View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0808_high_17 (Length: 358)

Name: NF0808_high_17
Description: NF0808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0808_high_17
NF0808_high_17
[»] chr1 (63 HSPs)
chr1 (1-170)||(39150327-39150496)
chr1 (1-170)||(17919462-17919631)
chr1 (1-170)||(313758-313927)
chr1 (1-170)||(44918033-44918202)
chr1 (1-175)||(41624838-41625012)
chr1 (1-170)||(6754480-6754649)
chr1 (1-170)||(30171887-30172057)
chr1 (1-170)||(30187428-30187598)
chr1 (39-170)||(30288864-30288995)
chr1 (29-159)||(39930812-39930942)
chr1 (1-158)||(8062213-8062370)
chr1 (1-138)||(32716195-32716332)
chr1 (35-170)||(6569985-6570120)
chr1 (1-170)||(13321884-13322054)
chr1 (1-170)||(1502720-1502889)
chr1 (1-170)||(34801976-34802145)
chr1 (40-142)||(52833500-52833602)
chr1 (18-172)||(51920429-51920584)
chr1 (14-170)||(30362995-30363152)
chr1 (1-170)||(23576414-23576583)
chr1 (9-170)||(36490795-36490957)
chr1 (1-71)||(51382380-51382450)
chr1 (3-170)||(22167345-22167513)
chr1 (1-135)||(21854152-21854286)
chr1 (1-170)||(38812748-38812918)
chr1 (1-172)||(23591706-23591878)
chr1 (1-170)||(6180194-6180364)
chr1 (4-172)||(7519994-7520164)
chr1 (1-170)||(35512733-35512903)
chr1 (1-98)||(39627643-39627741)
chr1 (1-109)||(7824919-7825028)
chr1 (1-74)||(22331631-22331704)
chr1 (83-170)||(3096300-3096387)
chr1 (1-170)||(6307511-6307680)
chr1 (40-169)||(35438762-35438892)
chr1 (1-172)||(25532217-25532389)
chr1 (32-139)||(31100964-31101071)
chr1 (3-78)||(11744921-11744996)
chr1 (34-171)||(5057043-5057181)
chr1 (40-169)||(9516628-9516758)
chr1 (85-170)||(10896446-10896531)
chr1 (4-176)||(25465170-25465342)
chr1 (1-78)||(34050376-34050453)
chr1 (1-78)||(43317498-43317574)
chr1 (45-98)||(43671742-43671795)
chr1 (4-72)||(3121130-3121197)
chr1 (85-169)||(12947555-12947639)
chr1 (9-136)||(25956665-25956793)
chr1 (20-78)||(19277815-19277873)
chr1 (1-94)||(23808443-23808536)
chr1 (4-78)||(40799351-40799425)
chr1 (4-78)||(47355471-47355544)
chr1 (1-74)||(3168166-3168238)
chr1 (1-78)||(23378598-23378674)
chr1 (1-58)||(36578340-36578397)
chr1 (2-78)||(32543143-32543219)
chr1 (46-109)||(33048173-33048237)
chr1 (1-139)||(38539095-38539231)
chr1 (1-139)||(38561313-38561449)
chr1 (4-78)||(30109099-30109173)
chr1 (47-176)||(39310780-39310910)
chr1 (116-169)||(5875216-5875269)
chr1 (30-78)||(2222328-2222375)
[»] chr7 (54 HSPs)
chr7 (1-170)||(19889349-19889518)
chr7 (1-170)||(36548460-36548629)
chr7 (1-170)||(5909282-5909451)
chr7 (1-170)||(39757110-39757279)
chr7 (1-170)||(9331970-9332139)
chr7 (1-170)||(3561878-3562047)
chr7 (1-170)||(12085931-12086100)
chr7 (1-136)||(47120228-47120363)
chr7 (1-170)||(7170011-7170180)
chr7 (1-167)||(24462958-24463124)
chr7 (26-172)||(384429-384574)
chr7 (1-170)||(23982755-23982925)
chr7 (1-96)||(24250322-24250417)
chr7 (1-170)||(47457461-47457631)
chr7 (1-173)||(45501467-45501640)
chr7 (37-168)||(18102232-18102364)
chr7 (1-171)||(25709398-25709569)
chr7 (1-170)||(33342997-33343166)
chr7 (1-123)||(19868122-19868245)
chr7 (1-170)||(46290019-46290188)
chr7 (1-184)||(4969781-4969965)
chr7 (1-142)||(39869131-39869271)
chr7 (3-97)||(24699146-24699240)
chr7 (1-168)||(42750297-42750459)
chr7 (1-170)||(32117823-32117992)
chr7 (1-170)||(34270274-34270439)
chr7 (40-169)||(7899487-7899617)
chr7 (1-177)||(29692533-29692710)
chr7 (64-168)||(8170593-8170697)
chr7 (3-78)||(12650831-12650906)
chr7 (13-170)||(8091312-8091470)
chr7 (1-172)||(26300581-26300751)
chr7 (83-168)||(41331458-41331543)
chr7 (4-139)||(12624649-12624783)
chr7 (1-71)||(39475856-39475927)
chr7 (1-170)||(7040252-7040421)
chr7 (4-78)||(44806945-44807019)
chr7 (111-172)||(24250617-24250678)
chr7 (13-78)||(31066829-31066894)
chr7 (1-78)||(38554246-38554323)
chr7 (47-139)||(47707915-47708008)
chr7 (111-171)||(22334020-22334080)
chr7 (4-98)||(27300438-27300534)
chr7 (45-98)||(8420905-8420959)
chr7 (45-98)||(11680090-11680144)
chr7 (1-94)||(24639551-24639644)
chr7 (1-98)||(47200922-47201019)
chr7 (1-50)||(4161890-4161939)
chr7 (115-168)||(26037216-26037269)
chr7 (115-172)||(29398132-29398189)
chr7 (1-58)||(29398227-29398284)
chr7 (42-78)||(3530207-3530242)
chr7 (62-169)||(5833424-5833532)
chr7 (46-98)||(16800557-16800609)
[»] chr2 (58 HSPs)
chr2 (1-170)||(27665044-27665213)
chr2 (1-170)||(16126559-16126728)
chr2 (1-168)||(14377433-14377600)
chr2 (1-170)||(12016675-12016844)
chr2 (1-173)||(16919151-16919323)
chr2 (1-168)||(19228434-19228601)
chr2 (1-139)||(26229885-26230022)
chr2 (1-139)||(22705463-22705601)
chr2 (4-139)||(13351242-13351378)
chr2 (5-169)||(16123291-16123455)
chr2 (1-168)||(15411624-15411792)
chr2 (35-169)||(8770887-8771021)
chr2 (39-170)||(4821323-4821454)
chr2 (173-262)||(38185863-38185953)
chr2 (1-139)||(39904079-39904217)
chr2 (1-125)||(10690791-10690915)
chr2 (1-170)||(9747325-9747495)
chr2 (1-170)||(5583558-5583727)
chr2 (1-173)||(7720123-7720296)
chr2 (1-173)||(20566014-20566187)
chr2 (45-172)||(15231883-15232011)
chr2 (1-170)||(43806368-43806538)
chr2 (1-173)||(23932573-23932746)
chr2 (30-168)||(2060044-2060183)
chr2 (1-139)||(36612762-36612901)
chr2 (1-139)||(36620613-36620752)
chr2 (4-78)||(43388859-43388933)
chr2 (1-175)||(7757781-7757955)
chr2 (1-170)||(9450265-9450435)
chr2 (29-170)||(24729577-24729719)
chr2 (1-170)||(25998002-25998172)
chr2 (10-98)||(22162149-22162237)
chr2 (1-96)||(12438723-12438817)
chr2 (1-176)||(34213943-34214121)
chr2 (14-172)||(16493530-16493691)
chr2 (10-170)||(38248420-38248579)
chr2 (46-172)||(5853461-5853588)
chr2 (2-172)||(45062207-45062378)
chr2 (1-169)||(12919351-12919521)
chr2 (7-77)||(40562171-40562241)
chr2 (10-172)||(41492131-41492292)
chr2 (10-98)||(2051631-2051720)
chr2 (30-182)||(29142111-29142264)
chr2 (1-100)||(34817552-34817651)
chr2 (46-172)||(22704590-22704717)
chr2 (85-168)||(26003348-26003431)
chr2 (73-170)||(4576326-4576423)
chr2 (1-70)||(4579889-4579958)
chr2 (1-139)||(37471771-37471912)
chr2 (126-178)||(6109523-6109575)
chr2 (1-72)||(40503080-40503151)
chr2 (116-170)||(8065247-8065301)
chr2 (37-94)||(15749278-15749336)
chr2 (3-49)||(21470831-21470877)
chr2 (1-59)||(26003603-26003661)
chr2 (10-75)||(14285371-14285435)
chr2 (1-74)||(16754979-16755052)
chr2 (46-78)||(38327861-38327893)
[»] chr3 (62 HSPs)
chr3 (1-166)||(11610923-11611088)
chr3 (1-172)||(20938065-20938237)
chr3 (1-170)||(13495302-13495472)
chr3 (20-170)||(16875025-16875175)
chr3 (1-170)||(3863338-3863507)
chr3 (1-170)||(38389455-38389625)
chr3 (1-139)||(50364199-50364337)
chr3 (1-112)||(51339242-51339353)
chr3 (1-132)||(54621256-54621387)
chr3 (4-174)||(46492339-46492510)
chr3 (1-170)||(32553375-32553544)
chr3 (18-169)||(40497073-40497224)
chr3 (39-170)||(29686367-29686498)
chr3 (1-170)||(2571277-2571446)
chr3 (1-176)||(51618058-51618231)
chr3 (3-170)||(36426409-36426579)
chr3 (1-179)||(50204411-50204590)
chr3 (1-170)||(10307775-10307944)
chr3 (1-169)||(23638050-23638219)
chr3 (1-169)||(54527707-54527876)
chr3 (1-72)||(12515573-12515643)
chr3 (4-78)||(46845533-46845607)
chr3 (1-78)||(37444155-37444231)
chr3 (30-139)||(38786355-38786463)
chr3 (1-169)||(42180060-42180229)
chr3 (39-171)||(24978693-24978825)
chr3 (37-167)||(23803049-23803180)
chr3 (37-171)||(38785924-38786059)
chr3 (2-78)||(2379165-2379238)
chr3 (1-78)||(24569330-24569407)
chr3 (9-132)||(35094972-35095092)
chr3 (1-169)||(51567821-51567988)
chr3 (111-170)||(11611095-11611154)
chr3 (13-78)||(9710964-9711029)
chr3 (1-169)||(37055367-37055536)
chr3 (93-169)||(41151734-41151810)
chr3 (111-170)||(23523065-23523124)
chr3 (14-169)||(31318660-31318818)
chr3 (46-172)||(33474471-33474598)
chr3 (1-132)||(37332123-37332253)
chr3 (1-79)||(30214102-30214179)
chr3 (1-78)||(47386930-47387008)
chr3 (1-169)||(8165654-8165823)
chr3 (1-74)||(24086992-24087065)
chr3 (1-139)||(53718314-53718454)
chr3 (10-98)||(53794781-53794870)
chr3 (3-59)||(54027043-54027098)
chr3 (4-94)||(13879883-13879973)
chr3 (1-98)||(1569262-1569360)
chr3 (1-78)||(8497513-8497593)
chr3 (84-170)||(49396472-49396558)
chr3 (1-58)||(43750060-43750117)
chr3 (45-105)||(22103031-22103090)
chr3 (4-169)||(27549549-27549721)
chr3 (50-172)||(35414807-35414930)
chr3 (11-50)||(38989455-38989494)
chr3 (116-171)||(40930175-40930230)
chr3 (105-179)||(36812371-36812444)
chr3 (1-74)||(15863002-15863075)
chr3 (1-58)||(35415134-35415191)
chr3 (9-78)||(49396367-49396436)
chr3 (49-105)||(22177972-22178027)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-169)||(5699-5868)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-170)||(52779-52948)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-170)||(145686-145855)
[»] chr8 (71 HSPs)
chr8 (1-170)||(10129112-10129281)
chr8 (1-170)||(39701803-39701972)
chr8 (1-170)||(7140459-7140628)
chr8 (1-169)||(13327942-13328110)
chr8 (1-142)||(9743870-9744011)
chr8 (2-170)||(19343836-19344005)
chr8 (1-175)||(1203610-1203784)
chr8 (1-170)||(14816126-14816295)
chr8 (1-170)||(14829445-14829614)
chr8 (1-170)||(35678275-35678444)
chr8 (1-156)||(40210835-40210990)
chr8 (18-139)||(8140593-8140714)
chr8 (2-170)||(9801678-9801846)
chr8 (1-170)||(26682076-26682246)
chr8 (1-142)||(38527829-38527974)
chr8 (1-170)||(31812121-31812291)
chr8 (33-176)||(18567410-18567553)
chr8 (1-170)||(26834569-26834739)
chr8 (1-169)||(4080395-4080563)
chr8 (1-170)||(3306055-3306224)
chr8 (1-169)||(4102851-4103019)
chr8 (1-169)||(4084544-4084712)
chr8 (30-170)||(39024857-39024997)
chr8 (1-170)||(2161396-2161565)
chr8 (1-175)||(8284563-8284739)
chr8 (5-100)||(39703466-39703561)
chr8 (1-170)||(12131991-12132161)
chr8 (1-170)||(38843712-38843882)
chr8 (20-168)||(44091346-44091494)
chr8 (20-100)||(45516316-45516395)
chr8 (1-163)||(36967077-36967240)
chr8 (1-170)||(12189588-12189758)
chr8 (1-170)||(12434016-12434186)
chr8 (1-170)||(26363990-26364159)
chr8 (1-172)||(38212942-38213115)
chr8 (4-170)||(9580109-9580276)
chr8 (1-94)||(45005978-45006072)
chr8 (1-168)||(20514640-20514809)
chr8 (38-170)||(29642648-29642781)
chr8 (1-78)||(33514593-33514670)
chr8 (1-170)||(28014858-28015026)
chr8 (1-59)||(7750676-7750734)
chr8 (74-168)||(45519564-45519658)
chr8 (13-78)||(37264521-37264586)
chr8 (1-98)||(34249685-34249784)
chr8 (1-132)||(34869560-34869692)
chr8 (1-98)||(1844632-1844731)
chr8 (17-170)||(5573312-5573464)
chr8 (20-174)||(16445732-16445886)
chr8 (1-170)||(27874681-27874849)
chr8 (83-142)||(35740957-35741016)
chr8 (46-172)||(40225985-40226112)
chr8 (1-170)||(6818025-6818195)
chr8 (88-170)||(31451420-31451502)
chr8 (1-169)||(32186194-32186363)
chr8 (2-74)||(12346015-12346087)
chr8 (11-74)||(6850674-6850737)
chr8 (115-170)||(14961663-14961718)
chr8 (1-98)||(10974626-10974724)
chr8 (1-78)||(13496824-13496902)
chr8 (30-112)||(39430522-39430606)
chr8 (1-77)||(35745982-35746058)
chr8 (1-71)||(40716283-40716353)
chr8 (1-94)||(33430189-33430283)
chr8 (1-74)||(11923023-11923096)
chr8 (30-112)||(32195874-32195954)
chr8 (107-168)||(45518067-45518128)
chr8 (45-168)||(7489654-7489778)
chr8 (122-170)||(13496709-13496757)
chr8 (30-78)||(15868053-15868101)
chr8 (102-142)||(29912132-29912172)
[»] chr5 (41 HSPs)
chr5 (1-170)||(2795532-2795701)
chr5 (1-173)||(31365947-31366121)
chr5 (1-169)||(15190881-15191050)
chr5 (1-169)||(34578020-34578188)
chr5 (1-139)||(30328358-30328496)
chr5 (9-170)||(4047429-4047590)
chr5 (1-178)||(8103572-8103749)
chr5 (1-170)||(11636740-11636909)
chr5 (5-172)||(11375972-11376140)
chr5 (1-172)||(12641991-12642162)
chr5 (1-139)||(9184216-9184354)
chr5 (4-169)||(28629890-28630056)
chr5 (34-169)||(41350244-41350379)
chr5 (1-170)||(18841705-18841875)
chr5 (1-170)||(30839790-30839959)
chr5 (1-170)||(36597588-36597757)
chr5 (1-170)||(3398228-3398398)
chr5 (1-135)||(24329670-24329804)
chr5 (1-97)||(5958196-5958293)
chr5 (30-169)||(16174623-16174762)
chr5 (1-167)||(40512960-40513126)
chr5 (66-169)||(14466495-14466598)
chr5 (29-168)||(31567493-31567633)
chr5 (20-170)||(6863584-6863734)
chr5 (34-139)||(18150454-18150561)
chr5 (1-172)||(32019982-32020154)
chr5 (1-58)||(10665077-10665134)
chr5 (107-168)||(30893744-30893805)
chr5 (1-98)||(33072685-33072785)
chr5 (4-94)||(3737952-3738042)
chr5 (1-71)||(11360194-11360265)
chr5 (1-44)||(11692758-11692801)
chr5 (1-74)||(26376666-26376739)
chr5 (33-109)||(38994136-38994213)
chr5 (1-72)||(11250056-11250126)
chr5 (53-139)||(26265075-26265162)
chr5 (33-92)||(29538768-29538827)
chr5 (1-98)||(35469561-35469660)
chr5 (41-79)||(15820274-15820312)
chr5 (1-59)||(24014799-24014857)
chr5 (1-58)||(32282819-32282876)
[»] chr4 (65 HSPs)
chr4 (1-169)||(23553578-23553747)
chr4 (1-170)||(7349697-7349866)
chr4 (4-170)||(29190816-29190982)
chr4 (7-170)||(10813494-10813658)
chr4 (33-170)||(4329635-4329772)
chr4 (20-173)||(53961350-53961503)
chr4 (30-170)||(41415557-41415697)
chr4 (1-170)||(35999947-36000109)
chr4 (1-169)||(16667385-16667554)
chr4 (8-176)||(27362406-27362575)
chr4 (1-169)||(10389269-10389437)
chr4 (29-169)||(48910803-48910943)
chr4 (1-170)||(54495637-54495807)
chr4 (1-173)||(23545484-23545657)
chr4 (62-170)||(23051382-23051490)
chr4 (1-170)||(19468202-19468372)
chr4 (5-170)||(27019272-27019438)
chr4 (1-170)||(34941286-34941456)
chr4 (5-172)||(47326890-47327058)
chr4 (5-172)||(47341686-47341854)
chr4 (4-170)||(49181083-49181250)
chr4 (1-170)||(8736811-8736980)
chr4 (1-170)||(17409832-17410002)
chr4 (1-170)||(19450900-19451070)
chr4 (1-170)||(50352311-50352480)
chr4 (4-169)||(52391309-52391475)
chr4 (1-93)||(49228365-49228457)
chr4 (1-170)||(9759142-9759311)
chr4 (6-170)||(39876844-39877008)
chr4 (1-167)||(24684844-24685012)
chr4 (1-170)||(40049567-40049736)
chr4 (1-72)||(10658543-10658613)
chr4 (1-72)||(10872688-10872758)
chr4 (5-100)||(49650223-49650318)
chr4 (1-98)||(2096879-2096977)
chr4 (1-170)||(33632203-33632372)
chr4 (1-112)||(6875509-6875621)
chr4 (92-170)||(49228754-49228832)
chr4 (5-170)||(27756574-27756739)
chr4 (46-172)||(4779434-4779561)
chr4 (1-170)||(16069207-16069375)
chr4 (1-170)||(25843299-25843472)
chr4 (1-135)||(39539472-39539607)
chr4 (1-40)||(48910965-48911004)
chr4 (4-170)||(51691353-51691519)
chr4 (4-58)||(40681960-40682014)
chr4 (1-74)||(3085360-3085433)
chr4 (1-78)||(24993549-24993626)
chr4 (1-78)||(49332341-49332418)
chr4 (49-169)||(55813920-55814041)
chr4 (13-112)||(24297392-24297492)
chr4 (30-168)||(37432868-37433007)
chr4 (13-78)||(13009848-13009913)
chr4 (1-172)||(19838689-19838859)
chr4 (30-79)||(23438193-23438242)
chr4 (30-98)||(37784932-37785001)
chr4 (45-172)||(36971326-36971454)
chr4 (30-121)||(38222323-38222415)
chr4 (115-170)||(18882267-18882322)
chr4 (7-78)||(42480015-42480086)
chr4 (1-58)||(3728257-3728315)
chr4 (45-98)||(35645073-35645127)
chr4 (1-43)||(36968296-36968338)
chr4 (3-61)||(49250444-49250502)
chr4 (40-172)||(1378066-1378197)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-170)||(13094-13263)
[»] chr6 (39 HSPs)
chr6 (1-173)||(10887037-10887210)
chr6 (14-169)||(31069583-31069738)
chr6 (1-170)||(2830681-2830850)
chr6 (1-138)||(5362925-5363062)
chr6 (12-139)||(22974604-22974731)
chr6 (12-139)||(23813670-23813797)
chr6 (1-139)||(1017809-1017948)
chr6 (1-170)||(18332688-18332858)
chr6 (1-169)||(6016864-6017033)
chr6 (1-169)||(8977467-8977636)
chr6 (1-170)||(31568121-31568287)
chr6 (1-175)||(28943764-28943938)
chr6 (1-170)||(14228126-14228295)
chr6 (1-170)||(34692362-34692532)
chr6 (1-139)||(30623334-30623473)
chr6 (1-170)||(17552587-17552756)
chr6 (1-78)||(26602523-26602600)
chr6 (36-170)||(17596385-17596519)
chr6 (4-170)||(27819627-27819796)
chr6 (5-170)||(31169763-31169929)
chr6 (1-72)||(33017733-33017803)
chr6 (1-59)||(12454074-12454132)
chr6 (33-168)||(17141315-17141451)
chr6 (1-170)||(29863302-29863472)
chr6 (14-171)||(30591162-30591320)
chr6 (18-95)||(3850577-3850654)
chr6 (1-50)||(17596321-17596370)
chr6 (1-169)||(31790917-31791086)
chr6 (1-90)||(32615540-32615632)
chr6 (8-57)||(2086949-2086998)
chr6 (111-170)||(3853062-3853121)
chr6 (4-172)||(4371850-4372019)
chr6 (1-74)||(24979246-24979319)
chr6 (1-78)||(31039712-31039789)
chr6 (1-72)||(1814881-1814951)
chr6 (9-123)||(34300379-34300493)
chr6 (109-142)||(26602480-26602513)
chr6 (33-97)||(29730318-29730383)
chr6 (84-140)||(16540696-16540752)
[»] scaffold0111 (2 HSPs)
scaffold0111 (1-170)||(37114-37284)
scaffold0111 (115-180)||(41105-41170)
[»] scaffold0018 (1 HSPs)
scaffold0018 (29-170)||(182080-182220)
[»] scaffold0009 (2 HSPs)
scaffold0009 (8-169)||(43479-43641)
scaffold0009 (30-98)||(191386-191454)
[»] scaffold0155 (1 HSPs)
scaffold0155 (12-170)||(3413-3572)
[»] scaffold0618 (1 HSPs)
scaffold0618 (20-168)||(8416-8564)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-172)||(94016-94188)
[»] scaffold0305 (1 HSPs)
scaffold0305 (33-172)||(17994-18134)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-78)||(22468-22549)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-94)||(13734-13828)
[»] scaffold0073 (1 HSPs)
scaffold0073 (1-170)||(16535-16704)
[»] scaffold0136 (1 HSPs)
scaffold0136 (84-168)||(1445-1529)
[»] scaffold0631 (1 HSPs)
scaffold0631 (1-50)||(450-499)
[»] scaffold0128 (1 HSPs)
scaffold0128 (17-77)||(44373-44431)
[»] scaffold0074 (1 HSPs)
scaffold0074 (119-171)||(45496-45548)


