View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0804_low_2 (Length: 448)

Name: NF0804_low_2
Description: NF0804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0804_low_2
NF0804_low_2
[»] chr1 (20 HSPs)
chr1 (29-369)||(11710062-11710402)
chr1 (385-430)||(34347510-34347555)
chr1 (385-430)||(16011359-16011404)
chr1 (382-430)||(18127574-18127622)
chr1 (382-430)||(46160570-46160618)
chr1 (385-424)||(39674262-39674301)
chr1 (391-430)||(40052150-40052189)
chr1 (383-430)||(46398838-46398885)
chr1 (385-430)||(3163412-3163457)
chr1 (385-430)||(4227985-4228030)
chr1 (385-430)||(23625082-23625127)
chr1 (384-425)||(24584029-24584070)
chr1 (385-430)||(25984614-25984659)
chr1 (385-430)||(31787308-31787353)
chr1 (385-430)||(32558136-32558181)
chr1 (385-430)||(42643347-42643392)
chr1 (385-430)||(43554819-43554864)
chr1 (385-430)||(44343641-44343686)
chr1 (385-430)||(49980264-49980309)
chr1 (385-429)||(10085951-10085995)
[»] chr6 (24 HSPs)
chr6 (385-430)||(14304585-14304630)
chr6 (384-430)||(10364449-10364495)
chr6 (385-430)||(4981134-4981179)
chr6 (385-430)||(8550408-8550453)
chr6 (327-378)||(17433650-17433701)
chr6 (384-430)||(6835951-6835997)
chr6 (384-430)||(8493394-8493440)
chr6 (384-430)||(9660222-9660268)
chr6 (384-426)||(32393456-32393498)
chr6 (385-430)||(2603393-2603438)
chr6 (385-430)||(6791770-6791815)
chr6 (385-430)||(8415001-8415046)
chr6 (385-430)||(13631060-13631105)
chr6 (385-430)||(19098757-19098802)
chr6 (385-430)||(21858765-21858810)
chr6 (385-430)||(28075017-28075062)
chr6 (385-430)||(30510752-30510797)
chr6 (385-430)||(35039832-35039877)
chr6 (385-429)||(6334718-6334762)
chr6 (385-429)||(10629314-10629358)
chr6 (384-424)||(11173477-11173517)
chr6 (384-424)||(26409292-26409332)
chr6 (384-424)||(32588921-32588961)
chr6 (327-359)||(33038903-33038935)
[»] chr8 (30 HSPs)
chr8 (384-430)||(28712574-28712620)
chr8 (384-430)||(28719921-28719967)
chr8 (384-430)||(28727563-28727609)
chr8 (392-430)||(38367443-38367481)
chr8 (385-430)||(26804824-26804869)
chr8 (385-424)||(6010111-6010150)
chr8 (385-428)||(6878753-6878796)
chr8 (383-430)||(9724823-9724870)
chr8 (384-430)||(9267799-9267845)
chr8 (384-430)||(30087724-30087770)
chr8 (384-430)||(31873416-31873462)
chr8 (385-430)||(548021-548066)
chr8 (385-430)||(597180-597225)
chr8 (385-430)||(2098966-2099011)
chr8 (385-430)||(13429307-13429352)
chr8 (385-430)||(17949433-17949478)
chr8 (385-430)||(18203016-18203061)
chr8 (385-430)||(22578444-22578489)
chr8 (385-430)||(24616753-24616798)
chr8 (385-430)||(25838470-25838515)
chr8 (385-430)||(29342945-29342990)
chr8 (385-430)||(29938529-29938574)
chr8 (385-430)||(29949337-29949382)
chr8 (385-430)||(35631266-35631311)
chr8 (385-430)||(42927354-42927399)
chr8 (382-430)||(167814-167862)
chr8 (384-424)||(19715472-19715512)
chr8 (385-429)||(24524422-24524466)
chr8 (385-429)||(27919423-27919467)
chr8 (392-424)||(37390742-37390774)
[»] chr7 (19 HSPs)
chr7 (384-430)||(6696617-6696663)
chr7 (384-430)||(23726372-23726418)
chr7 (385-423)||(25756590-25756628)
chr7 (385-430)||(1643503-1643548)
chr7 (384-424)||(5528629-5528669)
chr7 (384-424)||(27118844-27118884)
chr7 (385-424)||(40020546-40020585)
chr7 (384-430)||(24685424-24685470)
chr7 (384-430)||(28587173-28587219)
chr7 (385-430)||(3225674-3225719)
chr7 (385-430)||(25428419-25428464)
chr7 (384-429)||(42808240-42808285)
chr7 (385-430)||(42912208-42912253)
chr7 (385-430)||(44187121-44187166)
chr7 (385-430)||(44481225-44481270)
chr7 (385-430)||(45780659-45780704)
chr7 (385-429)||(29669512-29669556)
chr7 (385-429)||(36916906-36916950)
chr7 (385-429)||(46774349-46774393)
[»] chr4 (31 HSPs)
chr4 (391-429)||(22496464-22496502)
chr4 (385-430)||(5388397-5388442)
chr4 (385-430)||(29832540-29832585)
chr4 (384-424)||(34498317-34498357)
chr4 (385-424)||(17608975-17609014)
chr4 (391-430)||(49226404-49226443)
chr4 (385-430)||(4293926-4293971)
chr4 (384-429)||(6629110-6629155)
chr4 (385-430)||(11248745-11248790)
chr4 (385-430)||(15986370-15986415)
chr4 (385-430)||(18052955-18053000)
chr4 (385-430)||(21634807-21634852)
chr4 (385-430)||(23621861-23621906)
chr4 (385-430)||(26882962-26883007)
chr4 (385-430)||(29290108-29290153)
chr4 (385-430)||(29494760-29494805)
chr4 (385-430)||(32402919-32402964)
chr4 (385-430)||(33501577-33501622)
chr4 (385-430)||(34447870-34447915)
chr4 (385-430)||(36937437-36937482)
chr4 (385-430)||(37670155-37670200)
chr4 (385-430)||(41608622-41608667)
chr4 (385-430)||(41987960-41988005)
chr4 (385-430)||(45250309-45250354)
chr4 (385-430)||(48380812-48380857)
chr4 (385-430)||(51625076-51625121)
chr4 (385-430)||(55968780-55968825)
chr4 (385-429)||(13800570-13800614)
chr4 (385-429)||(22128960-22129004)
chr4 (385-429)||(30088595-30088639)
chr4 (384-424)||(51487545-51487585)
[»] chr2 (23 HSPs)
chr2 (384-430)||(23498275-23498321)
chr2 (385-429)||(12363860-12363904)
chr2 (383-430)||(24000120-24000167)
chr2 (383-430)||(31909571-31909618)
chr2 (384-430)||(3376429-3376475)
chr2 (384-430)||(28330983-28331029)
chr2 (385-430)||(4646390-4646435)
chr2 (385-430)||(6714125-6714170)
chr2 (385-430)||(12467868-12467913)
chr2 (385-430)||(14885257-14885302)
chr2 (385-430)||(19166179-19166224)
chr2 (385-430)||(26849820-26849865)
chr2 (385-430)||(40833707-40833752)
chr2 (385-430)||(41096164-41096209)
chr2 (385-430)||(42056275-42056320)
chr2 (385-430)||(44421815-44421860)
chr2 (385-429)||(6026849-6026893)
chr2 (385-429)||(14724039-14724083)
chr2 (385-429)||(22060887-22060931)
chr2 (385-429)||(22375016-22375060)
chr2 (388-424)||(29843662-29843698)
chr2 (339-383)||(37285181-37285225)
chr2 (385-429)||(40649291-40649335)
[»] scaffold0654 (1 HSPs)
scaffold0654 (385-430)||(2826-2871)
[»] chr3 (30 HSPs)
chr3 (385-430)||(28686160-28686205)
chr3 (385-430)||(29652237-29652282)
chr3 (400-430)||(3645718-3645748)
chr3 (384-430)||(41980113-41980159)
chr3 (384-430)||(44035381-44035427)
chr3 (384-430)||(53654963-53655009)
chr3 (385-430)||(4392325-4392370)
chr3 (385-430)||(6466331-6466376)
chr3 (385-430)||(8108674-8108719)
chr3 (385-430)||(17378410-17378455)
chr3 (385-430)||(19960823-19960868)
chr3 (385-430)||(21216664-21216709)
chr3 (385-430)||(23609231-23609276)
chr3 (385-430)||(29361326-29361371)
chr3 (385-430)||(30190562-30190607)
chr3 (385-430)||(33610088-33610133)
chr3 (385-430)||(35084335-35084380)
chr3 (385-430)||(40710510-40710555)
chr3 (385-430)||(43408498-43408543)
chr3 (385-430)||(44048338-44048383)
chr3 (385-430)||(45674117-45674162)
chr3 (385-430)||(45823884-45823929)
chr3 (385-430)||(47054235-47054280)
chr3 (385-430)||(52040247-52040292)
chr3 (385-430)||(52060269-52060314)
chr3 (391-424)||(52679591-52679624)
chr3 (385-430)||(54240823-54240868)
chr3 (385-429)||(7673904-7673948)
chr3 (385-429)||(31725862-31725906)
chr3 (385-429)||(52262464-52262508)
[»] chr5 (25 HSPs)
chr5 (382-430)||(36347201-36347249)
chr5 (385-424)||(4889945-4889984)
