View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0802_low_56 (Length: 250)

Name: NF0802_low_56
Description: NF0802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0802_low_56
NF0802_low_56
[»] chr8 (43 HSPs)
chr8 (62-243)||(8170891-8171071)
chr8 (67-243)||(40412696-40412871)
chr8 (33-243)||(12579781-12579984)
chr8 (62-185)||(27108980-27109102)
chr8 (33-166)||(32760098-32760228)
chr8 (29-138)||(32877826-32877934)
chr8 (29-166)||(5540164-5540299)
chr8 (34-156)||(36484176-36484296)
chr8 (29-166)||(32638455-32638589)
chr8 (29-166)||(45216461-45216596)
chr8 (29-138)||(6028861-6028969)
chr8 (86-187)||(7411811-7411912)
chr8 (29-166)||(28875806-28875941)
chr8 (58-187)||(38388876-38389004)
chr8 (29-166)||(4246671-4246806)
chr8 (64-133)||(19436628-19436696)
chr8 (64-133)||(19572777-19572845)
chr8 (195-243)||(36484094-36484142)
chr8 (195-243)||(37669239-37669287)
chr8 (64-127)||(20182636-20182698)
chr8 (29-166)||(22201059-22201194)
chr8 (62-132)||(3892206-3892275)
chr8 (37-166)||(34900618-34900745)
chr8 (62-153)||(27968338-27968425)
chr8 (58-146)||(29355868-29355955)
chr8 (29-141)||(43770945-43771055)
chr8 (195-243)||(43771115-43771163)
chr8 (28-138)||(19947615-19947722)
chr8 (195-250)||(28875966-28876021)
chr8 (33-166)||(37669312-37669442)
chr8 (195-243)||(4246598-4246646)
chr8 (62-114)||(27886459-27886510)
chr8 (62-114)||(27945117-27945168)
chr8 (62-114)||(28025360-28025411)
chr8 (195-243)||(34900770-34900818)
chr8 (195-231)||(45216621-45216657)
chr8 (67-110)||(5818143-5818185)
chr8 (62-132)||(32844-32913)
chr8 (153-187)||(3892173-3892207)
chr8 (153-187)||(5818206-5818240)
chr8 (29-138)||(25022525-25022631)
chr8 (29-138)||(42949440-42949546)
chr8 (195-243)||(5540091-5540139)
[»] chr6 (28 HSPs)
chr6 (62-243)||(3212722-3212902)
chr6 (62-187)||(10894304-10894428)
chr6 (62-187)||(7255130-7255255)
chr6 (67-243)||(32018257-32018424)
chr6 (29-166)||(7188018-7188154)
chr6 (67-187)||(6707830-6707950)
chr6 (29-138)||(31740454-31740562)
chr6 (135-243)||(22988963-22989074)
chr6 (135-243)||(23799322-23799433)
chr6 (29-166)||(31195590-31195725)
chr6 (33-166)||(8357624-8357755)
chr6 (62-187)||(13061159-13061283)
chr6 (62-187)||(11105495-11105620)
chr6 (62-132)||(19128395-19128464)
chr6 (29-138)||(32130299-32130405)
chr6 (62-167)||(26327524-26327628)
chr6 (62-132)||(234551-234620)
chr6 (37-166)||(1036063-1036190)
chr6 (62-124)||(22988911-22988972)
chr6 (62-124)||(23799424-23799485)
chr6 (62-132)||(27084216-27084285)
chr6 (195-243)||(7188179-7188227)
chr6 (119-182)||(31079813-31079876)
chr6 (194-243)||(8357551-8357600)
chr6 (195-243)||(1036215-1036263)
chr6 (68-187)||(13045172-13045285)
chr6 (136-187)||(13607643-13607694)
chr6 (153-187)||(27084183-27084217)
[»] chr4 (41 HSPs)
chr4 (67-243)||(24784525-24784700)
chr4 (67-243)||(52721507-52721682)
chr4 (63-243)||(39957841-39958020)
chr4 (62-187)||(24793516-24793640)
chr4 (62-187)||(44521831-44521955)
chr4 (63-187)||(3109091-3109214)
chr4 (67-189)||(24823566-24823687)
chr4 (62-187)||(36943878-36944002)
chr4 (29-166)||(53323084-53323218)
chr4 (62-187)||(17892457-17892581)
chr4 (33-166)||(41146349-41146479)
chr4 (62-187)||(55900933-55901057)
chr4 (62-187)||(42630263-42630393)
chr4 (92-187)||(46431748-46431842)
chr4 (33-138)||(28377268-28377372)
chr4 (29-246)||(52572858-52573064)
chr4 (28-141)||(31227109-31227220)
chr4 (29-166)||(3402813-3402948)
chr4 (33-166)||(14795751-14795882)
chr4 (62-127)||(258876-258941)
chr4 (64-138)||(5835201-5835274)
chr4 (37-166)||(8063344-8063471)
chr4 (89-186)||(722441-722538)
chr4 (195-243)||(3402973-3403021)
chr4 (195-243)||(31227009-31227057)
chr4 (195-243)||(41146276-41146324)
chr4 (195-243)||(53323011-53323059)
chr4 (136-187)||(2586545-2586596)
chr4 (67-187)||(49470489-49470604)
chr4 (62-132)||(1177219-1177288)
chr4 (101-186)||(754380-754465)
chr4 (62-127)||(51859042-51859106)
chr4 (195-243)||(8063496-8063544)
chr4 (195-243)||(14795678-14795726)
chr4 (62-132)||(31946034-31946102)
chr4 (62-132)||(36511740-36511809)
chr4 (138-180)||(37992394-37992436)
chr4 (62-132)||(40694312-40694381)
chr4 (153-187)||(51859004-51859038)
chr4 (70-166)||(38492042-38492136)
chr4 (29-113)||(5325258-5325340)
[»] chr3 (51 HSPs)
chr3 (63-243)||(52684480-52684659)
chr3 (71-243)||(2567063-2567234)
chr3 (67-243)||(21006153-21006328)
chr3 (66-187)||(30787350-30787470)
chr3 (67-187)||(13352985-13353104)
chr3 (64-187)||(47642215-47642337)
chr3 (29-166)||(25936318-25936452)
chr3 (64-187)||(28968720-28968842)
chr3 (62-187)||(7899504-7899627)
chr3 (82-187)||(19421625-19421730)
chr3 (62-187)||(19878887-19879011)
chr3 (62-187)||(45057086-45057210)
chr3 (33-166)||(22610520-22610650)
chr3 (33-166)||(45532306-45532436)
chr3 (67-187)||(20509946-20510065)
chr3 (29-138)||(22311101-22311207)
chr3 (29-166)||(37996530-37996665)
chr3 (72-187)||(21157522-21157638)
chr3 (62-187)||(25700970-25701096)
chr3 (90-187)||(38888897-38888995)
chr3 (29-166)||(52505063-52505198)
chr3 (64-132)||(42229906-42229973)
chr3 (29-166)||(7327968-7328103)
chr3 (29-166)||(48123568-48123703)
chr3 (63-124)||(48334155-48334215)
chr3 (119-187)||(983395-983463)
chr3 (119-187)||(6134223-6134291)
chr3 (195-243)||(45532461-45532509)
chr3 (119-187)||(55268857-55268925)
chr3 (29-166)||(1678920-1679055)
chr3 (62-132)||(19349411-19349480)
chr3 (29-138)||(28882320-28882426)
chr3 (64-138)||(35390121-35390194)
chr3 (62-124)||(48333212-48333273)
chr3 (29-138)||(50286987-50287093)
chr3 (33-138)||(52121533-52121637)
chr3 (62-132)||(22289528-22289597)
chr3 (195-233)||(22610675-22610713)
chr3 (195-233)||(52505223-52505261)
chr3 (195-244)||(28705407-28705456)
chr3 (119-187)||(212715-212783)
chr3 (195-243)||(1679080-1679128)
chr3 (29-141)||(10224399-10224509)
chr3 (195-243)||(10224550-10224598)
chr3 (29-141)||(28705509-28705619)
chr3 (195-243)||(48123495-48123543)
chr3 (62-113)||(29916053-29916103)
chr3 (62-113)||(29965206-29965256)
chr3 (153-187)||(2122918-2122952)
chr3 (135-189)||(28548251-28548305)
chr3 (62-132)||(39664657-39664726)
[»] chr5 (43 HSPs)
chr5 (62-243)||(11907444-11907624)
chr5 (62-243)||(30777195-30777375)
chr5 (61-187)||(27085558-27085683)
chr5 (80-187)||(17138056-17138163)
chr5 (64-187)||(22738047-22738168)
chr5 (136-228)||(6242901-6242993)
chr5 (80-244)||(9729438-9729598)
chr5 (64-187)||(26691825-26691948)
chr5 (64-187)||(26961557-26961680)
chr5 (62-187)||(30284392-30284514)
chr5 (93-187)||(18001781-18001875)
chr5 (29-138)||(10657216-10657324)
chr5 (86-187)||(5722186-5722287)
chr5 (29-114)||(5985717-5985801)
chr5 (72-187)||(5612235-5612351)
chr5 (29-166)||(9793040-9793175)
chr5 (29-166)||(39689970-39690105)
chr5 (92-187)||(34032571-34032666)
chr5 (62-132)||(1795635-1795704)
chr5 (33-166)||(1639033-1639163)
chr5 (63-132)||(26716515-26716583)
chr5 (63-132)||(26986255-26986323)
chr5 (119-187)||(41233515-41233583)
chr5 (62-141)||(3701319-3701397)
chr5 (67-132)||(43357571-43357635)
chr5 (195-243)||(1639188-1639236)
chr5 (62-142)||(15066445-15066524)
chr5 (152-187)||(7629255-7629290)
chr5 (62-132)||(3934594-3934663)
chr5 (62-132)||(14836574-14836643)
chr5 (62-124)||(21251734-21251795)
chr5 (70-132)||(25749848-25749909)
chr5 (195-233)||(33830442-33830480)
chr5 (62-127)||(7629293-7629357)
chr5 (67-132)||(27938401-27938465)
chr5 (195-243)||(12852781-12852829)
chr5 (29-141)||(26794241-26794351)
chr5 (195-243)||(26794392-26794440)
chr5 (153-187)||(3934662-3934696)
chr5 (29-57)||(5722302-5722330)
chr5 (195-243)||(9792967-9793015)
chr5 (135-187)||(11694412-11694462)
chr5 (195-243)||(39690130-39690178)
[»] chr7 (49 HSPs)
chr7 (62-243)||(9283646-9283826)
chr7 (62-243)||(25969657-25969837)
chr7 (62-243)||(9250096-9250275)
chr7 (142-243)||(47719952-47720053)
chr7 (129-243)||(11058598-11058712)
chr7 (62-187)||(23078894-23079018)
chr7 (62-187)||(15878209-15878333)
chr7 (62-187)||(36757797-36757925)
chr7 (62-187)||(36767321-36767449)
chr7 (64-187)||(1400055-1400177)
chr7 (33-166)||(11830432-11830562)
chr7 (62-187)||(33454276-33454400)
chr7 (29-166)||(36661208-36661342)
chr7 (29-156)||(47237991-47238116)
chr7 (29-138)||(1042820-1042928)
chr7 (29-138)||(26773333-26773441)
chr7 (62-187)||(35160070-35160196)
chr7 (62-187)||(36763576-36763705)
chr7 (29-166)||(48163671-48163806)
chr7 (29-166)||(27555086-27555221)
chr7 (29-138)||(8029067-8029175)
chr7 (108-185)||(21180044-21180121)
chr7 (33-166)||(27397362-27397491)
chr7 (135-187)||(44959992-44960044)
chr7 (66-141)||(19820787-19820861)
chr7 (29-138)||(16563995-16564101)
chr7 (29-138)||(16601561-16601667)
chr7 (62-132)||(23969933-23970002)
chr7 (33-166)||(27354184-27354315)
chr7 (62-132)||(48153784-48153853)
chr7 (119-187)||(40041584-40041652)
chr7 (29-127)||(4291940-4292034)
chr7 (29-166)||(16851046-16851181)
chr7 (64-127)||(44269986-44270048)
chr7 (62-132)||(26973296-26973365)
chr7 (63-132)||(36413609-36413676)
chr7 (195-243)||(11830359-11830407)
chr7 (195-243)||(36661135-36661183)
chr7 (62-178)||(38064881-38065001)
chr7 (55-138)||(19510883-19510965)
chr7 (57-132)||(21409629-21409703)
chr7 (195-242)||(47238441-47238488)
chr7 (37-166)||(40096401-40096528)
chr7 (195-231)||(27397516-27397552)
chr7 (195-243)||(40096328-40096376)
chr7 (59-106)||(44959119-44959165)
chr7 (153-187)||(21409596-21409630)
chr7 (153-187)||(24956457-24956491)
chr7 (29-57)||(33454392-33454420)
[»] chr2 (33 HSPs)
chr2 (67-243)||(45158966-45159141)
chr2 (67-184)||(31235976-31236092)
chr2 (64-187)||(34146389-34146511)
chr2 (62-187)||(3545366-3545489)
chr2 (62-187)||(35342527-35342650)
chr2 (67-187)||(2319484-2319603)
chr2 (33-243)||(6496916-6497119)
chr2 (80-187)||(21104691-21104799)
chr2 (29-166)||(40308077-40308212)
chr2 (33-243)||(4169765-4169969)
chr2 (33-113)||(20537122-20537201)
chr2 (92-187)||(10573703-10573798)
chr2 (62-132)||(14824381-14824450)
chr2 (29-166)||(22485011-22485146)
chr2 (62-124)||(24585785-24585847)
chr2 (80-138)||(5371333-5371391)
chr2 (29-138)||(12819573-12819679)
chr2 (195-243)||(6124836-6124884)
chr2 (29-141)||(6124940-6125050)
chr2 (195-243)||(22484938-22484986)
chr2 (195-243)||(40308237-40308285)
chr2 (63-114)||(40431830-40431880)
chr2 (29-166)||(7807096-7807231)
chr2 (62-127)||(4355559-4355623)
chr2 (67-132)||(4562031-4562095)
chr2 (135-187)||(9293314-9293366)
chr2 (55-127)||(18301364-18301435)
chr2 (64-103)||(9293655-9293693)
chr2 (62-124)||(1005762-1005823)
chr2 (153-187)||(44156807-44156841)
chr2 (62-132)||(44156840-44156909)
chr2 (67-132)||(8482729-8482793)
chr2 (155-187)||(4355521-4355553)
[»] chr1 (45 HSPs)
chr1 (62-187)||(36551593-36551717)
chr1 (67-187)||(24851679-24851798)
chr1 (33-166)||(25257349-25257479)
chr1 (67-187)||(24589913-24590033)
chr1 (33-166)||(5984919-5985049)
chr1 (62-187)||(47654873-47654997)
chr1 (29-166)||(36367419-36367554)
chr1 (62-186)||(32380865-32380989)
chr1 (29-138)||(43190015-43190123)
chr1 (46-156)||(28658661-28658768)
chr1 (29-166)||(28948448-28948583)
chr1 (92-177)||(3708100-3708185)
chr1 (33-166)||(30324452-30324582)
chr1 (91-187)||(2472736-2472832)
chr1 (135-187)||(33039819-33039871)
chr1 (29-141)||(36363295-36363405)
chr1 (29-127)||(14334540-14334635)
chr1 (29-166)||(37104382-37104517)
chr1 (64-187)||(41675777-41675899)
chr1 (37-166)||(6916111-6916238)
chr1 (29-166)||(8132914-8133049)
chr1 (29-138)||(31653056-31653162)
chr1 (62-187)||(38218592-38218714)
chr1 (37-166)||(38331181-38331308)
chr1 (195-243)||(3427509-3427557)
chr1 (195-243)||(5984846-5984894)
chr1 (55-138)||(13012654-13012736)
chr1 (62-132)||(9528651-9528720)
chr1 (62-127)||(9781889-9781953)
chr1 (29-141)||(3427613-3427723)
chr1 (195-243)||(6916263-6916311)
chr1 (195-243)||(8132841-8132889)
chr1 (195-243)||(38331108-38331156)
chr1 (195-243)||(52895102-52895150)
chr1 (200-243)||(25257277-25257320)
chr1 (67-138)||(37346631-37346702)
chr1 (62-132)||(10822636-10822705)
chr1 (62-132)||(29168189-29168258)
chr1 (62-132)||(34096360-34096429)
chr1 (37-166)||(52894950-52895077)
chr1 (67-132)||(34432227-34432291)
chr1 (67-127)||(14167316-14167375)
chr1 (195-243)||(28948608-28948656)
chr1 (195-243)||(30324379-30324427)
chr1 (29-57)||(47654989-47655017)
[»] scaffold0112 (2 HSPs)
scaffold0112 (80-166)||(41374-41458)
scaffold0112 (195-243)||(41483-41531)
[»] scaffold0005 (2 HSPs)
scaffold0005 (33-166)||(43849-43980)
scaffold0005 (195-243)||(44005-44053)
[»] scaffold0285 (1 HSPs)
scaffold0285 (62-167)||(13607-13710)
[»] scaffold0037 (2 HSPs)
scaffold0037 (97-166)||(27092-27160)
scaffold0037 (195-231)||(27185-27221)
[»] scaffold0250 (1 HSPs)
scaffold0250 (29-138)||(5902-6008)


Alignment Details
Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 8170891 - 8171071
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| ||||| |||||||||||| ||||||| ||||||||||||| ||||||  || ||||||||| |||||  |||||||| |||||||||||||||||    
T  8170891 agtgctatacaatatccaaaaag-aacattggtagtgctatactatatcgatctaaaaaagaagcactatatcgaaaaaagagcatatcagtactcaaga 8170989  T
Q  162 gttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||    
T  8170990 gttaagttattttagttaacattaatcgtctcaatctcctctcctctatttccatcaacaagatacaaagcagcttccaaat 8171071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 40412871 - 40412696
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||||  || ||| ||||| |||||  ||||||||||| |||||||||||||||||||    
T  40412871 tatactatatccaaagag-aacattgttagtgctatactatatcgatctaaaaaaaaagcactatatcaaaaaaagaacacatcagtactcaagagttaa 40412773  T
Q  167 gctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    | ||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||||    
T  40412772 gttattttagttaacattagtcgtctcaatctcctctccttcatttccatcaacaagatacaaaccagcttccaaat 40412696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 243
Target Start/End: Original strand, 12579781 - 12579984
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||  ||||||||||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| ||||||||| ||||    
T  12579781 caaaaagagcactatcagtgctatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactata 12579878  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatc 232  Q
    | |||||||||||| ||||||||| ||||||||| |  |   |  ||||  ||| ||| |  |||||||||||||||||||||||| |||||||||||||    
T  12579879 tccaaaaaagaacacatcagtact-aagagttaa-cactaacaagtaac--taa-cgtttacatctcctctcctccattcccatcatcaagatacaaatc 12579973  T
Q  233 agtttccaaat 243  Q
    || ||||||||    
T  12579974 agcttccaaat 12579984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 27108980 - 27109102
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||||||||||||||| |||| |||||||||| ||||||| |||||| ||| ||||||||| ||||| |||||||||||| ||| ||||| || |    
T  27108980 agtgctatactatatccaaaa-ggaaaattgttagtgttatactatatcgatccaaaaaagaagcactatatccaaaaaagaacacatcggtacttaaca 27109078  T
Q  162 gttaagctattttagttaacatta 185  Q
    |||||| |||||||||||||||||    
T  27109079 gttaagttattttagttaacatta 27109102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 32760228 - 32760098
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||  ||||||| ||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| ||||||||| ||||    
T  32760228 caaaaagagcactatcagtgttatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactata 32760131  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | |||||||||||| ||||||||| |||||||||    
T  32760130 tccaaaaaagaacacatcagtact-aagagttaa 32760098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 32877934 - 32877826
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| ||||||| |  | |||||||||||||||| ||||||||||||||||||||||| |||||| ||| |||||||||     
T  32877934 ataccaaaaagagcaccatcagtgttatacatcaacgctatactatatccaaaa-ggaacattgttagtgctatactatatcgatccaaaaaagaagcac 32877836  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  32877835 tatatccaaa 32877826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 5540299 - 5540164
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    |||||||||||||||||||||||| ||||||| | || || ||||||||| ||||||||| |||||||||||||| || |||||| ||| |||||| ||     
T  5540299 ataccaaaaagagcatcatcagtgttatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgctatattatatcgatccaaaaaagaatcac 5540202  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  5540201 tatatccaaaaaaagaacacatcagtact-aagagttaa 5540164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 36484296 - 36484176
Alignment:
Q  34 aaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatat 133  Q
    ||||||||||  ||||||| ||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| ||||||||| |||||    
T  36484296 aaaaagagcactatcagtgttatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactatat 36484199  T
Q  134 acaaaaaagaacatatcagtact 156  Q
     |||||||||||| |||||||||    
T  36484198 ccaaaaaagaacacatcagtact 36484176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 32638455 - 32638589
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| ||||||||||||||||   || || ||||||| ||||| ||||| ||||||||||||||| | |||||| ||| |||||||||     
T  32638455 ataccaaaaagagcaccatcagtgctatacatcgatgctacactatattcaaaa-ggaac-ttgttagtgctatacaatatcgatccaaaaaagaagcac 32638552  T
Q  129 tatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| |||||||||||| || |||||| |||||||||    
T  32638553 tatatccaaaaaagaacacatgagtact-aagagttaa 32638589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 45216461 - 45216596
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| ||||| |||||||||| | || || ||||||||| ||||||||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  45216461 ataccaaaaagagcaccatcattgctatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcat 45216558  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  45216559 tatatccaaaaaaagaacacatcagtact-aagagttaa 45216596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 6028969 - 6028861
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    |||| ||||||||||  | ||||| ||||||| | || |||||||||||||||| ||||||||||||||||||||||| |||||| ||| |||||||||     
T  6028969 atacaaaaaagagcacgagcagtgttatacatcaatgctatactatatccaaaa-ggaacattgttagtgctatactatatcgatccaaaaaagaagcac 6028871  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  6028870 tatatccaaa 6028861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 7411912 - 7411811