Alignment Details
Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 39150496 - 39150327
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39150496 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 39150397  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||||||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  39150396 cacaaattccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 39150327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 17919462 - 17919631
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||| ||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17919462 aacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 17919561  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||||||  |||||||| ||||||||||||||||||||| |   |||||||||||||||||||||||||    
T  17919562 cacaaattccaagtcaaagttactactttaaacttcttattatgtgcaaatttgcacatgatagaaaaac 17919631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 313758 - 313927
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  313758 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttgattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 313857  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||  |||| ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  313858 cacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 313927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 44918033 - 44918202
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||| |||||||| | ||||||||||||||||||    
T  44918033 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaa 44918132  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | || ||  || | ||| ||||||||||||| |||||| ||   | |||||||||||||||||||||||    
T  44918133 cataagttccaaattaaagttactactttaaatttcttaacatgtgtaaatttgcacatgatagaaaaac 44918202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 41624838 - 41625012
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||   |||||||| |||||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||     
T  41624838 aacatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaat 41624936  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctat 175  Q
      |||| ||  |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  41624937 gcacaagttccaagtcaaagttactactttaaacttcttatcatatgcaaatttgcacatgatagaaaaaccctat 41625012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 6754480 - 6754649
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||  |||||||| |||||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||     
T  6754480 aacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaat 6754578  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  6754579 gcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 6754649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 30171887 - 30172057
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | |||||||||||| |||     
T  30171887 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 30171986  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  |||||||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||    
T  30171987 gcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 30172057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 30187428 - 30187598
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | |||||||||||| |||     
T  30187428 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 30187527  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  |||||||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||    
T  30187528 gcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 30187598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 39 - 170
Target Start/End: Complemental strand, 30288995 - 30288864
Alignment:
Q  39 tagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 138  Q
    ||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||| ||  |||| |||||||||||||||||||||||    
T  30288995 tagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaaattactactttaaacttctt 30288896  T
Q  139 atcacaagcaaatttgcacatgatagaaaaac 170  Q
    | ||   | |||||||||||||||||||||||    
T  30288895 aacatgtgtaaatttgcacatgatagaaaaac 30288864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 159
Target Start/End: Complemental strand, 39930942 - 39930812
Alignment:
Q  29 taactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 128  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||||  | ||||| ||||||||||||||||| ||| |||| ||| |||||||||    
T  39930942 taactaaaagtagtaatttttcattgaaaacaaataattatttattaaaaactacatatataatataaaaaatacaagtttcaagttaaagttactactt 39930843  T
Q  129 taaacttcttatcacaagcaaatttgcacat 159  Q
    ||||||||||||||   ||||||||||||||    
T  39930842 taaacttcttatcatgtgcaaatttgcacat 39930812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 8062213 - 8062370
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||||  |  |||||||||||||||||    
T  8062213 aacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaaactatatatttaatataaaaaa 8062312  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcaca 158  Q
     | |||||| || | ||| |||||||||||||||| ||| ||   |||||||||||||    
T  8062313 cataaatttcaaattaaagttactactttaaactttttaacatgtgcaaatttgcaca 8062370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 32716332 - 32716195
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||| | ||||| ||||  |||||||| |||||||||| |||||| ||| ||||||||||||||||||    
T  32716332 aacatgtgcaatattgcacatgttaaggtaactaaatgaagtaacttttcgttgaaaacaaacaattattgattaaatgttacatatttaatataaaaaa 32716233  T
Q  101 tacaaattttaagtcaaaattactactttaaacttctt 138  Q
     |||| ||   | |||||||||||||||||||||||||    
T  32716232 cacaagttcctaatcaaaattactactttaaacttctt 32716195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 170
Target Start/End: Complemental strand, 6570120 - 6569985
Alignment:
Q  35 aaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaact 134  Q
    |||||| ||| |||| |||||||||||||||||||| |||||||| | |||||||||||||||||| |||| ||  |||| ||| |||||||||||||||    
T  6570120 aaagtactaacttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaact 6570021  T
Q  135 tcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||| ||   |||||||||||||||||||||||||    
T  6570020 tcttaacatgtgcaaatttgcacatgatagaaaaac 6569985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 13321884 - 13322054
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||| ||||||||| | |||||| |||||||| ||||| ||||||| |||||||||||| || |||||||  ||||||||||| |||     
T  13321884 aacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattttttcaaaagttttatatttaatattaaat 13321983  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||||||  ||  ||||||| ||| ||||||||||||| || | |||||||||||||||||||||||||    
T  13321984 gtacaaattccaatacaaaatttctattttaaacttcttaacatatgcaaatttgcacatgatagaaaaac 13322054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 1502889 - 1502720
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||| |  |||||||  |||||||||| ||||     
T  1502889 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaa-caacaattatttaacaaaaagttatatatttaatacaaaat 1502791  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||||||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  1502790 gttcaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 1502720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 34801976 - 34802145
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||  | |||||||||||| |||     
T  34801976 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaat 34802075  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      || || ||  || ||||||||| | ||||||||||||| ||   |||||||||||||||||||||||||    
T  34802076 gcac-aagttccagacaaaattaccattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 34802145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 52833602 - 52833500
Alignment:
Q  40 agtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctta 139  Q
    |||||||||| ||||||||| ||||||||||||||||||| | |||||||| ||||||||  |||||||| ||||||||||||||| |||||||||||||    
T  52833602 agtaatttttcattgaaaacaaacaattatttattaaaagctacatatttattataaaaatcacaaatttcaagtcaaaattactattttaaacttctta 52833503  T
Q  140 tca 142  Q
    |||    
T  52833502 tca 52833500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 51920584 - 51920429
Alignment:
Q  18 acatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtca 116  Q
    ||||||||| | || ||| |||||||||||||| ||||||| ||||||||||||||| |||||||  ||||||||||| ||| |||||||||||||   |    
T  51920584 acatgttaaaacaattaatagtagtaatttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatatacaaattttaatata 51920485  T
Q  117 aaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
    ||||| ||| |||||| || ||| ||   |||||||||||||||||||||||||||    
T  51920484 aaatttctattttaaatttattaacatgtgcaaatttgcacatgatagaaaaactc 51920429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 30363152 - 30362995
Alignment:
Q  14 ttgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaa 112  Q
    ||||||||||||||   ||||||| |||||| ||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||   |||| ||  ||    
T  30363152 ttgcacatgttaaggctactaaaaatagtaactttttattgaaaaccaacaattaattattaaaaacctacatatttaatataaaatgcacaagttccaa 30363053  T
Q  113 gtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||| |||||| |||||| || ||||||   |||||||||||||||||||||||||    
T  30363052 gtcaaagttactattttaaatttgttatcatgtgcaaatttgcacatgatagaaaaac 30362995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 23576583 - 23576414
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||| ||||||||||||||||||||| ||||||||||||  || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  23576583 aacatctgcaatattgcacatgttaaggtaactaaaagtaacaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 23576485  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||| ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  23576484 gttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 23576414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 36490795 - 36490957
Alignment:
Q  9 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaat 107  Q
    ||||||||||||||||||   || |||||||||||| ||||||||||||| ||||||||||||||| |||||||  ||||| |||| ||||  ||||| |    
T  36490795 caatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagttatatattaaatacaaaatgtacaagt 36490894  T
Q  108 tttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |  ||  |||| |||||| ||||||||||||| ||   |||||||||| ||||||||||||||    
T  36490895 tccaatgcaaagttactattttaaacttcttaacatgtgcaaatttgctcatgatagaaaaac 36490957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 51382380 - 51382450
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  51382380 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattt 51382450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 22167345 - 22167513
Alignment:
Q  3 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaat 101  Q
    ||||||||| |||||||||||||| | |||||| |||||||| ||||| ||||||| ||||||||||||||| ||||  |  ||||||||||| |||  |    
T  22167345 catgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaatgt 22167444  T
Q  102 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||| ||  ||  |||| || ||| ||||||||||||||||   ||||||||||||||||||| |||||    
T  22167445 acaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgataggaaaac 22167513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 21854286 - 21854152
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| ||||  |||||||||||| |||||||||||||||||| |||||||| ||||| ||||||| ||||||| | | ||||||||||||||     
T  21854286 aacatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaat 21854188  T
Q  100 atacaaattttaagtcaaaattactactttaaactt 135  Q
     ||||| ||  |||||||| |||| |||||||||||    
T  21854187 gtacaagttccaagtcaaagttaccactttaaactt 21854152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 38812748 - 38812918
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||| ||||||||| | |||||| |||||||| ||||| ||  ||| ||||||||||||||| |||||||  ||||||||||| |||     
T  38812748 aacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttagaaaacaacaattatttattcaaaagttttatatttaatattaaat 38812847  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||| ||   |||||| ||| ||| ||||||||| ||   |||||||||||||||||||||||||    
T  38812848 gtacaagtttcaatataaaatttctattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaac 38812918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 23591706 - 23591878
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||   |||||||| |||||| ||||||||||||| ||| ||||||||||| |||||||  |||||||||| ||||     
T  23591706 aacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagttatatatttaatacaaaat 23591805  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
     ||||| ||  ||  |||| ||  || || ||| |||||| ||   |||||||||||||||||||||||||||    
T  23591806 gtacaagttccaatgcaaagttgttatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaactc 23591878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 6180194 - 6180364
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| |||   | ||||||||||| |||||||  ||||||||||| |||     
T  6180194 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaattataattatttatttaaaagttttatatttaatattaaat 6180293  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||  ||   |||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  6180294 gtacaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 6180364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 7520164 - 7519994
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaata 102  Q
    |||||||||||||||||||||||   ||||||||||||||| |||||||| ||||  || | ||||||||||||| |||  ||||| |||| ||||  ||    
T  7520164 atgtgcaatattgcacatgttaaagcaactaaaagtagtaaatttttattaaaaaataatacttatttattaaaatgttatatattaaatacaaaatgta 7520065  T
Q  103 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaa-tttgcacatgatagaaaaactc 172  Q
    ||||||| ||  |||| ||  || ||||||||||||| ||   | ||| ||||||||||||||||||||||    
T  7520064 caaatttcaatgcaaagttgttattttaaacttcttaacatgtgaaaattttgcacatgatagaaaaactc 7519994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 35512733 - 35512903
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||| ||||||| | |||||| |||||||| ||||| ||| ||| ||||| |||| |||| |||||||  ||||||||||| |||     
T  35512733 aacatgtgcaacattgcaaatgttaaaacaactaatagtagtaactttttcttggaaaacaacatttatatattcaaaagttttatatttaatattaaat 35512832  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||   |||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  35512833 gtgcaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 35512903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 39627741 - 39627643
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    ||||||||||||||| |||||||||||  |||||||| ||| || |||| |||||||| ||||||| | ||||| ||||||| ||||||||||||||||    
T  39627741 aacatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttacatatttaatataaaa 39627643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7825028 - 7824919
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| | ||||||||||||| |||||||  ||||||||||| |||     
T  7825028 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaaccacaattatttattcaaaagttttatatttaatattaaat 7824929  T
Q  100 atacaaattt 109  Q
     |||||||||    
T  7824928 gtacaaattt 7824919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22331631 - 22331704
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 74  Q
    ||||||||||| |||||||||||||| ||| |||| |||||||| ||||| ||||||| |||||||||||||||    
T  22331631 aacatgtgcaacattgcacatgttaaaatatctaatagtagtaactttttcttgaaaaacaacaattatttatt 22331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 3096300 - 3096387
Alignment:
Q  83 catatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||||||||||||||| | || |||||||| ||||||| ||||||||| || ||||||   |||||||||||||| ||||||||||    
T  3096300 catatttaatataaaaaacataagttttaagttaaaattattactttaaattttttatcatgtgcaaatttgcacataatagaaaaac 3096387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 6307511 - 6307680
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatat-ttaatataaaaa 99  Q
    ||||||||||| |||||| |||||||  ||||||||||  | || | ||||||| ||| ||||||||||||||||||| ||  |||| |||||| ||||     
T  6307511 aacatgtgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatt-tatatattaatagaaaat 6307609  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | |||| ||  || |||||  || |||||||||||||||| ||   |||||||||||||||||| ||||||    
T  6307610 acacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatttgcacatgatataaaaac 6307680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 169
Target Start/End: Original strand, 35438762 - 35438892
Alignment:
Q  40 agtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 138  Q
    ||||| |||| |||||||| || ||||| |||||||||| |||  ||||||||||||||| | ||||||| ||||  ||| |||| | |||||| |||||    
T  35438762 agtaacttttaattgaaaaacaccaattgtttattaaaaagttatatatttaatataaaatacacaaattataagataaacttaccattttaaatttctt 35438861  T
Q  139 atcacaagcaaatttgcacatgatagaaaaa 169  Q
    | ||   ||||||||||||||||||||||||    
T  35438862 aacatgtgcaaatttgcacatgatagaaaaa 35438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 25532217 - 25532389
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||| ||| || ||||||||||| |||||||| |||| ||| ||||| |||  || ||||| | | ||||| |||||||  ||||||||||| |||     
T  25532217 aacatgttcaacatcgcacatgttaaaataactaacagtaataacttttttttgggaaacaacactaaattatttaaaagttttatatttaatattaaat 25532316  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
     || |||||||||  ||||||| ||  ||||||||| ||| ||   ||||||||||| |||||||||||||||    
T  25532317 gtataaattttaatacaaaatttcttttttaaactttttaacatgcgcaaatttgcatatgatagaaaaactc 25532389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 31101071 - 31100964
Alignment:
Q  32 ctaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactacttta 130  Q
    |||||||||||||||||  |||||||| ||||| ||||||||||||| |   ||||||||||||||||   |||| |||||||||||| |||| ||||||    
T  31101071 ctaaaagtagtaattttc-attgaaaaacaacacttatttattaaaaagcaacatatttaatataaaatgcacaagttttaagtcaaagttaccacttta 31100973  T
Q  131 aacttctta 139  Q
    || ||||||    
T  31100972 aatttctta 31100964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 11744996 - 11744921
Alignment:
Q  3 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||| |||||||||||||   || ||||||||  || ||||||||||||| |||||||||||||||||||    
T  11744996 catgtgcaatgttgcacatgttaaagaaattaaaagtataaactttttattgaaaaacaacaattatttattaaaa 11744921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 5057043 - 5057181
Alignment:
Q  34 aaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaa 132  Q
    ||||||||||||| |||||| |||| ||| | | ||||||||||| | |  |||||||||||||||  ||||| ||| |||||||| |||| ||||||||    
T  5057043 aaaagtagtaattatttatttaaaaacaatattaatttattaaaaagatatatatttaatataaaatgtacaagtttcaagtcaaagttaccactttaaa 5057142  T
Q  133 cttcttatcacaagcaaatttgcacatgatagaaaaact 171  Q
    ||| | | ||   ||||||||||| || |||||||||||    
T  5057143 cttttgaacatttgcaaatttgcatataatagaaaaact 5057181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 169
Target Start/End: Original strand, 9516628 - 9516758
Alignment:
Q  40 agtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 138  Q
    ||||| |||| |||||||| || |||||||||||||||| |||  ||||||||||||||| | |||| || ||||  ||| |||| | |||||| |||||    
T  9516628 agtaacttttcattgaaaaacaccaattatttattaaaaagttatatatttaatataaaatacacaagttataagagaaacttaccattttaaatttctt 9516727  T
Q  139 atcacaagcaaatttgcacatgatagaaaaa 169  Q
    | ||   |||||||| |||||||||||||||    
T  9516728 aacatgtgcaaatttacacatgatagaaaaa 9516758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 10896446 - 10896531
Alignment:
Q  85 tatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||||||||||||| |||| ||  |||| ||| |||||||||||||||||||| ||   |||| ||| ||||||||||||||||    
T  10896446 tatttaatataaaaaacacaagttcaaagttaaagttactactttaaacttcttaacatgtgcaattttacacatgatagaaaaac 10896531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 25465170 - 25465342
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttat-taaaagttgcatatttaatataaaaaata 102  Q
    |||||||||||||||||||||||  | ||||||||||| ||  ||||||||| || ||||||||||||||  |||||||  ||||||   || |||   |    
T  25465170 atgtgcaatattgcacatgttaaagtcactaaaagtagcaa-cttttattgagaaacaacaattatttatcaaaaagttaaatattttccattaaatgca 25465268  T
Q  103 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctatt 176  Q
    ||| ||  ||  |||| |||||| ||| ||||||||| ||   ||||||||||||||||||||||||| |||||    
T  25465269 caagttccaatgcaaatttactattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctatt 25465342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34050453 - 34050376
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||||||||||||||   ||| |||||||  || || |||||||||| |||||||||||||| ||||    
T  34050453 aacatgtgcaatattgcacatgttaaagcaaccaaaagtaacaaattattattgaaaaacaacaattatttatcaaaa 34050376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43317498 - 43317574
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||||| |||||||||   ||||||||||||||| | ||| ||||||| ||||||| |||||||||||    
T  43317498 aacatgtgcaatattgtacatgttaaagcaactaaaagtagtaactattttttgaaaa-caacaatcatttattaaaa 43317574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 43671742 - 43671795
Alignment:
Q  45 ttttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaa 98  Q
    ||||||||| |||| ||||||||||||||||||||||  |||||||||||||||    
T  43671742 ttttttatttaaaatcaacaattatttattaaaagttatatatttaatataaaa 43671795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 3121130 - 3121197
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 72  Q
    |||||||||||| || |||||||| ||| ||||||||| || ||||||||| |||||||||||||||||    
T  3121130 atgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattattta 3121197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 12947639 - 12947555
Alignment:
Q  85 tatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||||||||||||||   |||| |||||||||||| |||||| ||||||||||||| || | | ||||| |||||||||| |||||    
T  12947639 tatttaatataaaatgcacaagttttaagtcaaagttactaatttaaacttcttaccatatgtaaattcgcacatgataaaaaaa 12947555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 25956665 - 25956793
Alignment:
Q  9 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaatacaaat 107  Q
    ||||||||||||| |||| | |||||| | || ||| ||||| ||||||| ||||||||||||| |||||||||  ||||||||||| |||  || ||||    
T  25956665 caatattgcacatattaaaacaactaataataataactttttcttgaaaaacaacaattatttatttaaaagttttatatttaatattaaatgtataaat 25956764  T
Q  108 tttaagtcaaaattactactttaaacttc 136  Q
    || |   ||||||| ||| ||||||||||    
T  25956765 ttcagtacaaaatttctattttaaacttc 25956793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 19277815 - 19277873
Alignment:
Q  20 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||| | ||| || |||||||| ||||||||||||| |||||||||||||||||||    
T  19277815 atgttaaaacaacaaagagtagtaagtttttattgaaaaacaacaattatttattaaaa 19277873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23808443 - 23808536
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatat 94  Q
    ||||||| ||| |||||||||||||| |||||| | |||||||| ||||| ||| ||| ||||| ||||||||| |||||||  |||||||||||    
T  23808443 aacatgtacaacattgcacatgttaaaataactgatagtagtaa-tttttcttggaaaacaacatttatttattcaaaagtttgatatttaatat 23808536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 40799425 - 40799351
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||||||||||    |||||||||||  || |||||||||||||  || |||||||||||||||    
T  40799425 atgtgcaatattgcacatgttagagcaactaaaagtatgaactttttattgaaaaataaaaattatttattaaaa 40799351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 47355544 - 47355471
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||||||||||||   |||||||||||  || ||||||||||||| ||||||||| |||| ||||    
T  47355544 atgtgcaatattgcacatgttaaagcaactaaaagtataaactttttattgaaaa-caacaattacttatcaaaa 47355471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3168238 - 3168166
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 74  Q
    ||||||||||| |||||||||||||| | |||||| ||| | |||||||| ||| ||| |||||||||||||||    
T  3168238 aacatgtgcaacattgcacatgttaaaacaactaatagtgggaatttttt-ttggaaaacaacaattatttatt 3168166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23378674 - 23378598
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||| || ||||||| | |||||||| || ||| |||||||||||||  ||||||||||| ||||||    
T  23378674 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacaattatttgttaaaa 23378598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36578340 - 36578397
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 58  Q
    ||||||||||||||||||||||||||   || ||||||||||||||| ||||| ||||    
T  36578340 aacatgtgcaatattgcacatgttaaagcaattaaaagtagtaatttcttattaaaaa 36578397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 32543219 - 32543143
Alignment:
Q  2 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||| |||| || ||||  |||  |||||||| | |||||||||||||  |||||||||||||||||||    
T  32543219 acatgtgcaatactgcatattttaaagtaataaaaagtagcatttttttattgaaagacaacaattatttattaaaa 32543143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 33048237 - 33048173
Alignment:
Q  46 tttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattt 109  Q
    |||||||| ||||  |||||||||||||||||| |||  ||||||||||||||| ||||||||||    
T  33048237 tttttattaaaaaataacaattatttattaaaaagttatatatttaatataaaatatacaaattt 33048173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 38539095 - 38539231
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||||  ||||||| |||| || |||  |||| ||| || ||||||||  | |||||||   |||||  |||| || |    
T  38539095 aacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctattt--tatagaata 38539192  T
Q  101 tacaaattttaagtcaaaattactactttaaacttctta 139  Q
    |||||||||||||  ||| || | |||||||| ||||||    
T  38539193 tacaaattttaagataaacttgccactttaaatttctta 38539231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 38561313 - 38561449
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||||  ||||||| |||| || |||  |||| ||| || ||||||||  | |||||||   |||||  |||| || |    
T  38561313 aacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctattt--tatagaata 38561410  T
Q  101 tacaaattttaagtcaaaattactactttaaacttctta 139  Q
    |||||||||||||  ||| || | |||||||| ||||||    
T  38561411 tacaaattttaagataaacttgccactttaaatttctta 38561449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 30109173 - 30109099
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||| |||||||  |||||||||   |||||||||||| |||||| |||  |||| |||||||||||||||||||    
T  30109173 atgtacaatattatacatgttaaagaaactaaaagtagcaattttatatgaaaaaacaacaattatttattaaaa 30109099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 39310910 - 39310780
Alignment:
Q  47 ttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaa 145  Q
    |||| ||| ||| ||||||||||||||| |||||||  ||| ||||||| |||  |  |||||  ||  ||||||| ||| ||||||||| ||| ||       
T  39310910 ttttcttggaaaacaacaattatttattcaaaagttttatacttaatattaaatgtgaaaattccaatacaaaatttctattttaaactttttaacatgt 39310811  T
Q  146 gcaaatttgcacatgatagaaaaactctatt 176  Q
    ||||||||||||||||||||||||| |||||    
T  39310810 gcaaatttgcacatgatagaaaaaccctatt 39310780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 5875269 - 5875216
Alignment:
Q  116 aaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    |||||| ||| ||||||||||||| ||   ||||||||||||||||||||||||    
T  5875269 aaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 5875216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 2222375 - 2222328
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||| |||| |||||||| ||| |||||||||||||||    
T  2222375 aactaaaagtagtaactttt-attgaaaaacaataattatttattaaaa 2222328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 4e-60; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 19889349 - 19889518
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19889349 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 19889448  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  19889449 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 19889518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 36548629 - 36548460
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||  || ||||||||||||||||||    
T  36548629 aacatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgattaaatattacatatttaatataaaaaa 36548530  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||||||||||||||| |||||| ||||||||||||| ||   |||||||||||||||||| ||||||    
T  36548529 tacaaattttaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgataaaaaaac 36548460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 5909451 - 5909282
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||||  ||||||||| ||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  5909451 aacatgtgcaatattgcacatgttaaggcaactaaaagcagtaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaa 5909352  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||| |||||||| |||||||||||||||||||||||   |||||||| ||||||||||||||||    
T  5909351 cacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttacacatgatagaaaaac 5909282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 39757279 - 39757110
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||| | ||||||||||||||||||    
T  39757279 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaa 39757180  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||||||| |||| ||| |||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  39757179 cacaaatttcaagttaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 39757110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 9331970 - 9332139
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||| ||| ||||||||||||||||||    
T  9331970 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaatgttacatatttaatataaaaaa 9332069  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||| |||||||| |||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  9332070 cacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 9332139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 3562047 - 3561878
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||| |||||||| ||| ||||||| |||||||| | ||||||||||||||||||    
T  3562047 aacatgtgcaatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaatcaataattattgattaaaagctacatatttaatataaaaaa 3561948  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| |||||||| ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  3561947 cacaagttttaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 3561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 12086100 - 12085931
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||| ||||||||||||||||||  ||||||||||||||| ||||  ||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  12086100 aacatgtgtaatattgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaatcaacaattatttattaaaagttaaatatttaatataaaaaa 12086001  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||| ||||||||||||||  |||||||||||||| |   |||||||||||||||||||||||||    
T  12086000 cacaagtttcaagtcaaaattacttatttaaacttcttattatgtgcaaatttgcacatgatagaaaaac 12085931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 47120363 - 47120228
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  47120363 aacatgtgcaatattgcacatgttatggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaa 47120264  T
Q  101 tacaaattttaagtcaaaattactactttaaacttc 136  Q
     |||| ||  |||||||| |||||| ||||||||||    
T  47120263 cacaagttccaagtcaaagttactaatttaaacttc 47120228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 7170011 - 7170180
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||  |||||||| |||||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||     
T  7170011 aacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaat 7170109  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  7170110 gcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 7170180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 24463124 - 24462958
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaa 99  Q
    |||||||| |||||| |||||||||||  |||||||||||||||||| ||||||||||| ||||| ||||||||||||   | ||||||||||||||||     
T  24463124 aacatgtgaaatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaac-aacaagtatttattaaaaaactacatatttaatataaaat 24463026  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaa 167  Q
     |||||| ||||||||||| ||| || ||||||||||||| ||   ||||||||||||||||||||||    
T  24463025 gtacaaactttaagtcaaagttattattttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24462958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 172
Target Start/End: Complemental strand, 384574 - 384429
Alignment:
Q  26 agataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattacta 125  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||| |||||||| | |||||||||||||||||| |||| ||  |||| ||| ||||||    
T  384574 agataactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaaaacaagttccaagttaaagttacta 384475  T
Q  126 ctttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
    |||||||||||||| ||   ||||||||||| |||||||||||||||    
T  384474 ctttaaacttcttaacatgtgcaaatttgca-atgatagaaaaactc 384429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 23982925 - 23982755
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||||||||||  ||||||||||  ||||||||||||||| |||| ||| |||||||||||||| ||||| |||| ||  |||||||||||||||     
T  23982925 aacatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaacttaaatatttaatataaaat 23982826  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | |||| ||  |||||||| ||||||||||||| |||||| |    |||||||||||||||||||||||||    
T  23982825 acacaagttccaagtcaaagttactactttaaatttcttaacgtgtgcaaatttgcacatgatagaaaaac 23982755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24250322 - 24250417
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataa 96  Q
    |||||||||||||||||||||||||||  ||||||||||| ||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||    
T  24250322 aacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataa 24250417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 47457631 - 47457461
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaatt-ttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaa 98  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||  |||||||||||| ||||||| | || || ||||||||||    
T  47457631 aacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaa-taacaattatttatttaaaagctacacatataatataaaa 47457533  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
       | |||||  |||||||| ||||||||||||| || ||| ||   |||||||||||||||||||||||||    
T  47457532 tgcataaattccaagtcaaagttactactttaaattttttaacatgtgcaaatttgcacatgatagaaaaac 47457461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 45501467 - 45501640
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| |||||||| |||||||| ||||| || |||| ||||||||||||||| || ||||  ||||||||||| |||     
T  45501467 aacatgtgcaacattgcacatgttaaaataactaatagtagtaactttttcttaaaaaacaacaattatttattcaacagttttatatttaatattaaat 45501566  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 173  Q
     ||||| ||  ||  ||||||| ||| |||||||||||||  |   ||||||||||||||||||||||||||||    
T  45501567 gtacaagttccaatacaaaatttctattttaaacttcttaagatgtgcaaatttgcacatgatagaaaaactct 45501640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 37 - 168
Target Start/End: Complemental strand, 18102364 - 18102232
Alignment:
Q  37 agtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataa-aaaatacaaattttaagtcaaaattactactttaaactt 135  Q
    ||||||||||||| |||||||| ||||||||||| |||||| ||| |||||||||||||| |||| |||| ||| |||||||| ||| || |||||||||    
T  18102364 agtagtaatttttcattgaaaatcaacaattattgattaaatgttacatatttaatataaaaaaacacaagtttcaagtcaaagttattaatttaaactt 18102265  T
Q  136 cttatcacaagcaaatttgcacatgatagaaaa 168  Q
    |||| ||   |||||||||||||||||||||||    
T  18102264 cttaacatgtgcaaatttgcacatgatagaaaa 18102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 25709569 - 25709398
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||| |||||||||||||||||   |||||||||||||||||||||||||| || ||||||| ||||||| ||||| | | |||||||||| |||     
T  25709569 aacatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacctatttaatatgaaat 25709470  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaact 171  Q
      |||| ||  ||  |||| |||||| ||||||||||||| ||   ||||||||||||||||||||||||||    
T  25709469 gaacaagttccaatacaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaact 25709398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 33342997 - 33343166
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  33342997 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 33343095  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  33343096 gttcaagttccaatacaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 33343166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 19868122 - 19868245
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttat-taaaagttgcatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| || |||||||||||  |||||||  |||||||||||||||     
T  19868122 aacatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagttatatatttaatataaaat 19868221  T
Q  100 atacaaattttaagtcaaaattac 123  Q
    | |||| ||| ||| |||| ||||    
T  19868222 acacaagtttcaagacaaacttac 19868245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 46290019 - 46290188
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  46290019 aacatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 46290117  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  46290118 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 46290188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 4969781 - 4969965
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||  ||||| ||| ||| | | ||||||||||| |||||||  ||||||||||| |||     
T  4969781 aacatgtgcaacattgcacatgttaaaacaactaatagtagtagctttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 4969880  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattattaatca 184  Q
     ||||| ||  ||  ||||||| ||| ||||||||||||| ||   ||||||||||||||||||||||||| ||| || ||||||    
T  4969881 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctaatactaatca 4969965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 39869131 - 39869271
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttg-catatttaatataaaaa 99  Q
    ||||| ||||||||||||||||||||   |||||||| |||||| |||| |||||||||||||||||| ||||||||| ||  |||||||||||||||      
T  39869131 aacatatgcaatattgcacatgttaaagaaactaaaaatagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatataaatg 39869230  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatca 142  Q
      |||| ||| |||||||| ||||||||||| |||||||||||    
T  39869231 c-acaagtttcaagtcaaa-ttactactttacacttcttatca 39869271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 24699146 - 24699240
Alignment:
Q  3 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatta-aaagttgcatatttaatataaa 97  Q
    |||| |||||||||||||||||||||  ||||||| |||||| |||| |||||||| |||||||||||||||| |||||| |||||||||||||||    
T  24699146 catgagcaatattgcacatgttaagactactaaaa-tagtaacttttcattgaaaaacaacaattatttattataaagttacatatttaatataaa 24699240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 42750297 - 42750459
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||||||||||||| |||||||   |||||||| || ||| ||||||||||||| ||| ||||||||||| ||||||| ||  ||||||||  |||    
T  42750297 aacatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattgaaaa-caataattatttattaaaaagttacaattttaatat--aaa 42750393  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    || ||||    ||||||||  ||||||||||||||||||| || | ||||||||||| |||||||||||    
T  42750394 atgcaaa---aaagtcaaagctactactttaaacttcttaacatatgcaaatttgcatatgatagaaaa 42750459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 32117823 - 32117992
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||||  ||||||| |||| || |||  |||| ||| || ||||||||  | |||||||   ||||||||||| || |    
T  32117823 aacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctatttaatatagaata 32117922  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||| ||| |||  ||| || | |||||||| |||||| ||   |||||||||||||||||||||||||    
T  32117923 tacaagtttcaagataaacttgccactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 32117992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 34270274 - 34270439
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||    || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  34270274 aacatgtgcaatattgcacatgttaaggtaactaaaag----aagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 34270368  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  34270369 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 34270439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 7899617 - 7899487
Alignment:
Q  40 agtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 138  Q
    |||||||||| |||||||| || |||| ||||||||||| |||  ||||||||||||||| |||||| || |||| |||| |||| | |||||| || ||    
T  7899617 agtaatttttcattgaaaaacaccaataatttattaaaatgttatatatttaatataaaatatacaagttataagacaaacttaccattttaaatttttt 7899518  T
Q  139 atcacaagcaaatttgcacatgatagaaaaa 169  Q
    | ||   ||||||||||||||||||||||||    
T  7899517 aacatgtgcaaatttgcacatgatagaaaaa 7899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 29692710 - 29692533
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||  |||||||||||||| | |||||| | || ||||||||| ||| ||| ||||||||||||||| |||||||  ||  || |||| ||      
T  29692710 aacatgtgcatcattgcacatgttaaaacaactaataatattaattttttcttggaaaacaacaattatttattcaaaagttttatccttgatattaatt 29692611  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctatta 177  Q
     | ||| ||||||  | ||||| ||| ||||||||||||| ||    |||||||||||||||||||||||||||||||    
T  29692610 gtgcaagttttaataccaaatttctattttaaacttcttaacatgtacaaatttgcacatgatagaaaaactctatta 29692533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 8170593 - 8170697
Alignment:
Q  64 aattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgata 163  Q
    ||||||| ||||||||||  ||||||||||||||||||| || |||||||| ||| |||||||||||||||| ||| ||   | ||||||| ||||||||    
T  8170593 aattattgattaaaagttatatatttaatataaaaaataaaagttttaagttaaagttactactttaaactttttaacatgtgtaaatttgtacatgata 8170692  T
Q  164 gaaaa 168  Q
     ||||    
T  8170693 aaaaa 8170697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 12650831 - 12650906
Alignment:
Q  3 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||| ||||||||||  |||||||| |||||| |||| ||||||||| | ||||||||||||||||    
T  12650831 catgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaa 12650906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 8091470 - 8091312
Alignment:
Q  13 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaatttta 111  Q
    ||||||||||| ||   |||||||||||| || ||||||||||||| ||| ||||||||||| |||||||  |||||||| | ||||  || || ||  |    
T  8091470 attgcacatgtcaaagcaactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagttatatatttaacacaaaatgtaaaagttaca 8091371  T
Q  112 agtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |  |||| |||||| ||||||||||||| ||   | |||||||||||||||||||||||    
T  8091370 atgcaaagttactattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 8091312  T

