895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 14698731 - 14698651
Alignment:
Q  224 caactgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||| |||||||| |||||||||| || | |||||||| | ||||| |||||||||| ||| |||||||||||||||||||    
T  14698731 caactatcaaaatcgtgtcacgtttgtcca-aatcgtgaaatggttggtgcgtacgacccaaggtacgaccaaccttatcct 14698651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 36988421 - 36988497
Alignment:
Q  229 gtcaaaatcatgtcacgttttctag-aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| |||||| ||||| |  ||||||| |||  |||||||||||||| ||| |||||||||||||||||||    
T  36988421 gtcaaaatcgtgtcacattttccatcaatcgtgtcacaattgatgcgtacgacccaaggtacgaccaaccttatcct 36988497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 2334789 - 2334839
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| |||||| ||||||| ||| |||||||||||||||||||    
T  2334789 aatcgtgtcacgattgatgtgtacgacccaaggtacgaccaaccttatcct 2334839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 10600020 - 10599951
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||| ||||||||||||| || ||| |||| ||  ||||||| ||||||||||||||||||||||    
T  10600020 ttaagcttgcttgtgaactcaaaaatatcataaaaa-gattctaaaaatagtgaatgactgactgtcatca 10599951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 39483281 - 39483331
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| ||| |||||| ||| ||| |||||||||||||||||||    
T  39483281 aatcgtgacacgattggtgcgtaagacccaaggtacgaccaaccttatcct 39483331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 39284708 - 39284655
Alignment:
Q  227 ctgtcaaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgac 280  Q
    ||||||||||||||||||||||||   |||||||||||  ||| ||||||||||    
T  39284708 ctgtcaaaatcatgtcacgttttcccaaatcgtgacacatttggtgcgtacgac 39284655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 4503478 - 4503554
Alignment:
Q  229 gtcaaaatcatgtcacgtttt-ctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||| ||||||||||| |   ||||||| |||  |||||||||||||  ||| |||||||||||||||||||    
T  4503478 gtcaaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacgatccaaggtacgaccaaccttatcct 4503554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 29439666 - 29439597
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||| ||||| ||||||||||| ||  |||||||||||||||||||  |  ||||||| |||||||||||    
T  29439666 gtttaaacttgcttgtgaactcaacat--catgaaaatgacactaaaattaacgaatgacggactgtcatca 29439597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 33118540 - 33118588
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    |||||||||||| ||| |||||||||| ||| ||||| |||||||||||    
T  33118540 aatcgtgacacgattggtgcgtacgacccaaggtacggccaaccttatc 33118588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 35447473 - 35447521
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    |||||||||||| ||| |||||||||| ||| |||||| ||||||||||    
T  35447473 aatcgtgacacgtttggtgcgtacgacccaaggtacgagcaaccttatc 35447521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 38014707 - 38014636
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| || ||| |||| ||| ||||||| ||  ||||||||||||||||||    
T  38014707 gtttaagcttgcttgtgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgactgactgtcatca 38014636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 89036 - 88965
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||| |  |||||||||||||||||||    
T  89036 gtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataacgaatgactgactgtcatca 88965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1684 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 403 - 474
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||| |  |||||||||||| ||||||    
T  403 gtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactgactttcatca 474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 291034 - 290974
Alignment:
Q  98 gtttaagcttgcatgtgaactcaaaataacatgaaaatgacactaaaaacagtgaatgact 158  Q
    |||||| ||||| |||||||| |||||| |||||||||||||||||||| |||||||||||    
T  291034 gtttaaacttgcttgtgaacttaaaatatcatgaaaatgacactaaaaatagtgaatgact 290974  T

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Target: scaffold0286 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 11159 - 11086
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| ||||||| ||||   |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  11159 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcct 11086  T

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Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 80850 - 80923
Alignment:
Q  231 caaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| ||||||| ||||   |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  80850 caaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcct 80923  T

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Target: scaffold0381 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 6484 - 6555
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatcac 170  Q
    |||||||||| ||||||||||||| || ||| |||| ||| ||||||| || ||||||||||||||||||||    
T  6484 ttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatcac 6555  T

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Target: scaffold0757 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 4632 - 4563
Alignment:
Q  100 ttaagcttgcatgtgaactcaaaa-taacatgaaaatgacactaaaaacagtgaatgactgactgtcatca 169  Q
    |||||||||| ||||||||||||| || ||| |||| ||| ||||||| ||||||||||||||||||||||    
T  4632 ttaagcttgcttgtgaactcaaaaatatcataaaaa-gactctaaaaatagtgaatgactgactgtcatca 4563  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 2898 - 2948
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  2898 aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 2948  T

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Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 6063 - 6140
Alignment:
Q  227 ctgtcaaaatcatgtcacgttt-tctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||||||| |||||||||| || | ||| |||||||| ||| |||||||||| ||| |||||||||||||||||||    
T  6063 ctgtcaaaatcgtgtcacgtttgtcca-aattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 6140  T

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Target: scaffold0006; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 132993 - 132922
Alignment:
Q  232 aaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| || ||||||||| | ||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  132993 aaaatcgtgccacgttttcca-aatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcct 132922  T

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Target: scaffold0176 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 17636 - 17684
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatc 302  Q
    |||||||||||| ||| |||||||||||||  |||||||||||||||||    
T  17636 aatcgtgacacgtttggtgcgtacgactcagggtacgaccaaccttatc 17684  T

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Target: scaffold0466 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 6905 - 6855
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||||||| ||||| |||||||||| ||| |||| ||||||||||||||    
T  6905 aatcgtgacatggttggtgcgtacgacccaaggtacaaccaaccttatcct 6855  T

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Target: scaffold0140 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 8110 - 8060
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  8110 aatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcct 8060  T

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Target: scaffold0066 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 20787 - 20841
Alignment:
Q  254 aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcctaaaa 308  Q
    |||||||||||| ||  |||||||||| ||| |||||||||||||||| ||||||    
T  20787 aatcgtgacacgtttagtgcgtacgacccaaggtacgaccaaccttattctaaaa 20841  T

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Target: scaffold0098 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 45582 - 45653
Alignment:
Q  232 aaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| || ||||||||| | ||||||| |||| |||||  ||||||| ||| |||||||||||||||||||    
T  45582 aaaatcgtgccacgttttcca-aatcgtgtcacgattgatatgtacgacccaaggtacgaccaaccttatcct 45653  T

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Target: scaffold0087 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 36546 - 36475
Alignment:
Q  232 aaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| || ||||||||| | ||||||| || | ||| |||||||||| ||| |||||||||||||||||||    
T  36546 aaaatcgtgccacgttttcca-aatcgtgccatgattggtgcgtacgacccaaggtacgaccaaccttatcct 36475  T

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Target: scaffold0087; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 43675 - 43604
Alignment:
Q  232 aaaatcatgtcacgttttctagaatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    |||||| || ||||||||| | ||||||| |||| ||||| | |||||| ||| |||||||||||||||||||    
T  43675 aaaatcgtgccacgttttcca-aatcgtgccacgattgatacatacgacccaaggtacgaccaaccttatcct 43604  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 304
Target Start/End: Complemental strand, 114404 - 114332
Alignment:
Q  233 aaatcatgtcacgttttctag-aatcgtgacacggttgatgcgtacgactcaaagtacgaccaaccttatcct 304  Q
    ||||| |||||||||||| |  ||||||| ||||  ||||||||||||| ||| |||| ||||||||||||||    
T  114404 aaatcgtgtcacgttttccatcaatcgtgtcacgagtgatgcgtacgacccaaggtaccaccaaccttatcct 114332  T

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