Alignment:
Q  86 aacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacatta 185  Q
    ||||||||||||| ||||||| |||||| ||| ||  ||||| ||| | |||||||||||| ||| || ||||||||||||| |||||||||||||||||    
T  7411912 aacattgttagtgttatactatatcgatccaaaaagaaagcactatgttcaaaaaagaacacatcggttctcaagagttaagttattttagttaacatta 7411813  T
Q  186 at 187  Q
    ||    
T  7411812 at 7411811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 28875806 - 28875941
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||||||||||   || |||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| |||||| ||     
T  28875806 ataccaaaaagagcatcatcaggaataaacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaatcac 28875903  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  28875904 tatatccaaaaaaagaacacatcagtact-aagagttaa 28875941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 187
Target Start/End: Complemental strand, 38389004 - 38388876
Alignment:
Q  58 catgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactc 157  Q
    |||||||| |||| | ||||||||| | ||||||||||||| ||||||| |||||| ||| |||||| |  || || || ||||||||| ||||||||||    
T  38389004 catgagtgctatattttatccaaaatg-aacattgttagtgttatactatatcgattcaaaaaagaaactctacatccataaaagaacacatcagtactc 38388906  T
Q  158 aagagttaagctattttagttaacattaat 187  Q
     ||||||||| | ||||||| |||||||||    
T  38388905 gagagttaagtttttttagtcaacattaat 38388876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 4246806 - 4246671
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| ||||| || ||||||| | || || ||||||||| |||| |||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  4246806 ataccaaaaagagcaccatcattgttatacatcaatgctacactatatcc-aaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcac 4246709  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  4246708 tatatccaaaaaaagaacacatcagtact-aagagttaa 4246671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 19436696 - 19436628
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatat 133  Q
    ||||||||||||||||||| |||||||||||| |||||||||| |||||| ||| ||||||||| |||||    
T  19436696 tgttatactatatccaaaa-ggaacattgttaatgctatactatatcgatccaaaaaagaagcactatat 19436628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 19572845 - 19572777
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatat 133  Q
    ||||||||||||||||||| |||||||||||| |||||||||| |||||| ||| ||||||||| |||||    
T  19572845 tgttatactatatccaaaa-ggaacattgttaatgctatactatatcgatccaaaaaagaagcactatat 19572777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 36484142 - 36484094
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  36484142 atctcctctcctccattcccatcatcaagatacaaatcagcttccaaat 36484094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 37669287 - 37669239
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  37669287 atctcctctcctccattcccatcatcaagatacaaatcagcttccaaat 37669239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 20182698 - 20182636
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| ||||||| || |||||||||    
T  20182698 tgttatactatatccaaaa-ggaacattgttagtgttatactatatcgataaaaaaaagaagca 20182636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 22201059 - 22201194
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    |||||||||| |||| || ||||| ||||||| | || || |||||||||||||  |||  |||||||| |||||||| |||||| ||| |||||| ||     
T  22201059 ataccaaaaatagcaccaacagtgttatacatcaatgctacactatatccaaaa--gaaacttgttagtactatactatatcgatccaaaaaagaatcac 22201156  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  22201157 tatatccaaaaaaagaacacatcagtact-aagagttaa 22201194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 3892275 - 3892206
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| ||| || ||| ||||||||| ||||    
T  3892275 agtgttatactatatccaaaa-gaaacattgttagtgctatactatatcaatccaaaaaagaagcactata 3892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 34900618 - 34900745
Alignment:
Q  37 aagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatac- 135  Q
    ||||||| |||||||| ||||||| | || || ||||||||| |||| |||| ||||||||| ||||||| |||||| ||| |||||| || ||||| |     
T  34900618 aagagcaccatcagtgttatacatcaatgctacactatatcc-aaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactatatcca 34900715  T
Q  136 aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||||||||| ||||||||| |||||||||    
T  34900716 aaaaaagaacacatcagtact-aagagttaa 34900745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 27968425 - 27968338
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagt 153  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| || |||    || ||||| |||||||||||| ||||||    
T  27968425 agtgttatactatatccaaaa-ggaacattgttagtgttatactatatcgataaaaaaaaa---cactatatccaaaaaagaacacatcagt 27968338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 29355955 - 29355868
Alignment:
Q  58 catgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaaca 146  Q
    |||||||| |||||||||| ||||| | ||||||||||||| ||||||| ||  ||| || ||||||||| ||||| ||||||||||||    
T  29355955 catgagtgctatactatattcaaaa-gaaacattgttagtgttatactatattaataaaaaaaagaagcactatatccaaaaaagaaca 29355868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 43770945 - 43771055
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| ||||||| | || || |||||||   ||||||||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  43770945 ataccaaaaagagcaccatcagtgttatacatcaatgctacactatat-ataaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcac 43771042  T
Q  129 tatatacaaaaaa 141  Q
    ||||| |||||||    
T  43771043 tatatccaaaaaa 43771055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 43771115 - 43771163
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  43771115 atctcctctcctccattcccatcatcaagatacaaatcaacttccaaat 43771163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 138
Target Start/End: Original strand, 19947615 - 19947722
Alignment:
Q  28 cataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    |||||||||||||||| || ||||| |||  || | |||||||||||| || ||||| |||||||||| || ||||||| |||||| ||| |||||||||    
T  19947615 cataccaaaaagagcaccaccagtgttat--atcaatgttatactata-cccaaaagaaacattgttaatgttatactatatcgatccaaaaaagaagca 19947711  T
Q  128 atatatacaaa 138  Q
     ||||| ||||    
T  19947712 ctatatccaaa 19947722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 28875966 - 28876021
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaatatgattc 250  Q
    |||||||||||||||||||||| | ||||||||||||||  |||||||| ||||||    
T  28875966 atctcctctcctccattcccattatcaagatacaaatcaacttccaaatctgattc 28876021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 37669442 - 37669312
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||  ||||||  ||||||| | || || | |||||||||||  |||  |||||||||||||| || || ||| ||| ||||||||| ||||    
T  37669442 caaaaagagcactatcagtattatacatcaatgctacagtatatccaaaa--gaaacttgttagtgctatattatattgatccaaaaaagaagcactata 37669345  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | |||||||||||| |||| |||| |||||||||    
T  37669344 tccaaaaaagaacacatcaatact-aagagttaa 37669312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 4246646 - 4246598
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  4246646 atctcctctcctccattcccatcatcaagatacagatcaacttccaaat 4246598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 27886510 - 27886459
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgata 114  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||| |||||||    
T  27886510 agtgttatactatatccaaaa-gaaacattgttagtgttatactatatcgata 27886459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 27945168 - 27945117
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgata 114  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||| |||||||    
T  27945168 agtgttatactatatccaaaa-gaaacattgttagtgttatactatatcgata 27945117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 28025411 - 28025360
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgata 114  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||| |||||||    
T  28025411 agtgttatactatatccaaaa-gaaacattgttagtgttatactatatcgata 28025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 34900770 - 34900818
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  34900770 atctcctctcctccattcccatcatcaagatacagatcaacttccaaat 34900818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 45216621 - 45216657
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaat 231  Q
    |||||||||||||||||||||||| ||||||||||||    
T  45216621 atctcctctcctccattcccatcatcaagatacaaat 45216657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 5818143 - 5818185
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatc 110  Q
    |||||||||| ||||| |||||||||||||||||||||||||||    
T  5818143 tatactatattcaaaa-ggaacattgttagtgctatactacatc 5818185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 32913 - 32844
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||| || ||| ||| ||| ||||| ||||    
T  32913 agtgttatactatatccaaaa-gaaacattgttagtgttatactatattgatccaaaaaaaaagcattata 32844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 3892207 - 3892173
Alignment:
Q  153 tactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||| |||||||||||||||||||    
T  3892207 tactcaagagttaagttattttagttaacattaat 3892173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 5818206 - 5818240
Alignment:
Q  153 tactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||| |||||||||||||||||||    
T  5818206 tactcaagagttaagttattttagttaacattaat 5818240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 25022631 - 25022525
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| |||  || | || || |||||||||||||| |||||||| || |||||||||| || ||| ||| |||||| ||     
T  25022631 ataccaaaaagagcaccatcagtgttat--atcaatgctacactatatccaaaaa-gaacattgataatgctatactatattgatccaaaaaagaaacac 25022535  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  25022534 tatatccaaa 25022525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 42949546 - 42949440
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    |||||||||||||||||||| ||| ||||  | | || |||  |||||| |||||  |||||||||||||| |||||| |||||| ||| |||||||||     
T  42949546 ataccaaaaagagcatcatcggtgttata--tcaatgctattttatatc-aaaaataaacattgttagtgcgatactatatcgatccaaaaaagaagcac 42949450  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  42949449 tatatccaaa 42949440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 5540139 - 5540091
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||| |||| |||||| ||||||||||||||  ||||||||    
T  5540139 atctcctctccttcattaccatcatcaagatacaaatcaacttccaaat 5540091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 3212902 - 3212722
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||||||||| ||||||| ||||||||||||| ||||||| ||||||  || ||| ||||| |||||  ||||||||||| ||||||||||||||    
T  3212902 agtgatatactatattcaaaaag-aacattgttagtgttatactatatcgatctaaaaaataagcactatatcaaaaaaagaacacatcagtactcaaga 3212804  T
Q  162 gttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  3212803 gttaagttattttagttaacattaatcgtctcaatctcctctcctccatttccatcaacaagatacaaaccagcttccaaat 3212722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 10894304 - 10894428
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||||||| ||||| ||| |||||||| |||| ||||| |||    
T  10894304 agtgctatactatatccaaaa-ggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaacaaagaacacatcaatactcgaga 10894402  T
Q  162 gttaagctattttagttaacattaat 187  Q
    ||||||  ||||||||||||||||||    
T  10894403 gttaagtaattttagttaacattaat 10894428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 7255255 - 7255130
Alignment:
Q  62 agtgttatactatatccaaaaaggaacatt-gttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaag 160  Q
    |||| |||||||||||||||| |||||||| |||| || ||||||| |||||| ||| ||||||||| |||||  |||||| |||| |||||||||||||    
T  7255255 agtgctatactatatccaaaa-ggaacatttgttaatgttatactatatcgatccaaaaaagaagcactatatcaaaaaaataacacatcagtactcaag 7255157  T
Q  161 agttaagctattttagttaacattaat 187  Q
    ||||||| ||||| |||||||||||||    
T  7255156 agttaagttatttaagttaacattaat 7255130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 32018424 - 32018257
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||| ||  || |||||| || |||||  ||||||||||| || ||||||||||||||||    
T  32018424 tatactatatccaaaaag-aacattgttagtgttatactatatcaatctaaaaaagaaacactatatcgaaaaaagaacacat-agtactcaagagttaa 32018327  T
Q  167 gctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    | ||||||||||||||       ||||||| |||| || |||||| ||||||| |||||||||| ||| ||||||||    
T  32018326 gttattttagttaaca-------tctcaatttcctatcttccatttccatcaataagatacaaaccagcttccaaat 32018257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 7188018 - 7188154
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||||||||||| | || || ||||||||| ||||||||| ||||||||||||||||| |||||| ||| |||||| ||     
T  7188018 ataccaaaaagagcaccatcagtgctatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcac 7188115  T
Q  129 tatat--acaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||  | ||||||||||| ||||||||| |||||||||    
T  7188116 tatatccaaaaaaaagaacacatcagtact-aagagttaa 7188154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 187
Target Start/End: Original strand, 6707830 - 6707950
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaa-gaagcaatatatacaaaaaagaacatatcagtactcaagagtta 165  Q
    |||||||||||||||| | ||||||||||||| ||||||| || ||| ||| ||| |||||| ||||| || ||||||||| |||| |||||||||||||    
T  6707830 tatactatatccaaaatg-aacattgttagtgttatactatattgatccaaaaaaagaagcattatatccataaaagaacacatcaatactcaagagtta 6707928  T
Q  166 agctattttagttaacattaat 187  Q
    || ||||||||| |||||||||    
T  6707929 agttattttagtcaacattaat 6707950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 31740454 - 31740562
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    |||||||||| ||||  ||||||| ||||||| | ||||||| ||||||||||| ||||||||||||||||||||||| |||||| ||| |||||||||     
T  31740454 ataccaaaaatagcacaatcagtgttatacatcaatgttatattatatccaaaa-ggaacattgttagtgctatactatatcgatccaaaaaagaagcac 31740552  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  31740553 tatatccaaa 31740562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 22988963 - 22989074
Alignment:
Q  135 caaaaaagaacatatcagtactcaagagttaa-gctattttagttaaca---ttaatcgtctcaatctcctctcctccattcccatcaacaagatacaaa 230  Q
    |||||||||||| ||| || |||||||||||| | ||||||||||||||   ||||| |||||||||| ||||||||||||| ||||| |||||||||||    
T  22988963 caaaaaagaacacatc-gttctcaagagttaaagttattttagttaacaatattaattgtctcaatcttctctcctccattcacatcatcaagatacaaa 22989061  T
Q  231 tcagtttccaaat 243  Q
    |||| ||||||||    
T  22989062 tcagcttccaaat 22989074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 23799433 - 23799322
Alignment:
Q  135 caaaaaagaacatatcagtactcaagagttaa-gctattttagttaaca---ttaatcgtctcaatctcctctcctccattcccatcaacaagatacaaa 230  Q
    |||||||||||| ||| || |||||||||||| | ||||||||||||||   ||||| |||||||||| ||||||||||||| ||||| |||||||||||    
T  23799433 caaaaaagaacacatc-gttctcaagagttaaagttattttagttaacaatattaattgtctcaatcttctctcctccattcacatcatcaagatacaaa 23799335  T
Q  231 tcagtttccaaat 243  Q
    |||| ||||||||    
T  23799334 tcagcttccaaat 23799322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 31195590 - 31195725
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| || ||||| ||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| |||||| ||     
T  31195590 ataccaaaaagagcaccagcagtgttatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaatcac 31195687  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| | ||||||| |||||||||    
T  31195688 tatatccaaaaaaagaacacaacagtact-aagagttaa 31195725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 8357755 - 8357624
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| ||||||| |||||||| | ||||  ||||||  | ||||||||| |||||||| ||||| || || ||| ||| ||||||||| ||||    
T  8357755 caaaaagagcaccatcagtactatacatcaatgttgcactataatccaaaaggaac-ttgttagtactatattatattgatccaaaaaagaagcactata 8357657  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | |||||||||||| ||||||||| |||||||||    
T  8357656 tccaaaaaagaacacatcagtact-aagagttaa 8357624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 13061159 - 13061283
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||||||||||||| |||| | |||| ||  |||||||||||||| |||||| ||| ||||||||  ||||| ||||||| |||| |||| ||||||| |    
T  13061159 agtgttatactatacccaaga-ggaagatcattagtgctatactatatcgatccaaaaaagaagcgctatatccaaaaaataacacatcaatactcaaaa 13061257  T
Q  162 gttaagctattttagttaacattaat 187  Q
     ||||| |||||||||||| ||||||    
T  13061258 attaagttattttagttaatattaat 13061283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 11105620 - 11105495
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatat-acaaaaaagaacatatcagtactcaag 160  Q
    ||||||||  ||||||||||| | ||||||||||||| ||||||| ||| || ||| | ||||||| | ||| | |||||||||||||||| ||||||||    
T  11105620 agtgttattttatatccaaaatg-aacattgttagtgttatactatatcaatccaaaagagaagcactgtattaaaaaaaagaacatatcaatactcaag 11105522  T
Q  161 agttaagctattttagttaacattaat 187  Q
    | ||||  ||||||| |||||||||||    
T  11105521 aattaatttattttatttaacattaat 11105495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 19128464 - 19128395
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| |||||| ||| ||||||||| ||||    
T  19128464 agtgttatactatatccaaaa-gaaacattgttagtgctatactatatcgatccaaaaaagaagcactata 19128395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 32130299 - 32130405
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| |||| |  | ||||||||| ||||||||| |||||||||||| |||||||||| || ||| ||| |||||||||     
T  32130299 ataccaaaaagagcaccatcagtgttatata--aatgttatactttatccaaaa-ggaacattgttaatgctatactatattgatccaaaaaagaagcac 32130395  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  32130396 tatatccaaa 32130405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 26327628 - 26327524