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Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 26300581 - 26300751
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||| ||||||||| ||||||| | ||||||||||| ||||| | |||||||||  || ||  | ||||| |||||||  | |||||||| ||||     
T  26300581 aacatgtgtaatattgcatatgttaaaacaactaaaagtattaattctgtattgaaaa--aaaaaaaaattattaaaaagttatacatttaatacaaaat 26300678  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
    |||||| ||| || ||||| |||||| ||||||||| ||| ||   ||||||||| ||||||| |||||||||    
T  26300679 atacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaatttgtacatgatggaaaaactc 26300751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 41331543 - 41331458
Alignment:
Q  83 catatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    ||||||||||||||||   |||| ||  |||||||| ||||||||||||| |||||||||   |||||||||||||||||||||||    
T  41331543 catatttaatataaaatgcacaagttccaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaa 41331458  T

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Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 12624649 - 12624783
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaata 102  Q
    ||||||||||||  |||| ||||| ||||||||| |||| |||||||||||||||  | |||||||||||| |||| ||| ||||||||||||||| | |    
T  12624649 atgtgcaatattatacatattaaggtaactaaaa-tagttattttttattgaaaaatatcaattatttattaaaaacttgtatatttaatataaaataca 12624747  T
Q  103 caaattttaagtcaaaattactactttaaacttctta 139  Q
    | || |||||| |||| |||| | |||||| ||||||    
T  12624748 c-aagtttaagacaaacttaccattttaaatttctta 12624783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39475856 - 39475927
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattattt 71  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| |||||| ||||||| ||||||||||||    
T  39475856 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttttttgaaaaacaacaattattt 39475927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 7040421 - 7040252
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatat-ttaatataaaaa 99  Q
    ||||| ||||| |||||| |||||||  ||||||||||  | || | ||||||| ||| ||||||||||||||||||| ||  |||| |||||| ||||     
T  7040421 aacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatt-tatatattaatagaaaat 7040323  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | |||| ||  || |||||  || |||||||||||||||| ||   |||||||||||||||||| ||||||    
T  7040322 acacaagttccaaatcaaacatagtactttaaacttcttaacatgtgcaaatttgcacatgatataaaaac 7040252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 44806945 - 44807019
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||| |||||||||||| |  ||||||||||| ||||| | |||||| ||| |||||||||||||||    
T  44806945 atgtgcaatattacacatgttaagacatttaaaagtagtattttttcactgaaaaacaataattatttattaaaa 44807019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 24250617 - 24250678
Alignment:
Q  111 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
    |||||||| |||||||||||||||||||||||    ||||||| ||||||||||||||||||    
T  24250617 aagtcaaagttactactttaaacttcttatcatgttcaaatttccacatgatagaaaaactc 24250678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 31066894 - 31066829
Alignment:
Q  13 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||||||||    
T  31066894 attgcacatgttaaaataagtaaaagtagtaactttttattaaaaaacaagaactatttattaaaa 31066829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38554246 - 38554323
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||| |||||||  |||||||||  ||||||||| | |||| ||||||||||||| |||||||||| ||||||||    
T  38554246 aacatgtacaatattatacatgttaaactaactaaaaatcgtaaatttttattgaaaaacaacaattatatattaaaa 38554323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 47708008 - 47707915
Alignment:
Q  47 ttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctta 139  Q
    |||||| ||||| ||||||||||||||||||| |||  |||||||||| ||||  || || ||| || |||||||||||| |||||||||||||    
T  47708008 ttttatggaaaaacaacaattatttattaaaaagttatatatttaatacaaaatgtataagtttcaattcaaaattactattttaaacttctta 47707915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 22334080 - 22334020
Alignment:
Q  111 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaact 171  Q
    |||||||| |||||||||||||||||||| ||    |||||||||||||||| ||||||||    
T  22334080 aagtcaaagttactactttaaacttcttaacatgtacaaatttgcacatgattgaaaaact 22334020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 27300438 - 27300534
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaa 98  Q
    ||||||||||||||| |||||||     ||||||||||||| |||||||||||||| ||  || |||||||||||| | | ||||||||||||||||    
T  27300438 atgtgcaatattgcatatgttaaatcttctaaaagtagtaatttttttattgaaaaacattaactatttattaaaaatctacatatttaatataaaa 27300534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 8420959 - 8420905
Alignment:
Q  45 ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    ||||||||| |||| || |||||||||||| |||||||| |||||||||||||||    
T  8420959 ttttttattaaaaagcatcaattatttattaaaaagttgtatatttaatataaaa 8420905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 11680144 - 11680090
Alignment:
Q  45 ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    ||||| |||||||| ||||||||||||||| |||||||  |||||||||||||||    
T  11680144 tttttaattgaaaaacaacaattatttattaaaaagttatatatttaatataaaa 11680090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 24639551 - 24639644
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatat 94  Q
    |||||||||||||| |||||||||||  ||| ||||| | | | ||||||||||| || ||||||||||| ||||||| | | ||||||||||||    
T  24639551 aacatgtgcaatat-gcacatgttaaagtaattaaaaatggaatttttttattgacaaacaacaattattcattaaaaatatacatatttaatat 24639644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 47200922 - 47201019
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaag-ttgcatatttaatataaaa 98  Q
    |||||||  ||| |||||| ||||||   |||| ||||||| ||||||||||||||||  || |||||||||||||||| ||  |||||||||||||||    
T  47200922 aacatgtaaaatgttgcacgtgttaaataaactcaaagtagcaattttttattgaaaa-taaaaattatttattaaaagattatatatttaatataaaa 47201019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4161890 - 4161939
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaatttttt 50  Q
    |||||||| |||||||||||||||||   ||||||||||||||| |||||    
T  4161890 aacatgtgtaatattgcacatgttaaaggaactaaaagtagtaacttttt 4161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 26037216 - 26037269
Alignment:
Q  115 caaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||    
T  26037216 caaaatttctattttaaacttcttaacatctgcaaatttgcacatgatagaaaa 26037269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 29398189 - 29398132
Alignment:
Q  115 caaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
    ||||||| ||| ||||||||||||| ||   ||||||||| |||||||||||||||||    
T  29398189 caaaatttctattttaaacttcttaacatgtgcaaatttgaacatgatagaaaaactc 29398132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29398284 - 29398227
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 58  Q
    ||||||||||| |||||||||||||| | |||||| | || |||||||| ||||||||    
T  29398284 aacatgtgcaacattgcacatgttaaaacaactaataatactaatttttcattgaaaa 29398227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 3530242 - 3530207
Alignment:
Q  42 taattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||||||| ||||||||||||||||||    
T  3530242 taattttttattgaaaac-aacaattatttattaaaa 3530207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 5833424 - 5833532
Alignment:
Q  62 acaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatg 160  Q
    |||| |||||||||||| | | ||||||||||||| ||   |||| || |||| | || ||||| |||||||||| ||| ||   |||||||||||||||    
T  5833424 acaactatttattaaaaagctacatatttaatatagaatgcacaagttctaagacgaagttactgctttaaactttttaacatgtgcaaatttgcacatg 5833523  T
Q  161 atagaaaaa 169  Q
    |||||||||    
T  5833524 atagaaaaa 5833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 16800609 - 16800557
Alignment:
Q  46 tttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaa 98  Q
    ||||||||||||| ||||||||||||||||||  ||  |||||||||| ||||    
T  16800609 tttttattgaaaaacaacaattatttattaaattttttatatttaatacaaaa 16800557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 27665213 - 27665044
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27665213 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 27665114  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  27665113 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 27665044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 16126728 - 16126559
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  16126728 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 16126629  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||| |||| ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  16126628 cacaagtttcaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 16126559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 14377433 - 14377600
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||| ||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  14377433 aacacgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgttaaaagttacatatttaatataaaaaa 14377532  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
     |||| ||| |||||||| |||||||||||||||||||||||    ||||||||||||||||||||||    
T  14377533 cacaagtttcaagtcaaagttactactttaaacttcttatcatgtacaaatttgcacatgatagaaaa 14377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 12016675 - 12016844
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  12016675 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 12016774  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||  |||| ||||||||||||||||||||||||  |   |||||||||||||||||||||||||    
T  12016775 cacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaac 12016844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 16919323 - 16919151
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  16919323 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattgattaaaagttacatatttaatataaaaaa 16919224  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 173  Q
     |||| ||| |||||||| |||||||||||||||| |||  |   |||||||||||||||||||| |||||||    
T  16919223 cacaagtttcaagtcaaagttactactttaaacttgttaatatgtgcaaatttgcacatgatagataaactct 16919151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 19228434 - 19228601
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  19228434 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaa 19228533  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
     |||| ||  |||||||| |||||||||||||||||||| ||   |||||||||||||||||||||||    
T  19228534 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 19228601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 26230022 - 26229885
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  26230022 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttatt-aaaaccaacaattattgattaaaagttacatatttaatataaaaaa 26229924  T
Q  101 tacaaattttaagtcaaaattactactttaaacttctta 139  Q
    || ||||||||||||||| |||||| |||||||||||||    
T  26229923 tataaattttaagtcaaagttactattttaaacttctta 26229885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 22705463 - 22705601
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  22705463 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattaatttaaagttacatatttaatataaaaaa 22705562  T
Q  101 tacaaattttaagtcaaaattactactttaaacttctta 139  Q
     |||| ||| |||| ||||||||||||||||||||||||    
T  22705563 cacaagtttcaagttaaaattactactttaaacttctta 22705601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 13351378 - 13351242
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaatttttt-attgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaata 102  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||| |||||||||| |||||| ||||||||||| |    
T  13351378 atgtgcaatattgcacatgttaaggtaactaaaagtagttatttttttattgaaaatcaacaattattaattaaaagttacatattaaatataaaaaaca 13351279  T
Q  103 caaattttaagtcaaaattactactttaaacttctta 139  Q
    ||| || ||||||||| ||||||||||||||||||||    
T  13351278 caagttctaagtcaaagttactactttaaacttctta 13351242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 16123291 - 16123455
Alignment:
Q  5 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaataca 104  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||| ||||||| || |||||| ||| |||||||||||||||||| |||    
T  16123291 tgtgcaatattgcacatgttaaggtaactaaaagaagtaacttttcattgaaaacaaacaattgttgattaaatgttacatatttaatataaaaaacaca 16123390  T
Q  105 aattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    | ||   | |||||||||||| ||||||||||||||||   ||||||||||||||||||||||||    
T  16123391 agttcctaatcaaaattactaatttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 16123455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 15411792 - 15411624
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||| ||||||| ||||| | ||||||||||||||||     
T  15411792 aacatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctacatatttaatataaaat 15411693  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
      |||| ||| ||| |||| |||||| ||||||||||||| ||   ||||||||||||||| |||||||    
T  15411692 gaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaatttgcacatgttagaaaa 15411624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 8771021 - 8770887
Alignment:
Q  35 aaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaact 134  Q
    |||||||||| |||| | | ||||||||||||||||||||||||||| |||||||||||||||||| | |||||| ||||||||||||||||||||||||    
T  8771021 aaagtagtaacttttcaataaaaaccaacaattatttattaaaagttacatatttaatataaaaaacaaaaatttcaagtcaaaattactactttaaact 8770922  T
Q  135 tcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||||| ||   |||||||||||||||||| |||||    
T  8770921 tcttaacatgtgcaaatttgcacatgataaaaaaa 8770887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 4821323 - 4821454
Alignment:
Q  39 tagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 138  Q
    |||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  4821323 tagtaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacacaagtttcaaatcaaagttactactttaaacttctt 4821422  T
Q  139 atcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||   |||||||||||||| ||||||||||    
T  4821423 atcatgtgcaaatttgcacataatagaaaaac 4821454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 38185953 - 38185863
Alignment:
Q  173 tattattaatcaggtcctacacatcccatatcacatttattaaac-cccctcttttgacctccacgtgtcccaagttatgtcgttcatctc 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  38185953 tattattaatcaggtcctacacatcccatatcacatttattaaacccccctcttttgacctccacgtgtcacaagttatgtcgttcatctc 38185863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 39904217 - 39904079
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||||| | ||| ||||||||||||||    
T  39904217 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatgtttaatataaaaaa 39904118  T
Q  101 tacaaattttaagtcaaaattactactttaaacttctta 139  Q
     | || ||  |||| ||| ||||||||||||||||||||    
T  39904117 cataagttccaagttaaatttactactttaaacttctta 39904079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 10690791 - 10690915
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||||||||||    
T  10690791 aacatgtgcaatattgcacatgttaagttaactaaaattagtaatttttcattaaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 10690890  T
Q  101 tacaaattttaagtcaaaattacta 125  Q
     | || ||| || | ||||||||||    
T  10690891 cataagtttcaaattaaaattacta 10690915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 9747325 - 9747495
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttat-taaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||| | ||||||||||  |||||||||||||||| | ||||||||||| |||||| ||||| |  ||||| | ||||||||||||||||     
T  9747325 aacatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctacatatttaatataaaat 9747424  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  ||| ||||||||||| ||||||||||||| ||   | |||||||||||||||||||||||    
T  9747425 gaacaagttccaagacaaaattactattttaaacttcttaacatgtgaaaatttgcacatgatagaaaaac 9747495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 5583727 - 5583558
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  5583727 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 5583629  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||| ||||||||||||||    
T  5583628 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcgcatgatagaaaaac 5583558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 7720123 - 7720296
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||||||| ||||||||||||||| |||||||  ||||||||||  ||      
T  7720123 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagtttaatatttaatactaagt 7720222  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 173  Q
     ||||  ||  ||  ||||||| |||  |||||||| ||| |||  ||||||||||||||||||||||||||||    
T  7720223 gtacacgttccaatacaaaatttctatcttaaactttttaacacgtgcaaatttgcacatgatagaaaaactct 7720296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 20566187 - 20566014
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||  ||||||||| ||| || | ||||||||||| |||||||||||||||||||  ||   ||||||||| ||||     
T  20566187 aacatgtgcaatattgcacatgttaaagtaactaaaaatagcaactatttattgaaaaacaacaattatttattaaaatattatctatttaataaaaaat 20566088  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 173  Q
    | |||| ||  ||  ||||  || |||||||||||||||| ||   | ||||||||||||||||||||||||||    
T  20566087 acacaagttccaatacaaacataatactttaaacttcttaacatgtgtaaatttgcacatgatagaaaaactct 20566014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 15231883 - 15232011
Alignment:
Q  45 ttttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcac 143  Q
    |||||||||||||| ||| | ||||||||||||| ||| |||||||||||| |||   |||| |||||||||||| |||| ||||||||||||||| ||     
T  15231883 ttttttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaatgcacaagttttaagtcaaagttaccactttaaacttcttaacat 15231982  T
Q  144 aagcaaatttgcacatgatagaaaaactc 172  Q
      |||||||||||||| ||||||||||||    
T  15231983 gtgcaaatttgcacataatagaaaaactc 15232011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 43806368 - 43806538
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | || ||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||     
T  43806368 aacatgtgcaacattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 43806467  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||| ||  ||||||| ||| ||||||||| ||| ||   |||||||| |||| |||||||||||    
T  43806468 gtacaagtttcaatacaaaatttctattttaaactttttaacatgtgcaaatttacacacgatagaaaaac 43806538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 23932573 - 23932746
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||   |||||||| |||||| |||  ||||||||  |||||||||||||| |||||||  ||| |||||||||||     
T  23932573 aacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaat 23932672  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 173  Q
      |||| ||   |  |||  |||||| |||||||||||||  | | ||||||||||||||||||||||||||||    
T  23932673 gcacaagttccgatacaattttactattttaaacttcttaatatatgcaaatttgcacatgatagaaaaactct 23932746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 2060183 - 2060044
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaa-agttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 128  Q
    ||||||||||| ||| |||| ||| |||| |||||||||||||||||| || | |||||||||||||||| | |||||||  |||| ||| |||||||||    
T  2060183 aactaaaagtaataacttttcattaaaaatcaacaattatttattaaagagctacatatttaatataaaagacacaaattccaagttaaagttactactt 2060084  T
Q  129 taaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    |||| |||||| ||   | |||||||||||| ||||||||    
T  2060083 taaatttcttaacatgtgtaaatttgcacatcatagaaaa 2060044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 36612901 - 36612762
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| ||||| |||||||| |||||||| |||||||| ||||| ||| ||| ||||| ||||||||| |||||||  ||||||||||| |||     
T  36612901 aacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagttttatatttaatattaaat 36612802  T
Q  100 atacaaattttaagtcaaaattactactttaaacttctta 139  Q
     ||||| ||||||  |||||||  || |||||||||||||    
T  36612801 gtacaagttttaatacaaaatttttattttaaacttctta 36612762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 36620752 - 36620613
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| ||||| |||||||| |||||||| |||||||| ||||| ||| ||| ||||| ||||||||| |||||||  ||||||||||| |||     
T  36620752 aacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagttttatatttaatattaaat 36620653  T
Q  100 atacaaattttaagtcaaaattactactttaaacttctta 139  Q
     ||||| ||||||  |||||||  || |||||||||||||    
T  36620652 gtacaagttttaatacaaaatttttattttaaacttctta 36620613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 43388933 - 43388859
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||||||| ||||   |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  43388933 atgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaa 43388859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 7757955 - 7757781
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||| |||||||||| ||||||||||||  || |||||||| ||||||||||||||||| |  |||||||  |||||||||| ||||     
T  7757955 aacatgtgcaaaattgtacatgttaaggtaactaaaagtaacaagtttttatt-aaaaccaacaattatttaacaaaaagttatatatttaatacaaaat 7757857  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctat 175  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   | ||||||||||||||||||||||| ||||    
T  7757856 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgtaaatttgcacatgatagaaaaaccctat 7757781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 9450265 - 9450435
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||| ||||  ||  ||||| ||  || | ||||||||||| ||||||||||||||| |||| ||  |||||||||| ||||     
T  9450265 aacatgtgcaatattgcacatcttaaagtagttaaaaataaaaactatttattgaaaaacaacaattatttattaaaaaattatatatttaatagaaaat 9450364  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | |||||||  ||  ||||  |||||||||||| |||||| ||   ||| |||||||||||||||||||||    
T  9450365 acacaaattccaatacaaacatactactttaaatttcttaacatgtgcagatttgcacatgatagaaaaac 9450435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 24729719 - 24729577
Alignment:
Q  29 taactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactact 127  Q
    ||||||||| |||||| |||||||||||||  || ||||||||||||||| |||   || |||||| |||| |||||||||  ||  |||| |||||| |    
T  24729719 taactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagttatgtaattaatacaaaatatacaaattccaatgcaaagttactatt 24729620  T
Q  128 ttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||| |||||| ||   |||||||||||||||||||||||||    
T  24729619 ttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 24729577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 25998172 - 25998002
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||||| |||||||||||||||  |||||||||||   || ||||||||||||| ||||||||||||||| ||||| | |||||||| ||| |||     
T  25998172 aacatgtgcattattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaagatacatatttattattaaat 25998073  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  ||  |||||||| |  |||||  || ||| |||| |||||||||||| ||||||||||||    
T  25998072 gaacaagttccaatgcaaaattaattttttaatttttttaacacatgcaaatttgcacgtgatagaaaaac 25998002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 22162237 - 22162149
Alignment:
Q  10 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaa 98  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||| ||||||||||||| ||||||||| | | |||| |||||||||||    
T  22162237 aatattgcacatgttaaggcaactaaaagtagtaactttttattg-aaaccaacaattaattattaaaaatctacatagttaatataaaa 22162149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 12438817 - 12438723
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataa 96  Q
    |||||||||||||||||| ||||| ||| |||||||| || ||| |||| ||| ||||||||||||||||||||||||  |  |||||||||||||    
T  12438817 aacatgtgcaatattgcatatgttcagacaactaaaaataataacttttcatt-aaaaccaacaattatttattaaaaactatatatttaatataa 12438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 34214121 - 34213943
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaatta-tttattaaaagttgcata--tttaatataaa 97  Q
    |||||||  |||| ||||||||||||   |||||||| |||||| ||||||||||||||||||||||| ||||| |||||||  |||  ||||||| |||    
T  34214121 aacatgtataatactgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattattttataaaaagttatatatttttaataaaaa 34214022  T
Q  98 aaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctatt 176  Q
    |  | ||| ||  ||   |||||||||| |||||| |||||| ||   ||||||||||||| |||||||||| ||||||    
T  34214021 atgttcaagttccaatgaaaaattactattttaaatttcttaacatgtgcaaatttgcacacgatagaaaaattctatt 34213943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 16493691 - 16493530
Alignment:
Q  14 ttgcacatgttaagataactaaaagtagt-aat-tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaatttt 110  Q
    |||||||||||||   || |||||||||| ||| ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || ||||||     
T  16493691 ttgcacatgttaaagcaattaaaagtagttaatgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 16493592  T
Q  111 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
    ||  ||||||| | | | ||||||||||| ||   |||||||||||||||||||||||||||    
T  16493591 aatgcaaaatttcaattataaacttcttaacatgtgcaaatttgcacatgatagaaaaactc 16493530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 170
Target Start/End: Complemental strand, 38248579 - 38248420
Alignment:
Q  10 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaatacaaatt 108  Q
    |||||||||||||||||| ||||||||| ||| || |||||||| ||||||||||||||||| |  |||| ||  |||||||||| ||||  | ||| ||    
T  38248579 aatattgcacatgttaaggtaactaaaa-tagcaagtttttatt-aaaaccaacaattatttaacaaaaaattatatatttaatacaaaatgttcaagtt 38248482  T
Q  109 ttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      ||   |||||||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  38248481 ccaatgtaaaattactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 38248420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 5853588 - 5853461
Alignment:
Q  46 tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcaca 144  Q
    ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || |||||| ||  ||||||| | | | ||||||||||| ||      
T  5853588 tttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatg 5853489  T
Q  145 agcaaatttgcacatgatagaaaaactc 172  Q
     |||||||||||||||||||||||||||    
T  5853488 tgcaaatttgcacatgatagaaaaactc 5853461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 45062207 - 45062378
Alignment:
Q  2 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaa 100  Q
    |||||| |||||||  | ||||||| | || ||||||| |||| |||||||| |||| ||| ||||||||||| ||||||| ||| ||||||||||||      
T  45062207 acatgtacaatattaaatatgttaaaacaattaaaagtggtaactttttattaaaaaacaaaaattatttattaaaaagttacatgtttaatataaaatg 45062306  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
     |||| ||  ||   ||| |||||| ||| |||||||||  |   |||||||||||||||||||||||||||    
T  45062307 cacaagttccaaaataaagttactattttgaacttcttaatatgtgcaaatttgcacatgatagaaaaactc 45062378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 12919521 - 12919351
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    ||||||||||||||||||||||||||   || |||||||| ||| ||||||||||||||  | |||| ||||||| ||||  | ||||||||||||||||    
T  12919521 aacatgtgcaatattgcacatgttaaagcaattaaaagtattaatttttttattgaaaagtagcaataatttattaaaaaactacatatttaatataaaa 12919422  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
       |||| ||| |||  ||| |||||| |||||| || ||| ||   | |||||||||||||||| |||||    
T  12919421 tgaacaagtttcaagataaagttactattttaaattttttaacatgtgtaaatttgcacatgataaaaaaa 12919351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 40562241 - 40562171
Alignment:
Q  7 tgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaa 77  Q
    |||||||||| |||||||||  ||  |||||| ||||| ||||||||||||| ||||||||||||||||||    
T  40562241 tgcaatattgtacatgttaaagtagttaaaagcagtaagtttttattgaaaatcaacaattatttattaaa 40562171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 41492292 - 41492131
Alignment:
Q  10 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattt 109  Q
    ||||||| |||| |||||  || |||||||| || ||| ||||||||||  |||||||||||   |||| || ||||||||||| ||||   |||| |||    
T  41492292 aatattgtacatattaaggaaattaaaagtaatattttattattgaaaaagaacaattattttaaaaaactt-catatttaataaaaaatgcacaagttt 41492194  T
Q  110 taagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
     |||| ||| ||| |||||||||||||||||||   ||||||||  ||||||||||| |||||    
T  41492193 caagttaaagttattactttaaacttcttatcatgtgcaaatttatacatgatagaagaactc 41492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 2051631 - 2051720
Alignment:
Q  10 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    ||||||| | ||||||| | |||||||| ||| || ||||||||||||| ||||||||||||||| |||| ||  |||||||||||||||    
T  2051631 aatattgtatatgttaaaacaactaaaattagcaagtttttattgaaaaacaacaattatttattaaaaatttaaatatttaatataaaa 2051720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 182
Target Start/End: Original strand, 29142111 - 29142264
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 128  Q
    |||||| |||||||| ||||| ||||||| ||||||||| ||||| |||| ||  ||||||||||| |||  ||||| ||  ||  ||||||| |||  |    
T  29142111 aactaatagtagtaactttttcttgaaaaacaacaattacttattcaaaaattttatatttaatattaaatgtacaagttaaaatacaaaatttctatat 29142210  T
Q  129 taaacttcttatcacaagcaaatttgcacatgatagaaaaactctattattaat 182  Q
    ||||||||| | ||   | ||||||||||||||||||||||| || ||||||||    
T  29142211 taaacttctaaacatgtgtaaatttgcacatgatagaaaaaccctgttattaat 29142264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34817552 - 34817651
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||| ||||||||||||| | |||| |||||||||| ||  || | ||||||||||| ||||||||||||||| |||||||  |||||||||| |||||    
T  34817552 aacatatgcaatattgcacgtattaaaataactaaaaatatcaactatttattgaaaa-caacaattatttattaaaaagttatatatttaataaaaaaa 34817650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 22704590 - 22704717
Alignment:
Q  46 tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcaca 144  Q
    ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || |||||| ||  ||||||| | | | |||||||||||  |      
T  22704590 tttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaagatg 22704689  T
Q  145 agcaaatttgcacatgatagaaaaactc 172  Q
     |||||||||||||||||||||||||||    
T  22704690 tgcaaatttgcacatgatagaaaaactc 22704717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 26003431 - 26003348
Alignment:
Q  85 tatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    |||||||||| |||  ||||||||| ||  ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||    
T  26003431 tatttaatatcaaatgtacaaatttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 26003348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 170
Target Start/End: Complemental strand, 4576423 - 4576326
Alignment:
Q  73 ttaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||||||  ||||||||||| |||  ||||| ||| ||  ||||||| ||| |||||| |||||| || | || ||||||||||||||||||||||    
T  4576423 ttaaaagttttatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaatttcttaacatatgcgaatttgcacatgatagaaaaac 4576326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4579958 - 4579889
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatt 70  Q
    ||||||||||||||| |||||||||||  |||||||  |||||| |||| |||||||| || ||||||||    
T  4579958 aacatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaaaacaccaattatt 4579889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 37471912 - 37471771
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagat-aactaaaagtagtaatttttt-attgaaaaccaacaattatttattaaaagt-tgcatatttaatataaa 97  Q
    ||||| || ||||||||||||||| | |  |||||||| ||||| |||||| |||||||  ||||||| |||||||||||   | |||||||||||||||    
T  37471912 aacatttgtaatattgcacatgtttaaagcaactaaaaatagtattttttttattgaaagacaacaataatttattaaaaaactacatatttaatataaa 37471813  T
Q  98 aaatacaaattttaagtcaaaattactactttaaacttctta 139  Q
    |   |||| ||| ||| |||| |||||| |||||||||||||    
T  37471812 atgaacaagtttcaagacaaagttactattttaaacttctta 37471771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 6109523 - 6109575
Alignment:
Q  126 ctttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattat 178  Q
    |||||||||||||| ||   ||||||||||||||||||||||||| |||||||    
T  6109523 ctttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctattat 6109575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 40503151 - 40503080
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 72  Q
    ||||| ||||||||  ||||| |||| | || ||||||||  || |||||||||||||||||||||||||||    
T  40503151 aacatatgcaatatcacacatattaaaacaattaaaagtaacaagtttttattgaaaaccaacaattattta 40503080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 8065247 - 8065301
Alignment:
Q  116 aaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  8065247 aaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 8065301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 15749336 - 15749278
Alignment:
Q  37 agtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatat 94  Q
    |||||||||||||| ||||||| ||||||||||||||| |||| ||  |||||||||||    
T  15749336 agtagtaattttttcttgaaaaacaacaattatttattcaaaaattttatatttaatat 15749278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 21470877 - 21470831
Alignment:
Q  3 catgtgcaatattgcacatgttaagataactaaaagtagtaattttt 49  Q
    ||||||||||||||||||| |||| | |||||||||||||| |||||    
T  21470877 catgtgcaatattgcacatattaaaagaactaaaagtagtatttttt 21470831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26003661 - 26003603
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaac 59  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| | ||||||    
T  26003661 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttttggaaaac 26003603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 14285435 - 14285371
Alignment:
Q  10 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatta 75  Q
    ||||||||| |||||||  ||| ||||||||| |||||||||||||||   |||||||||||||||    
T  14285435 aatattgcagatgttaaagtaa-taaaagtagaaattttttattgaaataaaacaattatttatta 14285371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16754979 - 16755052
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 74  Q
    ||||||||||| |||||| ||||||| | |||||| |||||||| ||||| ||| ||| ||||| |||| ||||    
T  16754979 aacatgtgcaacattgcaaatgttaaaacaactaatagtagtaacttttttttggaaaacaacatttatatatt 16755052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 38327861 - 38327893
Alignment:
Q  46 tttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||| |||||||||||||||||||    
T  38327861 tttttattgaaaatcaacaattatttattaaaa 38327893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 9e-58; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 11610923 - 11611088
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11610923 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 11611022  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaa 166  Q
     |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||    
T  11611023 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaa 11611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 20938065 - 20938237
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatat-aaaaa 99  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||| ||||||| || |||||||||||| |||||    
T  20938065 aacatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaattacatatttaatataaaaaa 20938164  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
    | |||| ||  |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  20938165 acacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaactc 20938237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 13495302 - 13495472
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||||||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||  | ||||||||||||||||     
T  13495302 aacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctacatatttaatataaaat 13495401  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  ||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||    
T  13495402 gcacaagttccaagtcaaaattactactttaaacttcttatcatgtgcaaattttcacatgatagaaaaac 13495472  T

