View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0808_low_20 (Length: 386)

Name: NF0808_low_20
Description: NF0808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0808_low_20
NF0808_low_20
[»] chr7 (74 HSPs)
chr7 (19-358)||(39273032-39273371)
chr7 (38-242)||(1848103-1848307)
chr7 (19-259)||(2563820-2564060)
chr7 (50-249)||(3329544-3329745)
chr7 (19-244)||(8978862-8979088)
chr7 (26-259)||(8053926-8054155)
chr7 (19-259)||(16365707-16365948)
chr7 (26-245)||(20582275-20582491)
chr7 (125-266)||(13759823-13759964)
chr7 (40-239)||(16058910-16059099)
chr7 (38-261)||(3734596-3734819)
chr7 (26-238)||(11803103-11803304)
chr7 (50-259)||(18368866-18369077)
chr7 (63-237)||(7492163-7492338)
chr7 (19-113)||(4785990-4786083)
chr7 (130-259)||(8054458-8054586)
chr7 (40-245)||(6042477-6042672)
chr7 (40-241)||(8877441-8877643)
chr7 (163-259)||(9864327-9864423)
chr7 (162-245)||(31492946-31493029)
chr7 (163-249)||(5530033-5530119)
chr7 (177-259)||(23099967-23100049)
chr7 (40-113)||(5108714-5108787)
chr7 (163-244)||(9916583-9916664)
chr7 (163-244)||(9924495-9924576)
chr7 (52-249)||(17077140-17077325)
chr7 (187-259)||(9574409-9574481)
chr7 (40-241)||(13418553-13418743)
chr7 (187-245)||(7318289-7318347)
chr7 (41-87)||(7397316-7397362)
chr7 (137-239)||(13277525-13277627)
chr7 (187-245)||(17153179-17153237)
chr7 (52-259)||(9731516-9731724)
chr7 (139-239)||(4449002-4449102)
chr7 (161-259)||(11221163-11221261)
chr7 (54-108)||(17153045-17153098)
chr7 (202-243)||(5797529-5797570)
chr7 (187-244)||(8313420-8313477)
chr7 (162-259)||(10587024-10587121)
chr7 (19-100)||(4819002-4819084)
chr7 (40-100)||(9131073-9131132)
chr7 (163-259)||(10584487-10584583)
chr7 (189-245)||(10937618-10937674)
chr7 (32-92)||(13289288-13289348)
chr7 (53-141)||(16297724-16297810)
chr7 (163-259)||(18495375-18495471)
chr7 (40-108)||(18662595-18662661)
chr7 (162-245)||(15869611-15869694)
chr7 (163-238)||(18467474-18467549)
chr7 (162-244)||(1584561-1584642)
chr7 (178-244)||(2350763-2350829)
chr7 (177-259)||(5108568-5108649)
chr7 (163-245)||(9245197-9245279)
chr7 (163-245)||(9261220-9261302)
chr7 (163-249)||(18449254-18449340)
chr7 (163-245)||(18662457-18662539)
chr7 (162-238)||(1872808-1872884)
chr7 (207-259)||(9890185-9890237)
chr7 (19-91)||(15869765-15869837)
chr7 (177-244)||(16297835-16297902)
chr7 (163-245)||(4579114-4579195)
chr7 (40-117)||(4449113-4449189)
chr7 (162-259)||(4986557-4986654)
chr7 (162-259)||(4990655-4990752)
chr7 (40-116)||(5797656-5797731)
chr7 (163-249)||(9130918-9131005)
chr7 (187-244)||(9500461-9500518)
chr7 (45-126)||(17191096-17191177)
chr7 (160-249)||(17203036-17203124)
chr7 (51-92)||(22067128-22067168)
chr7 (191-259)||(2453735-2453802)
chr7 (187-243)||(4785854-4785910)
chr7 (187-243)||(4818854-4818910)
chr7 (199-259)||(26134785-26134844)
[»] chr4 (45 HSPs)
chr4 (19-268)||(13908847-13909097)
chr4 (19-259)||(15164769-15165009)
chr4 (19-244)||(7582314-7582540)
chr4 (79-257)||(16730316-16730494)
chr4 (31-244)||(19562043-19562260)
chr4 (50-245)||(17216833-17217031)
chr4 (19-259)||(19492568-19492797)
chr4 (19-268)||(17709750-17709996)
chr4 (40-259)||(13692558-13692766)
chr4 (40-243)||(17337012-17337216)
