View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0806_low_19 (Length: 250)
Name: NF0806_low_19
Description: NF0806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0806_low_19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 8 - 250
Target Start/End: Complemental strand, 7163897 - 7163655
Alignment:
| Q |
8 |
ccaataatattaagcctatgtatagcatcaataacaagcaatgaaaacaactcgcttcgcaatatgtcatatccacttcctataatatcatatttaatca |
107 |
Q |
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| T |
7163897 |
ccaataatattcagcctatgtatagcatcaataacaatcaatgaaaacaactcgcttcgcaatatgtcatatcctcttcatataatatcatatttaatca |
7163798 |
T |
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| Q |
108 |
tattaggatcttagatttgattatcaatatcctcgtcaataaaattaaggagtaaatttgagttacactcgttaaatacctcttagaagattttatatgt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7163797 |
tattaggatcttagatttgattatcaatatcctcgtcaataaaattaaggagtaaatttgagttacactcgttaaatacctcttagaagattttatatgt |
7163698 |
T |
|
| Q |
208 |
cttcaactgtgatgcaattattgtgtgtaagaggtggatgcca |
250 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7163697 |
cttcaactgtgatgcaattattgtgtgtaagaggtggatgcca |
7163655 |
T |
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