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Target: chr3; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 16875175 - 16875025
Alignment:
Q  20 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaa 119  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| | |||||||||||||||||| |||| ||| |||| |||     
T  16875175 atgttaaggtaactaaaagtagtaattttttattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaag 16875076  T
Q  120 ttactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||||||||||||||||| ||   ||||||||||||| |||||||||||    
T  16875075 ttactactttaaacttcttaacatgtgcaaatttgcacacgatagaaaaac 16875025  T

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Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 3863338 - 3863507
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||| |||||||| || |||||||| |||||||| | ||||||||||||||||||    
T  3863338 aacatgtgcaatattgcacatgttaaggtaactaaaggtagtaacttttcattgaaaatcagcaattattgattaaaagctacatatttaatataaaaaa 3863437  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||  |||  ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  3863438 cacaagttccaagctaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 3863507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 38389455 - 38389625
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | |||||||||||| |||     
T  38389455 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 38389554  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  ||||||||||||| ||||||||||||||| ||   |||||||||||||||||||||||||    
T  38389555 gcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 38389625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 50364199 - 50364337
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||| |||||||||||| ||| |||||||||||||||| || | |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  50364199 aacatgtgcagtattgcacatgtaaaggtaactaaaagtagtaacttataattgaaaaccaacaattattgattaaaagttacatatttaatataaaaaa 50364298  T
Q  101 tacaaattttaagtcaaaattactactttaaacttctta 139  Q
     |||| ||  |||||||| ||||||||||||||||||||    
T  50364299 cacaagttccaagtcaaagttactactttaaacttctta 50364337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 51339353 - 51339242
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||||||| | | ||||||||||||||||    
T  51339353 aacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttcattgaaaaccaacaattattgattaaaagctacgtatttaatataaaaaa 51339254  T
Q  101 tacaaattttaa 112  Q
     ||||| |||||    
T  51339253 cacaaactttaa 51339242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 54621387 - 54621256
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||||||| ||| |||||||||||||||| |||||| ||| ||||||||||||||||||    
T  54621387 aacatgtgcaatattgcatatgttaaggtaattaaaagtagtaatttttcattaaaaaccaacaattattgattaaatgttacatatttaatataaaaaa 54621288  T
Q  101 tacaaattttaagtcaaaattactactttaaa 132  Q
     |||| ||  |||||||| |||||| ||||||    
T  54621287 cacaacttccaagtcaaagttactaatttaaa 54621256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 46492510 - 46492339
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaa-aagttgcatatttaatataaaaaata 102  Q
    |||||||||||||||||||||||   |||||||||| |||| ||||||||||||| |||||||||||||||||  ||||  |||||||||| ||||  ||    
T  46492510 atgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagttatatatttaatacaaaatgta 46492411  T
Q  103 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactcta 174  Q
    ||| ||| ||  |||| ||||||||||||| |||||| |    | |||||||||||||||||||||||||||    
T  46492410 caagtttcaatgcaaagttactactttaaatttcttaacgtgtgaaaatttgcacatgatagaaaaactcta 46492339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 32553375 - 32553544
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||| |||| |||||||| ||| |||||||  |||||  || ||||||||||||||||||    
T  32553375 aacatgtgcaatattacacatgttaaggtaattaaaagtagtaacttttcattgaaaatcaataattattagttaaatattacatatttaatataaaaaa 32553474  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||| || | ||| ||| || ||||||||||||| ||   | |||||| ||||||||||||||||    
T  32553475 cacaagtttcaaattaaagttattaatttaaacttcttaacatgtgtaaatttacacatgatagaaaaac 32553544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 40497073 - 40497224
Alignment:
Q  18 acatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtca 116  Q
    ||||||||||  ||||||||||||||| |||||||||||| | |||||||| ||||||||| | | |||| |||||||||||   |||| || ||||| |    
T  40497073 acatgttaaggcaactaaaagtagtaactttttattgaaatc-aacaattaattattaaaaatctacatagttaatataaaatgcacaagttctaagtta 40497171  T
Q  117 aaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    || |||||||||||||||||||||||   ||||||||||||||||||||||||    
T  40497172 aagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 40497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 29686367 - 29686498
Alignment:
Q  39 tagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 138  Q
    |||||| |||| | |||| | |||||||||||||||||||| |  |||| |||||||||||| |||| || ||||| ||| |||||||||||||||||||    
T  29686367 tagtaacttttcactgaatatcaacaattatttattaaaagctatatatgtaatataaaaaacacaagttctaagttaaagttactactttaaacttctt 29686466  T
Q  139 atcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||   |||||||||||||||||||||||||    
T  29686467 atcatgtgcaaatttgcacatgatagaaaaac 29686498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 2571277 - 2571446
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  2571277 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 2571375  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  2571376 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 2571446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 51618058 - 51618231
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| | ||||||||| || || |||||| |||||| |||||||||||||||||||  |  |||||||||| ||||      
T  51618058 aacatgtgcaatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaa--tatatatttaatacaaaatg 51618155  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctatt 176  Q
    ||||| ||  ||  |||| |||| | || |||||||||| ||   ||||||||||||||||||||||||| |||||    
T  51618156 tacaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctatt 51618231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 36426579 - 36426409
Alignment:
Q  3 catgtgcaatattgcacatgttaagataactaaaagtagtaatt--ttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||  |||||| ||||| ||| | ||||||||| ||||| | |||||||||||| |||     
T  36426579 catgtgcaacattgcacatgttaaaatatctaaaagtagtaattttttttatcgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 36426480  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  ||||||||||||| ||||||||||||||| ||   | |||||| ||||||||||||||||    
T  36426479 gcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgtaaatttacacatgatagaaaaac 36426409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 50204411 - 50204590
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||||||||| ||| |||  ||||||||| |||| |||||||  ||||||||||| |||     
T  50204411 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttggaaaataacaattatatattcaaaagttttatatttaatattaaat 50204510  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattatt 179  Q
     ||||  ||  ||  ||||||| ||| ||||||||||||| ||   ||||||||||||||||||||||||| || |||||    
T  50204511 gtacaggttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccttttatt 50204590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 10307775 - 10307944
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    |||||||||||||||||||||| |||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  10307775 aacatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 10307873  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  10307874 gttcaagttccaatgcaaatttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 10307944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 23638219 - 23638050
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||| ||| ||||||||| || ||||||||| || |||||||| |||||||||||||||     
T  23638219 aacatgtgcaatattgtgcatgttaagttaacttaaagtagtaactttctattgaaaaacatcaattatttaataaaaagttgtatatttaatataaaat 23638120  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    | |||| ||| ||| | || |||| | |||||| |||||| ||   |||||||||| ||||||| |||||    
T  23638119 acacaagtttcaagactaacttaccattttaaatttcttaacatgtgcaaatttgctcatgatataaaaa 23638050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 54527876 - 54527707
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||     
T  54527876 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 54527777  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
     ||||| ||  ||  |||||||  || |||||| |||||| ||   |||||||||||||| |||||||||    
T  54527776 gtacaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaatttgcacataatagaaaaa 54527707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12515643 - 12515573
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 72  Q
    ||||||||||||||||||||||||||| ||||||||||||| || |||||||| ||||||||||||||||||    
T  12515643 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatt-aaaaccaacaattattta 12515573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 46845607 - 46845533
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||||||| ||||   |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  46845607 atgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaa 46845533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37444155 - 37444231
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||||||||| ||| ||||||||| |||||||||    
T  37444155 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattg-aaatcaacaattaattattaaaa 37444231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 38786463 - 38786355
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactacttt 129  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||||  | || ||||| |||||||   |||||||| || |||||||||||| |||    
T  38786463 aactaaaaatagtaattttttattgaaaat-aacaattatttattaaaaaatacacatttagtataaaatccacaaatttcaaatcaaaattactatttt 38786365  T
Q  130 aaacttctta 139  Q
    ||||||||||    
T  38786364 aaacttctta 38786355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 42180060 - 42180229
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| | | ||||||||| |||||||||  ||||||||||| |||     
T  42180060 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 42180159  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
     ||||| ||  ||  |||||||  || ||||||||||||| ||   |||||||| |||||||||||||||    
T  42180160 gtacaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 42180229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 171
Target Start/End: Original strand, 24978693 - 24978825
Alignment:
Q  39 tagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 138  Q
    |||||| |||||||||| |||||| ||||||| ||||||| || |||||| ||| ||||||| |||| ||| |||||||  | |||||||||||||| ||    
T  24978693 tagtaactttttattgagaaccaataattattgattaaaaattacatattaaatttaaaaaacacaagtttcaagtcaacgtaactactttaaacttgtt 24978792  T
Q  139 atcacaagcaaatttgcacatgatagaaaaact 171  Q
    | ||   ||||| ||| ||||||||||||||||    
T  24978793 aacatgtgcaaacttgtacatgatagaaaaact 24978825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 23803180 - 23803049
Alignment:
Q  37 agtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaactt 135  Q
    |||||||| ||||| ||||||| ||||||||||||||| |||||||  ||||||||||| ||| |||||| ||  ||  ||||||| ||| |||||||||    
T  23803180 agtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatgaaatatacaagttccaatgcaaaatttctattttaaactt 23803081  T
Q  136 cttatcacaagcaaatttgcacatgatagaaa 167  Q
    |||| ||   ||||||||||| ||||||||||    
T  23803080 cttaacatgtgcaaatttgcatatgatagaaa 23803049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 38785924 - 38786059
Alignment:
Q  37 agtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaactt 135  Q
    |||||||||||||| ||||||| ||||||||||||| || ||||||  |||||||||||||||  ||||| ||  ||  ||||||| ||| |||||||||    
T  38785924 agtagtaatttttttttgaaaaacaacaattatttatttgaaagttttatatttaatataaaacgtacaagttccaatacaaaatttctattttaaactt 38786023  T
Q  136 cttatcacaagcaaatttgcacatgatagaaaaact 171  Q
    |||| | || |||| |||| | ||||||||||||||    
T  38786024 cttaactcatgcaagtttggatatgatagaaaaact 38786059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 2379238 - 2379165
Alignment:
Q  2 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||    ||||||||||||||||||    
T  2379238 acatgtgcaatattgcacatgttaaaacaactaaaagtagtaagtttttattgaa---taacaattatttattaaaa 2379165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24569407 - 24569330
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||||| ||||||||||| ||||| || || ||| ||||||||||||| || ||||||||||||||||    
T  24569407 aacatgtgcaatattggacatgttaagacaactacaaataataactttttattgaaaaacatcaattatttattaaaa 24569330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 35094972 - 35095092
Alignment:
Q  9 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaatt 108  Q
    ||||||||||||||||||| |||||||||| ||||| |||| |||||||| || || ||||   | |||||||| ||||||||||||||| ||| |||||    
T  35094972 caatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaaacatcatttat---taaaaagttgtatatttaatataaaatatataaatt 35095068  T
Q  109 ttaagtcaaaattactactttaaa 132  Q
    | |||  ||| |||||| ||||||    
T  35095069 tcaagataaatttactattttaaa 35095092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 51567988 - 51567821
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    |||||| |||| |||||||||||||| | |||||| |||||||| |||||| ||| ||| ||||||||||||||| |||||||  ||||||||||  |||    
T  51567988 aacatgcgcaacattgcacatgttaaaacaactaatagtagtaacttttttcttggaaaacaacaattatttattcaaaagttttatatttaatagtaaa 51567889  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
      ||||| ||| ||  ||||||| ||| ||||||   |||| ||   ||||||||||||||||||||||||    
T  51567888 tgtacaagtttcaatacaaaatttctattttaaa---cttaacatgtgcaaatttgcacatgatagaaaaa 51567821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 11611095 - 11611154
Alignment:
Q  111 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  11611095 aagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 11611154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 9710964 - 9711029
Alignment:
Q  13 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||| | |||||||| |||||| ||||||||||||| ||||||||||| |||||||    
T  9710964 attgcacatgttaaaacaactaaaactagtaagtttttattgaaaaacaacaattattaattaaaa 9711029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 37055536 - 37055367
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||| |||||||||| |||||||   |||||||| |||||| |||  ||||||||  |||||||||||||| |||||||  ||| ||||||||||||    
T  37055536 aacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaaa 37055437  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    | |||| ||   |  |||  |||||| |||||||||||||  |   |||||||| |||||||||||||||    
T  37055436 acacaagttccgatacaactttactattttaaacttcttaatatgtgcaaattttcacatgatagaaaaa 37055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 41151734 - 41151810
Alignment:
Q  93 ataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||||||||||||| ||  ||||  ||||||||||||||||||||||||||   | ||||||||||||||||||||||    
T  41151734 ataaaaaatacaagttccaagttcaaattactactttaaacttcttatcatgtgtaaatttgcacatgatagaaaaa 41151810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 23523065 - 23523124
Alignment:
Q  111 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||||||||||| ||||||||||||||| ||   |||||||||||||||||||||||||    
T  23523065 aagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 23523124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 31318660 - 31318818
Alignment:
Q  14 ttgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaat--tatttattaaaag-ttgcatatttaatataaaaaatacaaatttt 110  Q
    ||||||||||||| | |||||| ||| |||||||||| ||||||| |||||||  |||||||| |||| ||  ||||||||||| |||  ||||| ||      
T  31318660 ttgcacatgttaaaacaactaatagtggtaattttttcttgaaaaacaacaattatatttattcaaagattttatatttaatattaaatgtacaagttcc 31318759  T
Q  111 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||  ||||||| |||  |||||||||||| ||   |||||||| |||||||||||||||    
T  31318760 aatgcaaaatttctatcttaaacttcttaacatgtgcaaattttcacatgatagaaaaa 31318818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 33474598 - 33474471
Alignment:
Q  46 tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcaca 144  Q
    ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || |||||| ||  ||||||| | | | ||||||||||| ||      
T  33474598 tttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatg 33474499  T
Q  145 agcaaatttgcacatgatagaaaaactc 172  Q
     |||||||||||||||||||||||||||    
T  33474498 tgcaaatttgcacatgatagaaaaactc 33474471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 37332123 - 37332253
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||   |||||||| ||  ||||||||||| |||| ||  || ||||||| |||| ||  ||||||||||||||| |    
T  37332123 aacatgtgcaatattgcacatgttaatgcaactaaaattacaaattttttattaaaaaacattaa-tatttatgaaaaattatatatttaatataaaata 37332221  T
Q  101 tacaaattttaagtcaaaattactactttaaa 132  Q
     |||||||| ||| |||| |||| | ||||||    
T  37332222 cacaaatttaaagacaaacttaccattttaaa 37332253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30214179 - 30214102
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaag 79  Q
    ||||||||||||||| |||||  ||||  |||||||| |||||| |||| |||||||| ||||||||||||||||||||    
T  30214179 aacatgtgcaatattacacattctaaggcaactaaaa-tagtaacttttcattgaaaatcaacaattatttattaaaag 30214102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47386930 - 47387008
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattg-aaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||||| ||| ||||   ||||||||||||||| ||||||||| ||||  ||||||||||||||||||    
T  47386930 aacatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaaaaaaacaattatttattaaaa 47387008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 8165654 - 8165823
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttat-taaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| ||||||||| |||| | |||||| | |||||| ||||| ||| ||| |||| |||||||||  |||||||  | | ||||||| |||     
T  8165654 aacatgtgcaacattgcacattttaaaacaactaataatagtaacttttttttggaaaacaacgattatttatacaaaagtttaagagttaatattaaat 8165753  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
     ||||| ||  ||  |||||||  || ||||||||||||| ||   ||||||||||||||||||||||||    
T  8165754 gtacaagttccaatacaaaatttatattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 8165823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24086992 - 24087065
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 74  Q
    ||||||||||| ||||||||| |||| | |||||| |||||||| ||||| || |||| |||||||||||||||    
T  24086992 aacatgtgcaacattgcacatcttaaaacaactaacagtagtaaatttttcttaaaaaacaacaattatttatt 24087065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 53718314 - 53718454
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatta--aaagttgcatatttaatataaaa 98  Q
    ||||| || |||||||||||||||||    | |||| |||| || |||||||| |||| ||| ||||||||||||  ||| || |||| |||||||||||    
T  53718314 aacatttgtaatattgcacatgttaaagagattaaatgtagcaagtttttattaaaaaacaataattatttattagaaaatttacatacttaatataaaa 53718413  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttctta 139  Q
      ||||||||||||   |||| ||||| |||||||||||||    
T  53718414 tgtacaaattttaacataaaactactattttaaacttctta 53718454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 53794781 - 53794870
Alignment:
Q  10 aatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    |||||||||||||||||   |||||||| || ||| | |||||||||||  |||||| ||||||| ||||||| ||||||||||||||||    
T  53794781 aatattgcacatgttaaaccaactaaaaataataactatttattgaaaagtaacaataatttattaaaaagttacatatttaatataaaa 53794870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 54027098 - 54027043
Alignment:
Q  3 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaac 59  Q
    ||||||||||||||||||||||||||| |||||||| || || ||||||||||||||    
T  54027098 catgtgcaatattgcacatgttaagat-actaaaagaagcaactttttattgaaaac 54027043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 13879973 - 13879883
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatat 94  Q
    |||||||||||| ||||| |||| |||||| |||||   || ||||||||||||||| ||||||||||||||||| | | ||||||||||||    
T  13879973 atgtgcaatattacacatcttaaaataactgaaagtgaaaactttttattgaaaacc-acaattatttattaaaaatatacatatttaatat 13879883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1569360 - 1569262
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatta-aaagttgcatatttaatataaaa 98  Q
    ||||| ||||||||||||||| ||||   |||   || ||||||||||||||| |||| ||||||| |||||||| |||||| ||||| ||||||||||    
T  1569360 aacatatgcaatattgcacattttaaagcaacccgaactagtaattttttattaaaaaacaacaataatttattagaaagttacatatctaatataaaa 1569262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8497593 - 8497513
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaa---ttttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||| |||||||||||||| | ||||||||||| |||   ||||||||||||||   ||||||| |||||||||    
T  8497593 aacatgtgcaacattgcacatgttaaaacaactaaaagtaataaggcttttttattgaaaaattacaattaattattaaaa 8497513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 49396472 - 49396558
Alignment:
Q  84 atatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||||||||||||   | ||||||||| ||||| ||||||||||||||||||||  |    |||||||||||||| |||||||||    
T  49396472 atatttaatataaaatgcataaattttaattcaaatttactactttaaacttcttaatatgtacaaatttgcacatggtagaaaaac 49396558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43750060 - 43750117
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 58  Q
    |||||| ||||||||||||||||||||| | |||||||||||||| ||| | ||||||    
T  43750060 aacatgggcaatattgcacatgttaagacatctaaaagtagtaatgtttcactgaaaa 43750117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 22103090 - 22103031
Alignment:
Q  45 ttttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaa 105  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||||    
T  22103090 ttttttattgaaaac-aacaattatttatgaaaaaatgcatatttaatattaaatatacaa 22103031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 27549549 - 27549721
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaa---ttttttattgaaaaccaacaattatttat-taaaagttgcatatttaata---taa 96  Q
    |||||||| |||||||||||||| | |||||||||||||||   ||||| ||| |||  || ||||||||| |  ||||||| |||| ||||||   |||    
T  27549549 atgtgcaacattgcacatgttaaaacaactaaaagtagtaatattttttaattaaaatacatcaattatttgtcaaaaagttacatagttaataatgtaa 27549648  T
Q  97 aaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||  ||||| || |||| |||| |||||||| |||| || ||| ||   |||||||||||||| |||||||||    
T  27549649 aatgtacaagttataagacaaacttactactctaaattttttaacatgtgcaaatttgcacataatagaaaaa 27549721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 172
Target Start/End: Complemental strand, 35414930 - 35414807
Alignment:
Q  50 tattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagca 148  Q
    ||||||||| |||||||||||| || |||||||  ||||| |||| |||| |||||| ||  ||   ||| |||||| ||| ||||||||| ||   | |    
T  35414930 tattgaaaaacaacaattatttgttcaaaagttatatattaaatacaaaatatacaacttccaatataaagttactattttgaacttcttaacatgtgta 35414831  T
Q  149 aatttgcacatgatagaaaaactc 172  Q
    ||||||||||||||||||||||||    
T  35414830 aatttgcacatgatagaaaaactc 35414807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 38989455 - 38989494
Alignment:
Q  11 atattgcacatgttaagataactaaaagtagtaatttttt 50  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  38989455 atattgcacatgttaaaataactaaaagtaataatttttt 38989494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 40930175 - 40930230
Alignment:
Q  116 aaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaact 171  Q
    |||||| ||| ||||||||||||| ||   ||||||||||||||||||||||||||    
T  40930175 aaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaact 40930230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 36812371 - 36812444
Alignment:
Q  105 aattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattatt 179  Q
    ||||| || ||||| |||||||||||||||||||| ||   |||||||| || | ||||||||||||||||||||    
T  36812371 aatttcaaatcaaagttactactttaaacttcttaacatgtgcaaatttaca-aggatagaaaaactctattatt 36812444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15863075 - 15863002
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 74  Q
    |||||||||||||||||||||||||    || ||||||||| || |||  ||||||||  ||||||||||||||    
T  15863075 aacatgtgcaatattgcacatgttacaggaattaaaagtagcaactttacattgaaaaagaacaattatttatt 15863002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35415191 - 35415134
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 58  Q
    |||||||||| ||||||||||||||| | |||||||| |||||| ||| |||| ||||    
T  35415191 aacatgtgcattattgcacatgttaaaacaactaaaaatagtaagtttgtattcaaaa 35415134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 49396367 - 49396436
Alignment:
Q  9 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||| |||||||   |||||||| ||  ||||||| |||||||| | |||||||||||||||||    
T  49396367 caatattgcatatgttaaaggaactaaaaataacaatttttgattgaaaaactacaattatttattaaaa 49396436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 22178027 - 22177972
Alignment:
Q  49 ttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaa 105  Q
    ||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||||    
T  22178027 ttattgaaaac-aacaattatttatgaaaaaatgcatatttaatattaaatatacaa 22177972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 5699 - 5868
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaatttt-ttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |||||||  | |||||||||||||||||    
T  5699 aacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaa 5798  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||||||||||||||| ||| |||||||||||||||| ||| ||   ||||||||||||||||||||||||    
T  5799 atacaaattttaagttaaagttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 52948 - 52779
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  52948 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaa 52849  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||  |||||||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  52848 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 52779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 145686 - 145855
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  145686 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaa 145785  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||  |||||||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  145786 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 145855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 10129112 - 10129281
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  10129112 aacatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 10129211  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||  |||| |||||||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  10129212 cacaagttccaagttaaaattactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 10129281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 39701972 - 39701803
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  39701972 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaaccaacaattactaattaaaagttacatatttaatataaaaaa 39701873  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||||||| |||||||| |||||||||||||||| ||| ||   |||||||||||||||||||||||||    
T  39701872 cacaaatttcaagtcaaagttactactttaaacttgttaacatgtgcaaatttgcacatgatagaaaaac 39701803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 7140628 - 7140459
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||  | ||||||||||||||||||    
T  7140628 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaaa 7140529  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||  |||| ||||||||||||||||||||||||  |   |||||||||||||||||||||||||    
T  7140528 cacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaac 7140459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 13328110 - 13327942
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  13328110 aacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaa 13328011  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
     |||| ||| |||||||| |||||| ||||||||||||| ||   ||||||||||||||||||||||||    
T  13328010 cacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 13327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9743870 - 9744011
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9743870 aacatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 9743969  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatca 142  Q
     | || ||  |||||||| |||||||||||||||||||||||    
T  9743970 cataagttccaagtcaaagttactactttaaacttcttatca 9744011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 19344005 - 19343836
Alignment:
Q  2 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaata-taaaaaa 100  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||| |||||||||||||||||||| | |||||||| ||||||||||| |||||||    
T  19344005 acatgtgcaatattgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaaccaacaattattgagtaaaagttacatatttaatattaaaaaa 19343906  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||| ||| ||||||||||||||||||||||| | ||| ||   |||||||||||||||||| ||||||    
T  19343905 tacaagtttcaagtcaaaattactactttaaacgtgttaacatgtgcaaatttgcacatgataaaaaaac 19343836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 1203610 - 1203784
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||| ||||||||||||||| |||||||||||||||  ||||| |||| ||||||||| || ||||||| |||||  ||| ||||||||||||||||||    
T  1203610 aacatatgcaatattgcacatattaagataactaaaaaaagtaacttttcattgaaaacaaataattattaattaactgttacatatttaatataaaaaa 1203709  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctat 175  Q
     |||| |||| | |||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||    
T  1203710 cacaagtttttaatcaaaattactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctat 1203784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 14816295 - 14816126
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||| ||||| |||| || |||||||||||| |||     
T  14816295 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaat 14816197  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | |||| |||||||||||| ||||||||||||| |||||||||   |||||||||||||||||||||||||    
T  14816196 acacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaac 14816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 14829445 - 14829614
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||| ||||| |||| || |||||||||||| |||     
T  14829445 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaat 14829543  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | |||| |||||||||||| ||||||||||||| |||||||||   |||||||||||||||||||||||||    
T  14829544 acacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaac 14829614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 35678444 - 35678275