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||||||||||||||| |||| | | ||||||||||| ||||||| || ||| ||| ||||||||| ||||| || ||||||||| ||| |||||| |||    
T  26327628 agtgttatactatatctaaaatgta-cattgttagtgttatactatattgatccaaaaaagaagcactatatccataaaagaacacatcggtactccaga 26327530  T
Q  162 gttaag 167  Q
    ||||||    
T  26327529 gttaag 26327524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 234620 - 234551
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||||||||||| | |||||||| |||||||||||| |||||| ||| ||||||||| ||||    
T  234620 agtgttatactatatccaaaa-gaaacattgtcagtgctatactatatcgatccaaaaaagaagcactata 234551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 1036063 - 1036190
Alignment:
Q  37 aagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatac- 135  Q
    ||||||| |||||||| ||||||| | || || ||||||||| |||| |||| ||||||||| ||||||| |||||| ||| |||||| || ||||| |     
T  1036063 aagagcaccatcagtgttatacatcaatgctacactatatcc-aaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactatatcca 1036160  T
Q  136 aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||||||||| ||||||||| |||||||||    
T  1036161 aaaaaagaacacatcagtact-aagagttaa 1036190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 22988911 - 22988972
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaa 124  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| |||||| ||| ||||||    
T  22988911 agtgttatactgtatccaaaa-ggaacattgttagtgctatactatatcgatccaaaaaagaa 22988972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 23799485 - 23799424
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaa 124  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| |||||| ||| ||||||    
T  23799485 agtgttatactgtatccaaaa-ggaacattgttagtgctatactatatcgatccaaaaaagaa 23799424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 27084285 - 27084216
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||||||| ||| |||||||||||||| |||||||| |||||| ||| ||||||||| ||||    
T  27084285 agtgttatactatatccgaaa-ggaacattgttagttctatactatatcgattcaaaaaagaagcactata 27084216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 7188179 - 7188227
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  7188179 atctcctctcctccattcccatcatcaagatacaaatcaacttccaaat 7188227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 31079876 - 31079813
Alignment:
Q  119 aaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaaca 182  Q
    |||||| || ||||| |||||||||||| ||||||| |||||| ||||| ||||||||||||||    
T  31079876 aaagaaacactatatccaaaaaagaacacatcagtattcaagatttaagttattttagttaaca 31079813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 8357600 - 8357551
Alignment:
Q  194 aatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||| |||||| |||||||||||| || ||||||||    
T  8357600 aatctcctctcctccattaccatcatcaagatacaaataagcttccaaat 8357551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 1036215 - 1036263
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  1036215 atctcctctcctccattcccatcatcaagatacagatcaacttccaaat 1036263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 13045172 - 13045285
Alignment:
Q  68 atactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaag 167  Q
    ||||||||||||||| |||| || ||||||| ||||||| ||| || ||| ||||||    ||||| ||||||| ||||     ||||||||||||||||    
T  13045172 atactatatccaaaa-ggaagatcgttagtgttatactatatcaatccaaaaaagaaatgctatatccaaaaaataaca-----gtactcaagagttaag 13045265  T
Q  168 ctattttagttaacattaat 187  Q
     |||||||||| ||||||||    
T  13045266 ttattttagttgacattaat 13045285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 13607643 - 13607694
Alignment:
Q  136 aaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    |||||| |||| |||| ||||||||| ||||| |||||||||||||||||||    
T  13607643 aaaaaaaaacacatcaatactcaagaattaagttattttagttaacattaat 13607694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 27084217 - 27084183
Alignment:
Q  153 tactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||| |||||||||||||||||||    
T  27084217 tactcaagagttaagttattttagttaacattaat 27084183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 24784700 - 24784525
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||| ||  || ||||||||| |||||  ||||||||||| |||||||||||||||||||    
T  24784700 tatactatatccaaaaag-aacattgatagtgctatactatatcaatctaaaaaagaagcactatatcgaaaaaagaacacatcagtactcaagagttaa 24784602  T
Q  167 gctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||||||||    
T  24784601 gttattttagttaacattaatcgtctcaatcttctctcctccatttccatcaacaagatacaaaccagcttccaaat 24784525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 52721682 - 52721507
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||| ||||||| ||||||||||||| ||||||| ||||||  || ||||||||| |||||  ||||||||||| |||||||||||||||||||    
T  52721682 tatactatattcaaaaag-aacattgttagtgttatactatatcgatctaaaaaagaagcactatatcgaaaaaagaacacatcagtactcaagagttaa 52721584  T
Q  167 gctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || |||||    
T  52721583 gttattttagttaacattaatcgtctcaatctcctctcctccatttccatcaacaagatacaaaccagctttcaaat 52721507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 39958020 - 39957841
Alignment:
Q  63 gtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagag 162  Q
    ||||||||||||||| |||||| ||||||||||||||||||||| ||||||  || ||||||||| |||||  ||||||||||| ||||||| ||||||     
T  39958020 gtgttatactatatctaaaaag-aacattgttagtgctatactatatcgatctaaaaaagaagcactatatcgaaaaaagaacacatcagtattcaagaa 39957922  T
Q  163 ttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||  || ||||||||    
T  39957921 ttaagttattttagttaacattaatcgtctcaatatcctctcctccatttccatcaacaagatacaaactagcttccaaat 39957841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 24793516 - 24793640
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| ||||||  || |||||| || |||||  ||||||||||| ||||||||||||||    
T  24793516 agtgttatactatatccaaaa-ggaacattgttagtgttatactatatcgatctaaaaaagaaacactatatttaaaaaagaacacatcagtactcaaga 24793614  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||||||||||||||||    
T  24793615 gttaagttattttagttaacattaat 24793640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 44521831 - 44521955
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||||||||||||||| |||||||||||| || ||||||| |||||| ||| ||||||||| ||||| |||||||||||| || |||||||||||    
T  44521831 agtgctatactatatccaaaa-ggaacattgttaatgttatactatatcgatccaaaaaagaagcattatattcaaaaaagaacacattagtactcaaga 44521929  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||||||||||||||||    
T  44521930 gttaagttattttagttaacattaat 44521955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 3109091 - 3109214
Alignment:
Q  63 gtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagag 162  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||||  || |||||| || ||||| ||||||| |||| |||||||||||||||    
T  3109091 gtgttatactatatccaaaa-ggaacattgttagtgttatactatatcgatctaaaaaagaaacactatattcaaaaaataacacatcagtactcaagag 3109189  T
Q  163 ttaagctattttagttaacattaat 187  Q
    ||||| |||||||||||||||||||    
T  3109190 ttaagttattttagttaacattaat 3109214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 67 - 189
Target Start/End: Original strand, 24823566 - 24823687
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||| ||  || ||||||||| |||||  ||||||||||| |||||||||||||||||||    
T  24823566 tatactatatccaaaaag-aacattgatagtgctatactatatcaatctaaaaaagaagcactatatcgaaaaaagaacacatcagtactcaagagttaa 24823664  T
Q  167 gctattttagttaacattaatcg 189  Q
    | |||||||||||||||||||||    
T  24823665 gttattttagttaacattaatcg 24823687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 36944002 - 36943878
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||| ||||||  || |||||| || ||||| |||||||||||| |||| |||||||||    
T  36944002 agtgttatactatatccaaaa-ggaacattgttagtattatactatatcgatctaaaaaagaaacactatattcaaaaaagaacacatcactactcaaga 36943904  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||||||||||||||||    
T  36943903 gttaagttattttagttaacattaat 36943878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 53323218 - 53323084
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    |||||||||||||||||||||||||||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| |||||||||     
T  53323218 ataccaaaaagagcatcatcagtgctatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaagcac 53323121  T
Q  129 tatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | ||| |||||||||||| ||||||||| |||||||||    
T  53323120 tgtatccaaaaaagaacacatcagtact-aagagttaa 53323084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 17892581 - 17892457
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||| ||| ||  || |||||| || ||||| |||||||||||| ||||||||||||||    
T  17892581 agtgttatactatattcaaaa-ggaacattgttagtgttatactatatcaatctaaaaaagaaacactatattcaaaaaagaacacatcagtactcaaga 17892483  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||| ||||||||||||    
T  17892482 gttaagttatttttgttaacattaat 17892457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 41146479 - 41146349
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| |||||||||||||||| | || || ||||||||||||| ||||| ||||||||| ||||||| |||||| ||| ||||||||| ||||    
T  41146479 caaaaagagcaccatcagtgctatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgttatactatatcgattcaaaaaagaagcactata 41146382  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | |||||||||||| ||||||||| |||||||||    
T  41146381 tccaaaaaagaacacatcagtact-aagagttaa 41146349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 55900933 - 55901057
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||| ||||||||||| | ||||||||||||| ||||||| |||||| ||| ||||||||| ||||| || ||||||||| ||||||||||||||    
T  55900933 agtgctatattatatccaaaatg-aacattgttagtgttatactatatcgatccaaaaaagaagcattatatccataaaagaacacatcagtactcaaga 55901031  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| | ||||||| | |||||||    
T  55901032 gttaagtttttttagtcaccattaat 55901057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 42630263 - 42630393
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatat------acaaaaaagaacatatcagtac 155  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||| |||||      | ||||||||||| || |||||    
T  42630263 agtgttatactctatccaaaa-ggaacattgttagtgttatactacatcgattcaaaaaagaagcattatatccaaaaaaaaaaaagaacacataagtac 42630361  T
Q  156 tcaagagttaagctattttagttaacattaat 187  Q
    | ||||||| || |||||||||||||||||||    
T  42630362 tgaagagttcagttattttagttaacattaat 42630393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 46431748 - 46431842
Alignment:
Q  92 gttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||  |||||| ||| ||||||| | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  46431748 gttagtgctatactttatcgatccaa-aaagaagtagtatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaacattaat 46431842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 138
Target Start/End: Complemental strand, 28377372 - 28377268
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| |||||||| ||||||| | || |||| ||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||||| ||||    
T  28377372 caaaaagagcaccatcagtgttatacatcaatgctatattatatccaaaaag-aacattgttagtgctatactatatcgatccaaaaaagaagcactata 28377274  T
Q  133 tacaaa 138  Q
    | ||||    
T  28377273 tccaaa 28377268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 52573064 - 52572858
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||||||||||| | || || ||||||||| ||||||||| ||||||||||||||||| |||||| |    || |||||     
T  52573064 ataccaaaaagagcaccatcagtgctatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgctatactatatcgatcc----aaaaagcac 52572971  T
Q  129 tatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagataca 228  Q
    ||||| |||||||||||| ||||||||| ||||||||| |  |   |  ||||  ||| ||| |  |||| ||||||||||||||||||| |||||||||    
T  52572970 tatatccaaaaaagaacacatcagtact-aagagttaa-cactaacaagtaac--taa-cgtttacatctactctcctccattcccatcatcaagataca 52572876  T
Q  229 aatcagtttccaaatatg 246  Q
    |||||| |||||||||||    
T  52572875 aatcagcttccaaatatg 52572858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 31227220 - 31227109
Alignment:
Q  28 cataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    |||||||||||||||||||| |||||||||||| | || || ||||||||| ||||||||| ||||||||||||||||| |||||| ||| ||||||  |    
T  31227220 cataccaaaaagagcatcatgagtgctatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatta 31227123  T
Q  128 atatatacaaaaaa 141  Q
     |||||| ||||||    
T  31227122 ctatataaaaaaaa 31227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 3402813 - 3402948
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    |||||||||||||||  || |||| ||||||| | || || ||||||||| ||||||||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  3402813 ataccaaaaagagcacaataagtgttatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgatatactatatcgatccaaaaaagaatcac 3402910  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  3402911 tatatccaaaaaaagaacacatcagtact-aagagttaa 3402948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 14795882 - 14795751
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| |||||||||||||||| | || || ||| ||||| ||||||||| ||||||||||||||||| |||||| | | |||||| || ||||    
T  14795882 caaaaagagcaccatcagtgctatacatcaatgctacactgtatcc-aaaaggaac-ttgttagtgctatactatatcgatccgaaaaagaatcactata 14795785  T
Q  133 tac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    | | ||||||||||| |||| |||| |||||||||    
T  14795784 tccaaaaaaagaacacatcaatact-aagagttaa 14795751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 258876 - 258941
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| || ||| ||| |||||||||    
T  258876 agtgttatactatatccaaaacggaacattgttactgctatactatattgatccaaaaaagaagca 258941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 5835274 - 5835201
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaa 138  Q
    ||||||||||||||||||| |||||||||||| |||||||||| ||||||  || ||||||||| ||||| ||||    
T  5835274 tgttatactatatccaaaa-ggaacattgttaatgctatactatatcgatcaaaaaaagaagcactatatccaaa 5835201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 8063344 - 8063471
Alignment:
Q  37 aagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatac- 135  Q
    ||||||| |||||||| ||||||| | || || ||||||||| |||| |||| ||||||||| ||||||| |||||| ||| |||||| || ||||| |     
T  8063344 aagagcaccatcagtgttatacatcaatgctacactatatcc-aaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactatatcca 8063441  T
Q  136 aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||||||||| ||||||||| |||||||||    
T  8063442 aaaaaagaacacatcagtact-aagagttaa 8063471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 722441 - 722538
Alignment:
Q  89 attgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaa 186  Q
    ||||||||||  |||||| ||| || ||| |||||| || ||||| ||||||| |||| |||| ||| ||||||||||| || |||||||||||||||    
T  722441 attgttagtgtcatactatatctatccaaaaaagaaacactatattcaaaaaataacacatcaatacacaagagttaagttagtttagttaacattaa 722538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 3402973 - 3403021
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  3402973 atctcctctcctccattcccatcatcaagatacaaatcaacttccaaat 3403021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 31227057 - 31227009
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  31227057 atctcctctcctccattcccatcatcaagatacaaatcaacttccaaat 31227009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 41146324 - 41146276
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  41146324 atctcctctcctccattcccataatcaagatacaaatcagcttccaaat 41146276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 53323059 - 53323011
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| |||||||||||| || ||||||||    
T  53323059 atctcctctcctccattcccatcatcaagatacaaattagcttccaaat 53323011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 2586596 - 2586545
Alignment:
Q  136 aaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||| |||||| || |||||||||| |||||||||||||||||||    
T  2586596 aaaaaagaacacatcagtcctgaagagttaagttattttagttaacattaat 2586545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 49470604 - 49470489
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||||||||| |||||||||||||||  |||||| ||||||| || ||| |  |    ||| ||||||||   | || ||||||||||||||||    
T  49470604 tatactatatccaaaa-ggaacattgttagtgacatactatatcgataaaaaaaaaacac----tatccaaaaaagtttacatgagtactcaagagttaa 49470510  T
Q  167 gctattttagttaacattaat 187  Q
    | |||||||||||||||||||    
T  49470509 gttattttagttaacattaat 49470489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 1177288 - 1177219
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| |||||||||||||||| | ||||||||||||||||||||| ||| || ||| ||||||||| ||||    
T  1177288 agtgctatactatatccaaaa-gaaacattgttagtgctatactatatcaatccaaaaaagaagcattata 1177219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 754465 - 754380
Alignment:
Q  101 atactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaa 186  Q
    |||||| ||| || ||| |||||| || ||||| ||||||| |||| |||| ||| ||||||||||| || |||||||||||||||    
T  754465 atactatatctatccaaaaaagaaacactatattcaaaaaataacacatcaatacacaagagttaagttagtttagttaacattaa 754380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 51859106 - 51859042
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    |||| |||||||||||||||| | ||||||||||||| ||||||| |||||| ||| |||||||||    
T  51859106 agtgctatactatatccaaaa-gaaacattgttagtgttatactatatcgatccaaaaaagaagca 51859042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 8063496 - 8063544
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  8063496 atctcctctcctccattcccatcatcaagatacagatcaacttccaaat 8063544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 14795726 - 14795678
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||| ||||||||||| ||||||||||||||  ||||||||    
T  14795726 atctcctctccttcattcccatcatcaagatacaaatcaacttccaaat 14795678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 31946034 - 31946102
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| ||||||||||| |||| ||||||||||||||||||||| | |||||| ||| ||||||||| ||||    