chr5 (384-430)||(27293295-27293341)
chr5 (384-430)||(35080496-35080542)
chr5 (384-430)||(40915410-40915456)
chr5 (385-430)||(2606418-2606463)
chr5 (385-430)||(7414854-7414899)
chr5 (385-430)||(8883437-8883482)
chr5 (385-430)||(13987785-13987830)
chr5 (385-430)||(22635535-22635580)
chr5 (385-430)||(27366231-27366276)
chr5 (385-430)||(28377874-28377919)
chr5 (385-430)||(29816443-29816488)
chr5 (385-430)||(34163362-34163407)
chr5 (385-430)||(34606793-34606838)
chr5 (385-430)||(35189414-35189459)
chr5 (381-430)||(36302688-36302737)
chr5 (385-430)||(40041138-40041183)
chr5 (385-430)||(42941005-42941050)
chr5 (384-424)||(8035985-8036025)
chr5 (385-429)||(9249168-9249212)
chr5 (385-429)||(9641259-9641303)
chr5 (398-430)||(12659244-12659276)
chr5 (385-429)||(18094478-18094522)
chr5 (384-424)||(43359897-43359937)
[»] scaffold0366 (1 HSPs)
scaffold0366 (385-430)||(49-94)
[»] scaffold0330 (1 HSPs)
scaffold0330 (391-424)||(13705-13738)


Alignment Details
Target: chr1 (Bit Score: 309; Significance: 1e-174; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 29 - 369
Target Start/End: Original strand, 11710062 - 11710402
Alignment:
Q  29 aaagctttcatcgatgctacatatattcaactgcaggaacttggtgaaggaaataacctgcaccttaattatgataatactaattagcaagaatgttgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11710062 aaagctttcatcgatgctacatatattcaactgcaggaacttggtgaaggaaataacctgcaccttaattatgataatactaattagcaagaatgttgat 11710161  T
Q  129 gatggaaaattgtctagttactttttgtaactaaagattttctcttaattgttagcacgatttgccgattaatgcatattttgaattaatgtttgtttta 228  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11710162 gatggaaaattgtctcgttactttttgtaactaaagattttctcttaattgttagcacgatttgccgattagtgcatattttgaattaatgtttgtttta 11710261  T
Q  229 agacatgaatgaaatgaaatctcccaatttatatcgataccctagagaattactaagatctctcttttaacaccatctaacatttattatcttatcgagt 328  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  11710262 agacatgaatcaaatgaaatctcccaatttatatcgataccctagagaattactaagaactctcttctaacaccatgtaacatttattatcttatcgagt 11710361  T
Q  329 gaaatctacgtgagtctcatcactttatgtgaaatcaattt 369  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  11710362 gaaatctatgtgagtctcgtcactttatgtgaaatcaattt 11710402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 34347555 - 34347510
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||    
T  34347555 tactctctccgttccaaattgtatgacgttttgggcatttcacaca 34347510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 16011359 - 16011404
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||    
T  16011359 tactctctccgtctcaaattgtatgacgttttgagcatttcacaca 16011404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 18127622 - 18127574
Alignment:
Q  382 acttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||||| ||||||  |||||||||||||||||||||||||| |||||    
T  18127622 acttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 18127574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 46160618 - 46160570
Alignment:
Q  382 acttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||||| ||||||  |||||||||||||||||||||||||| |||||    
T  46160618 acttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 46160570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 424
Target Start/End: Complemental strand, 39674301 - 39674262
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  39674301 tactccctccgtttcaaattgtatgacgtcttgggcattt 39674262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 430
Target Start/End: Original strand, 40052150 - 40052189
Alignment:
Q  391 ctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  40052150 ctccgttccaaattgtatgacgttttgggcatttcacaca 40052189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 46398885 - 46398838
Alignment:
Q  383 cttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||| ||||||  |||||||||||||||||||||||||| |||||    
T  46398885 cttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 46398838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 3163457 - 3163412
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  3163457 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 3163412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 4228030 - 4227985
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||| |||||||||||||||||||| ||||| |||||    
T  4228030 tactccctccgttccaaattgtatgacgttttggacatttcacaca 4227985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 23625127 - 23625082
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  23625127 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 23625082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 425
Target Start/End: Complemental strand, 24584070 - 24584029
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcatttt 425  Q
    |||||| ||||||  |||||||||||||||||||||||||||    
T  24584070 ttactccctccgtcccaaattgtatgacgttttgggcatttt 24584029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 25984659 - 25984614
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||| |||||||||||||||||||| ||||| |||||    
T  25984659 tactccctccgttccaaattgtatgacgttttggacatttcacaca 25984614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 31787353 - 31787308
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  31787353 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 31787308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 32558181 - 32558136
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  32558181 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 32558136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 42643392 - 42643347
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||  | |||||||||||||||||||||||| |||||    
T  42643392 tactctctccgtcgcgaattgtatgacgttttgggcatttaacaca 42643347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 43554819 - 43554864
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  43554819 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 43554864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 44343641 - 44343686
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  44343641 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 44343686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 49980264 - 49980309
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||| |||||||||||    
T  49980264 tactccctccgtcccaaattgtatgacgttttggacattttacaca 49980309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 10085995 - 10085951
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||  |||||||||||||||||||||||||| ||||    
T  10085995 tactccctccgtcccaaattgtatgacgttttgggcatttcacac 10085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 14304630 - 14304585
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||    
T  14304630 tactctctccgttccaaattgtatgacgttttgggcatttaacaca 14304585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 10364449 - 10364495