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||   ||||||||||||||| |||| |||||||||||||||||| ||||| |||| || |||||||||||| |||     
T  35678444 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaat 35678346  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | |||| ||| |||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||    
T  35678345 acacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgataaaaaaac 35678275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 40210990 - 40210835
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||| |||||||| |||||||||||| ||| |||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  40210990 aacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaa 40210891  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgca 156  Q
     |||||||  |||||||| |||||| ||||||| ||||| ||   |||||||||||    
T  40210890 cacaaattcaaagtcaaagttactaatttaaacgtcttaacatgtgcaaatttgca 40210835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 8140593 - 8140714
Alignment:
Q  18 acatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaa 117  Q
    ||||||||||  ||||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||    
T  8140593 acatgttaaggcaactaaaagtagtgatttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacataaattttaagtcaa 8140692  T
Q  118 aattactactttaaacttctta 139  Q
    ||||| |||||||| |||||||    
T  8140693 aattattactttaatcttctta 8140714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 9801678 - 9801846
Alignment:
Q  2 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat 101  Q
    ||||||||||||||| |||| ||||  ||| |||||||||||| |||| |||||||| ||||||||||| ||||||||||  ||||||||||||| |||     
T  9801678 acatgtgcaatattgtacatattaaagtaattaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttatatatttaatataacaaac 9801777  T
Q  102 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | || ||| |||||||| |||||||||||||||||||| ||   ||||||||||||||||| |||||||    
T  9801778 ataagtttcaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgattgaaaaac 9801846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 26682076 - 26682246
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| ||||||||||||||| ||||| | || |||||||||||||    
T  26682076 aacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaa-caacaattatttattaaaaagctacacatttaatataaaa 26682174  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
       |||| ||  |||||||| ||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  26682175 tgcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 26682246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 38527829 - 38527974
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaac----aattatttattaaaagttgcatatttaatataa 96  Q
    |||||||||||||||||||||||||||  ||||||||||| ||| |||| |||||||||||||    | |||||||||||||| | ||||||||||||||    
T  38527829 aacatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacgattatttatttattaaaagctacatatttaatataa 38527928  T
Q  97 aaaatacaaattttaagtcaaaattactactttaaacttcttatca 142  Q
    |||| |||||||  || ||||||||| |||||||||||||||||||    
T  38527929 aaaacacaaattccaaatcaaaattattactttaaacttcttatca 38527974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 31812121 - 31812291
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||  || | ||||||||| ||||| | |||||||||||| |||     
T  31812121 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctacatatttaatatgaaat 31812220  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  ||||||||||||| | |||||||||||||  |   |||||||||||||||||||||||||    
T  31812221 gcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaatttgcacatgatagaaaaac 31812291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 18567553 - 18567410
Alignment:
Q  33 taaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaa 132  Q
    ||||||| |||| |||| |||||||||||||||||||| |||||| ||| |||||||||||||||||| |||  ||  |||||||| |||||| ||||||    
T  18567553 taaaagtggtaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacatgttccaagtcaaagttactaatttaaa 18567454  T
Q  133 cttcttatcacaagcaaatttgcacatgatagaaaaactctatt 176  Q
    ||||||| ||   ||||||||||||||||||||||||| |||||    
T  18567453 cttcttaacatgtgcaaatttgcacatgatagaaaaaccctatt 18567410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 26834569 - 26834739
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||| ||||| |||||||||| ||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | |||||||||||| |||     
T  26834569 aacatatgcaacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 26834668  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  ||||||||||||| | |||||| ||||||  | | |||||||||||||||||||||||||    
T  26834669 gcacaagttccaagtcaaaattaccattttaaatttcttaatatatgcaaatttgcacatgatagaaaaac 26834739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4080563 - 4080395
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttg-catatttaatataaaaa 99  Q
    |||||||| ||||||||||||||||||  || |||||||||||| |||| ||||||||| |||||||| ||| ||||| ||  |||||||||||||||      
T  4080563 aacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatataaatg 4080464  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
      |||| ||| |||||||| ||||||||||||| |||||||||   ||||||||||||||||||||||||    
T  4080463 c-acaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaa 4080395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 3306224 - 3306055
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||| |  |||||||  |||||| ||| ||||     
T  3306224 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttgatacaaaat 3306126  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||| ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  3306125 gttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 3306055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4103019 - 4102851
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttg-catatttaatataaaaa 99  Q
    |||||||| ||||||||||||||||||  || |||||||||||| |||| ||||||||| |||||||| ||| ||||| ||  |||||||||||||||      
T  4103019 aacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatataaa-- 4102922  T
Q  100 atacaaa--ttttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
     | ||||  ||| |||||||| ||||||||||||| |||||||||   ||||||||||||||||||||||||    
T  4102921 -tgcaaaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaa 4102851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4084712 - 4084544
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaa 99  Q
    |||||||| ||||||||||||||||||  || |||||||||||| |||| ||||||||| |||||||| ||| | |||| || |||||||||||| |||     
T  4084712 aacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatat-aaat 4084614  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
      | || ||| |||||||| ||||||||||||| |||||||||   ||||||||||||||||||||||||    
T  4084613 gcataagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaa 4084544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 39024997 - 39024857
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 128  Q
    ||||||||||| ||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||   |||||||  |||||||| |||||||||    
T  39024997 aactaaaagtaataactttttattgaaa-ccaacaattaattattaaaaatctacatagttaatataaaatgcacaaattccaagtcaaagttactactt 39024899  T
Q  129 taaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||||||||||||   |||||||||||||||||||||||||    
T  39024898 taaacttcttatcatgtgcaaatttgcacatgatagaaaaac 39024857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 2161396 - 2161565
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||  ||||     
T  2161396 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaattcaaaat 2161494  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  2161495 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 2161565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 8284739 - 8284563
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgca--tatttaatataaaa 98  Q
    |||||||||| |||||||||||||||   ||||||||||||||| |||||||| ||||  ||||||||||||||||||    ||  ||||||||||||||    
T  8284739 aacatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaagaccacctatttaatataaaa 8284640  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctat 175  Q
     | |||| ||  ||||| || || ||| ||||||||||||| ||    |||||||||||||||||||||||| ||||    
T  8284639 tacacaagttccaagtcgaagttgctaatttaaacttcttaacatgtacaaatttgcacatgatagaaaaaccctat 8284563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 39703466 - 39703561
Alignment:
Q  5 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||  || ||||||||||||||    ||||||||| ||||||||||||||||||    
T  39703466 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttaaaaaccaacaattacgggttaaaagttacatatttaatataaaaaa 39703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 12131991 - 12132161
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||   |||||||||||| || ||||||||||||| | |||| |||||||| |||||||  |||||||||||||||     
T  12131991 aacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagttatatatttaatataaaat 12132090  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| ||||||||||||| |||||| ||   |||| |||||| |||||||||||||    
T  12132091 gttcaagttccaatacaaacttactactttaaatttcttaacatgtgcaagtttgcagatgatagaaaaac 12132161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 38843712 - 38843882
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||     
T  38843712 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 38843811  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||  ||   ||||||  || ||||||||||||| ||   |||||||| ||||||||||||||||    
T  38843812 gtacaagttccaataaaaaatttatattttaaacttcttagcatgtgcaaatttacacatgatagaaaaac 38843882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 44091346 - 44091494
Alignment:
Q  20 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaa 118  Q
    ||||||| | ||| ||||||| |||||||||||||||||| ||||||||||||||||||   | || |||||||||||||   |||| || ||| |||||    
T  44091346 atgttaaaacaacgaaaagtattaattttttattgaaaac-aacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaa 44091444  T
Q  119 attactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
     ||||||||||||| |||||| || | |||||||| ||||||||||||||    
T  44091445 gttactactttaaatttcttaacatatgcaaatttacacatgatagaaaa 44091494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 45516316 - 45516395
Alignment:
Q  20 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| | ||||||||||||| ||||    
T  45516316 atgttaagataactaaaagtagtaactttttattg-aaactaacaattatttattaaaagctacatatttaatatataaaa 45516395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36967240 - 36967077
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||| ||||||||||| |||||| |||||||| ||||| ||| ||| |||||||||| |||| |||||||  ||||||||||| |||     
T  36967240 aacatgtgcaacattgtacatgttaagacaactaatagtagtaactttttcttggaaaacaacaattatatattcaaaagttttatatttaatattaaat 36967141  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgata 163  Q
     | ||| ||| ||  |||| || ||| ||||||||||||| ||   ||||||||||||||||||    
T  36967140 gtgcaagtttcaatacaaagtttctattttaaacttcttaacatgtgcaaatttgcacatgata 36967077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 12189758 - 12189588
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||  |||||||||||||| | |||||| |||| ||| ||||| ||||||| ||||||||||||||| ||||  |  ||||||||||| |||     
T  12189758 aacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaat 12189659  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||  ||   ||| || ||| ||||||||||||||||   |||||||||||||||||||||||||    
T  12189658 gtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 12189588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 12434186 - 12434016
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||  |||||||||||||| | |||||| |||| ||| ||||| ||||||| ||||||||||||||| ||||  |  ||||||||||| |||     
T  12434186 aacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaat 12434087  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||  ||   ||| || ||| ||||||||||||||||   |||||||||||||||||||||||||    
T  12434086 gtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 12434016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 26364159 - 26363990
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| || |||||||| |||| |||||||||||| |  |||||||  | | |||||| ||||     
T  26364159 aacatgtgcaatattgcacatgttaaggtaactaaaagtagaaagtttttatt-aaaatcaacaattatttaacaaaaagttatacaattaatagaaaat 26364061  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  26364060 gttcaagttccaatgcaaagttactattttaaatttcttaacatgcgcaaatttgcacatgatagaaaaac 26363990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 38213115 - 38212942
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaatt-ttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    ||||||||||| |||||||||||||| | |||||| ||| |||| | |||| ||||||| || |||||||| ||| |||||||  ||||||||||| | |    
T  38213115 aacatgtgcaacattgcacatgttaaaacaactaatagtggtaactgtttttttgaaaaacagcaattattcatttaaaagttttatatttaatattaca 38213016  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
      ||||| ||| ||   |||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||||    
T  38213015 tgtacaagtttcaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaactc 38212942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 9580276 - 9580109
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt---aaaagttgcatatttaatataaaaaa 100  Q
    |||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| |||||||||||||||   |||| ||  ||||||||||| |||      
T  9580276 atgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaaaaatt--atatttaatattaaatg 9580179  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||| ||| ||  ||||||| ||| ||||||||||||| ||   | |||||||||||||||| ||||||    
T  9580178 tacaagtttcaatacaaaatttctattttaaacttcttaacatgtgtaaatttgcacatgataaaaaaac 9580109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 45005978 - 45006072
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatat 94  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  |||||||||||    
T  45005978 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatat 45006072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 20514640 - 20514809
Alignment:
Q  1 aacatgtgcaa-tattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    ||||||||||| ||||||||||| |||   |||| ||||||||||||| ||||||||||  | |||||||||||| |||||||  |||||||||||||||    
T  20514640 aacatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagttatatatttaatataaaa 20514739  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
      ||||| ||  ||| |||| |||| | |||||| |||||| |    |||||| ||||||||||||||||    
T  20514740 tgtacaagttccaagacaaacttaccattttaaatttcttaacctgtgcaaatatgcacatgatagaaaa 20514809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 29642648 - 29642781
Alignment:
Q  38 gtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaat-acaaattttaagtcaaaattactactttaaacttc 136  Q
    ||||||| |||| |||||||| || ||||||||  | ||||||||  ||||||||||||||||  |||| ||| ||| |||| |||| | |||||| | |    
T  29642648 gtagtaacttttcattgaaaaacaccaattattattaaaaagttgtctatttaatataaaaaaacacaagtttcaagacaaacttaccattttaaattcc 29642747  T
Q  137 ttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||| | |||||||||||||||||||||||||    
T  29642748 ttatcatatgcaaatttgcacatgatagaaaaac 29642781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33514670 - 33514593
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||||||||||||||||  |||||||||||| ||  |||||||||||| ||||||  |||||||||||    
T  33514670 aacatgtgcaatattgcacatgttaaggaaactaaaagtagcaaccttttattgaaaaacaacaaccatttattaaaa 33514593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 28015026 - 28014858
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||||||| || |||| ||||| |||||| |  | ||||| ||||| || |||  ||||||||||||||| |||||||  ||||||||||| |||     
T  28015026 aacatgtgcaatgttacacaagttaaaataacttattgcagtaacttttttttaaaa--caacaattatttattcaaaagttttatatttaatattaaat 28014929  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||  ||  ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  28014928 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 28014858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7750676 - 7750734
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaac 59  Q
    |||||||||||||||||||||||||| | |||||||||||| || ||||||||||||||    
T  7750676 aacatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaaac 7750734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 45519658 - 45519564
Alignment:
Q  74 taaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    |||||| | |||||||||||||||||| |||| ||  |||| ||| |||||||||||||||||||||||   |||||||||  ||||||||||||    
T  45519658 taaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttatcatgtgcaaatttgtgcatgatagaaaa 45519564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 37264521 - 37264586
Alignment:
Q  13 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||||| | ||||||||||||||| || |||||||||| ||| |||||||||||||||    
T  37264521 attgcacatgttaaaacaactaaaagtagtaaattgttattgaaaatcaataattatttattaaaa 37264586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 34249685 - 34249784
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt--aaaagttgcatatttaatataaaa 98  Q
    |||||||||||| ||| ||||| ||||| | ||||||||| |||||||| |||||||| ||  |||||||||||  |||||||  |||||||||||||||    
T  34249685 aacatgtgcaatgttgtacatgataagacagctaaaagtattaatttttcattgaaaaacactaattatttattaaaaaagttaaatatttaatataaaa 34249784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 34869692 - 34869560
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| ||||||| |||||| | |||||| | |||||| ||||| || |||| ||||||||||||||| |||||||  ||||||| ||| ||||    
T  34869692 aacatgtgcaacattgcacgtgttaaaacaactaataatagtaactttttcttcaaaaacaacaattatttattcaaaagttttatatttattattaaaa 34869593  T
Q  100 atacaaattttaagtcaaaattactactttaaa 132  Q
     || |||||| ||  ||||||| ||| ||||||    
T  34869592 gtataaatttcaatacaaaatttctattttaaa 34869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1844731 - 1844632
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattt-tttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    ||||||| |||||||||||| ||| | | |||||||||||| ||||| |||||| ||||  |||||||||||||| |||||||  |||||||||||||||    
T  1844731 aacatgtacaatattgcacacgttgaaacaactaaaagtagaaatttctttattaaaaagtaacaattatttattaaaaagttaaatatttaatataaaa 1844632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 5573312 - 5573464
Alignment:
Q  17 cacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtc 115  Q
    |||||||||| |||||||||| ||  || ||||||||||||| ||||||| ||||||||||| |||  |||| ||||| ||||  || || || |||  |    
T  5573312 cacatgttaaaataactaaaaataacaagtttttattgaaaaacaacaatcatttattaaaaagtt--atatataatacaaaatgtataagttctaatgc 5573409  T
Q  116 aaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||| || || ||||||||||||| ||    ||||||||||||||||||||||||    
T  5573410 aaaagtattattttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 5573464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 16445886 - 16445732
Alignment:
Q  20 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaa 118  Q
    ||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||  ||| | ||  ||  ||||    
T  16445886 atgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtac-agttccaatacaaa 16445788  T
Q  119 attactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactcta 174  Q
    ||| ||| |||||||||||||  |   |||||||||||||| ||||||||||||||    
T  16445787 atttctattttaaacttcttaatatgtgcaaatttgcacataatagaaaaactcta 16445732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 27874849 - 27874681
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||||||| || |||| ||||| |||||| |  | ||||| ||||| || |||  ||||||||||||||| |||||||  ||||||||||| |||     
T  27874849 aacatgtgcaatgttacacaagttaaaataacttattgcagtaacttttttttaaaa--caacaattatttattcaaaagttttatatttaatattaaat 27874752  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||  ||  |||||||  || ||||||||||||| ||   |||||||||||||||||||||||||    
T  27874751 gtacaagttccaatacaaaatttgtattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 27874681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 35741016 - 35740957
Alignment:
Q  83 catatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatca 142  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||||| || ||||||    
T  35741016 catatttaatataaaaaacacaaatttttagtcaaaattactacattaaaatttttatca 35740957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 40226112 - 40225985
Alignment:
Q  46 tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcaca 144  Q
    ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || |||||| ||  ||||||| | | | ||||||||||| ||      
T  40226112 tttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatg 40226013  T
Q  145 agcaaatttgcacatgatagaaaaactc 172  Q
     |||||||||||||||||||||||||||    
T  40226012 tgcaaatttgcacatgatagaaaaactc 40225985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 6818025 - 6818195
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||||||||||| | |||||||   |||||||| |||||| |||  ||||||||  |||||||||||||| |||||||  ||| |||||||||||     
T  6818025 aacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaat 6818124  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||   |  |||  |||||| ||||||||||||| ||    ||||||||||||||||||||||||    
T  6818125 gcacaagttccgatacaattttactattttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 6818195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 31451420 - 31451502
Alignment:
Q  88 ttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||||||||||| |||| ||| |||| ||| |||||||||||||||||||| |||  ||||||||   ||||||||||||||    
T  31451420 ttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacacgtgcaaatttatccatgatagaaaaac 31451502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 32186194 - 32186363
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||| |||| |||||| ||||||| | |||||| |||||||| ||||| ||  ||| ||||| |||| |||| |||||||  ||||||||||| |||     
T  32186194 aacatgagcaacattgcaaatgttaaaacaactaatagtagtaactttttcttagaaaacaacatttatatattcaaaagttttatatttaatattaaat 32186293  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
     |  |||||| ||   |||||| ||| ||||||||| ||| || | ||||||||||||| ||||||||||    
T  32186294 gtgtaaatttcaatataaaatttctattttaaacttattaacatatgcaaatttgcacacgatagaaaaa 32186363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 12346015 - 12346087
Alignment:
Q  2 acatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 74  Q
    |||||||||| ||| |||||||||| | || ||| |||||||| ||||| ||||||| |||||||||||||||    
T  12346015 acatgtgcaacattacacatgttaaaacaattaatagtagtaactttttcttgaaaaacaacaattatttatt 12346087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 6850737 - 6850674
Alignment:
Q  11 atattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 74  Q
    ||||||||||||  || | |||||| |||||||| ||||||||||||| |||||||||||||||    
T  6850737 atattgcacatgacaaaacaactaatagtagtaactttttattgaaaaacaacaattatttatt 6850674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 14961718 - 14961663
Alignment:
Q  115 caaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||||||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  14961718 caaaattactattttaaacttcttagcatgtgcaaatttgcacatgatagaaaaac 14961663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10974724 - 10974626
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    ||||| |||| ||||| | |||||||   |||||||||||||||  |||||||||||| ||| || |||||||| |||| || ||||||||||||||||    
T  10974724 aacatatgcactattgtatatgttaaagcaactaaaagtagtaacattttattgaaaaacaataactatttattaaaaaattacatatttaatataaaa 10974626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13496902 - 13496824
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataact-aaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||||||||||||||   |||| |||| |||||| |||  ||||||||  ||||||||||||||||||    
T  13496902 aacatgtgcaatattgcacatgttaaaggaactaaaaaatagtaactttacattgaaaaagaacaattatttattaaaa 13496824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 39430522 - 39430606
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaa--caattatttattaaaagttgcatatttaatataaaaaatacaaattttaa 112  Q
    ||||||||||||||| |||| ||||||||  ||  |||||||||||||||| ||  | ||||||||||||| ||| |||||||||    
T  39430522 aactaaaagtagtaagttttgattgaaaaaaaaaacaattatttattaaaaattatacatttaatataaaatatataaattttaa 39430606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35746058 - 35745982
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaa 77  Q
    |||||||||||||||| |  ||||||  |||||||||| | ||| |||| ||||||||| |||||||||| ||||||    
T  35746058 aacatgtgcaatattgaaattgttaaagtaactaaaagaaataacttttcattgaaaacaaacaattattaattaaa 35745982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40716283 - 40716353
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaatttttt-attgaaaaccaacaattattt 71  Q
    ||||||||||||||||||||||||||  ||||||||||| | |||||||| ||| | || ||||||||||||    
T  40716283 aacatgtgcaatattgcacatgttaatctaactaaaagt-gaaattttttaattaagaaacaacaattattt 40716353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 33430283 - 33430189
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatat 94  Q
    ||||||| ||| ||||||||| |||| | |||||| |||| ||| ||||| || |||| ||||||||||| ||| |||||||  |||||||||||    
T  33430283 aacatgttcaacattgcacatattaaaacaactaatagtaataactttttcttaaaaaacaacaattattaattcaaaagttttatatttaatat 33430189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11923023 - 11923096
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 74  Q
    |||||||||||||||||||| ||||| | |||| ||| |  ||| ||||||||||||| ||  |||||||||||    
T  11923023 aacatgtgcaatattgcacaagttaaaacaactgaaaatgataactttttattgaaaaacactaattatttatt 11923096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 32195954 - 32195874
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaa 112  Q
    |||||||| || ||||||||||||||||   ||||| |||||||||||| | | ||||||||||||||||   |||||||||||    
T  32195954 aactaaaaataataattttttattgaaa---aacaactatttattaaaatgctacatatttaatataaaatgaacaaattttaa 32195874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 45518067 - 45518128
Alignment:
Q  107 ttttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    |||||||| ||| |||||| |||||||||||||| |    ||||||||||||||||||||||    
T  45518067 ttttaagttaaagttactagtttaaacttcttattatgtacaaatttgcacatgatagaaaa 45518128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 7489654 - 7489778
Alignment:
Q  45 ttttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcac 143  Q
    ||||||||||||||  | |||| | ||||||||| |||  | ||||||||||||| ||| |||||||||  |||| ||| || |||||| |||| | ||     
T  7489654 ttttttattgaaaaatagcaatcaattattaaaaagttatacatttaatataaaatatataaattttaatacaaacttattattttaaaattctaaacat 7489753  T
Q  144 aagcaaatttgcacatgatagaaaa 168  Q
       ||||||||||||||||||||||    
T  7489754 gcacaaatttgcacatgatagaaaa 7489778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 13496757 - 13496709
Alignment:
Q  122 actactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  13496757 actattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 13496709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 15868101 - 15868053
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||||||  || ||||||||||||| ||||||||| |||||||||    
T  15868101 aactaaaagtaacaactttttattgaaaaacaacaattacttattaaaa 15868053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 29912172 - 29912132
Alignment:
Q  102 acaaattttaagtcaaaattactactttaaacttcttatca 142  Q
    ||||||||||||  |||||| ||||||||||||||||||||    
T  29912172 acaaattttaagataaaatttctactttaaacttcttatca 29912132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 2795532 - 2795701
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  2795532 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaa 2795631  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| ||  |||||||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  2795632 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 2795701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31366121 - 31365947
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaa--ttttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaa 98  Q
    ||||||||||||||||||||||||||| || ||||| |||||||  |||||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  31366121 aacatgtgcaatattgcacatgttaaggtagctaaatgtagtaactttttttattgaaaaccaacaattattgattaaatgttacatatttaatataaaa 31366022  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 173  Q
    || |||| ||  |||||||| |||||| ||||||||||||| ||    |||||||||||||||||||||||||||    
T  31366021 aacacaagttccaagtcaaagttactaatttaaacttcttaacatgtacaaatttgcacatgatagaaaaactct 31365947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 15190881 - 15191050
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatat-aaaaa 99  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||| |||||    
T  15190881 aacatgtgcaatattgcatatgttaaggtaagtaaaagtagtaatttttcattgaaaacaaacaattattgattaaaagttacatatttaatataaaaaa 15190980  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    | |||| ||| ||||||||||||||||||||||||||||| ||   ||||||||  |||||||| |||||    
T  15190981 acacaagtttcaagtcaaaattactactttaaacttcttaacatgtgcaaatttatacatgataaaaaaa 15191050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 34578020 - 34578188
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||| |||||||| || |||||||| | ||||||||||||||||||    
T  34578020 aacatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaatcaacaattgttgattaaaagctacatatttaatataaaaaa 34578119  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||||| |||||||| ||| |||||| ||||||||| ||| ||   |||||||||||||||||| |||||    
T  34578120 tacaagttttaagttaaagttactattttaaactttttaacatgtgcaaatttgcacatgataaaaaaa 34578188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 30328496 - 30328358
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||| |||||||| | ||||||||||||||||||    
T  30328496 aacatgtgcaatattgcacatgttaagataactaaaagtagtcatttttcattaaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 30328397  T
Q  101 tacaaattttaagtcaaaattactactttaaacttctta 139  Q
     |||| ||  |||| ||| ||||||||||||||||||||    
T  30328396 cacaagttccaagttaaagttactactttaaacttctta 30328358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 4047429 - 4047590
Alignment:
Q  9 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaatt 108  Q
    |||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||| || |||||||| | |||||||||||||||||| |||| ||    
T  4047429 caatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagtt 4047528  T
Q  109 ttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  4047529 ccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 4047590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 8103749 - 8103572
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||  |||||||| |||||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||     
T  8103749 aacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaat 8103651  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattat 178  Q