chr4 (160-259)||(21323873-21323972)
chr4 (40-224)||(17026221-17026394)
chr4 (141-259)||(11490534-11490648)
chr4 (19-108)||(24639318-24639406)
chr4 (58-259)||(13128768-13128971)
chr4 (165-261)||(13992879-13992975)
chr4 (163-259)||(20315002-20315098)
chr4 (162-259)||(17672004-17672101)
chr4 (163-259)||(11700571-11700666)
chr4 (162-259)||(20829739-20829835)
chr4 (40-92)||(12406580-12406632)
chr4 (163-259)||(19882642-19882738)
chr4 (40-239)||(25097856-25098043)
chr4 (162-244)||(12578266-12578348)
chr4 (162-259)||(5679207-5679304)
chr4 (162-259)||(14648897-14648993)
chr4 (163-260)||(23080342-23080439)
chr4 (174-243)||(24639466-24639535)
chr4 (40-113)||(25121104-25121175)
chr4 (139-224)||(12406666-12406753)
chr4 (163-261)||(22357533-22357634)
chr4 (162-244)||(19929675-19929757)
chr4 (163-245)||(25121227-25121308)
chr4 (187-249)||(43941812-43941874)
chr4 (187-244)||(17275833-17275890)
chr4 (182-259)||(19092297-19092374)
chr4 (26-82)||(11935237-11935293)
chr4 (170-245)||(15047144-15047219)
chr4 (170-245)||(15107205-15107280)
chr4 (50-113)||(40227925-40227988)
chr4 (191-249)||(22218630-22218687)
chr4 (163-245)||(22526380-22526462)
chr4 (162-259)||(8969722-8969818)
chr4 (195-259)||(19900582-19900645)
chr4 (195-259)||(22175995-22176059)
[»] chr1 (51 HSPs)
chr1 (50-259)||(17610143-17610353)
chr1 (23-259)||(12208603-12208840)
chr1 (40-259)||(15543844-15544063)
chr1 (19-259)||(21449091-21449320)
chr1 (50-245)||(25405518-25405713)
chr1 (19-259)||(17359164-17359404)
chr1 (50-258)||(16179010-16179218)
chr1 (40-259)||(18736129-18736337)
chr1 (25-258)||(9401511-9401742)
chr1 (38-259)||(29242521-29242730)
chr1 (19-259)||(31235905-31236145)
chr1 (40-241)||(21666486-21666687)
chr1 (41-249)||(16069440-16069638)
chr1 (41-244)||(21987872-21988064)
chr1 (40-241)||(22622910-22623112)
chr1 (40-244)||(16916823-16917016)
chr1 (163-259)||(13345337-13345433)
chr1 (40-239)||(14781743-14781930)
chr1 (160-245)||(16787724-16787809)
chr1 (140-239)||(727489-727588)
chr1 (140-239)||(24054001-24054099)
chr1 (135-241)||(18825675-18825781)
chr1 (50-108)||(25403978-25404036)
chr1 (163-259)||(3591654-3591750)
chr1 (39-83)||(17121377-17121421)
chr1 (50-109)||(18529079-18529137)
chr1 (38-83)||(28008283-28008328)
chr1 (163-259)||(17837519-17837615)
chr1 (19-91)||(21334574-21334646)
chr1 (187-259)||(23038037-23038108)
chr1 (141-244)||(14779582-14779684)
chr1 (162-245)||(24214560-24214643)
chr1 (162-245)||(24281293-24281376)
chr1 (161-236)||(51473875-51473950)
chr1 (135-241)||(18830501-18830607)
chr1 (177-259)||(21847636-21847717)
chr1 (203-245)||(24306346-24306388)
chr1 (187-244)||(9787904-9787961)
chr1 (53-108)||(9787769-9787823)
chr1 (54-141)||(18100905-18100989)
chr1 (53-91)||(21973097-21973134)
chr1 (203-245)||(34480985-34481027)
chr1 (182-244)||(44795386-44795447)
chr1 (204-245)||(22664222-22664263)
chr1 (139-239)||(23179819-23179920)
chr1 (187-244)||(24267807-24267864)
chr1 (164-245)||(27117720-27117801)
chr1 (51-83)||(22664385-22664417)
chr1 (40-84)||(23179962-23180006)
chr1 (203-259)||(26540898-26540953)
chr1 (50-82)||(33190856-33190888)
[»] chr2 (40 HSPs)
chr2 (19-259)||(17743333-17743573)
chr2 (19-259)||(27908975-27909216)