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||    
T  10364449 ttactccctccgtcccaaattgtatgacgttttgggcattttacaca 10364495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 4981134 - 4981179
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||    
T  4981134 tactctctccgtttcaaattgtataacgttttggacatttcacaca 4981179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 8550453 - 8550408
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||    
T  8550453 tactctctccgtcccaaattgtatgacgttttgggcatttcacaca 8550408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 378
Target Start/End: Original strand, 17433650 - 17433701
Alignment:
Q  327 gtgaaatctacgtgagtctcatcactttatgtgaaatcaatttccaaagtgt 378  Q
    |||||||||| |||||||||| || ||||||||||||  |||||||||||||    
T  17433650 gtgaaatctatgtgagtctcaccattttatgtgaaattcatttccaaagtgt 17433701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 6835997 - 6835951
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  6835997 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 6835951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 8493394 - 8493440
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  8493394 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 8493440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 9660222 - 9660268
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  9660222 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 9660268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 32393456 - 32393498
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcatttta 426  Q
    |||||| ||||||| |||||||||||||||||||| |||||||    
T  32393456 ttactccctccgttccaaattgtatgacgttttggacatttta 32393498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 2603393 - 2603438
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  2603393 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 2603438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 6791770 - 6791815
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| |||||| ||||||||||||||||||||| ||||| |||||    
T  6791770 tactccctccgtctcaaattgtatgacgttttggacatttcacaca 6791815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 8415001 - 8415046
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  8415001 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 8415046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 13631060 - 13631105
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  13631060 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 13631105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 19098802 - 19098757
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||| |||||||||||||||||||| ||||| |||||    
T  19098802 tactccctccgttccaaattgtatgacgttttggacatttcacaca 19098757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 21858810 - 21858765
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  21858810 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 21858765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 28075017 - 28075062
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| |||||| |||||||||||||||||||| |||||| |||||    
T  28075017 tactccctccgtctcaaattgtatgacgttttgagcatttcacaca 28075062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 30510752 - 30510797
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  30510752 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 30510797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 35039832 - 35039877
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  35039832 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 35039877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Original strand, 6334718 - 6334762
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| |||||| ||||||||||||||||||||| ||||| ||||    
T  6334718 tactccctccgtctcaaattgtatgacgttttggccatttcacac 6334762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Original strand, 10629314 - 10629358
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||| |||||||||||||||||||| ||||| ||||    
T  10629314 tactccctccgttccaaattgtatgacgttttggtcatttcacac 10629358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 11173517 - 11173477
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    |||||| ||||||  ||||||||||||||||||||||||||    
T  11173517 ttactccctccgtcccaaattgtatgacgttttgggcattt 11173477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 26409332 - 26409292
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    |||||| ||||||  ||||||||||||||||||||||||||    
T  26409332 ttactccctccgtcccaaattgtatgacgttttgggcattt 26409292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 32588961 - 32588921
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    |||||| ||||||  ||||||||||||||||||||||||||    
T  32588961 ttactccctccgtcccaaattgtatgacgttttgggcattt 32588921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 33038903 - 33038935
Alignment:
Q  327 gtgaaatctacgtgagtctcatcactttatgtg 359  Q
    ||||||||||||||| |||||||||||||||||    
T  33038903 gtgaaatctacgtgattctcatcactttatgtg 33038935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 28712620 - 28712574
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| |||||| ||||||||||||||||||||||||||| |||||    
T  28712620 ttactccctccgtctcaaattgtatgacgttttgggcatttcacaca 28712574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 28719967 - 28719921
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| |||||| ||||||||||||||||||||||||||| |||||    
T  28719967 ttactccctccgtctcaaattgtatgacgttttgggcatttcacaca 28719921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 28727609 - 28727563
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| |||||| ||||||||||||||||||||||||||| |||||    
T  28727609 ttactccctccgtctcaaattgtatgacgttttgggcatttcacaca 28727563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 430
Target Start/End: Original strand, 38367443 - 38367481
Alignment:
Q  392 tccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  38367443 tccgtttcaaattgtatgacgttttaggcattttacaca 38367481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 26804824 - 26804869
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| |||||| ||||||||||||||||||||||||||| |||||    
T  26804824 tactccctccgtatcaaattgtatgacgttttgggcatttcacaca 26804869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 424
Target Start/End: Original strand, 6010111 - 6010150
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  6010111 tactccctccgttttaaattgtatgacgttttgggcattt 6010150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 428
Target Start/End: Complemental strand, 6878796 - 6878753
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttaca 428  Q
    ||||| ||||||  ||||||||||||||||||||||||||||||    
