View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0805-3 (Length: 217)
Name: NF0805-3
Description: NF0805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0805-3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 49085964 - 49086173
Alignment:
| Q |
8 |
gatgaggccaagatcctgcttttagctggaagaattgcatttgcaggaatgatttcgtccgttcttacattatttctgtgccnnnnnnngagtagaatat |
107 |
Q |
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| T |
49085964 |
gatgaagccaagatcctgcttttagctggaagaattgcatttgcaggaatgatttcgtccgttcttacattatttctgtgcctttttttgagtagaatat |
49086063 |
T |
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| Q |
108 |
aagcacgattcataaaatatactctcaaattgtattttatcattcaaaaagattttttaaataacgcttcgaaacattgatgaattctgctactgtaatc |
207 |
Q |
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| T |
49086064 |
aagcaagattcataaaatatgctctaaaattgtattttatcattcaaaaagattttttaaataacgcttcgaaacattgatgaattctgcttctgtaacc |
49086163 |
T |
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| Q |
208 |
atttggggat |
217 |
Q |
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|||||||||| |
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| T |
49086164 |
atttggggat |
49086173 |
T |
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