T  31946034 agtgctatactatatctaaaa-ggaacattgttagtgctatac-atatcgatccaaaaaagaagcactata 31946102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 36511740 - 36511809
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| |||||||||||||||| | |||||| ||||||||||| || |||||| ||| ||||||||| ||||    
T  36511740 agtgctatactatatccaaaa-gaaacattcttagtgctatattatatcgatccaaaaaagaagcactata 36511809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 37992394 - 37992436
Alignment:
Q  138 aaaagaacatatcagtactcaagagttaagctattttagttaa 180  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||    
T  37992394 aaaagaacacatcggtactcaagagttaagttattttagttaa 37992436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 40694381 - 40694312
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| |||| ||||||||||| | |||||||||||| |||||||| |||||| ||| ||||||||| ||||    
T  40694381 agtgatatattatatccaaaa-gaaacattgttagtactatactatatcgattcaaaaaagaagcattata 40694312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 51859038 - 51859004
Alignment:
Q  153 tactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||| |||||||||||||||||||    
T  51859038 tactcaagagttaagttattttagttaacattaat 51859004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 38492042 - 38492136
Alignment:
Q  70 actatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||| ||| |||||| |  ||||| | ||||||||||| |||| |||| |||||||||    
T  38492042 actatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaatccctatatccaaaaaaagaacacatcattact-aagagttaa 38492136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 5325258 - 5325340
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgat 113  Q
    ||||||||||||||| ||| |||||||||||| | || || | ||||||| ||||||||| ||||||||| ||| ||| ||||||    
T  5325258 ataccaaaaagagcaccataagtgctatacatcaatgctacattatatcc-aaaaggaac-ttgttagtgttatgctatatcgat 5325340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 1e-52; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 52684659 - 52684480
Alignment:
Q  63 gtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagag 162  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| ||||||  || ||||||||| |||||  ||||||||||| || ||||||||| ||    
T  52684659 gtgttatactatatccaaaaag-aacattgttagtgttatactatatcgatctaaaaaagaagcactatatcgaaaaaagaacacattagtactcaatag 52684561  T
Q  163 ttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    || || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | | ||||||||    
T  52684560 ttgagttattttagttaacattaatcgtctcaatctcctctcctccatttccatcaacaagatacaaaactgcttccaaat 52684480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 2567063 - 2567234
Alignment:
Q  71 ctatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagcta 170  Q
    |||||||||||||| ||||||||  ||| ||||||| ||||||  || || |||||| |||||  ||||||||||| |||||||||||||||||||| ||    
T  2567063 ctatatccaaaaag-aacattgtatgtgttatactatatcgatctaaaaaggaagcactatatcgaaaaaagaacacatcagtactcaagagttaagtta 2567161  T
Q  171 ttttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||  ||||||||    
T  2567162 ttttagttaacattaatcgtctcaatctcctctcctccatttccatcaacaagatacaaaccaacttccaaat 2567234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 67 - 243
Target Start/End: Original strand, 21006153 - 21006328
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||||  || ||||||||| |||||  ||||||||||| |||  ||||||| ||||||    
T  21006153 tatactatatccaaaaag-aacattgttagtgttatactatatcgatctaaaaaagaagcattatatcgaaaaaagaacacatcgatactcaatagttaa 21006251  T
Q  167 gctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    | ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||| ||||||||    
T  21006252 gttattttatttaacattaatcgtctcaatctcctctccaccatttccatcaacaatatacaaaccagcttccaaat 21006328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 30787350 - 30787470
Alignment:
Q  66 ttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagtta 165  Q
    |||||||||||| |||| ||||||||||||||||||||||| |||||| ||| ||||||||| ||||| ||||||| |||| ||||||||||||||||||    
T  30787350 ttatactatatctaaaa-ggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaaaaaataacacatcagtactcaagagtta 30787448  T
Q  166 agctattttagttaacattaat 187  Q
    || |||||||||||||||||||    
T  30787449 agttattttagttaacattaat 30787470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 187
Target Start/End: Original strand, 13352985 - 13353104
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||||||||| ||||||||||||||||||||||   ||||| ||| ||||||||| |||||  ||||||||||| |||||||||||||||||||    
T  13352985 tatactatatccaaaa-ggaacattgttagtgctatactgtgtcgatccaaaaaagaagcactatatcaaaaaaagaacacatcagtactcaagagttaa 13353083  T
Q  167 gctattttagttaacattaat 187  Q
    | |||||||||||||||||||    
T  13353084 gttattttagttaacattaat 13353104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 47642337 - 47642215
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagt 163  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| ||||||  || |||||| |  ||||| |||||||||||| ||||||||||||||||    
T  47642337 tgttatactatatccaaaaag-aacattgttagtgttatactatatcgatctaaaaaagaaacgctatattcaaaaaagaacacatcagtactcaagagt 47642239  T
Q  164 taagctattttagttaacattaat 187  Q
    |||| |||||||||||||||||||    
T  47642238 taagttattttagttaacattaat 47642215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 25936318 - 25936452
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| ||| |||||||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| |||||||||     
T  25936318 ataccaaaaagagcaccattagtgctatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaagcac 25936415  T
Q  129 tatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| |||||||||||| ||||||||| |||||||||    
T  25936416 tatatccaaaaaagaacacatcagtact-aagagttaa 25936452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 28968842 - 28968720
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagt 163  Q
    ||||||||||||||||||| | ||||||||||||| |||| || ||||||  || |||||| || ||||| |||||||||||| |||| |||||||||||    
T  28968842 tgttatactatatccaaaatg-aacattgttagtgttatattatatcgatctaaaaaagaaacactatattcaaaaaagaacacatcattactcaagagt 28968744  T
Q  164 taagctattttagttaacattaat 187  Q
    |||| |||||||||||||||||||    
T  28968743 taagttattttagttaacattaat 28968720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 7899504 - 7899627
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||||||||||| |||||||| | ||||||| ||||||||||||| |||||| |||   ||||||| |||||  ||||||||||| ||||||||||||||    
T  7899504 agtgttatactacatccaaaa-gaaacattgctagtgctatactatatcgatccaaacgagaagcactatatt-aaaaaagaacacatcagtactcaaga 7899601  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||||||||||||||||    
T  7899602 gttaagttattttagttaacattaat 7899627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 19421730 - 19421625
Alignment:
Q  82 aaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaac 181  Q
    ||||||||||||||||| ||||||| |||||| ||| ||||||||| ||||| |||||||||| | |||||| ||||||||||||| |||||| ||||||    
T  19421730 aaggaacattgttagtgttatactatatcgattcaaaaaagaagcactatatccaaaaaagaatacatcagtgctcaagagttaagttattttggttaac 19421631  T
Q  182 attaat 187  Q
    ||||||    
T  19421630 attaat 19421625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 19878887 - 19879011
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||| ||||||||||| |||| |||||||||| |||| || |||||| ||| |||||| || |||||  ||||||||||| ||||||||||||||    
T  19878887 agtgctataatatatccaaaa-ggaatattgttagtgatatattatatcgatccaaaaaagaaacattatatcaaaaaaagaacacatcagtactcaaga 19878985  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||||||||||||||||    
T  19878986 gttaagttattttagttaacattaat 19879011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 45057086 - 45057210
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||||||||| ||||| | ||||||||||||| | ||||| |||||| ||| ||| ||||| ||||| |||||||||||| || |||||||||||    
T  45057086 agtgctatactatatacaaaa-gaaacattgttagtgttgtactatatcgatccaaaaaataagcattatatccaaaaaagaacacattagtactcaaga 45057184  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||||||||||||||||    
T  45057185 gttaagttattttagttaacattaat 45057210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 22610520 - 22610650
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||  ||||||| ||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| ||||||||| ||||    
T  22610520 caaaaagagcactatcagtgttatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactata 22610617  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | |||||||||||| ||||||||| |||||||||    
T  22610618 tccaaaaaagaacacatcagtact-aagagttaa 22610650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 45532306 - 45532436
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| |||||||||||||||| | || || ||||||||||||| ||||| |||||||||||||| || ||| || ||| ||||||||| ||||    
T  45532306 caaaaagagcaccatcagtgctatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatattatatcaatccaaaaaagaagcactata 45532403  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | |||||||||||| ||||||||| |||||||||    
T  45532404 tccaaaaaagaacacatcagtact-aagagttaa 45532436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 187
Target Start/End: Original strand, 20509946 - 20510065
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||||||||| | ||||||||||||| |||||||  ||||| ||| ||||||||| ||||| || ||||||| | |||| || |||||||||||    
T  20509946 tatactatatccaaaatg-aacattgttagtgttatactatgtcgatccaaaaaagaagcactatatccataaaagaatacatcactattcaagagttaa 20510044  T
Q  167 gctattttagttaacattaat 187  Q
    | ||||||||| |||||||||    
T  20510045 gttattttagtcaacattaat 20510065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 22311207 - 22311101
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| ||||  | | ||||||||||||||||||| |||||||||||| |||||||||| |||||| ||| |||||||||     
T  22311207 ataccaaaaagagcaccatcagtgttata--tcaatgttatactatatccaaaa-ggaacattgttaatgctatactatatcgatccaaaaaagaagcac 22311111  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  22311110 tatatccaaa 22311101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 37996530 - 37996665
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| || ||||| ||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| |||||| ||     
T  37996530 ataccaaaaagagcaccagcagtgttatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaatcac 37996627  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  37996628 tatatccaaaaaaagaacacatcagtact-aagagttaa 37996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 21157522 - 21157638
Alignment:
Q  72 tatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaa-aagaacatatcagtactcaagagttaagcta 170  Q
    |||||||  ||| |||||||||||||||||||||| ||| ||  || ||||||||| ||||| ||||| ||||||| |||| ||||| ||||||||| ||    
T  21157522 tatatccccaaaagaacattgttagtgctatactatatcaatcaaaaaaagaagcactatatccaaaaaaagaacacatcaatactcgagagttaagtta 21157621  T
Q  171 ttttagttaacattaat 187  Q
    ||||| |||||||||||    
T  21157622 ttttaattaacattaat 21157638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 25701096 - 25700970
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaata-aagaagcaatatat-acaaaaaagaacatatcagtactcaa 159  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||| ||||||| || | || || || ||||| | |||||| |||| || |||||||||    
T  25701096 agtgctatactatatccaaaa-ggaacattgttagtgttatactatatcgataaaaaataaaaaacactatataaaaaaaaaaaacacataagtactcaa 25700998  T
Q  160 gagttaagctattttagttaacattaat 187  Q
    |||||||| ||||||||| |||||||||    
T  25700997 gagttaagttattttagtaaacattaat 25700970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 38888897 - 38888995
Alignment:
Q  90 ttgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaa-catatcagtactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||||  ||| || ||| ||| ||||| ||||| |||||||||| || | |||||||||||||||||| |||||||||||||||||||    
T  38888897 ttgttagtgctatactttatcaatccaaaaaataagcactatatccaaaaaagaaacacaccagtactcaagagttaagttattttagttaacattaat 38888995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 52505063 - 52505198
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    |||| |||||||||| ||| |||||||||||| | || || ||||||||| ||||||||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  52505063 atactaaaaagagcaccattagtgctatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcat 52505160  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  52505161 tatatccaaaaaaagaacacatcagtact-aagagttaa 52505198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 42229973 - 42229906
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||||||||| |||| |||||||||||||||||| |||||| ||| ||||||||||||||    
T  42229973 tgttatactatatccaaaa-ggaatattgttagtgctatactatatcgattcaaaaaagaagcaatata 42229906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 7328103 - 7327968
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| ||  |||| ||||||| | || || ||||||||| ||||||||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  7328103 ataccaaaaagagcaccagtagtgttatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcac 7328006  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  7328005 tatatccaaaaaaagaacacatcagtact-aagagttaa 7327968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 48123703 - 48123568
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||||||||||| | || || ||||||||| ||||||||| ||||| ||| |||||||  ||||| ||| |||||| ||     
T  48123703 ataccaaaaagagcaccatcagtgctatacatcaatgctacactatatcc-aaaaggaac-ttgtttgtgttatactatgtcgattcaaaaaagaatcac 48123606  T
Q  129 tatatacaaaaaa-gaacatatcagtactcaagagttaa 166  Q
    ||||| ||||||| || || ||||||||| |||||||||    
T  48123605 tatatccaaaaaatgaccacatcagtact-aagagttaa 48123568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 48334215 - 48334155
Alignment:
Q  63 gtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaa 124  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||    
T  48334215 gtgttatactatatccaaaaag-aacattgttagtgctatactatatcgatccaaaaaagaa 48334155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 983463 - 983395
Alignment:
Q  119 aaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    |||||| || ||||| |||||||||||| || ||||||||||||||||| | |||||||||||||||||    
T  983463 aaagaaacactatatccaaaaaagaacacataagtactcaagagttaagttgttttagttaacattaat 983395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 6134223 - 6134291
Alignment:
Q  119 aaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||| ||||| || |||| |||| |||||||||||||||||||| ||||||||| |||||||||    
T  6134223 aaagaagcattatatccataaaaaaacacatcagtactcaagagttaagttattttagtcaacattaat 6134291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 45532461 - 45532509
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  45532461 atctcctctcctccattcccatcatcaagatacaaatcagcttccaaat 45532509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 55268857 - 55268925
Alignment:
Q  119 aaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    ||||||| | ||||| ||||||| |||| |||||||||||||| ||||| |||||||||||||||||||    
T  55268857 aaagaagaactatatccaaaaaataacacatcagtactcaagacttaagttattttagttaacattaat 55268925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 1678920 - 1679055
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| ||||||| | || || ||||||| ||||| | | |  |||||||| ||||||| |||||| ||| |||||| ||     
T  1678920 ataccaaaaagagcaccatcagtgttatacatcaatgctacactatattcaaaatgaacc--tgttagtgatatactatatcgatccaaaaaagaatcac 1679017  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  1679018 tatatccaaaaaaagaacacatcagtact-aagagttaa 1679055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 19349411 - 19349480
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||||||||||| | |||||||| |||||||||||| |||||| ||| ||||||||| ||||    
T  19349411 agtgttatactatatccaaaa-gaaacattgtcagtgctatactatatcgatccaaaaaagaagcactata 19349480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 28882320 - 28882426
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| |||  || | ||||||||||||||| ||||| |||||||||| |||||||||| ||||||   | |||||||||     
T  28882320 ataccaaaaagagcaccatcagtgttat--atcaatgttatactatatcc-aaaagaaacattgttaatgctatactatatcgatcataaaaagaagcac 28882416  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  28882417 tatatccaaa 28882426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 35390194 - 35390121
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaa 138  Q
    ||||||||||||||||||| |||||||||||| || ||||||| |||||| ||| ||||||||| ||||| ||||    
T  35390194 tgttatactatatccaaaa-ggaacattgttaatgttatactatatcgatccaaaaaagaagcactatatccaaa 35390121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 48333273 - 48333212
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaa 124  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| |||||| ||| ||||||    
T  48333273 agtgttatactatatccaaaa-ggaatattgttagtgctatactatatcgatccaaaaaagaa 48333212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 50286987 - 50287093
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| ||||  | | ||||||||||||||||||| |||||||| ||  |||||||||| |||||| ||| |||||| ||     
T  50286987 ataccaaaaagagcaccatcagtgttata--tcaatgttatactatatccaaaa-ggaacattattgatgctatactatatcgatccaaaaaagaaacac 50287083  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  50287084 tatatccaaa 50287093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 138
Target Start/End: Complemental strand, 52121637 - 52121533
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| ||||| || ||||||| | | |||||||| |||||||| |||||||||||||||||||| || |||||| ||| |||  |||| ||||    
T  52121637 caaaaagagcaccatcactgttatacatcaatattatactacatccaaaa-ggaacattgttagtgctatattatatcgatccaaaaaaagagcactata 52121539  T
Q  133 tacaaa 138  Q
    | ||||    
T  52121538 tccaaa 52121533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 22289528 - 22289597
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||||||||||| | ||||||||||||| | ||||| |||||| ||| ||||||||| ||||    
T  22289528 agtgttatactatatccaaaa-gaaacattgttagtgttgtactatatcgatccaaaaaagaagcactata 22289597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 22610675 - 22610713