T  6878796 tactccctccgtcccaaattgtatgacgttttgggcattttaca 6878753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 9724870 - 9724823
Alignment:
Q  383 cttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||| ||||||  |||||||||||||||||||||||||| |||||    
T  9724870 cttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 9724823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 9267799 - 9267845
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  9267799 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 9267845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 30087724 - 30087770
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  30087724 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 30087770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 31873416 - 31873462
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  31873416 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 31873462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 548021 - 548066
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  548021 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 548066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 597225 - 597180
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  597225 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 597180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 2098966 - 2099011
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||| |||||||||||||||||||| ||||| |||||    
T  2098966 tactccctccgttccaaattgtatgacgttttggtcatttcacaca 2099011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 13429352 - 13429307
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  13429352 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 13429307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 17949433 - 17949478
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  17949433 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 17949478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 18203016 - 18203061
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  18203016 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 18203061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 22578489 - 22578444
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  22578489 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 22578444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 24616798 - 24616753
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  24616798 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 24616753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 25838470 - 25838515
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  25838470 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 25838515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 29342990 - 29342945
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||  |||||||||||||||||||| ||||| |||||    
T  29342990 tactctctccgtcccaaattgtatgacgttttggacatttcacaca 29342945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 29938574 - 29938529
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  29938574 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 29938529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 29949382 - 29949337
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  29949382 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 29949337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 35631311 - 35631266
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  35631311 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 35631266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 42927399 - 42927354
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  ||||||||||||||||||| ||||||||||||    
T  42927399 tactccctccgtcccaaattgtatgacgttttgagcattttacaca 42927354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 167862 - 167814
Alignment:
Q  382 acttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||||| ||||||  |||||||||||||||||||| ||||| |||||    
T  167862 acttactccctccgtcccaaattgtatgacgttttggacatttcacaca 167814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 19715512 - 19715472
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    |||||| ||||||  ||||||||||||||||||||||||||    
T  19715512 ttactccctccgtcccaaattgtatgacgttttgggcattt 19715472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 24524466 - 24524422
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||  |||||||||||||||||||||||||| ||||    
T  24524466 tactccctccgtcccaaattgtatgacgttttgggcatttcacac 24524422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Original strand, 27919423 - 27919467
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||  |||||||||||||||||||||||||| ||||    
T  27919423 tactccctccgtcccaaattgtatgacgttttgggcatttcacac 27919467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 424
Target Start/End: Original strand, 37390742 - 37390774
Alignment:
Q  392 tccgtttcaaattgtatgacgttttgggcattt 424  Q
    |||||||||||||||| ||||||||||||||||    
T  37390742 tccgtttcaaattgtacgacgttttgggcattt 37390774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 6696617 - 6696663
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||    
T  6696617 ttactccctccgtcccaaattgtatgacgttttgggcattttacaca 6696663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 23726372 - 23726418
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||    
T  23726372 ttactccctccgtcccaaattgtatgacgttttgggcattttacaca 23726418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 423
Target Start/End: Complemental strand, 25756628 - 25756590
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcatt 423  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  25756628 tactctctccgttccaaattgtatgacgttttgggcatt 25756590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 1643503 - 1643548
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| |||||| ||||||||||||||||||||||||||| |||||    
T  1643503 tactccctccgtctcaaattgtatgacgttttgggcatttcacaca 1643548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 5528669 - 5528629
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  5528669 ttactctctccgtcccaaattgtatgacgttttgggcattt 5528629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 27118844 - 27118884
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  27118844 ttactctctccctctcaaattgtatgacgttttgggcattt 27118884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 424
Target Start/End: Complemental strand, 40020585 - 40020546
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  40020585 tactccctccgtctcaaattgtatgacgttttgggcattt 40020546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 24685424 - 24685470
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| |||||| ||||||||||||||||||||| ||||| |||||    