      |||| ||  |||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||    
T  8103650 gcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctattat 8103572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 11636740 - 11636909
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttg-catatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||   ||||||||||||||| |||| |||||||||||||||||| ||||||||| ||  |||||||||||||||      
T  11636740 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatataaatg 11636839  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||| |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  11636840 c-acaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 11636909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 11375972 - 11376140
Alignment:
Q  5 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatac- 103  Q
    ||||||||||||||||||||||   ||||||||||||||| |||| |||||||| ||| |||||||||||||||| | |||||||||||||||||| ||     
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaatcaataattatttattaaaagctacatatttaatataaaaaacaca 11376071  T
Q  104 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
    |||||| |||||||| |||||||||||||||| ||||||     |||||| ||||||||||||||||||    
T  11376072 aaatttcaagtcaaagttactactttaaactttttatcatgtataaatttacacatgatagaaaaactc 11376140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 12642162 - 12641991
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||| |||||||||||||||||||   ||||| ||| ||||||||||||||||||    
T  12642162 aacatgtgcaatattgtacatgttaaggcaactaaaagtagtaatttttcattgaaaaccaacaattatcgtttaaatgttacatatttaatataaaaaa 12642063  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
     |||| ||  || ||||| ||| || ||||||||||||| ||   |||||||||||||| ||||||||||||    
T  12642062 cacaagttccaaatcaaagttattaatttaaacttcttaacatgtgcaaatttgcacattatagaaaaactc 12641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 9184216 - 9184354
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||| |||||||||||||||||| |||||||||||||||| |||| |||||||||||| ||||||| |||||||  | ||||||||||||||||||    
T  9184216 aacatgtgtaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaataattattgattaaaaactacatatttaatataaaaaa 9184315  T
Q  101 tacaaattttaagtcaaaattactactttaaacttctta 139  Q
     |||| ||  |||| ||| ||||||||||||||||||||    
T  9184316 cacaagttccaagttaaagttactactttaaacttctta 9184354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 28629890 - 28630056
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatac 103  Q
    |||| ||||||||||||||||||   |||||||| || ||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  28629890 atgtacaatattgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacac 28629989  T
Q  104 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcac-atgatagaaaaa 169  Q
    || | | |||| |||  || |||||||||||||||||||   |||||||||||| ||||||||||||    
T  28629990 aagtctcaagttaaagatattactttaaacttcttatcatgtgcaaatttgcacgatgatagaaaaa 28630056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 34 - 169
Target Start/End: Original strand, 41350244 - 41350379
Alignment:
Q  34 aaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaac 133  Q
    ||||||| |||||||  | |||||| |||||||||||||||||||||| |||||||||||||||||  |||| ||  |||||||||||||||||||||||    
T  41350244 aaaagtattaattttgcactgaaaatcaacaattatttattaaaagttacatatttaatataaaaagcacaagttccaagtcaaaattactactttaaac 41350343  T
Q  134 ttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    |||||| ||   |||||||||||||||||| |||||    
T  41350344 ttcttaacatgtgcaaatttgcacatgataaaaaaa 41350379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 18841875 - 18841705
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||     
T  18841875 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 18841776  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||||||| ||  ||||||| ||| ||||||||| ||| || | ||||||||||||| |||| ||||||    
T  18841775 gtacaaatttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcacacgataaaaaaac 18841705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 30839790 - 30839959
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  30839790 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 30839888  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  30839889 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 30839959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 36597588 - 36597757
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  36597588 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 36597686  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  36597687 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 36597757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 3398228 - 3398398
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| | | ||||||||| |||||||||  ||||||||||| |||     
T  3398228 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 3398327  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||  ||  ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  3398328 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 3398398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24329804 - 24329670
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| ||||  |||||||||||| |||||||||||||||||| |||||||| ||||| ||||||| ||||||| | | ||||||||||||||     
T  24329804 aacatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaat 24329706  T
Q  100 atacaaattttaagtcaaaattactactttaaactt 135  Q
     ||||| ||  |||||||| |||| |||||||||||    
T  24329705 gtacaagttccaagtcaaagttaccactttaaactt 24329670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 5958293 - 5958196
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaa 97  Q
    ||||||||||||||| ||||||||||   |||||||||||||||||||| |||||||| ||||||||| ||||| |||| || |||||||||||||||    
T  5958293 aacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaatttacatatttaatataaa 5958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 16174762 - 16174623
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaag-ttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 128  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||||  || |||||||||||||||    |||| ||| || ||||| |||||||||    
T  16174762 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaacttacatatttaatataaatgc-acaagtttcaattcaaagttactactt 16174664  T
Q  129 taaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    |||| ||||||| |   ||||||||||| ||||||||||||    
T  16174663 taaatttcttatgatgtgcaaatttgcaaatgatagaaaaa 16174623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 40512960 - 40513126
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| ||||||||| ||| |||||||||||| |  |||||||  |||||| ||| ||||     
T  40512960 aacatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattg-aaatcaacaattatttaacaaaaagttatatatttgatacaaaat 40513058  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaa 167  Q
    || ||||||  ||  |||| |||||| |||||| || ||| ||   ||||||||| ||||||||||||    
T  40513059 attcaaattccaatgcaaagttactattttaaattttttaacatgtgcaaatttgtacatgatagaaa 40513126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 14466598 - 14466495
Alignment:
Q  66 ttatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgataga 165  Q
    ||||| |||||||| | |||||||||||||||||| |||| ||| |||| ||| |||||||||||||||||||| ||     ||||||||||||||||||    
T  14466598 ttattgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacatgtctaaatttgcacatgataga 14466499  T
Q  166 aaaa 169  Q
    ||||    
T  14466498 aaaa 14466495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 31567633 - 31567493
Alignment:
Q  29 taactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaaattactact 127  Q
    |||||||||  ||||| ||||||||||||| ||| ||||||| |||||||   | ||||||||||||||||   |||||||| ||| ||||||||| | |    
T  31567633 taactaaaaagagtaactttttattgaaaaacaataattattcattaaaaaactacatatttaatataaaatgaacaaatttcaagacaaaattaccatt 31567534  T
Q  128 ttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    ||||| || ||| ||   ||||||||||| |||||||||||    
T  31567533 ttaaattttttaacatgtgcaaatttgcatatgatagaaaa 31567493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 6863584 - 6863734
Alignment:
Q  20 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaatacaaattttaagtcaaa 118  Q
    |||||||| ||||||||||||| || ||||||||| |||||||||||||||| || |||||||  |||||||||| ||||  | ||| ||  ||   |||    
T  6863584 atgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaataaaaagttatatatttaatacaaaatgttcaagttccaatataaa 6863682  T
Q  119 attactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||||| |||||| || ||| ||   |||||||||||||||||||||||||    
T  6863683 gttactattttaaattttttaacatgtgcaaatttgcacatgatagaaaaac 6863734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 18150454 - 18150561
Alignment:
Q  34 aaaagtagtaat-tttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaa 131  Q
    |||||||||||  ||||||||||| | || |||||||||||||||| |||  |||||||||| |||| |||||| || |||  ||||||||||| |||||    
T  18150454 aaaagtagtaaagtttttattgaataacaccaattatttattaaaatgttatatatttaatacaaaatatacaagttctaacgcaaaattactattttaa 18150553  T
Q  132 acttctta 139  Q
    ||||||||    
T  18150554 acttctta 18150561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 32020154 - 32019982
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa--gttgcatatttaatataaaa 98  Q
    ||||||||||||||||||| |||||||  |||||||  |||||| ||||  ||||||| || | |||||| |||||||  |||   ||||||||||| ||    
T  32020154 aacatgtgcaatattgcacttgttaaggaaactaaatctagtaacttttctttgaaaaacaccgattatt-attaaaaaagttatctatttaatatagaa 32020056  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
     | |||| ||  ||| |||| |||| | |||||| |||||| ||   |||||||||||||||||||||||||||    
T  32020055 tacacaagttccaagacaaacttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaactc 32019982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10665134 - 10665077
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 58  Q
    |||||||| |||||||||||||||||| |||||||||||| ||| |||| ||||||||    
T  10665134 aacatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaa 10665077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 30893744 - 30893805
Alignment:
Q  107 ttttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    |||||||||||| |||||| ||||||||||||| ||   |||||||||||||||||||||||    
T  30893744 ttttaagtcaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 30893805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 33072685 - 33072785
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagta--attttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaa 97  Q
    ||||||||||||||||||||||||||   ||||||||||||||   |||||||||||||  || |||||||||||| ||||| |  |||||||| |||||    
T  33072685 aacatgtgcaatattgcacatgttaaatcaactaaaagtagtacttttttttattgaaagacatcaattatttattgaaaagctatatatttaacataaa 33072784  T
Q  98 a 98  Q
    |    
T  33072785 a 33072785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 3738042 - 3737952
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatat 94  Q
    |||||||| |||||||||||||| | |||||| |||||||| ||||| | | ||| ||||||||||||||| |||||||  |||||||||||    
T  3738042 atgtgcaacattgcacatgttaaaacaactaatagtagtaacttttt-tcggaaaacaacaattatttattcaaaagttttatatttaatat 3737952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11360194 - 11360265
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattattt 71  Q
    ||||||| ||||||| |||||||||| | ||||||||||||||| ||||||||| |||| ||| ||||||||    
T  11360194 aacatgttcaatattacacatgttaaaacaactaaaagtagtaatttttttattaaaaaacaataattattt 11360265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11692801 - 11692758
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaa 44  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  11692801 aacatgtacaatattgcacatgttaaaataactaaaagtagtaa 11692758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26376739 - 26376666
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 74  Q
    ||||||||||| |||| ||||||||| | || ||| |||||||| ||||| ||| ||| |||||||||||||||    
T  26376739 aacatgtgcaacattgtacatgttaaaacaaataatagtagtaactttttcttggaaaacaacaattatttatt 26376666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 38994213 - 38994136
Alignment:
Q  33 taaaagtagtaatttttta-ttgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattt 109  Q
    ||||| ||| ||||||||| ||||||   |||||||||||||||||||||  ||||||| ||||||| ||||||||||    
T  38994213 taaaaatagcaattttttaattgaaatataacaattatttattaaaagttatatatttactataaaatatacaaattt 38994136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11250126 - 11250056
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 72  Q
    ||||||||||||||||||||||||||   |||||||||||| ||  ||||| ||| || |||||||||||||    
T  11250126 aacatgtgcaatattgcacatgttaaagcaactaaaagtagcaa-gttttaatgataaacaacaattattta 11250056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 26265162 - 26265075
Alignment:
Q  53 tgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctta 139  Q
    |||||| ||||||||||||||| |||||||  ||||||||||| ||| |||||| ||| ||  ||||| | ||| |||||||||||||    
T  26265162 tgaaaaacaacaattatttatttaaaagttttatatttaatattaaatatacaagtttcaatacaaaacttctattttaaacttctta 26265075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 29538768 - 29538827
Alignment:
Q  33 taaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaat 92  Q
    |||||| ||||| |||| ||| ||||||||||||||||||||||||| |  |||||||||    
T  29538768 taaaagaagtaacttttcattaaaaaccaacaattatttattaaaagctatatatttaat 29538827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 35469561 - 35469660
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaat-tatttattaaaagttgcatatttaatataaaa 98  Q
    |||||||| | || ||||||||||||  ||||||||||||| || |||||||||||||| |||||||  ||| |  |||||||  |||||||||||||||    
T  35469561 aacatgtgaattagtgcacatgttaaagtaactaaaagtagcaatttttttattgaaaaacaacaatcaattaagaaaaagttatatatttaatataaaa 35469660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 15820274 - 15820312
Alignment:
Q  41 gtaattttttattgaaaaccaacaattatttattaaaag 79  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  15820274 gtaattttttattgaaaaacaataattatttattaaaag 15820312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24014857 - 24014799
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaac 59  Q
    ||||||||||| |||||||||||||| | |||||||||||  || |||||||| |||||    
T  24014857 aacatgtgcaacattgcacatgttaaaacaactaaaagtataaagtttttattcaaaac 24014799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32282876 - 32282819
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 58  Q
    |||||||| ||||||| |||| |||| |||| |||||||| ||| |||||||||||||    
T  32282876 aacatgtgtaatattgtacatattaaaataattaaaagtaataaatttttattgaaaa 32282819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 23553578 - 23553747
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaatttt-ttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |||||||  | |||||||||||||||||    
T  23553578 aacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaa 23553677  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||||||||||||||| ||| |||||||||||||||| ||| ||   ||||||||||||||||||||||||    
T  23553678 atacaaattttaagttaaagttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 23553747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 7349697 - 7349866
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||| ||||||||||||||||||||||  ||||||||||| ||| |||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  7349697 aacacgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgttaaaagttacatatttaatataaaaaa 7349796  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||| |||||||||||| |||||||||||||||||||||||    ||||||| ||||||||||||||||    
T  7349797 cacaagttttaagtcaaagttactactttaaacttcttatcatgtacaaatttacacatgatagaaaaac 7349866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 29190982 - 29190816
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatac 103  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| ||||| ||    
T  29190982 atgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttgcatatttaatattaaaaacac 29190883  T
Q  104 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    || ||  |||||||| |||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  29190882 aagttccaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 29190816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 7 - 170
Target Start/End: Complemental strand, 10813658 - 10813494
Alignment:
Q  7 tgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatattt-aatataaaaaatacaa 105  Q
    |||||||||||| ||||||||  ||||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||| ||||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattatttgttaaaagttacatattttaatttaaaaaacacaa 10813559  T
Q  106 attttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||||||||||| |||||||||||||||| |||||| | |||||| ||||||||||||||||||    
T  10813558 attttaagtcaaagttactactttaaacttattatcatatgcaaatctgcacatgatagaaaaac 10813494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 4329635 - 4329772
Alignment:
Q  33 taaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaa 132  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||||| |||||||||||||||||| | |||||| |||||||| |||||||||||||    
T  4329635 taaaagtagtaatttttaattgaaaaccaacgattattgattaaaagttacatatttaatataaaaaacataaatttcaagtcaaagttactactttaaa 4329734  T
Q  133 cttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||| ||| || | |||||||||||||||||||||||||    
T  4329735 ctttttaacatatgcaaatttgcacatgatagaaaaac 4329772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 53961350 - 53961503
Alignment:
Q  20 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaa 119  Q
    |||||||  ||||||||||||||||||||| |||||||| |||||||||||  ||||| ||| |||||||||||||||||| |||||||| |||||||||    
T  53961350 atgttaaagtaactaaaagtagtaatttttcattgaaaatcaacaattattgtttaaatgttacatatttaatataaaaaacacaaatttcaagtcaaaa 53961449  T
Q  120 ttactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 173  Q
    |||||| ||||||||||||| ||   ||||||||||||| ||||||||||||||    
T  53961450 ttactaatttaaacttcttaacatgtgcaaatttgcacacgatagaaaaactct 53961503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 41415697 - 41415557
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactacttt 129  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||||||| | |||||||||||||||||| |||||||| |||||||| ||||||||||    
T  41415697 aactaaaagtagtaacttttaattgaaaatcaacaattatttattaaaagctacatatttaatataaaaaacacaaatttcaagtcaaagttactacttt 41415598  T
Q  130 aaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||| ||||||   |||||||||||||||||| ||||||    
T  41415597 aaacttattatcatgtgcaaatttgcacatgatataaaaac 41415557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 36000109 - 35999947
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||| |||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  36000109 aacatatgcaatattgtacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 36000010  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||       |||| ||| |||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  36000009 cac-------aagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 35999947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 16667554 - 16667385
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||| |||||||| ||||| ||||||||| ||||| | ||||||||||||||||     
T  16667554 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatataaaat 16667455  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    | |||| ||| |||| |||||||  | ||||||||||||| ||   ||||||||||||||||||||||||    
T  16667454 acacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 16667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 27362406 - 27362575
Alignment:
Q  8 gcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaa 106  Q
    |||| |||||| ||||||||||| ||||||||||||||||||||||||||| ||| | |||||||| |||| | | |||||||||||| |||   |||||    
T  27362406 gcaacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctacatatttaatatgaaatgcacaaa 27362505  T
Q  107 ttttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctatt 176  Q
    ||  ||||||||||||| ||||||||||||||| ||   ||||||||||||||||||||||||| |||||    
T  27362506 ttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctatt 27362575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 10389437 - 10389269
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||| |||||||||   |||||||||||| ||| |||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  10389437 aacatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaaccaacaattattgattaaaagttacatatttcatataaaaaa 10389338  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
     |||| || ||||||||||||||||||| ||| || ||| ||   |||||||| ||||| ||| |||||    
T  10389337 cacaagttctaagtcaaaattactacttgaaattttttaacatgtgcaaatttacacattataaaaaaa 10389269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 48910943 - 48910803
Alignment:
Q  29 taactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 128  Q
    ||||||||||||||||||||||||||||||  |||||||||| |||||||| | ||||||||| |||||||| |||||||   ||| ||| |||||||||    
T  48910943 taactaaaagtagtaattttttattgaaaattaacaattattgattaaaagctacatatttaacataaaaaacacaaattcctagttaaagttactactt 48910844  T
Q  129 taaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||||||||||| || | ||||||||||| ||||||||||||    
T  48910843 taaacttcttaacatatgcaaatttgcatatgatagaaaaa 48910803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 54495807 - 54495637
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||| ||| | ||||||||| ||||| | |||||||||||| |||     
T  54495807 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 54495708  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  |||| ||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||    
T  54495707 gcacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 54495637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 23545484 - 23545657
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||||||||| ||||||| ||||||||||||||| |||||||  ||||||||||| |||     
T  23545484 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagttttatatttaatattaaat 23545583  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 173  Q
     ||||| ||  ||  |||||||  || ||||||||| ||| ||   ||||||||||||||||||||||||||||    
T  23545584 gtacaatttccaatacaaaatttatattttaaacttattaacatgtgcaaatttgcacatgatagaaaaactct 23545657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 62 - 170
Target Start/End: Complemental strand, 23051490 - 23051382
Alignment:
Q  62 acaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatga 161  Q
    |||||||||||||||||||| ||||||| |||||||||| |||| ||| |||||||| ||||||||||||| |||||||||   ||||||||||||||||    
T  23051490 acaattatttattaaaagttacatattttatataaaaaacacaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatga 23051391  T
Q  162 tagaaaaac 170  Q
    |||||||||    
T  23051390 tagaaaaac 23051382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 19468202 - 19468372
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||     
T  19468202 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 19468301  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||| ||  ||||||| ||| ||||||||||||| ||   |||||||||||||| ||||||||||    
T  19468302 gtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaac 19468372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 27019272 - 27019438
Alignment:
Q  5 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatac 103  Q
    ||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||  |||    
T  27019272 tgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtac 27019371  T
Q  104 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    || ||| ||  ||||||| ||| ||||||||| ||| || | |||||||||||||||||||||||||    
T  27019372 aagtttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcacatgatagaaaaac 27019438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 34941286 - 34941456
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||| |||||||||||| ||||| ||||||||||||  || ||||||||||||| |||||| |||||||| |||||||  ||||| |||| ||||     
T  34941286 aacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagttatatattaaatacaaaat 34941385  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||  ||  ||||||||||| ||||||||||||||||   ||||||| |||||||||||||||||    
T  34941386 gtacaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaattcgcacatgatagaaaaac 34941456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 47327058 - 47326890
Alignment:
Q  5 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatac 103  Q
    ||||||| |||||||||||||||| | |||||||||||||||||| |||||||| ||| | ||||||||| ||||  | |||||||||||| |||   |     
T  47327058 tgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaa 47326959  T
Q  104 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
    || ||  |||||||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||||    
T  47326958 aagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaactc 47326890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 47341854 - 47341686
Alignment:
Q  5 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatac 103  Q
    ||||||| |||||||||||||||| | |||||||||||||||||| |||||||| ||| | ||||||||| ||||  | |||||||||||| |||   |     
T  47341854 tgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaa 47341755  T
Q  104 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
    || ||  |||||||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||||    
T  47341754 aagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaactc 47341686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 170
Target Start/End: Original strand, 49181083 - 49181250
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaata 102  Q
    ||||||||||||||||||||||||  |||||||||||| ||  ||| |||||||| ||||||| ||||||| ||||||| ||||||||||||||||   |    
T  49181083 atgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatgca 49181182  T
Q  103 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||| ||  ||  |||| |||||| ||| ||||||||| ||   |||||||||||||||||||||||||    
T  49181183 caagttacaatacaaatttactattttgaacttcttaacaggtgcaaatttgcacatgatagaaaaac 49181250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 8736980 - 8736811
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||| | ||||||||| ||||||| |||||||||||| |||     
T  8736980 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaat 8736881  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      || | ||  |||||||| |||| |||||||| |||||| ||   |||||||| |||| |||||||||||    
T  8736880 gcac-agttccaagtcaaagttaccactttaaatttcttaacatgtgcaaatttacacacgatagaaaaac 8736811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 17409832 - 17410002
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||||||| ||||||||||||||| ||||  |  ||||||||||| |||     
T  17409832 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaat 17409931  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||  ||  |||| || ||| ||||||||||||||||   |||||||||||||||||||||||||    
T  17409932 gtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 17410002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 19451070 - 19450900
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||     
T  19451070 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 19450971  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||  ||  ||||||| ||| ||||||||||||| ||   |||||||||||||| ||||||||||    
T  19450970 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaac 19450900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 50352311 - 50352480
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  50352311 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 50352409  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  ||||||||||| |||||| |||||| ||   ||||||||||| |||||||||||||    
T  50352410 gttcaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcatatgatagaaaaac 50352480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 52391309 - 52391475
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaata 102  Q
    ||||| ||| ||||||||||||| |||||||| |||||||| ||||| ||||||| ||||||||||||||| |||||||  ||||||||||| |||  ||    
T  52391309 atgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatgta 52391408  T
Q  103 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||| ||  ||  ||||||| ||| ||||||||||||| ||   |||||||| |||||||||||||||    
T  52391409 caagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 52391475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 49228365 - 49228457
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaata 93  Q
    |||||||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||| || |||||| ||| |||||||||||    
T  49228365 aacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaatgttacatatttaata 49228457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 9759311 - 9759142
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  9759311 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 9759213  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   ||||||||| |||||||||||||||    
T  9759212 gttcaacttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgtacatgatagaaaaac 9759142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 39876844 - 39877008
Alignment:
Q  6 gtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaaataca 104  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||| |  |||||||  |||||| ||| ||||  | ||    
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttgatacaaaatgttca 39876942  T
Q  105 aattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | ||  ||  |||| |||||| |||||| |||||| ||   |||||||| ||||||||||||||||    
T  39876943 agttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttacacatgatagaaaaac 39877008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 24684844 - 24685012
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    ||||| ||||| ||| |||||||||| | |||||| |||||||| |||||| ||| ||| ||||||||||||||| |||||||  ||||||||||| |||    
T  24684844 aacatttgcaacattacacatgttaaaacaactaatagtagtaactttttttttggaaaacaacaattatttattcaaaagttttatatttaatattaaa 24684943  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaa 167  Q
      ||||| ||  ||  ||||||| ||| ||||||||||||| ||   ||||||||||||||||||||||    
T  24684944 tgtacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 40049567 - 40049736
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||| | |||||||||||||||| |  |||| ||  |||||||||| ||||     
T  40049567 aacatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttttatag-aaaccaacaattatttaacaaaaaattatatatttaataaaaaat 40049665  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |  || ||  ||  ||||||||||| |||||| |||||| ||   |||||||||||||| ||||||||||    
T  40049666 gttaaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcacataatagaaaaac 40049736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10658613 - 10658543
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 72  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || ||||||||| |||||||||||||||||    