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatca 233  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  22610675 atctcctctcctccattcccatcatcaagatacaaatca 22610713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 52505223 - 52505261
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatca 233  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  52505223 atctcctctcctccattcccatcatcaagatacaaatca 52505261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 28705456 - 28705407
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaata 244  Q
    |||||||||||||||||||||||| ||||||||| ||||  |||||||||    
T  28705456 atctcctctcctccattcccatcatcaagatacagatcaacttccaaata 28705407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 212783 - 212715
Alignment:
Q  119 aaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||| | ||| |||||||||||| |||| ||||||||||||||   ||||||||| ||||||||    
T  212783 aaagaagcattttatccaaaaaagaacacatcaatactcaagagttaaataattttagttgacattaat 212715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 1679080 - 1679128
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  1679080 atctcctctcctccattcccatcatcaagatacagatcaacttccaaat 1679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 10224399 - 10224509
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||||||||||   || |||| | || || | ||||||| ||||||||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  10224399 ataccaaaaagagcatcatcaggaataaacatcaatgctacattatatcc-aaaaggaac-ttgttagtgttatactaaatcgatccaaaaaagaatcac 10224496  T
Q  129 tatatacaaaaaa 141  Q
    ||||| |||||||    
T  10224497 tatatccaaaaaa 10224509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 10224550 - 10224598
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    ||||| |||||||||||||||||| ||||||||||||||  ||||||||    
T  10224550 atctcttctcctccattcccatcatcaagatacaaatcaacttccaaat 10224598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 28705619 - 28705509
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| ||||| || ||||||| | || || ||||||||| |||| |||| ||||||||| ||| ||| |||||| ||| |||||| ||     
T  28705619 ataccaaaaagagcaccatcaatgttatacatcaatgctacactatatcc-aaaatgaac-ttgttagtgatattctatatcgatccaaaaaagaatcac 28705522  T
Q  129 tatatacaaaaaa 141  Q
    ||||| |||||||    
T  28705521 tatattcaaaaaa 28705509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 48123543 - 48123495
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||| ||||| ||||||||||||||  ||||||||    
T  48123543 atctcctctcctccattctcatcatcaagatacaaatcaacttccaaat 48123495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 29916103 - 29916053
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgat 113  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||| ||||||    
T  29916103 agtgttatactatatccaaaatg-aacattgttagtgttatactatatcgat 29916053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 29965256 - 29965206
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgat 113  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||| ||||||    
T  29965256 agtgttatactatatccaaaatg-aacattgttagtgttatactatatcgat 29965206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 2122952 - 2122918
Alignment:
Q  153 tactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||| |||||||||||||||||||    
T  2122952 tactcaagagttaagttattttagttaacattaat 2122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 28548305 - 28548251
Alignment:
Q  135 caaaaaagaacatatcagtactcaagagttaagctattttagttaacattaatcg 189  Q
    |||||||||||| || |  |||||||||||||| |||||||||||||||| ||||    
T  28548305 caaaaaagaacacattaagactcaagagttaagttattttagttaacatttatcg 28548251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 39664726 - 39664657
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| |||||||||||| ||||| |||||||| |||| ||||||| ||| |||||| ||||||||| ||||    
T  39664726 agtgctatactatatcc-aaaagaaacattgtcagtgttatactatatcaatacaaaaaagaagcactata 39664657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 9e-51; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 11907624 - 11907444
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    ||||||||||||||||||||| || |||||||| ||| |||| || |||||| ||| ||||||||| |||||  ||||||||| | ||||||||||| ||    
T  11907624 agtgttatactatatccaaaa-ggtacattgttggtgttataatatatcgatccaaaaaagaagcactatatcaaaaaaagaatacatcagtactcagga 11907526  T
Q  162 gttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || |||||    
T  11907525 gttaagttattttagttaacattaatcgtctcaatctcctctcctccattcccgtcatcaagatacaaatcagctttcaaat 11907444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 30777195 - 30777375
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||||||||| ||||||| ||||||||||||| ||||||| ||||||  || ||| ||||| |||||  ||||||||||| || | |||||||||    
T  30777195 agtgatatactatattcaaaaag-aacattgttagtgttatactatatcgatctaaaaaataagcactatatcaaaaaaagaacacataattactcaaga 30777293  T
Q  162 gttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  30777294 gttaaattattttagttaacattaatcgtctcaatctcctctcctccatttccatcaacaagatacaaaccagcttccaaat 30777375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 27085683 - 27085558
Alignment:
Q  61 gagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaag 160  Q
    ||||| |||||||||| ||||| | |||||||||||||||||| || |||||| ||| ||||||||| ||||| |||||||||||| |||||||||||||    
T  27085683 gagtgctatactatattcaaaatg-aacattgttagtgctatattatatcgatccaaaaaagaagcactatatccaaaaaagaacacatcagtactcaag 27085585  T
Q  161 agttaagctattttagttaacattaat 187  Q
    ||||||| |||||||||||||||||||    
T  27085584 agttaagttattttagttaacattaat 27085558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 17138056 - 17138163
Alignment:
Q  80 aaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagtta 179  Q
    |||||||||||||||||||||||| || ||| || ||| ||||||||| ||||| |||||||||||| |||| ||||||||||||||| |||||||||||    
T  17138056 aaaaggaacattgttagtgctatattatatcaatccaaaaaagaagcactatatccaaaaaagaacacatcaatactcaagagttaagttattttagtta 17138155  T
Q  180 acattaat 187  Q
    ||||||||    
T  17138156 acattaat 17138163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 22738168 - 22738047
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagt 163  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| |||||| ||| ||||||||| ||||| | |||||||||| |||||| |||||||||    
T  22738168 tgttatactatatccaaaa-ggaacattgttagtgttatactatatcgatccaaaaaagaagcactatat-ccaaaaagaacacatcagtgctcaagagt 22738071  T
Q  164 taagctattttagttaacattaat 187  Q
    |||  |||||||||||||||||||    
T  22738070 taaattattttagttaacattaat 22738047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 6242901 - 6242993
Alignment:
Q  136 aaaaaagaacatatcagtactcaagagttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagataca 228  Q
    ||||||||||| ||||||| | |||||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6242901 aaaaaagaacacatcagtatttaagagttaaattgttttagttaacattaatcgtctcaatctcctctcctccatttccatcaacaagataca 6242993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 244
Target Start/End: Original strand, 9729438 - 9729598
Alignment:
Q  80 aaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaa-gagttaagctattttagtt 178  Q
    |||||||||||||||| |||||||||| ||||||| || ||| |     |||||| |||||| |||| || |||||| || |||||||| ||||||||||    
T  9729438 aaaaggaacattgttaatgctatactatatcgataaaaaaaaaac----tatataaaaaaaa-aacacattagtacttaaagagttaagttattttagtt 9729532  T
Q  179 aacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaata 244  Q
    || |||||| |||||||||||||||||||||||||  ||| ||||||||||||||  |||||||||    
T  9729533 aatattaattgtctcaatctcctctcctccattccggtcatcaagatacaaatcaacttccaaata 9729598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 26691948 - 26691825
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatac-aaaaaagaacatatcagtactcaagag 162  Q
    ||||||||||||||||||| ||||||||||||||| ||||||  |||||| ||| ||||||||| ||||| | |||||| |||| |||||||||||| |     
T  26691948 tgttatactatatccaaaa-ggaacattgttagtgttatactctatcgatccaaaaaagaagcactatatccaaaaaaataacacatcagtactcaaaac 26691850  T
Q  163 ttaagctattttagttaacattaat 187  Q
    ||||| |||||||||||||||||||    
T  26691849 ttaagttattttagttaacattaat 26691825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 26961680 - 26961557
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatac-aaaaaagaacatatcagtactcaagag 162  Q
    ||||||||||||||||||| ||||||||||||||| ||||||  |||||| ||| ||||||||| ||||| | |||||| |||| |||||||||||| |     
T  26961680 tgttatactatatccaaaa-ggaacattgttagtgttatactctatcgatccaaaaaagaagcactatatccaaaaaaataacacatcagtactcaaaac 26961582  T
Q  163 ttaagctattttagttaacattaat 187  Q
    ||||| |||||||||||||||||||    
T  26961581 ttaagttattttagttaacattaat 26961557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 30284392 - 30284514
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||||||||||||||| | ||||||||||||| ||||||| |||||| ||| |||  |||| ||||| |||||||||||| |||| |||||| ||    
T  30284392 agtgctatactatatccaaaatg-aacattgttagtgttatactatatcgatccaaaaaa--agcactatattcaaaaaagaacacatcactactcagga 30284488  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||||||||||||||||    
T  30284489 gttaagttattttagttaacattaat 30284514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 18001781 - 18001875
Alignment:
Q  93 ttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    |||||||||||||  |||||| ||| ||||||||| ||||| |||||||||||| |||||||||||| | ||||| |||||||||||||||||||    
T  18001781 ttagtgctatactttatcgatccaaaaaagaagcactatattcaaaaaagaacacatcagtactcaataattaagttattttagttaacattaat 18001875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 10657324 - 10657216
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| ||| |||| ||||||| | || |||||||||||||||  ||||||||||||||||||||||| |||||| ||| |||||||||     
T  10657324 ataccaaaaagagcaccattagtgttatacatcaatgctatactatatccaaac-ggaacattgttagtgctatactatatcgatccaaaaaagaagcat 10657226  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  10657225 tatatccaaa 10657216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 5722287 - 5722186
Alignment:
Q  86 aacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacatta 185  Q
    ||||||||||||| ||| ||| |||||| ||| ||||||||| ||||| || ||||||||| || ||||||||||||||||| | ||||||| |||||||    
T  5722287 aacattgttagtgttatcctatatcgattcaaaaaagaagcactatatccataaaagaacacataagtactcaagagttaagtttttttagtcaacatta 5722188  T
Q  186 at 187  Q
    ||    
T  5722187 at 5722186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 5985717 - 5985801
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgata 114  Q
    |||||||||||||||||||||||| ||||||| | || |||||| ||||| ||||||||||||| ||||||||||||| |||||||    
T  5985717 ataccaaaaagagcatcatcagtgttatacatcaatgctatactttatcc-aaaaggaacattgctagtgctatactatatcgata 5985801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 5612235 - 5612351
Alignment:
Q  72 tatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaa-aagaacatatcagtactcaagagttaagcta 170  Q
    |||||||  ||| |||||||||||||||||||||| ||| ||  || ||||||||| ||||| ||||| ||||||| |||| ||||| ||||||||| ||    
T  5612235 tatatccccaaaagaacattgttagtgctatactatatcaatcaaaaaaagaagcactatatccaaaaaaagaacacatcaatactcgagagttaagtta 5612334  T
Q  171 ttttagttaacattaat 187  Q
    ||||| |||||||||||    
T  5612335 ttttaattaacattaat 5612351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 9793175 - 9793040
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| ||||||| | || || ||||||||| |||| |||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  9793175 ataccaaaaagagcaccatcagtgttatacatcaatgctacactatatcc-aaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcac 9793078  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  9793077 tatatccaaaaaaagaacacatcagtact-aagagttaa 9793040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 39689970 - 39690105
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||  ||||||||| | || || ||||||||| ||||||||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  39689970 ataccaaaaagagcaccatcatagctatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcac 39690067  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  39690068 tatatccaaaaaaagaacacatcagtact-aagagttaa 39690105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 34032666 - 34032571
Alignment:
Q  92 gttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||  |||||| ||| ||| ||||| |||||  ||||||||||| || ||||||||| ||||||  |||||||||||||||||||    
T  34032666 gttagtgctatactttatcgatccaaaaaataagcactatattaaaaaaagaacacattagtactcaaaagttaaattattttagttaacattaat 34032571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 1795704 - 1795635
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| |||||| ||| ||||||||| ||||    
T  1795704 agtgttatactatatccaaaa-gaaacattgttagtgctatactatatcgatccaaaaaagaagcactata 1795635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 1639033 - 1639163
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| | |||||| ||||||| | || || | ||||||||||| | ||| |||||||||||||| || |||||| ||| ||||||||| ||||    
T  1639033 caaaaagagcaccgtcagtgatatacatcaatgctacattatatccaaaatg-aac-ttgttagtgctatattatatcgatccaaaaaagaagcactata 1639130  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | | |||||||||| ||||||||| |||||||||    
T  1639131 tcctaaaaagaacacatcagtact-aagagttaa 1639163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 26716583 - 26716515
Alignment:
Q  63 gtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||||||||||| | ||||||||||||||||||||| |||||| ||| ||||||||| ||||    
T  26716583 gtgttatactatatccaaaatg-aacattgttagtgctatactatatcgatccaaaaaagaagcactata 26716515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 26986323 - 26986255
Alignment:
Q  63 gtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||||||||||| | ||||||||||||||||||||| |||||| ||| ||||||||| ||||    
T  26986323 gtgttatactatatccaaaatg-aacattgttagtgctatactatatcgatccaaaaaagaagcactata 26986255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 41233583 - 41233515
Alignment:
Q  119 aaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    ||||||| | ||||| |||||||||||| || ||||||||| ||||||| |||||||||||||||||||    
T  41233583 aaagaaggactatatccaaaaaagaacacattagtactcaacagttaagttattttagttaacattaat 41233515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 3701397 - 3701319
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaa 141  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||| |||||| ||| ||||||||| | ||| |||||||    
T  3701397 agtgctatactatatccaaaa-ggaacattgttagtgttatactatatcgatccaaaaaagaagcactgtatccaaaaaa 3701319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 43357571 - 43357635
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||||||| | ||||||||||||||||||||| |||||| ||| ||||||||| ||||    
T  43357571 tatactatatccaaaa-gaaacattgttagtgctatactatatcgattcaaaaaagaagcactata 43357635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 1639188 - 1639236
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||| || |||||    
T  1639188 atctcctctcctccattcccatcatcaagatacaaatcagcttgcaaat 1639236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 15066524 - 15066445
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaag 142  Q
    |||| |||||||||||| ||| ||||||||||||||| ||||||| || ||| ||| ||||||||| ||||| ||||||||    
T  15066524 agtgctatactatatccgaaa-ggaacattgttagtgttatactatattgatccaaaaaagaagcattatatccaaaaaag 15066445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 187
Target Start/End: Complemental strand, 7629290 - 7629255
Alignment:
Q  152 gtactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||||||||||||||||||||||||    
T  7629290 gtactcaagagttaagctattttagttaacattaat 7629255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 3934594 - 3934663
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||||||||||| | ||||||||||||| |||| || |||||| ||| ||||||||| ||||    
T  3934594 agtgttatactatatccaaaa-gaaacattgttagtgttatattatatcgatccaaaaaagaagcattata 3934663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 14836643 - 14836574
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||||||| ||||| ||| ||||||||| ||||||| |||||| ||| ||||||||| ||||    
T  14836643 agtgttatactatatcc-aaaagaaactttgttagtgatatactatatcgatccaaaaaagaagcactata 14836574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 21251795 - 21251734
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaa 124  Q
    |||| |||||||||||||||| |||||||||||| |||||||||| |||||| ||| ||||||    
T  21251795 agtgctatactatatccaaaa-ggaacattgttaatgctatactatatcgatccaaaaaagaa 21251734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 25749909 - 25749848
Alignment:
Q  70 actatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||||| | |||||||||||||||||| ||||||||| ||| ||||||||| ||||    
T  25749909 actatatccaaaatg-aacattgttagtgctatattacatcgatccaaaaaagaagcactata 25749848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 33830480 - 33830442
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatca 233  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  33830480 atctcctctcctccattcccatcatcaagatacaaatca 33830442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 7629357 - 7629293
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    |||| |||||||||||||||| |  |||||||||||||||||||| |||||| ||| |||||||||    
T  7629357 agtgctatactatatccaaaa-gatacattgttagtgctatactatatcgatccaaaaaagaagca 7629293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 27938465 - 27938401
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||||||| |||||| ||||||||||| |||| |||||| ||| ||||||||| ||||    
T  27938465 tatactatatccaaaa-ggaacactgttagtgctacactatatcgatccaaaaaagaagcactata 27938401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 12852829 - 12852781
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    ||||||||||||||||| |||||| ||||||||||||||  ||||||||    
T  12852829 atctcctctcctccatttccatcatcaagatacaaatcaacttccaaat 12852781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 26794241 - 26794351