T  24685424 ttactccctccgtctcaaattgtatgacgttttggacatttcacaca 24685470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 28587219 - 28587173
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  28587219 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 28587173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 3225719 - 3225674
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  3225719 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 3225674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 25428464 - 25428419
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  25428464 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 25428419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Original strand, 42808240 - 42808285
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    |||||| ||||||| |||||||||||| ||||||| ||||||||||    
T  42808240 ttactccctccgttccaaattgtatgatgttttggccattttacac 42808285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 42912208 - 42912253
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  42912208 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 42912253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 44187166 - 44187121
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  44187166 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 44187121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 44481270 - 44481225
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  44481270 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 44481225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 45780659 - 45780704
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  45780659 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 45780704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 29669556 - 29669512
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||||||||||  |||||||||||||||||||| ||||| ||||    
T  29669556 tactctctccgtcccaaattgtatgacgttttggccatttcacac 29669512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 36916950 - 36916906
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||  |||||||||||||||||||||||||| ||||    
T  36916950 tactccctccgtcccaaattgtatgacgttttgggcatttcacac 36916906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 46774393 - 46774349
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||  |||||||||||||||||||||||||| ||||    
T  46774393 tactccctccgtcccaaattgtatgacgttttgggcatttcacac 46774349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 429
Target Start/End: Original strand, 22496464 - 22496502
Alignment:
Q  391 ctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  22496464 ctccgttccaaattgtatgacgttttgggcattttacac 22496502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 5388442 - 5388397
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| |||||| ||||||||||||||||||||||||||| |||||    
T  5388442 tactccctccgtctcaaattgtatgacgttttgggcatttcacaca 5388397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 29832540 - 29832585
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||    
T  29832540 tactccctccgttccaaattgtatgacgttttgggcatttcacaca 29832585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 34498357 - 34498317
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  34498357 ttactccctccgtctcaaattgtatgacgttttgggcattt 34498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 424
Target Start/End: Original strand, 17608975 - 17609014
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  17608975 tactccctccgttccaaattgtatgacgttttgggcattt 17609014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 430
Target Start/End: Original strand, 49226404 - 49226443
Alignment:
Q  391 ctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  49226404 ctccgtttaaaattgtatgacgttttgggcatttcacaca 49226443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 4293926 - 4293971
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  4293926 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 4293971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 6629155 - 6629110
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    |||||| ||||||  |||||||||||||||||||||||||| ||||    
T  6629155 ttactccctccgtcccaaattgtatgacgttttgggcatttcacac 6629110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 11248745 - 11248790
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  11248745 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 11248790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 15986370 - 15986415
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  15986370 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 15986415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 18053000 - 18052955
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  18053000 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 18052955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 21634852 - 21634807
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  21634852 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 21634807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 23621906 - 23621861
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  23621906 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 23621861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 26883007 - 26882962
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  26883007 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 26882962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 29290108 - 29290153
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||  |||||||||||| ||||||||||||| |||||    
T  29290108 tactctctccgtcccaaattgtatgatgttttgggcatttcacaca 29290153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 29494760 - 29494805
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  29494760 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 29494805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 32402964 - 32402919
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  32402964 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 32402919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 33501622 - 33501577
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  33501622 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 33501577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 34447915 - 34447870
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  34447915 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 34447870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 36937482 - 36937437
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  36937482 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 36937437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 37670200 - 37670155
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||  |||||||||||| ||||||||||||| |||||    
