View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0807_low_9 (Length: 358)

Name: NF0807_low_9
Description: NF0807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0807_low_9
NF0807_low_9
[»] chr7 (23 HSPs)
chr7 (71-350)||(21714548-21714827)
chr7 (71-298)||(21772326-21772553)
chr7 (71-342)||(21788594-21788862)
chr7 (71-255)||(21726261-21726445)
chr7 (71-243)||(21785771-21785943)
chr7 (80-213)||(21664481-21664614)
chr7 (71-243)||(21682015-21682187)
chr7 (79-342)||(15713990-15714259)
chr7 (80-174)||(21628502-21628596)
chr7 (76-205)||(21705007-21705136)
chr7 (80-281)||(21689787-21689985)
chr7 (71-205)||(21992547-21992681)
chr7 (71-243)||(21623558-21623730)
chr7 (71-171)||(21764409-21764509)
chr7 (71-243)||(21647112-21647284)
chr7 (253-350)||(21786055-21786152)
chr7 (104-213)||(21792388-21792497)
chr7 (80-223)||(21807793-21807936)
chr7 (107-173)||(21652461-21652527)
chr7 (76-195)||(21745896-21746015)
chr7 (150-205)||(21656895-21656950)
chr7 (289-342)||(21705193-21705246)
chr7 (322-350)||(21772551-21772579)
[»] scaffold0182 (2 HSPs)
scaffold0182 (74-205)||(25741-25872)
scaffold0182 (248-316)||(25900-25968)


Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 71 - 350
Target Start/End: Original strand, 21714548 - 21714827
Alignment:
Q  71 ggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 170  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21714548 ggcaaatgaatatcaaggttgatcaacttgttcttgtaatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 21714647  T
Q  171 agatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactgtcatcattgggccacaccagatgagtcacagtcagagaagaagaagaac 270  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21714648 agatgaagaccagagtggattgataaaaagcatgatgaatttcctcgcctgtcatcattgggccacaccagatgagtcacagtcagagaagaagaaggac 21714747  T
Q  271 atggttccaaaaagaaaaggaaaaggagagcatagtttatcaatacgtaatgagtcacagtcagagacaccctttcatct 350  Q
    ||||||||||||||||||| | || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  21714748 atggttccaaaaagaaaagcagaaagagagcatagtttatcaatacgaaatgagtcacagttagagacaccctttcatct 21714827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 71 - 298
Target Start/End: Original strand, 21772326 - 21772553
Alignment:
Q  71 ggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 170  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21772326 ggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 21772425  T
Q  171 agatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactgtcatcattgggccacaccagatgagtcacagtcagagaagaagaagaac 270  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  21772426 agatgaagacgagagtggcttgatagaaagcatgatgaatttcctcgactgtcatcattgggccacaccagatgagtcacagtcagggaagaagaaggac 21772525  T
Q  271 atggttccaaaaagaaaaggaaaaggag 298  Q
    ||||||||||||||||||||| ||||||    
T  21772526 atggttccaaaaagaaaaggagaaggag 21772553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 71 - 342
Target Start/End: Original strand, 21788594 - 21788862
Alignment:
Q  71 ggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 170  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||    
T  21788594 ggcacatgaatattaaagttgatcaactggttcttgtgatgatggatgtgcttctgttggagaatcaacttccttacgtagtactcaagctattgtggaa 21788693  T
Q  171 agatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactgtcatcattgggccacaccagatgagtcacagtcagagaagaagaagaac 270  Q
    |||| |   ||| |||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| ||    
T  21788694 agataa---cgatagtgaattgataaaaagcatgatgactttcctcgactgtcatcattgggccacaccagatgagtcacagccagataaggagaaggac 21788790  T
Q  271 atggttccaaaaagaaaaggaaaaggagagcatagtttatcaatacgtaatgagtcacagtcagagacaccc 342  Q
    |||||||||||| |||| ||| ||||||| |||||| ||||||||   |||||||| |||| ||||||||||    
T  21788791 atggttccaaaaggaaagggagaaggagaacatagtgtatcaataacaaatgagtcccagttagagacaccc 21788862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 71 - 255
Target Start/End: Original strand, 21726261 - 21726445
Alignment:
Q  71 ggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 170  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21726261 ggcacatgaatattagggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggac 21726360  T
Q  171 agatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactgtcatcattgggccacaccagatgagtcacagtca 255  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  21726361 agatgaagacgagagtggattgatagaaagcatgatgaatttcgtcgacggtcatcattgggccacaccagatgagtcccagtca 21726445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 21785771 - 21785943
Alignment:
Q  71 ggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  21785771 ggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatgaagtcctcaaactattgtggaa 21785870  T
Q  171 agatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactgtcatcattgggccacaccagat 243  Q
    ||||   ||||| |||| ||||||| ||||||||| |||||||||| | ||||||||||||||||||||||||    
T  21785871 agatagcgacgagagtgaattgataaaaagcatgaagaatttcctcaaatgtcatcattgggccacaccagat 21785943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 21664481 - 21664614
Alignment:
Q  80 atattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaaga 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21664481 atattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaactaccttatcaagtactcaagctattgtggaaagatgaaga 21664580  T
Q  180 cgacagtggattgatagaaagcatgatgaatttc 213  Q
    | | |||||||||||||||||||| |||||||||    
T  21664581 caagagtggattgatagaaagcatcatgaatttc 21664614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 21682015 - 21682187
Alignment:
Q  71 ggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 170  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21682015 ggcacatgaatgttaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 21682114  T
Q  171 agatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactgtcatcattgggccacaccagat 243  Q
    ||||    | || |||| ||||||| |||  |||| |||||||||||||||||||||||||||||||| ||||    
T  21682115 agatagcaatgagagtgaattgataaaaattatgacgaatttcctcgactgtcatcattgggccacactagat 21682187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 79 - 342
Target Start/End: Original strand, 15713990 - 15714259
Alignment:
Q  79 aatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaag 178  Q
    ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |      
T  15713990 aatattaagcttgatcaactggatcttgtgataatggatgtgcttttgttggagaatcaacttccttatgaagtactcaagctattgtggaaagataaca 15714089  T
Q  179 acgacagtggattgatagaaagcatgatgaatttcctcgactgtcatcattgggccacaccagatgagtcacagtcagagaagaagaagaacatggttcc 278  Q
    |||| ||||  ||||||  | |||||  ||| ||||||  |  || ||||| ||  || |||||||||||| ||||| ||||| ||||||||  ||||||    
T  15714090 acgagagtgagttgataatatgcatgtggaaattcctcagccatcgtcatttggatacgccagatgagtcagagtcaaagaaggagaagaacggggttcc 15714189  T
Q  279 aaaaagaaaaggaaaaggagagcatagtttatcaa------tacgtaatgagtcacagtcagagacaccc 342  Q
    ||| ||||||||| ||||| |  ||||| ||||||      |||| ||||||||||||||||||||||||    
T  15714190 aaacagaaaaggagaaggacaatatagtgtatcaataccattacgaaatgagtcacagtcagagacaccc 15714259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 21628502 - 21628596
Alignment:
Q  80 atattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagat 174  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21628502 atattaagcttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatgaagtactcaagctattgtggaaagat 21628596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 76 - 205
Target Start/End: Original strand, 21705007 - 21705136
Alignment:
Q  76 atgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatg 175  Q
    ||||||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  21705007 atgaatattaaggttgatcaactggctcttgtgagggaggatgtgcttttgttggagaatcaactgccttatgaagtactcaagcttttgtggaaagatg 21705106  T
Q  176 aagacgacagtggattgatagaaagcatga 205  Q
    |||| || |||||||| ||| |||||||||    
T  21705107 aagatgagagtggattaataaaaagcatga 21705136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 80 - 281
Target Start/End: Original strand, 21689787 - 21689985
Alignment:
Q  80 atattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaaga 179  Q
    ||||||||||||||||||| | | |||||||| |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| |  |    
T  21689787 atattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatcaacttccttatgaagtactcgagctattgtggaaagataacaa 21689886  T
Q  180 cgacagtggattgatagaaagcatgatgaatttcctcgactgtcatcattgggccacaccagatgagtcacagtcagagaagaagaagaacatggttcca 279  Q
    | | |||| ||||||| |||||| || |||||||||||| |||| ||  ||||||| ||||| | |||||||| |||||||| ||||  || ||||||||    
T  21689887 caagagtgaattgataaaaagcacgacgaatttcctcgagtgtc-tc--tgggccagaccaggtaagtcacagccagagaaggagaaagacgtggttcca 21689983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 21992547 - 21992681
Alignment:
Q  71 ggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 170  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||    
T  21992547 ggcacatgaatattaaagttgatcaactggttcttgtgatgatggatgtgcttctgttggagaatcaacttccttacgtagtactcaagctattgtggaa 21992646  T
Q  171 agatgaagacgacagtggattgatagaaagcatga 205  Q
    |||| |  | || |||| ||||||| |||||||||    
T  21992647 agataacaatgagagtgaattgataaaaagcatga 21992681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 21623558 - 21623730
Alignment:
Q  71 ggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 170  Q
    |||| |||||||||||| ||||||||| |  |||||||||||| |||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  21623558 ggcagatgaatattaagcttgatcaacggaatcttgtgatgattgatgtggttttgttggagaatcaactgccttatgaagtactcaagctattgtggaa 21623657  T
Q  171 agatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactgtcatcattgggccacaccagat 243  Q
    |||| |  |||| | || |||||||   | |||||  |||||||||| |||||||| ||||||||||||||||    
T  21623658 agataacaacgagaatgaattgataatgaccatgaaaaatttcctcggctgtcatctttgggccacaccagat 21623730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 21764409 - 21764509
Alignment:
Q  71 ggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 170  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  21764409 ggcacatgaagattaaggttggtcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttacgaagtactcaagctattgtggaa 21764508  T
Q  171 a 171  Q
    |    
T  21764509 a 21764509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 21647112 - 21647284
Alignment:
Q  71 ggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaa 170  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||| ||||| | |||    
T  21647112 ggcagatgaatattaaggttgataaactggttcttgtgatgatggatgtgcttttgttggagaatcaactcccttacatagtactcaaactattattgaa 21647211  T
Q  171 agatgaagacgacagtggattgatagaaagcatgatgaatttcctcgactgtcatcattgggccacaccagat 243  Q
    |||| |  | || | || ||||||| | | |||||  ||||||||| | |||||||||||| |||||||||||    
T  21647212 agataacaatgagaatgaattgataaataccatgaaaaatttcctcaaatgtcatcattggaccacaccagat 21647284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 253 - 350
Target Start/End: Original strand, 21786055 - 21786152
Alignment:
Q  253 tcagagaagaagaagaacatggttccaaaaagaaaaggaaaaggagagcatagtttatcaatacgtaatgagtcacagtcagagacaccctttcatct 350  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  21786055 tcagagaaggagaaggacatggttccaaaaagaaaaggagaaggagaacatagtttatcaatacgaaatgagtcacagttagagacaccctttcatct 21786152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 21792388 - 21792497
Alignment:
Q  104 ttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcat 203  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||  || | |||| ||| |||||||||||    
T  21792388 ttgtgatgatggatgtgcttttgttggagaatcaactgccttatgaagtactcaagctattgtggaaagacgacaaccagagtgcattaatagaaagcat 21792487  T
Q  204 gatgaatttc 213  Q
    || |||||||    
T  21792488 gacgaatttc 21792497  T