chr2 (40-259)||(29719109-29719328)
chr2 (19-243)||(28925539-28925764)
chr2 (55-259)||(31804791-31804997)
chr2 (25-244)||(15339255-15339475)
chr2 (19-256)||(17349362-17349591)
chr2 (40-244)||(30411695-30411889)
chr2 (43-245)||(25196026-25196229)
chr2 (141-239)||(24090905-24091003)
chr2 (27-239)||(29142983-29143184)
chr2 (51-261)||(32085463-32085673)
chr2 (19-245)||(17635631-17635858)
chr2 (19-245)||(17675485-17675713)
chr2 (40-243)||(25618574-25618777)
chr2 (40-113)||(26603237-26603309)
chr2 (161-259)||(45621880-45621978)
chr2 (162-259)||(20174635-20174732)
chr2 (40-108)||(17198010-17198078)
chr2 (40-239)||(25535296-25535483)
chr2 (189-259)||(25888247-25888317)
chr2 (40-92)||(26667464-26667516)
chr2 (64-245)||(11382654-11382836)
chr2 (161-244)||(12953293-12953376)
chr2 (40-127)||(25530571-25530657)
chr2 (60-224)||(25920303-25920455)
chr2 (195-259)||(8447083-8447146)
chr2 (44-108)||(12953225-12953289)
chr2 (40-92)||(24090816-24090867)
chr2 (162-245)||(29027512-29027595)
chr2 (166-249)||(30900848-30900931)
chr2 (19-113)||(25887760-25887853)
chr2 (161-243)||(9774334-9774414)
chr2 (162-245)||(25885460-25885542)
chr2 (160-259)||(26603348-26603447)
chr2 (195-259)||(8503103-8503167)
chr2 (163-259)||(23011764-23011859)
chr2 (203-239)||(25530469-25530505)
chr2 (162-238)||(27418389-27418465)
chr2 (163-259)||(45553132-45553228)
[»] chr8 (34 HSPs)
chr8 (45-259)||(29382243-29382458)
chr8 (19-259)||(24114140-24114379)
chr8 (19-259)||(24269600-24269839)
chr8 (55-238)||(27659468-27659642)
chr8 (40-244)||(13314869-13315074)
chr8 (59-241)||(17509266-17509447)
chr8 (54-244)||(18448433-18448624)
chr8 (50-245)||(17101792-17101976)
chr8 (19-165)||(24110526-24110670)
chr8 (124-259)||(25226138-25226272)
chr8 (32-239)||(23893083-23893278)
chr8 (163-259)||(5850943-5851039)
chr8 (40-108)||(26394576-26394643)
chr8 (182-245)||(14528165-14528228)
chr8 (187-249)||(2637610-2637672)
chr8 (195-245)||(30783774-30783824)
chr8 (50-100)||(14626191-14626241)
chr8 (51-113)||(25182316-25182377)
chr8 (163-244)||(14075611-14075692)
chr8 (164-249)||(15238811-15238896)
chr8 (56-239)||(19264064-19264237)
chr8 (146-259)||(6884960-6885069)
chr8 (187-244)||(17976636-17976693)
chr8 (32-113)||(18569204-18569284)
chr8 (60-113)||(24644989-24645042)
chr8 (153-221)||(16403952-16404020)
chr8 (40-108)||(16404055-16404122)
chr8 (182-245)||(34497131-34497194)
chr8 (42-108)||(44010903-44010968)
chr8 (187-245)||(44011049-44011106)
chr8 (51-100)||(21314785-21314834)
chr8 (203-244)||(24110696-24110737)
chr8 (141-238)||(30806475-30806573)
chr8 (50-82)||(34497295-34497327)
[»] chr6 (55 HSPs)
chr6 (40-259)||(27737566-27737786)
chr6 (38-245)||(5624656-5624864)
chr6 (20-260)||(23844322-23844563)
chr6 (40-180)||(14636948-14637090)
chr6 (40-245)||(23231862-23232066)
chr6 (50-259)||(9516787-9516997)
chr6 (53-238)||(17826986-17827168)
chr6 (40-268)||(27124372-27124598)
chr6 (69-245)||(22410234-22410410)
chr6 (163-259)||(9726024-9726120)
chr6 (139-239)||(22413026-22413126)
chr6 (40-227)||(11135941-11136119)
chr6 (19-170)||(24475147-24475298)
chr6 (40-239)||(24657346-24657532)
chr6 (26-144)||(20005781-20005900)
chr6 (182-261)||(17729152-17729231)
