View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0802_low_62 (Length: 221)
Name: NF0802_low_62
Description: NF0802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0802_low_62 |
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Alignment Details
Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 34379087 - 34379199
Alignment:
| Q |
5 |
cttgcttctatatataccacttttctcattcgttcaatcatacaatcttctttctaaacattctcatatatcataagtctaataagtccttacctctttc |
104 |
Q |
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||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
34379087 |
cttgcttctatatataccacttttctcattcatttcatcacacaatcttctttctaaacattctcatatatcataagtcttataagtccttacctctttc |
34379186 |
T |
|
| Q |
105 |
tttcttgagtatt |
117 |
Q |
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||||||||||||| |
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| T |
34379187 |
tttcttgagtatt |
34379199 |
T |
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