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Target: chr7; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 21807936 - 21807793
Alignment:
Q  80 atattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaaga 179  Q
    |||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||| |  |    
T  21807936 atattaagcttgatcaactggttcttctgataacggatgtgcttttgttggagaatcaactgccttataaagtacttaagctattgtgggaagataacaa 21807837  T
Q  180 cgacagtggattgatagaaagcatgatgaatttcctcgactgtc 223  Q
     ||  ||| ||||||| ||| ||||| |||||||| | ||||||    
T  21807836 tgagggtgaattgataaaaatcatgaggaatttccccaactgtc 21807793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 21652461 - 21652527
Alignment:
Q  107 tgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaaga 173  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  21652461 tgatgatggatgtgcttttgttggaaaatcaacttccttatcaagtactcaagcttttgtggaaaga 21652527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 195
Target Start/End: Original strand, 21745896 - 21746015
Alignment:
Q  76 atgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaagatg 175  Q
    |||||||||||| |||||| | |  ||||||||||||| ||||| |||||||||||||||||||| |||||| |||||||| |||||||||| ||||||     
T  21745896 atgaatattaagcttgatctagttattcttgtgatgatcgatgtacttttgttggagaatcaactgccttatgaagtactctagctattgtgaaaagata 21745995  T
Q  176 aagacgacagtggattgata 195  Q
    |  |||| |||| |||||||    
T  21745996 acaacgagagtgaattgata 21746015  T

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Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 21656895 - 21656950
Alignment:
Q  150 agtactcaagctattgtggaaagatgaagacgacagtggattgatagaaagcatga 205  Q
    |||||||||||||||||||||||||||  || | |||| ||||||| |||||||||    
T  21656895 agtactcaagctattgtggaaagatgacaacaagagtgaattgataaaaagcatga 21656950  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 21705193 - 21705246
Alignment:
Q  289 ggaaaaggagagcatagtttatcaatacgtaatgagtcacagtcagagacaccc 342  Q
    ||||| ||||| |||||| |||||||||  ||||||||||||||||| ||||||    
T  21705193 ggaaatggagaacatagtgtatcaataccaaatgagtcacagtcagaaacaccc 21705246  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 350
Target Start/End: Original strand, 21772551 - 21772579
Alignment:
Q  322 gagtcacagtcagagacaccctttcatct 350  Q
    |||||||||||||||||||||||||||||    
T  21772551 gagtcacagtcagagacaccctttcatct 21772579  T

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Target: scaffold0182 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 25741 - 25872
Alignment:
Q  74 aaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctattgtggaaaga 173  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||| |    
T  25741 aaatgaatattaaggttgatcaactttttcttgtgatggtggatgtggttttgttggaaaatcaacttccttatgaagtactcaagctattgtggaaaaa 25840  T
Q  174 tgaagacgacagtggattgatagaaagcatga 205  Q
     ||  | || |||| ||||||| |||||||||    
T  25841 cgagaatgagagtgaattgatacaaagcatga 25872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 316
Target Start/End: Original strand, 25900 - 25968
Alignment:
Q  248 cacagtcagagaagaagaagaacatggttccaaaaagaaaaggaaaaggagagcatagtttatcaatac 316  Q
    |||||||||||||| ||||| |||||| |||||| | ||| ||| |||||||  ||||| |||||||||    
T  25900 cacagtcagagaaggagaaggacatgggtccaaagaaaaacggagaaggagaatatagtgtatcaatac 25968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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