chr6 (164-245)||(25927305-25927386)
chr6 (161-245)||(21672434-21672518)
chr6 (139-239)||(23009372-23009471)
chr6 (139-239)||(23778893-23778992)
chr6 (162-248)||(28933660-28933746)
chr6 (162-259)||(11176952-11177049)
chr6 (19-108)||(20144978-20145067)
chr6 (19-108)||(22187772-22187861)
chr6 (143-244)||(23143739-23143838)
chr6 (161-245)||(21679850-21679934)
chr6 (25-113)||(25781927-25782014)
chr6 (161-259)||(18075386-18075485)
chr6 (55-113)||(17382218-17382275)
chr6 (137-239)||(21841663-21841765)
chr6 (162-259)||(12183331-12183428)
chr6 (41-126)||(14079336-14079421)
chr6 (160-245)||(23645765-23645850)
chr6 (187-245)||(6630717-6630773)
chr6 (182-245)||(21907448-21907511)
chr6 (182-259)||(9898978-9899056)
chr6 (163-245)||(17299832-17299914)
chr6 (54-108)||(22813612-22813665)
chr6 (38-83)||(1635140-1635185)
chr6 (141-259)||(4339737-4339851)
chr6 (40-113)||(12183208-12183279)
chr6 (182-259)||(20005899-20005976)
chr6 (210-259)||(21932100-21932149)
chr6 (182-259)||(22567842-22567919)
chr6 (40-92)||(17883719-17883771)
chr6 (141-237)||(9838380-9838472)
chr6 (182-245)||(19244601-19244664)
chr6 (207-249)||(7543005-7543047)
chr6 (41-83)||(18075289-18075331)
chr6 (203-249)||(22566203-22566249)
chr6 (53-141)||(15466493-15466577)
chr6 (50-91)||(22566049-22566090)
chr6 (203-259)||(8241279-8241335)
chr6 (41-101)||(22412940-22412999)
chr6 (160-220)||(24252227-24252287)
[»] scaffold0638 (1 HSPs)
scaffold0638 (25-243)||(684-904)
[»] chr5 (34 HSPs)
chr5 (25-173)||(20744532-20744679)
chr5 (19-259)||(17431885-17432125)
chr5 (82-259)||(19004146-19004323)
chr5 (40-241)||(34128656-34128857)
chr5 (40-245)||(39434478-39434676)
chr5 (28-239)||(20563957-20564158)
chr5 (137-249)||(23388813-23388925)
chr5 (19-243)||(24245401-24245625)
chr5 (40-245)||(20315307-20315513)
chr5 (130-259)||(19051551-19051679)
chr5 (162-259)||(34487640-34487736)
chr5 (40-259)||(15375772-15375979)
chr5 (139-239)||(20858707-20858807)
chr5 (143-245)||(25550487-25550587)
chr5 (40-126)||(16523680-16523766)
chr5 (42-92)||(20549597-20549647)
chr5 (162-259)||(18208249-18208345)
chr5 (40-101)||(24140597-24140657)
chr5 (25-113)||(26835799-26835885)
chr5 (152-244)||(17315090-17315182)
chr5 (163-243)||(24852173-24852253)
chr5 (187-261)||(17171578-17171652)
chr5 (190-260)||(19086207-19086277)
chr5 (163-261)||(24167586-24167683)
chr5 (162-259)||(24266955-24267051)
chr5 (162-259)||(24343586-24343682)
chr5 (162-259)||(25402337-25402434)
chr5 (40-113)||(28664911-28664983)
chr5 (187-259)||(15469938-15470010)
chr5 (161-245)||(24140458-24140542)
chr5 (205-259)||(22755523-22755577)
chr5 (162-215)||(17635325-17635378)
chr5 (40-108)||(20858827-20858894)
chr5 (195-259)||(23380290-23380354)
[»] chr3 (50 HSPs)
chr3 (25-243)||(17438293-17438512)
chr3 (40-259)||(21301920-21302141)
chr3 (45-240)||(19925504-19925701)
chr3 (19-243)||(12411169-12411390)
chr3 (27-259)||(19908309-19908542)
chr3 (41-245)||(932758-932963)
chr3 (40-245)||(16245607-16245812)
chr3 (40-244)||(4650248-4650447)
chr3 (40-239)||(16229831-16230019)
chr3 (26-241)||(8770039-8770243)
chr3 (162-259)||(21325342-21325439)
chr3 (40-108)||(12754800-12754868)
chr3 (40-239)||(8169907-8170093)
