View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0804_low_23 (Length: 250)
Name: NF0804_low_23
Description: NF0804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0804_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 29994693 - 29994933
Alignment:
| Q |
1 |
taatatttaattgtggtgttttagttcaagctagtaatgccaacatagttagagtgactaatttgttcttactaatctttgccataaaagaacatctagt |
100 |
Q |
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||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29994693 |
taatatttaattgtggtttgttagttcaagctagtaatgccaacatagttagaatgactaatttgttcttactaatctttgccataaaagaacatctagt |
29994792 |
T |
|
| Q |
101 |
ttcagataaatatccaattcagaaaataaattggtgcttattattaattcttaatgtcaattctattgaaagtgggaatagaaaaatctatctccttatc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
29994793 |
ttcagataaatatccaattcagaaaataaattggtgcttattattaattcttaatgttaattctattgaaagtgggaatagaaaaatctatctccttatc |
29994892 |
T |
|
| Q |
201 |
atcttcttttgttattgaagtaccaaaaaatctggtctgtg |
241 |
Q |
| |
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||||| |||||||||||||||||||| ||||||||| |||| |
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| T |
29994893 |
atcttgttttgttattgaagtaccaagaaatctggtttgtg |
29994933 |
T |
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