T  37670200 tactctctccgtcccaaattgtatgatgttttgggcatttaacaca 37670155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 41608622 - 41608667
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  41608622 tactccctccgtgccaaattgtatgacgttttgggcatttcacaca 41608667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 41987960 - 41988005
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  41987960 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 41988005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 45250354 - 45250309
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  45250354 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 45250309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 48380857 - 48380812
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  48380857 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 48380812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 51625121 - 51625076
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  51625121 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 51625076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 55968825 - 55968780
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  55968825 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 55968780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 13800614 - 13800570
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||| |||||||||||||||||||| ||||| ||||    
T  13800614 tactccctccgttccaaattgtatgacgttttggccatttcacac 13800570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 22129004 - 22128960
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||||||||||  ||||||||||||||||||| |||||| ||||    
T  22129004 tactctctccgtcccaaattgtatgacgttttgagcatttcacac 22128960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Original strand, 30088595 - 30088639
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||  |||||||||||||||||||||||||| ||||    
T  30088595 tactccctccgtcccaaattgtatgacgttttgggcatttcacac 30088639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 51487545 - 51487585
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    |||||| |||||| ||||||||||||||||||||| |||||    
T  51487545 ttactccctccgtctcaaattgtatgacgttttggacattt 51487585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 23498321 - 23498275
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||| |||||||||||||||||||||||||| |||||    
T  23498321 ttactccctccgttccaaattgtatgacgttttgggcatttcacaca 23498275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 12363904 - 12363860
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||    
T  12363904 tactccctccgtcccaaattgtatgacgttttgggcattttacac 12363860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 24000120 - 24000167
Alignment:
Q  383 cttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||| ||||||  |||||||||||||||||||||||||| |||||    
T  24000120 cttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 24000167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 31909571 - 31909618
Alignment:
Q  383 cttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||| ||||||  |||||||||||||||||||||||||| |||||    
T  31909571 cttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 31909618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 3376429 - 3376475
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  3376429 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 3376475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 28331029 - 28330983
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  28331029 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 28330983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 4646390 - 4646435
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| |||||| | ||||||||||||||||||||||||| |||||    
T  4646390 tactccctccgtcttaaattgtatgacgttttgggcatttcacaca 4646435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 6714170 - 6714125
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  6714170 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 6714125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 12467913 - 12467868
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  12467913 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 12467868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 14885302 - 14885257
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  14885302 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 14885257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 19166179 - 19166224
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  19166179 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 19166224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 26849820 - 26849865
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  26849820 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 26849865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 40833752 - 40833707
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  40833752 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 40833707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 41096209 - 41096164
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  41096209 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 41096164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 42056320 - 42056275
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  42056320 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 42056275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 44421860 - 44421815
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  44421860 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 44421815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Original strand, 6026849 - 6026893
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| |||||| ||||||||||||||||||||| ||||| ||||    
T  6026849 tactccctccgtctcaaattgtatgacgttttggtcatttcacac 6026893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 14724083 - 14724039
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||  |||||||||||||||||||| ||||||||||    
T  14724083 tactccctccgtcccaaattgtatgacgttttggccattttacac 14724039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 22060931 - 22060887
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||  |||||||||||||||||||||||||| ||||    
T  22060931 tactccctccgtcccaaattgtatgacgttttgggcatttcacac 22060887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Original strand, 22375016 - 22375060
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||| |||||||||||||||||||| ||||| ||||    
T  22375016 tactccctccgttccaaattgtatgacgttttggccatttcacac 22375060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 424
Target Start/End: Original strand, 29843662 - 29843698
Alignment:
Q  388 tctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  29843662 tctctccgtctcaaattgtatgatgttttgggcattt 29843698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 383
Target Start/End: Original strand, 37285181 - 37285225
Alignment:
Q  339 tgagtctcatcactttatgtgaaatcaatttccaaagtgtggtac 383  Q
    ||||||||||||||||| |||| ||| |||||||| |||||||||    
T  37285181 tgagtctcatcactttacgtgagatccatttccaatgtgtggtac 37285225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 40649335 - 40649291
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||  |||||||||||||||||||||||||| ||||    
T  40649335 tactccctccgtcccaaattgtatgacgttttgggcatttcacac 40649291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 2826 - 2871
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||    
T  2826 tactctctccgtcccaaattgtatgacgttttgggcatttcacaca 2871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000006; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 28686160 - 28686205
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||    
T  28686160 tactctctccgtcccaaattgtatgacgttttgggcatttcacaca 28686205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 29652282 - 29652237
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||    
T  29652282 tactctctccgtcccaaattgtatgatgttttgggcattttacaca 29652237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 430
Target Start/End: Original strand, 3645718 - 3645748
Alignment:
Q  400 aaattgtatgacgttttgggcattttacaca 430  Q
    |||||||||||||||||||||||||||||||    
T  3645718 aaattgtatgacgttttgggcattttacaca 3645748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 41980159 - 41980113
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||| ||||||||||||||||||| |||||| |||||    
T  41980159 ttactccctccgttccaaattgtatgacgttttgagcatttcacaca 41980113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 44035427 - 44035381
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  44035427 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 44035381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 53654963 - 53655009
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  53654963 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 53655009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 4392325 - 4392370
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  4392325 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 4392370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 6466331 - 6466376
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  6466331 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 6466376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 8108719 - 8108674
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  8108719 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 8108674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 17378455 - 17378410
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  17378455 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 17378410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 19960823 - 19960868
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  19960823 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 19960868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 21216664 - 21216709
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  21216664 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 21216709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 23609231 - 23609276
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  23609231 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 23609276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 29361326 - 29361371
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||  ||||||||||||||||||| |||||| |||||    
T  29361326 tactctctccgtcccaaattgtatgacgttttgagcatttcacaca 29361371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 30190607 - 30190562
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  30190607 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 30190562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 33610088 - 33610133
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  33610088 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 33610133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 35084335 - 35084380
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| |||||| |||||||||| |||||||||||||||| |||||    
T  35084335 tactccctccgtctcaaattgtaagacgttttgggcatttcacaca 35084380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 40710510 - 40710555
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  40710510 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 40710555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 43408543 - 43408498
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  43408543 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 43408498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 44048383 - 44048338
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| |||||| |||||||||||||||||||| |||||| |||||    
T  44048383 tactccctccgtctcaaattgtatgacgttttgagcatttcacaca 44048338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 45674117 - 45674162
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  45674117 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 45674162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 45823884 - 45823929
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  45823884 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 45823929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 47054280 - 47054235
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  47054280 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 47054235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 52040247 - 52040292
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  52040247 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 52040292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 52060269 - 52060314
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  52060269 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 52060314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 424
Target Start/End: Original strand, 52679591 - 52679624
Alignment:
Q  391 ctccgtttcaaattgtatgacgttttgggcattt 424  Q
    ||||||||||||||||||||||||||| ||||||    
T  52679591 ctccgtttcaaattgtatgacgttttgagcattt 52679624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 54240823 - 54240868
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  54240823 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 54240868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Original strand, 7673904 - 7673948
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| |||||| |||||||||||||||||||| |||||| ||||    
T  7673904 tactccctccgtctcaaattgtatgacgttttgagcatttcacac 7673948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 31725906 - 31725862