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||||||||||   || |||| | || || | ||||||| ||||||||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  26794241 ataccaaaaagagcatcatcaggaataaacatcaatgctacattatatcc-aaaaggaac-ttgttagtgttatactaaatcgatccaaaaaagaatcac 26794338  T
Q  129 tatatacaaaaaa 141  Q
    ||||| |||||||    
T  26794339 tatatccaaaaaa 26794351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 26794392 - 26794440
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    ||||| |||||||||||||||||| ||||||||||||||  ||||||||    
T  26794392 atctcttctcctccattcccatcatcaagatacaaatcaacttccaaat 26794440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 3934662 - 3934696
Alignment:
Q  153 tactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||| |||||||||||||||||||    
T  3934662 tactcaagagttaagttattttagttaacattaat 3934696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 57
Target Start/End: Complemental strand, 5722330 - 5722302
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctata 57  Q
    |||||||||||||||||||||||||||||    
T  5722330 ataccaaaaagagcatcatcagtgctata 5722302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 9793015 - 9792967
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||| ||||| ||||||||| ||||  ||||||||    
T  9793015 atctcctctcctccattctcatcatcaagatacagatcaacttccaaat 9792967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 11694462 - 11694412
Alignment:
Q  135 caaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    |||||||||||| ||||||||| |||||||||| ||||||| |||||||||||    
T  11694462 caaaaaagaacacatcagtact-aagagttaagttatttta-ttaacattaat 11694412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 39690130 - 39690178
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||| ||||||| ||||| ||||||||||||||  ||||||||    
T  39690130 atctcctctcatccattctcatcatcaagatacaaatcaacttccaaat 39690178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 9283646 - 9283826
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||||||||| ||||||| ||||||||||||| ||||||| ||||||  || ||| ||||| |||||  ||||||||||| || | |||||||||    
T  9283646 agtgatatactatattcaaaaag-aacattgttagtgttatactatatcgatctaaaaaataagcactatatcaaaaaaagaacacataattactcaaga 9283744  T
Q  162 gttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  9283745 gttaaattattttagttaacattaatcgtctcaatctcctctcctccatttccatcaacaagatacaaaccagcttccaaat 9283826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 25969837 - 25969657
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||||||||| ||||||| ||||||||||||| ||||||| ||||||  || ||| ||||| |||||  ||||||||||| || | |||||||||    
T  25969837 agtgatatactatattcaaaaag-aacattgttagtgttatactatatcgatctaaaaaataagcactatatcaaaaaaagaacacataattactcaaga 25969739  T
Q  162 gttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  25969738 gttaaattattttagttaacattaatcgtctcaatctcctctcctccatttccatcaacaagatacaaaccagcttccaaat 25969657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 9250096 - 9250275
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||||||||| ||||||| ||||||||||||| ||||||| ||||||  || ||| ||||| |||||  |||||||| || || | |||||||||    
T  9250096 agtgatatactatattcaaaaag-aacattgttagtgttatactatatcgatctaaaaaataagcactatatcaaaaaaaga-cacataattactcaaga 9250193  T
Q  162 gttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  9250194 gttaaattattttagttaacattaatcgtctcaatctcctctcctccatttccatcaacaagatacaaaccagcttccaaat 9250275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 47719952 - 47720053
Alignment:
Q  142 gaacatatcagtactcaagagttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaa 241  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  47719952 gaacacatcagtactcaagagttaagttattttagttaacattaatcgtctcaatctcctctcctccatttccatcaacaagatacaaaccagcttccaa 47720051  T
Q  242 at 243  Q
    ||    
T  47720052 at 47720053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 129 - 243
Target Start/End: Complemental strand, 11058712 - 11058598
Alignment:
Q  129 tatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagataca 228  Q
    ||||| |||||||||||| |||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||    
T  11058712 tatatccaaaaaagaacacatcagtacacaagagttaagttattttagttaacattaattgtctcaatcttctctccttcattcccatcatcaagataca 11058613  T
Q  229 aatcagtttccaaat 243  Q
    |||||| ||||||||    
T  11058612 aatcagcttccaaat 11058598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 23078894 - 23079018
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| |||||| ||| ||||||||| ||||| |||||||||||| ||||||||| ||||    
T  23078894 agtgctatactatatc-aaaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaaaaaagaacacatcagtacttaaga 23078992  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| ||||||| |||||||||||    
T  23078993 gttaagttattttaattaacattaat 23079018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 15878209 - 15878333
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||| ||||||  || |||||| || |||||  ||||||||||| |||| |||||||||    
T  15878209 agtgttatactatatccaaaatg-aacattgttagtgttatactatatcgatctaaaaaagaaacactatattaaaaaaagaacacatcaatactcaaga 15878307  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||||||||| ||||||    
T  15878308 gttaagttattttagttaatattaat 15878333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 36757797 - 36757925
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgtta----gtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactc 157  Q
    |||| |||||||||||||||| ||||||||||||    ||| ||||||| |||||| ||| ||| ||||| |||||||||||||  ||| ||||||||||    
T  36757797 agtgctatactatatccaaaa-ggaacattgttaatcagtgttatactatatcgatccaaaaaataagcactatatacaaaaaatgacacatcagtactc 36757895  T
Q  158 aagagttaagctattttagttaacattaat 187  Q
    |||||||||| |||||||||||||||||||    
T  36757896 aagagttaagttattttagttaacattaat 36757925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 36767321 - 36767449
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgtta----gtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactc 157  Q
    |||| |||||||||||||||| ||||||||||||    ||| ||||||| |||||| ||| ||| ||||| |||||||||||||  ||| ||||||||||    
T  36767321 agtgctatactatatccaaaa-ggaacattgttaatcagtgttatactatatcgatccaaaaaataagcactatatacaaaaaatgacacatcagtactc 36767419  T
Q  158 aagagttaagctattttagttaacattaat 187  Q
    |||||||||| |||||||||||||||||||    
T  36767420 aagagttaagttattttagttaacattaat 36767449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 1400055 - 1400177
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagt 163  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| ||||||  || |||||| || ||||| ||||||| |||| |||| |||| ||||||    
T  1400055 tgttatactatatccaaaa-ggaacattgttagtgttatactatatcgatctaaaaaagaaacactatattcaaaaaataacacatcaatacttaagagt 1400153  T
Q  164 taagctattttagttaacattaat 187  Q
    |||| ||||||| |||||||||||    
T  1400154 taagttattttaattaacattaat 1400177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 11830562 - 11830432
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| |||||||||||||||| | || || | ||||||||||| ||||| ||||||||||||||||| |||||| ||| ||||||||| ||||    
T  11830562 caaaaagagcaccatcagtgctatacatcaatgctacattatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaagcattata 11830465  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | ||||||||||||  |||||||| |||||||||    
T  11830464 tccaaaaaagaacacgtcagtact-aagagttaa 11830432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 33454400 - 33454276
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||| ||||||||||| | ||||||||||||| ||||||| |||||| ||| ||||||||| ||||| || ||||||||| || |||||||||||    
T  33454400 agtgctatattatatccaaaatg-aacattgttagtgttatactatatcgatccaaaaaagaagcactatatccataaaagaacacataagtactcaaga 33454302  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| | ||||||| |||||||||    
T  33454301 gttaagtttttttagtcaacattaat 33454276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 36661342 - 36661208
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||||||||||| | || || ||||||||| ||||||||| ||||||||| ||||||  |||||| ||| |||||||||     
T  36661342 ataccaaaaagagcaccatcagtgctatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgttatactttatcgatccaaaaaagaagcac 36661245  T
Q  129 tatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | ||| |||||||||||| ||||||||| |||||||||    
T  36661244 tgtatccaaaaaagaacacatcagtact-aagagttaa 36661208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 47237991 - 47238116
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| || ||||||||||||| | || || |||| |||||||| ||| |||||||| |||||||||| |||||| ||| |||||||||     
T  47237991 ataccaaaaagagcaccaccagtgctatacatcaatgcta-actacatccaaaaggga-cattgttaatgctatactatatcgattcaaaaaagaagcac 47238088  T
Q  129 tatatacaaaaaagaacatatcagtact 156  Q
    ||||| |||||||||||| |||||||||    
T  47238089 tatatccaaaaaagaacacatcagtact 47238116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 1042820 - 1042928
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| ||||||| | || |||| ||||||||||| ||||||||||||||| ||||||| |||||| ||| |||||||||     
T  1042820 ataccaaaaagagcaccatcagtgttatacatcaatgctatattatatccaaaa-ggaacattgttagtgttatactatatcgatccaaaaaagaagcac 1042918  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  1042919 tatatccaaa 1042928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 26773333 - 26773441
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| ||| |||| ||||||| | || |||||||||||||||  ||||||||||||||||||||||| |||||| ||| |||||||||     
T  26773333 ataccaaaaagagcaccattagtgttatacatcaatgctatactatatccaaac-ggaacattgttagtgctatactatatcgatccaaaaaagaagcat 26773431  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  26773432 tatatccaaa 26773441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 35160196 - 35160070
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgtta----gtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactc 157  Q
    |||| |||||||||||||||| ||||||||||||    ||||||||||| |||||| ||| ||||||||| ||| ||  |||||||||| ||||||||||    
T  35160196 agtgctatactatatccaaaa-ggaacattgttaattagtgctatactatatcgatccaaaaaagaagcactatcta--aaaaagaacacatcagtactc 35160100  T
Q  158 aagagttaagctattttagttaacattaat 187  Q
    |||||||||  ||||||| |||||||||||    
T  35160099 aagagttaaattattttaattaacattaat 35160070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 36763576 - 36763705
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgtta----gtgctatactacatcgatacaataaagaagcaatatatacaaaaaa-gaacatatcagtact 156  Q
    |||| |||||||||||||||| ||||||||||||    ||| ||||||| |||||| ||| ||||| ||| ||||| ||||||| | ||| |||||||||    
T  36763576 agtgctatactatatccaaaa-ggaacattgttaattagtgttatactatatcgatccaaaaaagaggcactatatccaaaaaaaggacacatcagtact 36763674  T
Q  157 caagagttaagctattttagttaacattaat 187  Q
    ||||||||||| |||||||||||||||||||    
T  36763675 caagagttaagttattttagttaacattaat 36763705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 48163806 - 48163671
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| || ||||| ||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| |||||| ||     
T  48163806 ataccaaaaagagcaccagcagtgttatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaatcac 48163709  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  48163708 tatatccaaaaaaagaacacatcagtact-aagagttaa 48163671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 27555086 - 27555221
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| || ||||| ||||||| | || || ||||||||| ||||||||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  27555086 ataccaaaaagagcaccagcagtgttatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcac 27555183  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  27555184 tatatccaaaaaaagaacacatcagtact-aagagttaa 27555221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 8029175 - 8029067
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| ||||||| | || |||||||||| | ||||| |||||||||||||||||| || |||||| ||| ||||||| |     
T  8029175 ataccaaaaagagcaccatcagtgttatacatcaatgctatactatat-ctaaaagaaacattgttagtgctatagtatatcgattcaaaaaagaagtac 8029077  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  8029076 tatatccaaa 8029067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 21180121 - 21180044
Alignment:
Q  108 atcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacatta 185  Q
    |||||| ||| ||| ||||| ||||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  21180121 atcgatccaaaaaataagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttatcatta 21180044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 27397362 - 27397491
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| |||||||||||||||| | || || ||||||| ||||| ||||| |||||||||||||| || |||||| ||| ||||||||| ||||    
T  27397362 caaaaagagcaccatcagtgctatacatcaatgctacactatattcaaaa-ggaac-ttgttagtgctataatatatcgatccaaaaaagaagcattata 27397459  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | ||||||| || | ||||||||| |||||||||    
T  27397460 tccaaaaaa-aaaacatcagtact-aagagttaa 27397491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 44959992 - 44960044
Alignment:
Q  135 caaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  44959992 caaaaaagaacacatcagtactcaagagttaagttattttagttaacattaat 44960044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 19820787 - 19820861
Alignment:
Q  66 ttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaa 141  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| | | ||||||||| ||||| |||||||    
T  19820787 ttatactatatccaaaa-ggaacattgttagtgctatactatatcgattcgaaaaagaagcactatatccaaaaaa 19820861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 16563995 - 16564101
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| ||||  | | |  |||||||||||||||| |||||||||||| |||||||||| |||||| ||| |||||||||     
T  16563995 ataccaaaaagagcaccatcagtgttata--tcaatactatactatatccaaaa-ggaacattgttaatgctatactatatcgatccaaaaaagaagcac 16564091  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  16564092 tatatccaaa 16564101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 16601667 - 16601561
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||||| ||||  | | |  |||||||||||||||| |||||||||||| |||||||||| |||||| ||| |||||||||     
T  16601667 ataccaaaaagagcaccatcagtgttata--tcaatactatactatatccaaaa-ggaacattgttaatgctatactatatcgatccaaaaaagaagcac 16601571  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  16601570 tatatccaaa 16601561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 23969933 - 23970002
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| |||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||||||| ||||    
T  23969933 agtgctatactatatccaaaa-ggaacattgttagtgctatactatatcgatccaaaaaagaagcactata 23970002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 27354315 - 27354184
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| || ||||| ||||||| | || || ||||||||||||| ||||| |||||||||||||| || |||||| ||| |||||| || ||||    
T  27354315 caaaaagagcaccagcagtgttatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatattatatcgatccaaaaaagaatcactata 27354218  T
Q  133 tac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    | | ||||||||||| ||||||||| |||||||||    
T  27354217 tccaaaaaaagaacacatcagtact-aagagttaa 27354184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 48153853 - 48153784
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| |||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||||||| ||||    
T  48153853 agtgctatactatatccaaaa-ggaacattgttagtgctatactatatcgatccaaaaaagaagcactata 48153784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 40041652 - 40041584
Alignment:
Q  119 aaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||| |||||  ||||||||||| |||||||||||| ||||||  |||||||||||||||||||    
T  40041652 aaagaagcattatatctaaaaaagaacacatcagtactcaatagttaaattattttagttaacattaat 40041584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 4292034 - 4291940
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    |||||||||||||||||||||||| |||  || | || |||||||||||| |||||||||||||||| || ||||||| |||||| ||| |||||||||    
T  4292034 ataccaaaaagagcatcatcagtgttat--atcaatgctatactatatcc-aaaaggaacattgttaatgttatactatatcgatccaa-aaagaagca 4291940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 16851181 - 16851046
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| || ||||  ||||||| | || || |||||||||||||  |||  ||||||||| ||||||| |||||| ||| |||||| ||     
T  16851181 ataccaaaaagagcaccagcagtattatacatcaatgctacactatatccaaaa--gaaacttgttagtgatatactatatcgatccaaaaaagaatcac 16851084  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  16851083 tatatccaaaaaaagaacacatcagtact-aagagttaa 16851046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 44270048 - 44269986
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| ||||||| || |||||||||    
T  44270048 tgttatactatatccaaaa-ggaacattgttagtgttatactatatcgataaaaaaaagaagca 44269986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 26973365 - 26973296
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||| |||||||||||||| | ||||||||||||||||||||| |||||| ||| ||||||||| ||||    
T  26973365 agtgttgtactatatccaaaa-gaaacattgttagtgctatactatatcgatccaaaaaagaagcactata 26973296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 36413676 - 36413609
Alignment:
Q  63 gtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| |||||| ||| ||||||||| ||||    
T  36413676 gtgttatactatatccaaaa-ggaacattgttagtgttatactatatcgat-caaaaaagaagcactata 36413609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 11830407 - 11830359
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||| || |||||    
T  11830407 atctcctctcctccattcccatcatcaagatacaaatcagctttcaaat 11830359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 36661183 - 36661135
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  36661183 atctcctctcctgcattcccatcatcaagatacaaatcagcttccaaat 36661135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 178
Target Start/End: Complemental strand, 38065001 - 38064881
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatac-aataaagaagcaatatat----acaaaaaagaacatatcagtact 156  Q