T  10658613 aacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattta 10658543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10872758 - 10872688
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 72  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || ||||||||| |||||||||||||||||    
T  10872758 aacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattta 10872688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 49650223 - 49650318
Alignment:
Q  5 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||| ||||| |||||||||| ||||| |||| ||| ||||| |||||||||| | |||| ||| ||| ||||||||||||||    
T  49650223 tgtgcaatattgcacatattaaggtaactaaaagaagtaacttttcattaaaaacaaacaattattgaataaatgttacatgtttaatataaaaaa 49650318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 2096879 - 2096977
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    |||||||||||||||||||| |||||   ||||||||||   || ||||||||||||| ||||||||||||||| |||||||  |||||||||||||||    
T  2096879 aacatgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagttatatatttaatataaaa 2096977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 33632372 - 33632203
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||  |||||| || | |||||| |||||||| ||||| ||||||| ||||||||||||||| |||||||  ||||||||||| |||     
T  33632372 aacatgtgcaacattatacatgtaaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaat 33632273  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||| || |  ||||| ||| ||||||||| ||| ||   ||||||| |||||||||||||||||    
T  33632272 gtacaagtttcaa-tataaatttctattttaaactttttaacatgtgcaaattcgcacatgatagaaaaac 33632203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 6875509 - 6875621
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||| |||||||||||||||||||| | |||||||| ||||||| |||||||| |||  | |||||||||||| |||||||  | |||||||||||||     
T  6875509 aacatttgcaatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaagttataaatttaatataaaat 6875608  T
Q  100 atacaaattttaa 112  Q
    | |||| ||||||    
T  6875609 acacaagttttaa 6875621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 49228754 - 49228832
Alignment:
Q  92 tataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||||||| |||| ||  |||||||| |||||| ||||||||||||| |||  |||||||||||||||||||||||||    
T  49228754 tataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacacgtgcaaatttgcacatgatagaaaaac 49228832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 27756574 - 27756739
Alignment:
Q  5 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaataca 104  Q
    |||||||||||||||||||||||  ||||||| |||| || |||  |||| ||| || ||||||||  | |||||||   ||||||||||| || |||||    
T  27756574 tgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctatttaatatagaatataca 27756673  T
Q  105 aattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | ||| ||| |||| || |||||||||| |||||| ||   | ||||||| |||||||| ||||||    
T  27756674 agtttcaagacaaacttgctactttaaatttcttaacatttgtaaatttgtacatgataaaaaaac 27756739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 4779561 - 4779434
Alignment:
Q  46 tttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcaca 144  Q
    ||||||||||||| ||||||||||||||| |||| ||  ||||||| || ||||  || |||||| ||  ||||||| | | | ||||||||||| ||      
T  4779561 tttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttcaatgcaaaatttcaattataaacttcttaacatg 4779462  T
Q  145 agcaaatttgcacatgatagaaaaactc 172  Q
     |||||||||||||||||||||||||||    
T  4779461 tgcaaatttgcacatgatagaaaaactc 4779434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 16069375 - 16069207
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||| ||||| |  |  || |||||||||||||||||||||| |||||||||||||||||||   |  ||||||||||| |||     
T  16069375 aacatgtgcaacattgcacacgttaaaa--atcaagagtagtaattttttattgaaaaacaacaattatttattaaaaaaatttatatttaatattaaat 16069278  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||||||| ||  ||||| | ||| || |||||||||| ||   ||||||||||| |||| ||| ||||    
T  16069277 gtacaaatttcaatacaaaaattctatttaaaacttcttaacatgtgcaaatttgcatatgacagataaac 16069207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 25843299 - 25843472
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa--gttgcatatttaatataaaa 98  Q
    ||||||| ||||||   |||||||||   ||||||||||||||| ||||||||||||| ||||||  |||| ||||||   ||  |||||||||||||||    
T  25843299 aacatgtacaatataatacatgttaaagcaactaaaagtagtaactttttattgaaaaacaacaaccatttgttaaaaagcttatatatttaatataaaa 25843398  T
Q  99 aatacaaa--ttttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
       |||||  || |||| |||| |||||||||||||||| ||| ||    ||||||||||| ||||||||||||    
T  25843399 tgcacaaaagttctaagacaaagttactactttaaactttttaacatctacaaatttgcacgtgatagaaaaac 25843472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 39539472 - 39539607
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||| |||| |||||||||| ||||| | |||||  ||||||||||| |||||||| ||||| ||||||||| ||||| | |||||||||||| |||     
T  39539472 aacatgcgcaacattgcacatgctaagacatctaaacttagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatatgaaat 39539571  T
Q  100 atacaaattttaagtcaaaattactactttaaactt 135  Q
      |||| ||| |||||| | |||| | |||||||||    
T  39539572 tcacaagtttcaagtcatagttaccattttaaactt 39539607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48911004 - 48910965
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagta 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48911004 aacatgtgcaatattgcacatgttaagataactaaaagta 48910965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 170
Target Start/End: Original strand, 51691353 - 51691519
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaata 102  Q
    |||||||| ||||||||||||||   |||||||| |||||| | |||||||||||| || ||||||||||||||| | |  |||||||||  |||| |||    
T  51691353 atgtgcaacattgcacatgttaaagcaactaaaa-tagtaagtctttattgaaaactaataattatttattaaaaagctatatatttaattcaaaatata 51691451  T
Q  103 caaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||| ||  ||  |||| |||||| || ||| |||||| ||   |||||||| ||||||||||||||||    
T  51691452 caagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaatttacacatgatagaaaaac 51691519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 40681960 - 40682014
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaa 58  Q
    ||||||||||||||| ||||||||  |||||||| ||||||||||||||||||||    
T  40681960 atgtgcaatattgcatatgttaagtcaactaaaaatagtaattttttattgaaaa 40682014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3085360 - 3085433
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 74  Q
    ||||||||||| |||||||||||||| | || ||| |||||||||||||| |||||||  ||||||||| ||||    
T  3085360 aacatgtgcaacattgcacatgttaaaacaattaatagtagtaattttttcttgaaaaataacaattatatatt 3085433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24993626 - 24993549
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||||||||||||||   ||||||||  |   ||||||||||||||| ||||||| |||||||||||    
T  24993626 aacatgtgcaatattgcacatgttaaatgaactaaaaaaaacgattttttattgaaaaacaacaatcatttattaaaa 24993549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49332341 - 49332418
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||| ||||||||||| ||| |||||||| ||| |||| ||||||||  |  |||||||||||||||    
T  49332341 aacatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaaatattaattatttattaaaa 49332418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 55813920 - 55814041
Alignment:
Q  49 ttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagc 147  Q
    |||||||||| ||||||||||||||| |||||||  |||||||||| | ||  ||||||||| ||  |||||||| || ||||||||| ||| ||   ||    
T  55813920 ttattgaaaatcaacaattatttattaaaaagttatatatttaatacagaatgtacaaatttcaatacaaaattattattttaaactttttaacatgtgc 55814019  T
Q  148 aaatttgcacatgatagaaaaa 169  Q
    ||||||||| |||||| |||||    
T  55814020 aaatttgcatatgatacaaaaa 55814041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 24297392 - 24297492
Alignment:
Q  13 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaatacaaatttta 111  Q
    |||||| ||||||| | || ||| |||||||||||||| ||||||| ||||||||||||| |||||||||  ||||| | ||| |||  |||||||||||    
T  24297392 attgcatatgttaaaacaattaatagtagtaatttttttttgaaaaacaacaattatttatttaaaagttttatattaattattaaatgtacaaatttta 24297491  T
Q  112 a 112  Q
    |    
T  24297492 a 24297492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 37433007 - 37432868
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 128  Q
    |||||| |||||||| ||| | ||||||| ||||||||||||| |||||| ||  ||||||| ||| |||  ||||||||| ||  |||||||  || ||    
T  37433007 aactaatagtagtaactttgttttgaaaaacaacaattatttatttaaaaattttatatttagtattaaatgtacaaatttcaatacaaaatttttattt 37432908  T
Q  129 taaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    ||||||||||| || | |||| ||||||| | ||||||||    
T  37432907 taaacttcttaacatatgcaagtttgcacgtaatagaaaa 37432868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 13009913 - 13009848
Alignment:
Q  13 attgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||| ||||||| | ||||||||||| ||| |||||||||||||| || ||||||||| |||||    
T  13009913 attgcatatgttaaaacaactaaaagtattaagtttttattgaaaactaataattatttactaaaa 13009848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 19838859 - 19838689
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||| || |||||||||||||| | |||||| |||| ||| ||||| || |||  ||||||||||||||| |||||||  ||||||||||| |||     
T  19838859 aacatgtggaacattgcacatgttaaaacaactaatagtaataactttttttttaaa--caacaattatttattcaaaagttttatatttaatattaaat 19838762  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
     ||||| ||  ||  ||||||| ||| |||||||   ||| ||   |||||||| ||||||||| ||||||||    
T  19838761 gtacaagttccaatacaaaatttctattttaaacgggttaacatgtgcaaattttcacatgataaaaaaactc 19838689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 23438193 - 23438242
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaag 79  Q
    ||||||| ||||||| ||||||||||||| ||||||| ||||||||||||    
T  23438193 aactaaatgtagtaactttttattgaaaaacaacaataatttattaaaag 23438242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 37785001 - 37784932
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    |||||||||||| || ||||||||||||| ||| ||| ||||||| ||||||| ||||||||| ||||||    
T  37785001 aactaaaagtagcaactttttattgaaaaacaataatcatttattaaaaagttacatatttaacataaaa 37784932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 36971326 - 36971454
Alignment:
Q  45 ttttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcac 143  Q
    |||||||||||||| ||||||  ||||||| ||||  | ||||||||||||||||   |||| ||| |||  ||| |||||| |||||| |||||| ||     
T  36971326 ttttttattgaaaaacaacaaaaatttatttaaaggctacatatttaatataaaatgaacaagtttcaagataaagttactattttaaatttcttaacat 36971425  T
Q  144 aagcaaatttgcacatgatagaaaaactc 172  Q
      | |||||||||| ||||||||||||||    
T  36971426 gcgtaaatttgcacttgatagaaaaactc 36971454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 38222323 - 38222415
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaattttaagtcaaaatt 121  Q
    |||||||||||  || |||||| |||||| ||||||||||||||| |||| ||  |||||||||||||||   |||||||||||  |||||||    
T  38222323 aactaaaagtaacaaatttttagtgaaaatcaacaattatttattaaaaaattatatatttaatataaaatccacaaattttaatacaaaatt 38222415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 18882322 - 18882267
Alignment:
Q  115 caaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  18882322 caaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 18882267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 42480086 - 42480015
Alignment:
Q  7 tgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||| ||||   |||||| ||||| ||  |||||||||||| || ||||||||||||||||    
T  42480086 tgcaatattgcacatcttaaagcaactaagagtagcaacattttattgaaaaacatcaattatttattaaaa 42480015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3728257 - 3728315
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaa-ttttttattgaaaa 58  Q
    ||||||| |||||||| ||||||||  | ||||||||||||||| ||||||||||||||    
T  3728257 aacatgtacaatattgaacatgttataacaactaaaagtagtaacttttttattgaaaa 3728315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 35645127 - 35645073
Alignment:
Q  45 ttttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaa 98  Q
    ||||||||||||||  |||||||||||||| |||||||  |||||||||||||||    
T  35645127 ttttttattgaaaaataacaattatttattaaaaagttatatatttaatataaaa 35645073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36968296 - 36968338
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagta 43  Q
    ||||||||||||||| ||||||||||  |||||||||||||||    
T  36968296 aacatgtgcaatattacacatgttaaagtaactaaaagtagta 36968338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 49250502 - 49250444
Alignment:
Q  3 catgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaacca 61  Q
    |||||||||||||||||||||||| |  |||||||| || || |||||||| |||||||    
T  49250502 catgtgcaatattgcacatgttaataatactaaaagaagcaactttttattaaaaacca 49250444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 1378066 - 1378197
Alignment:
Q  40 agtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttctt 138  Q
    |||||||| ||||||||||| | |||||||||||||||| |||  ||||||||||| |||  ||||| ||| |||  ||| |||| | |||||| |||||    
T  1378066 agtaatttgttattgaaaac-atcaattatttattaaaatgttatatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttctt 1378164  T
Q  139 atcacaagcaaatttgcacatgatagaaaaactc 172  Q
    | ||   ||||||| |||| ||||||||||||||    
T  1378165 aacatgtgcaaatt-gcacctgatagaaaaactc 1378197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 13094 - 13263
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| || |||||||| | ||||||||||||||||||    
T  13094 aacatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaa 13193  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     |||||||  || | ||| |||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  13194 cacaaattccaaattaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 13263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 8e-46; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 10887037 - 10887210
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | ||||||||||||||||     
T  10887037 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatataaaat 10887136  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactct 173  Q
    | |||| ||  || |||||||||| ||||||||||||||| ||   ||||||||||||||||||||||||||||    
T  10887137 acacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaactct 10887210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 31069738 - 31069583
Alignment:
Q  14 ttgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaag 113  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| |||| ||  |||    
T  31069738 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaagttccaag 31069639  T
Q  114 tcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||||| |||||| ||||||||||||| ||   | ||||||||||||||||||||||    
T  31069638 tcaaagttactaatttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 31069583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 2830850 - 2830681
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||| || |||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  2830850 aacatgtacagtattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 2830751  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||||| ||| | ||| ||| || ||||||||||||| ||   ||||||||| |||||||||||||||    
T  2830750 cacaaattctaaattaaagttattattttaaacttcttaacatgtgcaaatttgtacatgatagaaaaac 2830681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 5363062 - 5362925
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||| || |||||||| | ||||||||||||||||||    
T  5363062 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaa 5362963  T
Q  101 tacaaattttaagtcaaaattactactttaaacttctt 138  Q
     |||| ||  |||| ||| |||||||||||||||||||    
T  5362962 cacaagttccaagttaaagttactactttaaacttctt 5362925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 22974731 - 22974604
Alignment:
Q  12 tattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaatttta 111  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||||||| |||||||||||||||||| |||| ||  |    
T  22974731 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttcca 22974632  T
Q  112 agtcaaaattactactttaaacttctta 139  Q
    ||| ||| |||||| |||||||||||||    
T  22974631 agttaaagttactattttaaacttctta 22974604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 23813670 - 23813797
Alignment:
Q  12 tattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaatttta 111  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||||||| |||||||||||||||||| |||| ||  |    
T  23813670 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttcca 23813769  T
Q  112 agtcaaaattactactttaaacttctta 139  Q
    ||| ||| |||||| |||||||||||||    
T  23813770 agttaaagttactattttaaacttctta 23813797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 1017948 - 1017809
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||| |||||||| | | ||||||||||||||||| ||||  ||||||||||||||||||||||| |||| || ||||||||||||||||     
T  1017948 aacatgtgcaatactgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttacatatttaatataaaat 1017849  T
Q  100 atacaaattttaagtcaaaattactactttaaacttctta 139  Q
      |||| ||| |||||||| ||||||||||||||||||||    
T  1017848 gcacaactttcaagtcaaagttactactttaaacttctta 1017809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 18332858 - 18332688
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||| |  ||||||||||| |||     
T  18332858 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctatatatttaatatgaaat 18332759  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      | || ||  ||||||||||||  ||||||||||||||| ||   | |||||||||||||||||||||||    
T  18332758 gcataagttccaagtcaaaattatcactttaaacttcttaacatgtgaaaatttgcacatgatagaaaaac 18332688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6016864 - 6017033
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||| ||||| | ||||||||||||| |||| |||||||| ||||| |||||| || |||||||  ||||||||||| |||     
T  6016864 aacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagttatatatttaatatgaaat 6016963  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
      |||| ||  |||||||| |||| ||||||||||| ||| ||   ||||||||||||||||||||||||    
T  6016964 gcacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 6017033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 8977636 - 8977467
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||  |||||||||||| ||  ||| |||||||| ||||||| ||||||| ||||||| ||||||||||||||||     
T  8977636 aacatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaat 8977537  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
      |||| ||  ||  |||| |||||| ||| ||||||||| ||   |||||||| |||||||||||||||    
T  8977536 gcacaagttacaatacaaatttactattttgaacttcttaacaagtgcaaatttacacatgatagaaaaa 8977467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 31568121 - 31568287
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    |||| |||||||||||||||||||||| |||  || |||||    ||||||||||||| |||||||| |||||| ||||| | |||||||| ||||||||    
T  31568121 aacacgtgcaatattgcacatgttaaggtaatcaagagtagc---tttttattgaaaatcaacaatt-tttattcaaaagctacatatttattataaaaa 31568216  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | |||| ||| || ||||| |||||||||||||||| ||| ||   |||||||||||||||||||||||||    
T  31568217 acacaagtttcaaatcaaagttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaac 31568287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 28943938 - 28943764
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||| ||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  28943938 aacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 28943840  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctat 175  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   ||||||||||||||||||||||||| ||||    
T  28943839 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctat 28943764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 14228295 - 14228126
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||| ||||||||| || ||||||||| |||||||||||||||| |  |||||||  |||||||||| ||||     
T  14228295 aacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 14228197  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  |||| |||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  14228196 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 14228126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 34692362 - 34692532
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| | | ||||||||| |||||||||  ||||||||||| |||     
T  34692362 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 34692461  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     ||||| ||  ||  ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  34692462 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 34692532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 30623334 - 30623473
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| ||| |||||||||| | |||||| |||||||| ||||| ||||||| ||||||||||||||| |||||||  ||||||||||| |||     
T  30623334 aacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatcaaat 30623433  T
Q  100 atacaaattttaagtcaaaattactactttaaacttctta 139  Q
     ||||| ||| ||  ||||||| ||| |||||||||||||    
T  30623434 gtacaagtttcaatacaaaatttctattttaaacttctta 30623473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 17552756 - 17552587
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattt-attaaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||| | |||||||||||||||| |  |||| ||  |||||||||| ||||     
T  17552756 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatcg-aaaccaacaattatttaacaaaaaattatatatttaatacaaaat 17552658  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | ||| ||  ||  || |||||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  17552657 gttcaagttccaatgcataattactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 17552587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26602600 - 26602523
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||||| | |||||||||||||||| |||||||||    
T  26602600 aacatgtgcaatattgcacatattaaggaaactaaaagtagtaatttttcactgaaaaccaacaattaattattaaaa 26602523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 17596385 - 17596519
Alignment:
Q  36 aagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaaact 134  Q
    ||||||||| |||||||||||| |||||||||| ||||||||| | | |||| |||||||||||   |||| ||  || ||||| |||||||||||||||    
T  17596385 aagtagtaactttttattgaaa-ccaacaattaattattaaaaatctacatagttaatataaaatgcacaagttccaaatcaaagttactactttaaact 17596483  T
Q  135 tcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||||||    ||||||||||||||||||||||||    
T  17596484 tcttatcatgtacaaatttgcacatgatagaaaaac 17596519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 27819796 - 27819627
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaa--ttttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaa 100  Q
    |||||||||||||||||| ||||   |||||||| || |||  ||||||||||||||||||||   ||||||||||| ||| |||||||| |||||||      
T  27819796 atgtgcaatattgcacatattaaagcaactaaaaatattaacattttttattgaaaaccaacatcaatttattaaaaagttacatatttagtataaaatg 27819697  T
Q  101 tacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
     | || ||||||| ||||| ||| | ||||||||||||| ||   ||||||||| |||||||||||||||    
T  27819696 aataagttttaagacaaaaatacaattttaaacttcttaacatgtgcaaatttgtacatgatagaaaaac 27819627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 31169929 - 31169763
Alignment:
Q  5 tgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatac 103  Q
    |||||||  ||||||||||||||   ||||||| |||||||||||  ||||||||||| ||||| ||||| ||||  | ||||||||||||||||   ||    
T  31169929 tgtgcaaacttgcacatgttaaggctactaaaaatagtaatttttctttgaaaaccaataattaattattaaaaacctacatatttaatataaaatgcac 31169830  T
Q  104 aaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    || ||  |||||||| ||||||||||||| || ||| ||   |||||||| ||||||||||||||||    
T  31169829 aagttccaagtcaaagttactactttaaatttgttaacatgtgcaaatttacacatgatagaaaaac 31169763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 33017733 - 33017803
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 72  Q
    ||||||||||||||||||||||||||| ||||||||| ||| || |||||||| ||||||||||||||||||    
T  33017733 aacatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttatt-aaaaccaacaattattta 33017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12454074 - 12454132
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaac 59  Q
    |||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  12454074 aacatgtgcaatattgcacatgttaagaaaattaaatgtagtaattttttattgaaaac 12454132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 168
Target Start/End: Original strand, 17141315 - 17141451
Alignment:
Q  33 taaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaa 131  Q
    |||||||||| | |||||||| |||| ||||||| ||||||||||| | | ||||||||||||||||    ||| || |||| |||||||||||  ||||    
T  17141315 taaaagtagttactttttattaaaaaacaacaataatttattaaaaagctacatatttaatataaaatgagcaagttctaagacaaaattactatcttaa 17141414  T
Q  132 acttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    || ||||| || | |||||||||||||||||| ||||    
T  17141415 acatcttaacatatgcaaatttgcacatgataaaaaa 17141451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 29863472 - 29863302
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||   |||||||| |||||| |||  ||||||||  || ||||||||||| |||||||  ||| |||||||||||     
T  29863472 aacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaagttttatagttaatataaaat 29863373  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      | || ||   |  |||  |||||| ||||||||||||| ||   |||||||||||||||||||||||||    
T  29863372 gcaaaagttccgacacaattttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 29863302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 30591320 - 30591162
Alignment:
Q  14 ttgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttat-taaaagttgcatatttaatataaaaaatacaaattttaa 112  Q
    |||||||||||||   ||||||| ||||||| |||||||||||||   ||||||||||||  |||||||  | |||||||| |||| |||||| ||  ||    
T  30591320 ttgcacatgttaacgcaactaaatgtagtaagtttttattgaaaaaatacaattatttatcaaaaagttatacatttaatacaaaatatacaagttacaa 30591221  T
Q  113 gtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaact 171  Q
      ||||||||| | || |||||||||| ||   | ||||||||||||||||||||||||    
T  30591220 tgcaaaattaccatttaaaacttcttaacatgtgtaaatttgcacatgatagaaaaact 30591162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 3850577 - 3850654
Alignment:
Q  18 acatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatata 95  Q
    ||||||||||  |||||||||||| || |||| |||||||| ||| ||||||| |||||||||| |||||||||||||    
T  3850577 acatgttaaggcaactaaaagtagcaacttttcattgaaaatcaataattattcattaaaagttacatatttaatata 3850654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17596321 - 17596370
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaatttttt 50  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  17596321 aacatgtgcaatattgcacatgttaagacaactaaaagtagtaacttttt 17596370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 31791086 - 31790917
Alignment:
Q  1 aacatgtgcaatattgcacatgtt-aagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa-gttgcatatttaatataaaa 98  Q
    |||||||||||||||||||||||| |||  ||||||| ||||||| ||||||||||||| ||  ||||| ||||||||| ||| | ||||||||||| ||    
T  31791086 aacatgtgcaatattgcacatgttaaaggaaactaaatgtagtaactttttattgaaaaacactaatta-ttattaaaacgtttcctatttaatatagaa 31790988  T
Q  99 aatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
     | | || ||| ||| |||| || | | |||||| ||||||  |   ||||||||||| ||||||||||||    
T  31790987 tacataagtttcaagacaaacttgccattttaaatttcttaatatgtgcaaatttgcatatgatagaaaaa 31790917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 32615632 - 32615540
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaag---tagtaattttttattgaaaaccaacaattatttattaaaagttgcatattta 90  Q
    |||||||| ||||||||| |||||||| ||||||||||   |||||| |||| |||||||| || |||||||| |||||||| | ||||||||    
T  32615632 aacatgtgtaatattgcatatgttaaggtaactaaaagtactagtaacttttcattgaaaatcatcaattattgattaaaagctacatattta 32615540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 2086998 - 2086949
Alignment:
Q  8 gcaatattgcacatgttaagataactaaaagtagtaattttttattgaaa 57  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  2086998 gcaatattgcacatgttaaggtaattaaaagtagtaatttttcattgaaa 2086949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 3853062 - 3853121
Alignment:
Q  111 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    |||||||| ||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  3853062 aagtcaaagttactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 3853121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 4371850 - 4372019
Alignment:
Q  4 atgtgcaatattgcacatgttaagataactaaaagtagtaatt-ttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaat 101  Q
    |||||||| |||| ||||||||| | |||||| |||| ||||| |||| ||| ||| ||||||||||||||| |||||||  || |||||||| |||  |    
T  4371850 atgtgcaacattgtacatgttaaaacaactaatagtaataattatttttttggaaaacaacaattatttattcaaaagttttatctttaatattaaatgt 4371949  T
Q  102 acaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
     | || || ||  ||||||| ||| ||||||||||||| ||   | |||||||| ||||||||||||||||    
T  4371950 gc-aagttcaatacaaaatttctattttaaacttcttaacatgtgtaaatttgcgcatgatagaaaaactc 4372019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24979319 - 24979246
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt 74  Q
    ||||||||||| |||||||||||||| | |||||| | |||||| ||||| ||||||| | || ||||||||||    
T  24979319 aacatgtgcaacattgcacatgttaaaacaactaataatagtaactttttcttgaaaaacgacgattatttatt 24979246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31039712 - 31039789
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaa 78  Q
    |||||||  |||||||||| ||||||  ||| ||||| |||||| | ||||||||||| ||| |||||||||||||||    
T  31039712 aacatgtttaatattgcacgtgttaaagtaattaaaaatagtaactatttattgaaaaacaaaaattatttattaaaa 31039789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1814951 - 1814881
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta 72  Q
    ||||||||||||||||||||||||||   |||||||||||  |  ||||||||||||| ||| |||||||||    
T  1814951 aacatgtgcaatattgcacatgttaaagcaactaaaagtaacatatttttattgaaaa-caataattattta 1814881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 34300379 - 34300493
Alignment:
Q  9 caatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaaatacaaat 107  Q
    ||||||||||||| ||||   || ||||||| |||| |||| || ||||| ||| ||||||||||| ||||| | |||||||||||||||||| ||| ||    
T  34300379 caatattgcacatattaaaccaattaaaagtggtaacttttgat-gaaaatcaataattatttatttaaaagctacatatttaatataaaaaacacatat 34300477  T
Q  108 tttaagtcaaaattac 123  Q
    || || ||||| ||||    
T  34300478 ttcaaatcaaagttac 34300493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 26602513 - 26602480
Alignment:
Q  109 ttaagtcaaaattactactttaaacttcttatca 142  Q
    |||||||||| |||||||||||||||||||||||    
T  26602513 ttaagtcaaagttactactttaaacttcttatca 26602480  T