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| |||||| ||||||||||||||||||||| ||||| ||||    
T  31725906 tactccctccgtctcaaattgtatgacgttttggacatttcacac 31725862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 52262508 - 52262464
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||  |||||||||||||||||||||||||| ||||    
T  52262508 tactccctccgtcccaaattgtatgacgttttgggcatttcacac 52262464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 36347201 - 36347249
Alignment:
Q  382 acttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||||| ||||||  |||||||||||||||||||||||||| |||||    
T  36347201 acttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 36347249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 424
Target Start/End: Original strand, 4889945 - 4889984
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  4889945 tactccctccgtctcaaattgtatgacgttttgggcattt 4889984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 27293295 - 27293341
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  27293295 ttactccctccgtcccaaattgtatgacgttttgggcatttgacaca 27293341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 35080542 - 35080496
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  35080542 ttactcactccgtcccaaattgtatgacgttttgggcatttcacaca 35080496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 40915410 - 40915456
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  40915410 ttactccctccgtcccaaattgtatgacgttttgggcatttcacaca 40915456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 2606418 - 2606463
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  2606418 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 2606463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 7414899 - 7414854
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  7414899 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 7414854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 8883482 - 8883437
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  8883482 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 8883437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 13987830 - 13987785
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  13987830 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 13987785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 22635535 - 22635580
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||| |||||||||||||||||||| ||||| |||||    
T  22635535 tactccctccgttccaaattgtatgacgttttggacatttcacaca 22635580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 27366231 - 27366276
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  27366231 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 27366276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 28377919 - 28377874
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  28377919 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 28377874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 29816488 - 29816443
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  29816488 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 29816443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 34163407 - 34163362
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  34163407 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 34163362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 34606793 - 34606838
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  34606793 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 34606838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 35189459 - 35189414
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  35189459 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 35189414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 430
Target Start/End: Original strand, 36302688 - 36302737
Alignment:
Q  381 tacttactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    |||||||||  |||||| |||||||||||| ||||||||||||| |||||    
T  36302688 tacttactccatccgttccaaattgtatgatgttttgggcatttaacaca 36302737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 40041183 - 40041138
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  40041183 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 40041138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 42941050 - 42941005
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  42941050 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 42941005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 8036025 - 8035985
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    |||||| ||||||| |||||||||||||||||||| |||||    
T  8036025 ttactccctccgttccaaattgtatgacgttttggtcattt 8035985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 9249212 - 9249168
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||||||||||  |||||||||||||||||||| ||||| ||||    
T  9249212 tactctctccgtcccaaattgtatgacgttttggccatttcacac 9249168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 9641303 - 9641259
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||| ||||||| |||||||||||||||||||| ||||| ||||    
T  9641303 tactccctccgttccaaattgtatgacgttttggccatttcacac 9641259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 430
Target Start/End: Complemental strand, 12659276 - 12659244
Alignment:
Q  398 tcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||||||||||||||||||||||||| |||||    
T  12659276 tcaaattgtatgacgttttgggcatttcacaca 12659244  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Original strand, 18094478 - 18094522
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacac 429  Q
    ||||||||||||   ||||||||||||||||||||||||| ||||    
T  18094478 tactctctccgtcctaaattgtatgacgttttgggcatttcacac 18094522  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 43359937 - 43359897
Alignment:
Q  384 ttactctctccgtttcaaattgtatgacgttttgggcattt 424  Q
    |||||| ||||||  ||||||||||||||||||||||||||    
T  43359937 ttactccctccgtcccaaattgtatgacgttttgggcattt 43359897  T

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Target: scaffold0366 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 49 - 94
Alignment:
Q  385 tactctctccgtttcaaattgtatgacgttttgggcattttacaca 430  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||    
T  49 tactccctccgtcccaaattgtatgacgttttgggcatttcacaca 94  T

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Target: scaffold0330 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 424
Target Start/End: Original strand, 13705 - 13738
Alignment:
Q  391 ctccgtttcaaattgtatgacgttttgggcattt 424  Q
    ||||||| ||||||||||||||||||||||||||    
T  13705 ctccgttccaaattgtatgacgttttgggcattt 13738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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