    |||| |||||||||||||||| ||||||||||||||| |||| || |||||| | || ||||||||| |||||    ||| |||| |||| || ||||||    
T  38065001 agtgctatactatatccaaaa-ggaacattgttagtgttatattatatcgatccaaaaaaagaagcactatatccacacacaaaaaaacacattagtact 38064903  T
Q  157 caagagttaagctattttagtt 178  Q
    ||| ||||||| ||||||||||    
T  38064902 caaaagttaagttattttagtt 38064881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 19510965 - 19510883
Alignment:
Q  55 atacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaa 138  Q
    |||||| | ||||||||||||||||||| ||||||||| ||||| |||| || |||||| ||| ||||||||| ||||| ||||    
T  19510965 atacatcaatgttatactatatccaaaa-ggaacattgctagtgttatattatatcgatccaagaaagaagcactatatccaaa 19510883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 21409703 - 21409629
Alignment:
Q  57 acatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| |||| |||||||||||||||| | || |||||||||||||||||| |||||| ||| ||||||||| ||||    
T  21409703 acataagtgctatactatatccaaaa-gaaatattgttagtgctatactatatcgatccaaaaaagaagcattata 21409629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 47238441 - 47238488
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaa 242  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  47238441 atctcctctcccccattcccatcatcaagatacaaatcagcttccaaa 47238488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 166
Target Start/End: Complemental strand, 40096528 - 40096401
Alignment:
Q  37 aagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatac- 135  Q
    ||||||| |||||||| ||||||| | || || ||||||||| |||| |||| ||||||||| ||||||| |||||| ||| ||| || || ||||| |     
T  40096528 aagagcaccatcagtgttatacatcaatgctacactatatcc-aaaatgaac-ttgttagtgatatactatatcgatccaaaaaaaaatcactatatcca 40096431  T
Q  136 aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||||||||| ||||||||| |||||||||    
T  40096430 aaaaaagaacacatcagtact-aagagttaa 40096401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 27397516 - 27397552
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaat 231  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27397516 atctcctctcctccattcccatcatcaagatacaaat 27397552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 40096376 - 40096328
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  40096376 atctcctctcctccattcccatcatcaagatacagatcaacttccaaat 40096328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 44959119 - 44959165
Alignment:
Q  59 atgagtgttatactatatccaaaaaggaacattgttagtgctatacta 106  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||||    
T  44959119 atgagtgttgtactatatccaaaa-ggaacattgctagtgctatacta 44959165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 21409630 - 21409596
Alignment:
Q  153 tactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||| |||||||||||||||||||    
T  21409630 tactcaagagttaagttattttagttaacattaat 21409596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 24956491 - 24956457
Alignment:
Q  153 tactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||| |||||||||||||||||||    
T  24956491 tactcaagagttaagttattttagttaacattaat 24956457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 57
Target Start/End: Complemental strand, 33454420 - 33454392
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctata 57  Q
    |||||||||||||||||||||||||||||    
T  33454420 ataccaaaaagagcatcatcagtgctata 33454392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 9e-48; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 67 - 243
Target Start/End: Original strand, 45158966 - 45159141
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||||  || ||||||||| |||||  ||||||||||| || |||||| ||||||| |    
T  45158966 tatactatatccaaaaag-aacatttttagtgctatactatatcgatctaaaaaagaagcactatatcgaaaaaagaacacataagtactgaagagttga 45159064  T
Q  167 gctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
      ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||  ||||||||    
T  45159065 attattttagttaacattaatcgtctcaatctcctctcctccatttccatcaacaagatacaaaccaacttccaaat 45159141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 31235976 - 31236092
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||  || ||||||||| ||||| ||||||| |||| ||||||||| |||||||||    
T  31235976 tatactatatccaaaa-ggaacattgttagtgttatactatatcgatctaaaaaagaagcactatatccaaaaaaaaacacatcagtactgaagagttaa 31236074  T
Q  167 gctattttagttaacatt 184  Q
    | ||||||||||||||||    
T  31236075 gttattttagttaacatt 31236092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 34146511 - 34146389
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagt 163  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||| ||  || ||| ||||| ||||| |||||||||||| |||| |||||||||||    
T  34146511 tgttatactatatccaaaa-ggaacactgttagtgctatactatatcaatctaaaaaataagcattatatccaaaaaagaacaaatcaatactcaagagt 34146413  T
Q  164 taagctattttagttaacattaat 187  Q
    |||  |||||||||||||||||||    
T  34146412 taaattattttagttaacattaat 34146389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 3545366 - 3545489
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||||||||||||||| | || ||| |||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||| ||||||||||||||    
T  3545366 agtggtatactatatccaaaa-gaaatattattagtgctatactatatcgataaaataaa-aagcactatatccaaaaaagaacacatcagtactcaaga 3545463  T
Q  162 gttaagctattttagttaacattaat 187  Q
     ||||| ||||||| |||||||||||    
T  3545464 attaagttattttaattaacattaat 3545489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 35342650 - 35342527
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||  || |||||| || |||||  ||||||||||| ||||||| ||||||    
T  35342650 agtgttatattatatccaaaa-ggaacattgttagtgttatactatatcgatctaaaaaagaaacactatatt-aaaaaagaacacatcagtaatcaaga 35342553  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||||||||||||||||    
T  35342552 gttaagttattttagttaacattaat 35342527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 2319603 - 2319484
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||| || ||| ||||||||| ||||| || |||| ||   |||||||||||| ||||||    
T  2319603 tatactatatccaaaa-ggaacattgttagtgttatactatatcaatccaaaaaagaagcactatatccataaaaaaatgcatcagtactcaatagttaa 2319505  T
Q  167 gctattttagttaacattaat 187  Q
    | |||||||||||||||||||    
T  2319504 gttattttagttaacattaat 2319484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 243
Target Start/End: Original strand, 6496916 - 6497119
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||  ||||||| ||||||| | || || ||||||||||||| ||||| |||||||| |||||||| |||||| ||| ||||||||| ||||    
T  6496916 caaaaagagcactatcagtgttatacatcaatgctacactatatccaaaa-ggaac-ttgttagtcctatactatatcgatccaaaaaagaagcactata 6497013  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaatc 232  Q
    | |||||||||||| ||||||||| ||||||||| |  |   |  ||||  ||| ||| |  |||||||||||||||||||||||| |||||||||||||    
T  6497014 tccaaaaaagaacacatcagtact-aagagttaa-cactaacaagtaac--taa-cgtttacatctcctctcctccattcccatcatcaagatacaaatc 6497108  T
Q  233 agtttccaaat 243  Q
    || ||||||||    
T  6497109 agcttccaaat 6497119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 21104799 - 21104691
Alignment:
Q  80 aaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaa-gaacatatcagtactcaagagttaagctattttagtt 178  Q
    |||||||| |||||||||| ||||||| |||||||||| || |||||| ||||| ||||||| | ||| |||| ||||||| ||||||| ||||||||||    
T  21104799 aaaaggaatattgttagtgatatactatatcgatacaaaaatgaagcactatattcaaaaaaagtacacatcaatactcaaaagttaagttattttagtt 21104700  T
Q  179 aacattaat 187  Q
    |||||||||    
T  21104699 aacattaat 21104691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 40308077 - 40308212
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||| ||||||||||||||| || ||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| |||||| ||     
T  40308077 ataccgaaaagagcatcatcaatgttatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaatcac 40308174  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  40308175 tatatccaaaaaaagaacacatcagtact-aagagttaa 40308212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 243
Target Start/End: Original strand, 4169765 - 4169969
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| |||||||||||||||  | || || ||||||| ||||||||||| ||||||||| ||||||| |||||| ||| || |||||| ||||    
T  4169765 caaaaagagcaccatcagtgctatacaccaatgctaaactatat-caaaaaggaac-ttgttagtgttatactatatcgatccaaaaatgaagcattata 4169862  T
Q  133 tac-aaaaaagaacatatcagtactcaagagttaagctattttagttaacattaatcgtctcaatctcctctcctccattcccatcaacaagatacaaat 231  Q
    | | ||||||||||| ||||||||| ||||||||| |  |   |  ||||  ||| | | |||||||||||||||||||| |||||| ||||||||||||    
T  4169863 tccaaaaaaagaacacatcagtact-aagagttaa-cactaacaagtaac--taa-catttcaatctcctctcctccatttccatcatcaagatacaaat 4169957  T
Q  232 cagtttccaaat 243  Q
    ||| ||||||||    
T  4169958 cagcttccaaat 4169969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 20537201 - 20537122
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgat 113  Q
    |||||||||||  ||||||| ||||||| | ||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  20537201 caaaaagagcacaatcagtgttatacatcaatgttatactatatccaaaa-ggaacattgttagtgctatactatatcgat 20537122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 10573798 - 10573703
Alignment:
Q  92 gttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    ||||||| ||||||  |||||| ||| ||| ||||| ||||| |||||||||||| |||| ||||||| ||||||| |||||| ||||||||||||    
T  10573798 gttagtgttatactttatcgatccaaaaaataagcactatatccaaaaaagaacacatcactactcaatagttaagttattttggttaacattaat 10573703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 14824450 - 14824381
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||||| ||||    
T  14824450 agtgctatactatatccaaaaag-aacattgttagtgctatactatatcgatccaaaaaagaagcattata 14824381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 22485146 - 22485011
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||  | || |||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| |||||| ||     
T  22485146 ataccaaaaagagcaacatcaaagataaacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaatcac 22485049  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  22485048 tatatccaaaaaaagaacacatcagtact-aagagttaa 22485011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 24585847 - 24585785
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaa 124  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||    
T  24585847 agtgctatactatatccaaaaagaaacattgttagtgctatactatatcgatccaaaaaagaa 24585785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 5371391 - 5371333
Alignment:
Q  80 aaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaa 138  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||||||| ||||| ||||    
T  5371391 aaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaaa 5371333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 12819679 - 12819573
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| || ||||| |||  || | || |||||||||||| |||||||| ||||||| |||||||||| |||||| ||| |||||||||     
T  12819679 ataccaaaaagagcaccaccagtgttat--atcaatgctatactatatcc-aaaaggaatattgttaatgctatactatatcgatccaaaaaagaagcac 12819583  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  12819582 tatatccaaa 12819573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 6124884 - 6124836
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  6124884 atctcctctcctccattcccatcatcaagatacaaatcaacttccaaat 6124836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 6125050 - 6124940
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||| ||||||||||| | || || |||||||  ||||| |||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  6125050 ataccaaaaagagcaccatcggtgctatacatcaatgctacactatatataaaaa-gaac-ttgttagtgttatactatatcgatccaaaaaagaatcac 6124953  T
Q  129 tatatacaaaaaa 141  Q
    ||||| |||||||    
T  6124952 tatatccaaaaaa 6124940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 22484986 - 22484938
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  22484986 atctcctctcctccattcccatcatcaagatacaaatcaacttccaaat 22484938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 40308237 - 40308285
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  40308237 atctcctctcctccattcccatcatcaagatacaaatcaacttccaaat 40308285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 40431830 - 40431880
Alignment:
Q  63 gtgttatactatatccaaaaaggaacattgttagtgctatactacatcgata 114  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  40431830 gtgttatactatatccaaaa-ggaacattgttagtgttatactatatcgata 40431880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 7807096 - 7807231
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| || || || ||||||| | || || ||||||| | ||||||||  ||||||||| ||||||| |||||| ||| |||||| ||     
T  7807096 ataccaaaaagagcaccagcaatgttatacatcaatgctacactatattc-aaaaggaa-tttgttagtgttatactatatcgatccaaaaaagaatcac 7807193  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  7807194 tatatccaaaaaaagaacacatcagtact-aagagttaa 7807231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 4355623 - 4355559
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    |||| |||||||||||||||| | ||||||||||||| ||||||| |||||| ||| |||||||||    
T  4355623 agtgctatactatatccaaaa-gaaacattgttagtgttatactatatcgatccaaaaaagaagca 4355559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 4562095 - 4562031
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||| || ||| ||||||||| ||||    
T  4562095 tatactatatccaaaa-ggaacattgttagtgatatactatatcaatccaaaaaagaagcactata 4562031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 9293366 - 9293314
Alignment:
Q  135 caaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    |||||||||||| ||| |||||||| |||| || |||||||||||||||||||    
T  9293366 caaaaaagaacacatcggtactcaatagttgagttattttagttaacattaat 9293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 18301435 - 18301364
Alignment:
Q  55 atacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    |||||| | ||||||| ||||||||||| ||||||||| |||||||||| || |||||| ||| |||||||||    
T  18301435 atacatcaatgttatattatatccaaaa-ggaacattgctagtgctatattatatcgatccaaaaaagaagca 18301364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 9293693 - 9293655
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctata 103  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  9293693 tgttatactatatccaaaaa-gaacattgttagtgctata 9293655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 1005823 - 1005762
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaa 124  Q
    |||| |||||||||||| |||||||| |||||||||| ||||||| |||||| ||| ||||||    
T  1005823 agtgctatactatatcc-aaaaggaatattgttagtgttatactatatcgatccaaaaaagaa 1005762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 44156841 - 44156807
Alignment:
Q  153 tactcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||||| |||||||||||||||||||    
T  44156841 tactcaagagttaagttattttagttaacattaat 44156807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 44156909 - 44156840
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||||||||| || | |||||||||||| ||||| || |||||| ||| ||||||||| ||||    
T  44156909 agtgttatactatatccagaa-gaaacattgttagttctatattatatcgatccaaaaaagaagcattata 44156840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 8482729 - 8482793
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||||||| |||||||||||| || |||| || |||||| ||| ||||||||| ||||    
T  8482729 tatactatatccaaaa-ggaacattgttaatgttatattatatcgatccaaaaaagaagcattata 8482793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 4355553 - 4355521
Alignment:
Q  155 ctcaagagttaagctattttagttaacattaat 187  Q
    ||||||||||||| |||||||||||||||||||    
T  4355553 ctcaagagttaagttattttagttaacattaat 4355521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 36551717 - 36551593
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||  || |||||| || ||||| |||||||||||| |||| |||||||||    
T  36551717 agtgttatattatatccaaaa-ggaacattgttagtgttatactatatcgatctaaaaaagaaacactatattcaaaaaagaacacatcactactcaaga 36551619  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||||||||||||||||    
T  36551618 gttaagttattttagttaacattaat 36551593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 24851798 - 24851679
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||||||||| | ||||||||||||||||||||| |||||| ||| |||||| || |||||  ||||||||||| |||| ||||||||||||||    
T  24851798 tatactatatccaaaacg-aacattgttagtgctatactatatcgatccaaaaaagaatcactatatcaaaaaaagaacacatcattactcaagagttaa 24851700  T
Q  167 gctattttagttaacattaat 187  Q
    | |||||||||||||||||||    
T  24851699 gttattttagttaacattaat 24851679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 25257479 - 25257349
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| |||||||||||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| ||||||||| ||||    
T  25257479 caaaaagagcaccatcagtgctatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactata 25257382  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | |||||||||||| ||||||||| |||||||||    
T  25257381 tccaaaaaagaacacatcagtact-aagagttaa 25257349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 187
Target Start/End: Original strand, 24589913 - 24590033
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaa-catatcagtactcaagagtta 165  Q
    |||| ||||| ||||||| ||||||||||||| ||||||| |||||| ||| |||||| || ||||| |||||||||| || ||||||||||||||||||    
T  24589913 tatattatattcaaaaag-aacattgttagtgttatactatatcgatccaaaaaagaaacactatattcaaaaaagaagcacatcagtactcaagagtta 24590011  T
Q  166 agctattttagttaacattaat 187  Q
    || |||||||||||||||||||    
T  24590012 agttattttagttaacattaat 24590033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 5985049 - 5984919
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| |||||||| ||||||| | || || ||||||||||||| ||||| |||| |||||||||||| |||||| ||| ||||||||| ||||    
T  5985049 caaaaagagcaccatcagtgttatacatcaatgctacactatatccaaaa-ggaac-ttgtcagtgctatactatatcgatccaaaaaagaagcactata 5984952  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | |||||||||||| ||||||||| |||||||||    