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Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 29730318 - 29730383
Alignment:
Q  33 taaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaa 97  Q
    ||||| || ||| ||||||||||||| ||||| ||||||||| |||||||  ||||||||||||||    
T  29730318 taaaattaataagtttttattgaaaaacaacagttatttattaaaaagttatatatttaatataaa 29730383  T

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Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 16540696 - 16540752
Alignment:
Q  84 atatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttat 140  Q
    ||||||||||||||| |||||||||||||   ||| |||| | ||||||||||||||    
T  16540696 atatttaatataaaatatacaaattttaatataaacttacgattttaaacttcttat 16540752  T

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Target: scaffold0111 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 37284 - 37114
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||| ||||| | |||||||||||| |||     
T  37284 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 37185  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
      |||| ||  |||||||| |||  ||||||||||||||| ||   |||||||||||||||||||||||||    
T  37184 gcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 37114  T

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Target: scaffold0111; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 41105 - 41170
Alignment:
Q  115 caaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactctattatta 180  Q
    |||||||| || ||||||||||||| || |  ||||||| ||||||||||||||||||||||||||    
T  41105 caaaattattattttaaacttcttaacatatacaaatttacacatgatagaaaaactctattatta 41170  T

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Target: scaffold0018 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 182080 - 182220
Alignment:
Q  29 taactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactt 128  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||| ||| || || ||  ||||||||    
T  182080 taaccaaaagtagtaattttttattgaaaacaaacaattatttattaaaagttacatatttaatataaaaaacacaagtttcaaatc-aacgtactactt 182178  T
Q  129 taaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    ||||||||||| ||    ||||||| ||||||||||||||||    
T  182179 taaacttcttaacatgtacaaatttacacatgatagaaaaac 182220  T

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Target: scaffold0009 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 43479 - 43641
Alignment:
Q  8 gcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaat 107  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||  ||||||||||||||||||| || |    
T  43479 gcaatattgcacgtgttaaggtaa-taaaagtagtaatttttcattgaaaatcaacaattattaattaaaagttatatatttaatataaaaaatataagt 43577  T
Q  108 tttaagtcaaaattactacttt--aaacttcttatcacaagcaaatttgcacatgatagaaaaa 169  Q
    ||||||| ||| ||| | ||||  |||||||||| || |  ||||||||||||||||| |||||    
T  43578 tttaagttaaagttattgctttaaaaacttcttaacatattcaaatttgcacatgataaaaaaa 43641  T

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Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 191454 - 191386
Alignment:
Q  30 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatatttaatataaaa 98  Q
    |||||||||| ||||||||| |||||||||   | |||||||||||||| ||  |||||||||||||||    
T  191454 aactaaaagtggtaatttttcattgaaaacatccgattatttattaaaaattatatatttaatataaaa 191386  T

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Target: scaffold0155 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 3572 - 3413
Alignment:
Q  12 tattgcacatgttaagataactaaaagtagtaatttttt-attgaaaaccaacaattatttattaaaagttgcatatttaatataaaaaatacaaatttt 110  Q
    |||||||||||||||  |||||||||||||||| ||||| ||| |||||||||||||||| |||||||||| |||||||||||||||||| | || ||      
T  3572 tattgcacatgttaatgtaactaaaagtagtaactttttcattaaaaaccaacaattattgattaaaagttacatatttaatataaaaaacataagttcc 3473  T
Q  111 aagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    || | ||| | ||||||||||||||||||  |   |||||||| ||||||||||||||||    
T  3472 aatttaaagtaactactttaaacttcttaatatgtgcaaatttacacatgatagaaaaac 3413  T

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Target: scaffold0618 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 168
Target Start/End: Complemental strand, 8564 - 8416
Alignment:
Q  20 atgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagt-tgcatatttaatataaaaaatacaaattttaagtcaaa 118  Q
    ||||||| | ||| ||||||| |||||||||||||||||| ||||||||||||||||||   | || |||||||||||||   |||| || ||| |||||    
T  8564 atgttaaaacaacgaaaagtattaattttttattgaaaac-aacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaa 8466  T
Q  119 attactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
     ||||||||||||| |||||| || | |||||||| ||||||||||||||    
T  8465 gttactactttaaatttcttaacatatgcaaatttacacatgatagaaaa 8416  T

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Target: scaffold0036 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 94188 - 94016
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttgcatatttaatataaaaa 99  Q
    ||||| ||||| ||||||||||||||   ||||||||||||||| |||||||||||||| || ||||||||||| ||||  |  |||||||||| ||||     
T  94188 aacatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaaactatatatttaatacaaaat 94089  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
     || || ||  ||   ||| ||| || || |||||||||| || | |||||||||||||||||||||||||||    
T  94088 gtataagttccaatgtaaagttagtatttaaaacttcttaacatatgcaaatttgcacatgatagaaaaactc 94016  T

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Target: scaffold0305 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 18134 - 17994
Alignment:
Q  33 taaaagtagtaattttttattgaaaaccaacaattatttatta-aaagttgcatatttaatataaaaaatacaaattttaagtcaaaattactactttaa 131  Q
    |||||||||||| | || ||| |||| |||||||||||||||| ||||||  |||||||||||||||  ||||||||  ||  ||||  ||||| ||| |    
T  18134 taaaagtagtaactcttaattaaaaaacaacaattatttattagaaagttatatatttaatataaaatgtacaaattccaatacaaacatactattttga 18035  T
Q  132 acttcttatcacaagcaaatttgcacatgatagaaaaactc 172  Q
    || | ||| |||  ||||||||||| |||||||||||||||    
T  18034 acattttaacacgtgcaaatttgcatatgatagaaaaactc 17994  T

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Target: scaffold0149 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22468 - 22549
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataact--aaaagtagtaa--ttttttattgaaaaccaacaattatttattaaaa 78  Q
    ||||||||||||||||||||||||||   ||||  |||||||||||  |||||||||||||| || ||||||||||||||||    
T  22468 aacatgtgcaatattgcacatgttaaatcaactaaaaaagtagtaattttttttattgaaaaacatcaattatttattaaaa 22549  T

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Target: scaffold0129 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 13828 - 13734
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattattta-ttaaaagttgcatatttaatat 94  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| ||||| ||| ||| ||| | ||||||| |||||||||  |||||||||||    
T  13828 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaaaagttatttatttaaaagttttatatttaatat 13734  T

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Target: scaffold0073 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 16704 - 16535
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttgcatat-ttaatataaaaa 99  Q
    ||||| ||||| |||||| |||||||  ||||||||||  | || | ||||||| ||| ||||||||||||||||||| ||  |||| |||||| ||||     
T  16704 aacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatt-tatatattaatagaaaat 16606  T
Q  100 atacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaac 170  Q
    | |||| ||  || |||||  || |||||||||||||||| ||   |||||||||||||||||| ||||||    
T  16605 acacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatttgcacatgatataaaaac 16535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 1529 - 1445
Alignment:
Q  84 atatttaatataaaaaatacaaattttaagtcaaaattactactttaaacttcttatcacaagcaaatttgcacatgatagaaaa 168  Q
    |||||||||||||||   ||||||||||||  |||||||||  ||||||||||||| ||   |||||||||||||||||| ||||    
T  1529 atatttaatataaaatgaacaaattttaagataaaattactcttttaaacttcttaacatgtgcaaatttgcacatgataaaaaa 1445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 450 - 499
Alignment:
Q  1 aacatgtgcaatattgcacatgttaagataactaaaagtagtaatttttt 50  Q
    ||||||||||||||||||||||||||   |||||||||||||| ||||||    
T  450 aacatgtgcaatattgcacatgttaaatcaactaaaagtagtactttttt 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 44431 - 44373
Alignment:
Q  17 cacatgttaagataactaaaagtagtaattttttattgaaaaccaacaattatttattaaa 77  Q
    |||||||||| | || |||||||||||| |||||||||||||  || ||||||||||||||    
T  44431 cacatgttaaaacaattaaaagtagtaaatttttattgaaaa--aataattatttattaaa 44373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 45548 - 45496
Alignment:
Q  119 attactactttaaacttcttatcacaagcaaatttgcacatgatagaaaaact 171  Q
    ||||||| ||||||||||||  || | | ||||||||||||||||||||||||    
T  45548 attactattttaaacttctttacatatgtaaatttgcacatgatagaaaaact 45496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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