T  5984951 tccaaaaaagaacacatcagtact-aagagttaa 5984919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 47654997 - 47654873
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    |||| |||| ||||||||||| | ||||||||||||| ||||||| |||||| ||| ||||||||| ||||| |  ||||||||| ||||||||||||||    
T  47654997 agtgctatattatatccaaaatg-aacattgttagtgttatactatatcgatccaaaaaagaagcactatatccgtaaaagaacacatcagtactcaaga 47654899  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| | ||||||| |||||||||    
T  47654898 gttaagtttttttagtcaacattaat 47654873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 36367419 - 36367554
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| || ||||| ||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| |||||| ||     
T  36367419 ataccaaaaagagcaccagcagtgttatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaatcac 36367516  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  36367517 tatatccaaaaaaagaacacatcagtact-aagagttaa 36367554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 32380865 - 32380989
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatac-aaaaaagaacatatcagtactcaag 160  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||| ||  || ||| ||||||||| ||||| | |||||| || | |||||| ||| ||    
T  32380865 agtgttatactatattcaaaa-ggaacattgttagtgttatactatatttattcaaaaaagaagcattatatccaaaaaaaaaaaacatcagtgctctag 32380963  T
Q  161 agttaagctattttagttaacattaa 186  Q
    ||||||| ||||||||||||||||||    
T  32380964 agttaagttattttagttaacattaa 32380989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 43190123 - 43190015
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    |||| ||||||||||  | ||||| ||||||| | || |||||||||||||||| ||||||||||||||||||||||| |||||| ||| |||||||||     
T  43190123 atacaaaaaagagcacgagcagtgttatacatcaatgctatactatatccaaaa-ggaacattgttagtgctatactatatcgatccaaaaaagaagcac 43190025  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  43190024 tatatccaaa 43190015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 28658661 - 28658768
Alignment:
Q  46 atcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaac 145  Q
    ||||||||||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| ||||||||| |||||  ||||||||||    
T  28658661 atcagtgctatacatca-tgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactatatcaaaaaaagaac 28658757  T
Q  146 atatcagtact 156  Q
    | |||||||||    
T  28658758 acatcagtact 28658768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 28948448 - 28948583
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||||  ||||||||| | || || ||||||||| ||||||||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  28948448 ataccaaaaagagcaccatcatagctatacatcaatgctacactatatcc-aaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcac 28948545  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  28948546 tatatccaaaaaaagaacacatcagtact-aagagttaa 28948583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 3708100 - 3708185
Alignment:
Q  92 gttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagt 177  Q
    ||||||||||||||  |||||| ||| ||||||||| |||||  ||||||||||| ||| |||||||||||||||| |||||||||    
T  3708100 gttagtgctatactttatcgatccaaaaaagaagcattatatctaaaaaagaacacatcggtactcaagagttaagttattttagt 3708185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 30324582 - 30324452
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||| ||  ||||||| ||| ||| | || || ||||||||||||| ||||  ||||||||||||||||| |||||| ||| ||||||||| ||||    
T  30324582 caaaaagatcactatcagtgttatgcatcaatgctacactatatccaaaa-ggaat-ttgttagtgctatactatatcgatccaaaaaagaagcactata 30324485  T
Q  133 tacaaaaaagaacatatcagtactcaagagttaa 166  Q
    | |||||||||||| ||||||||| |||||||||    
T  30324484 tccaaaaaagaacacatcagtact-aagagttaa 30324452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 2472736 - 2472832
Alignment:
Q  91 tgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    |||||||||||||||  ||||||   | ||||||||| ||||| ||||||| |||| ||  |||||||||||||||| |||||||||||||||||||    
T  2472736 tgttagtgctatactttatcgatcagaaaaagaagcactatatccaaaaaataacacattcgtactcaagagttaagttattttagttaacattaat 2472832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 33039871 - 33039819
Alignment:
Q  135 caaaaaagaacatatcagtactcaagagttaagctattttagttaacattaat 187  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  33039871 caaaaaagaacacatcagtactcaagagttaagttattttagttaacattaat 33039819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 36363295 - 36363405
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| || ||||| ||||||| | || || ||||||||||||| ||||| ||||||||||||||||| |||||| ||| |||||| ||     
T  36363295 ataccaaaaagagcaccagcagtgttatacatcaatgctacactatatccaaaa-ggaac-ttgttagtgctatactatatcgatccaaaaaagaatcac 36363392  T
Q  129 tatatacaaaaaa 141  Q
    ||||| |||||||    
T  36363393 tatatccaaaaaa 36363405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 14334635 - 14334540
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    ||||||||||||||| |||||||| ||||  | | || |||||||||||||||| | ||||||||||||||||||||| |||||| ||| |||||||||    
T  14334635 ataccaaaaagagcaccatcagtgttata--tcaatgctatactatatccaaaa-gaaacattgttagtgctatactatatcgatccaaaaaagaagca 14334540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 37104517 - 37104382
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    |||||||||| |||| || ||||| ||||||| | || || |||||||||||||  |||  ||||||||||||||||| |||||| ||| |||||| ||     
T  37104517 ataccaaaaatagcaccaacagtgttatacatcaatgctacactatatccaaaa--gaaacttgttagtgctatactatatcgatccaaaaaagaatcac 37104420  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  37104419 tatatccaaaaaaagaacacatcagtact-aagagttaa 37104382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 41675777 - 41675899
Alignment:
Q  64 tgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagt 163  Q
    |||||||||||||| |||| | |||||||||| || ||||||| ||||||   |||    | || ||||| |||||||||||| ||||||||||||||||    
T  41675777 tgttatactatatctaaaa-gcaacattgttaatgttatactatatcgatcatatagtataacattatattcaaaaaagaacacatcagtactcaagagt 41675875  T
Q  164 taagctattttagttaacattaat 187  Q
    |||| ||||||| |||||||||||    
T  41675876 taagttattttaattaacattaat 41675899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 6916111 - 6916238
Alignment:
Q  37 aagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatac- 135  Q
    ||||||| |||||||| ||||||| | || || ||||||||| |||| |||| ||||||||| ||||||| |||||| ||| |||||| || ||||| |     
T  6916111 aagagcaccatcagtgttatacatcaatgctacactatatcc-aaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactatatcca 6916208  T
Q  136 aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||||||||| ||||||||| |||||||||    
T  6916209 aaaaaagaacacatcagtact-aagagttaa 6916238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 8133049 - 8132914
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| ||||| || ||||||| | || || ||||||||| |||| |||| ||||||||| ||| ||| |||||| ||| |||||| ||     
T  8133049 ataccaaaaagagcaccatcactgttatacatcaatgctacactatatcc-aaaatgaac-ttgttagtgatattctatatcgatccaaaaaagaatcac 8132952  T
Q  129 tatatac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||| | ||||||||||| ||||||||| |||||||||    
T  8132951 tatattcaaaaaaagaacacatcagtact-aagagttaa 8132914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 31653056 - 31653162
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| ||| |||| |||  || | || |||||||||||| |||||||| ||||||| |||||||||| |||||| ||| |||||||||     
T  31653056 ataccaaaaagagcaccataagtgttat--atcaatgctatactatatcc-aaaaggaaaattgttaatgctatactatatcgatccaaaaaagaagcac 31653152  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  31653153 tatatccaaa 31653162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 38218714 - 38218592
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    ||||||||| ||||||||||| | ||||||||||||| |||| || ||||||  || ||| |  || |||||  ||||||||||| |||| |||||||||    
T  38218714 agtgttatattatatccaaaa-gtaacattgttagtgttatattatatcgatctaaaaaaaa--cactatattaaaaaaagaacacatcaatactcaaga 38218618  T
Q  162 gttaagctattttagttaacattaat 187  Q
    |||||| |||||||| ||| ||||||    
T  38218617 gttaagttattttagctaatattaat 38218592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 166
Target Start/End: Complemental strand, 38331308 - 38331181
Alignment:
Q  37 aagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatac- 135  Q
    ||||||| |||||||| ||||||| | || || ||||||||| |||| |||| ||||||||| ||||||| |||||| ||| |||||| || ||||| |     
T  38331308 aagagcaccatcagtgttatacatcaatgctacactatatcc-aaaatgaac-ttgttagtgatatactatatcgatccaaaaaagaatcactatatcca 38331211  T
Q  136 aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||||||||| ||||||||| |||||||||    
T  38331210 aaaaaagaacacatcagtact-aagagttaa 38331181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 3427557 - 3427509
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  3427557 atctcctctcctccattcccatcatcaagatacaaatcaacttccaaat 3427509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 5984894 - 5984846
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  5984894 atctcctctcctccattcccatcattaagatacaaatcagcttccaaat 5984846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 13012654 - 13012736
Alignment:
Q  55 atacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaa 138  Q
    |||||| | |||||||||||||| |||| ||||||||| |||||||||| || |||||| ||| ||||||||| ||||| ||||    
T  13012654 atacatcaatgttatactatatctaaaa-ggaacattgctagtgctatattatatcgatccaaaaaagaagcactatatccaaa 13012736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 9528651 - 9528720
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| |||||||||||||||| | ||||| ||||||||||||||| |||||| ||| ||||||||| ||||    
T  9528651 agtgctatactatatccaaaa-gaaacatcgttagtgctatactatatcgatccaaaaaagaagcactata 9528720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 9781953 - 9781889
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    |||| |||||||||||||||| | ||||||||||||||||||||  |||||| ||| |||||||||    
T  9781953 agtgctatactatatccaaaa-gaaacattgttagtgctatactgtatcgatccaaaaaagaagca 9781889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 3427723 - 3427613
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||| ||||||||||| | || || |||||||   |||| |||| ||||||||| ||||||| |||||| ||| |||||| ||     
T  3427723 ataccaaaaagagcaccatctgtgctatacatcaatgctacactatat-ataaaatgaac-ttgttagtgttatactatatcgatccaaaaaagaatcac 3427626  T
Q  129 tatatacaaaaaa 141  Q
    ||||| |||||||    
T  3427625 tatatccaaaaaa 3427613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 6916263 - 6916311
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  6916263 atctcctctcctccattcccatcatcaagatacagatcaacttccaaat 6916311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 8132889 - 8132841
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  8132889 atctcctctcctccattcccatcatcaagatacagatcaacttccaaat 8132841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 38331156 - 38331108
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  38331156 atctcctctcctccattcccatcatcaagatacagatcaacttccaaat 38331108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 52895102 - 52895150
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  52895102 atctcctctcctccattcccatcatcaagatacagatcaacttccaaat 52895150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 25257320 - 25257277
Alignment:
Q  200 ctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||    
T  25257320 ctctcttccattcccatcatcaagatacaaatcagcttccaaat 25257277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 37346631 - 37346702
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaa 138  Q
    ||||||||||| |||| |||||||||||| |||||||||| ||| ||  || ||||||||| ||||| ||||    
T  37346631 tatactatatcaaaaagggaacattgttaatgctatactatatcaatcaaaaaaagaagcactatatccaaa 37346702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 10822705 - 10822636
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| |||||||||||||||| | ||||||||||||| |||| || |||||| ||| ||||||||| ||||    
T  10822705 agtgctatactatatccaaaa-gaaacattgttagtgatatattatatcgatccaaaaaagaagcattata 10822636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 29168258 - 29168189
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| |||||||||||||||| | |||||||||||| |||||||| || ||| ||| ||||||||| ||||    
T  29168258 agtgatatactatatccaaaa-gaaacattgttagtactatactatattgatccaaaaaagaagcattata 29168189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 34096360 - 34096429
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||| ||||||||||| |||| | ||||||||||||||||||||| ||||||  || ||||||||| ||||    
T  34096360 agtgctatactatatctaaaa-gaaacattgttagtgctatactatatcgatctaaaaaagaagcactata 34096429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 52894950 - 52895077
Alignment:
Q  37 aagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatac- 135  Q
    ||||||| ||||||||  |||||| | || || ||||||||| |||| |||| ||||||||| ||||||| |||||| ||| ||| || || ||||| |     
T  52894950 aagagcaccatcagtgtaatacatcaatgctacactatatcc-aaaatgaac-ttgttagtgatatactatatcgatccaaaaaaaaatcactatatcca 52895047  T
Q  136 aaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||||||||| ||||||||| |||||||||    
T  52895048 aaaaaagaacacatcagtact-aagagttaa 52895077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 34432227 - 34432291
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    |||||||||||| ||| | ||||||||||||| ||||||| |||||| ||| ||||||||| ||||    
T  34432227 tatactatatcccaaa-gaaacattgttagtgttatactatatcgatccaaaaaagaagcactata 34432291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 14167375 - 14167316
Alignment:
Q  67 tatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagca 127  Q
    |||||||||||||||| |  |||||||||||| ||||||| |||||| ||| |||||||||    
T  14167375 tatactatatccaaaa-gatacattgttagtgttatactatatcgatccaagaaagaagca 14167316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 28948608 - 28948656
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||| ||||||| ||||| ||||||||||||||  ||||||||    
T  28948608 atctcctctcatccattctcatcatcaagatacaaatcaacttccaaat 28948656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 30324427 - 30324379
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||||||||| ||||| | ||||||||||||  ||||||||    
T  30324427 atctcctctcctccattctcatcatcgagatacaaatcaccttccaaat 30324379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 57
Target Start/End: Complemental strand, 47655017 - 47654989
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctata 57  Q
    |||||||||||||||||||||||||||||    
T  47655017 ataccaaaaagagcatcatcagtgctata 47654989  T

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Target: scaffold0112 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 41374 - 41458
Alignment:
Q  80 aaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    ||||||||| ||||||||| ||||||| |||||| ||| ||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  41374 aaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 41458  T

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Target: scaffold0112; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 41483 - 41531
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||| |||| |||||| ||||||||||||||| || |||||    
T  41483 atctcctctccttcatttccatcagcaagatacaaatcagcttgcaaat 41531  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 43849 - 43980
Alignment:
Q  33 caaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatata 132  Q
    ||||||||||| |||||||||||||||| | || || ||| ||||| ||||||||| ||||||||||||||||| |||||| | | |||||| || ||||    
T  43849 caaaaagagcaccatcagtgctatacatcaatgctacactgtatcc-aaaaggaac-ttgttagtgctatactatatcgatccgaaaaagaatcactata 43946  T
Q  133 tac-aaaaaagaacatatcagtactcaagagttaa 166  Q
    | | ||||||||||| |||| |||| |||||||||    
T  43947 tccaaaaaaagaacacatcaatact-aagagttaa 43980  T

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Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 44005 - 44053
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaatcagtttccaaat 243  Q
    |||||||||||| ||||||||||| ||||||||||||||  ||||||||    
T  44005 atctcctctccttcattcccatcatcaagatacaaatcaacttccaaat 44053  T

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Target: scaffold0285 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 13710 - 13607
Alignment:
Q  62 agtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaaga 161  Q
    ||||||||||||||| | |||| | ||||||||| || ||||||| || ||| ||| ||||||||| ||||| || ||||||||| ||| |||||| |||    
T  13710 agtgttatactatat-ctaaaatgtacattgttactgttatactatattgatccaa-aaagaagcactatatccataaaagaacacatcggtactccaga 13613  T
Q  162 gttaag 167  Q
    ||||||    
T  13612 gttaag 13607  T

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Target: scaffold0037 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 27092 - 27160
Alignment:
Q  97 tgctatactacatcgatacaataaagaagcaatatatacaaaaaagaacatatcagtactcaagagttaa 166  Q
    |||||||||| |||||| ||| |||||||||  |||| |||||||||||| ||||||||| |||||||||    
T  27092 tgctatactatatcgatccaaaaaagaagcaccatatccaaaaaagaacacatcagtact-aagagttaa 27160  T

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Target: scaffold0037; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 27185 - 27221
Alignment:
Q  195 atctcctctcctccattcccatcaacaagatacaaat 231  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27185 atctcctctcctccattcccatcatcaagatacaaat 27221  T

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Target: scaffold0250 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 6008 - 5902
Alignment:
Q  29 ataccaaaaagagcatcatcagtgctatacatgagtgttatactatatccaaaaaggaacattgttagtgctatactacatcgatacaataaagaagcaa 128  Q
    ||||||||||||||| |||| ||| ||||  | | || ||||||||||| ||||||||||||||||| || ||||||| ||| ||  || |||||||||     
T  6008 ataccaaaaagagcaccatcggtgttata--tcaatgctatactatatc-aaaaaggaacattgttaatgttatactatatcaatcaaaaaaagaagcac 5912  T
Q  129 tatatacaaa 138  Q
    ||||| ||||    
T  5911 tatatccaaa 5902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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