chr3 (40-241)||(8765137-8765327)
chr3 (137-259)||(19171810-19171931)
chr3 (137-259)||(22349411-22349532)
chr3 (32-101)||(27413766-27413835)
chr3 (52-257)||(20429714-20429920)
chr3 (140-239)||(8889130-8889229)
chr3 (162-244)||(12805890-12805972)
chr3 (50-245)||(21303242-21303437)
chr3 (163-244)||(8557130-8557211)
chr3 (187-259)||(10917920-10917992)
chr3 (163-245)||(821515-821597)
chr3 (194-259)||(18458456-18458521)
chr3 (203-259)||(12759389-12759445)
chr3 (40-92)||(19909850-19909902)
chr3 (162-245)||(8319055-8319138)
chr3 (189-244)||(28728961-28729016)
chr3 (177-243)||(2167632-2167698)
chr3 (19-93)||(7494971-7495045)
chr3 (163-261)||(21825870-21825967)
chr3 (162-259)||(3116419-3116515)
chr3 (40-259)||(41508369-41508588)
chr3 (40-127)||(8883000-8883087)
chr3 (40-95)||(19171744-19171799)
chr3 (40-82)||(12805768-12805810)
chr3 (50-92)||(19576108-19576150)
chr3 (163-244)||(31286017-31286096)
chr3 (197-245)||(6289919-6289967)
chr3 (207-259)||(18736717-18736768)
chr3 (139-222)||(19909937-19910020)
chr3 (19-93)||(7478211-7478285)
chr3 (187-245)||(10744918-10744976)
chr3 (191-245)||(27542944-27542997)
chr3 (50-83)||(18736560-18736593)
chr3 (40-113)||(20023430-20023502)
chr3 (44-117)||(21325487-21325558)
chr3 (61-113)||(10745051-10745101)
chr3 (203-239)||(11518002-11518038)
[»] scaffold0035 (1 HSPs)
scaffold0035 (45-244)||(69930-70129)
[»] scaffold0155 (1 HSPs)
scaffold0155 (40-244)||(35871-36077)
[»] scaffold0016 (2 HSPs)
scaffold0016 (137-249)||(3543-3655)
scaffold0016 (195-259)||(12111-12175)
[»] scaffold0056 (2 HSPs)
scaffold0056 (40-191)||(25056-25196)
scaffold0056 (40-238)||(21299-21486)
[»] scaffold0671 (1 HSPs)
scaffold0671 (40-221)||(482-652)
[»] scaffold0054 (2 HSPs)
scaffold0054 (19-113)||(72159-72253)
scaffold0054 (208-261)||(72072-72125)
[»] scaffold0263 (1 HSPs)
scaffold0263 (40-109)||(15800-15868)
[»] scaffold0650 (1 HSPs)
scaffold0650 (163-245)||(6303-6385)
[»] scaffold0024 (2 HSPs)
scaffold0024 (190-259)||(39586-39655)
scaffold0024 (54-113)||(39735-39792)
[»] scaffold0019 (2 HSPs)
scaffold0019 (162-243)||(181706-181786)
scaffold0019 (163-259)||(11242-11338)
[»] scaffold0034 (1 HSPs)
scaffold0034 (40-239)||(76439-76626)
[»] scaffold0008 (3 HSPs)
scaffold0008 (137-240)||(234362-234465)
scaffold0008 (130-245)||(48162-48273)
scaffold0008 (162-259)||(54862-54960)
[»] scaffold1869 (1 HSPs)
scaffold1869 (40-245)||(266-472)
[»] scaffold0136 (1 HSPs)
scaffold0136 (195-244)||(15498-15547)
[»] scaffold0005 (1 HSPs)
scaffold0005 (162-259)||(168299-168395)
[»] scaffold0001 (1 HSPs)
scaffold0001 (41-138)||(69204-69301)
[»] scaffold0111 (1 HSPs)
scaffold0111 (40-95)||(3801-3856)
[»] scaffold0672 (1 HSPs)
scaffold0672 (203-261)||(1734-1792)
[»] scaffold0653 (1 HSPs)
scaffold0653 (163-245)||(4484-4566)
[»] scaffold0622 (1 HSPs)
scaffold0622 (182-259)||(730-807)
[»] scaffold0102 (1 HSPs)
scaffold0102 (40-245)||(35553-35759)
[»] scaffold0427 (1 HSPs)
scaffold0427 (162-226)||(2818-2882)
[»] scaffold0386 (2 HSPs)
scaffold0386 (40-92)||(6592-6644)
scaffold0386 (40-126)||(5982-6068)
[»] scaffold0838 (1 HSPs)
scaffold0838 (196-259)||(2372-2435)
[»] scaffold0832 (1 HSPs)
scaffold0832 (196-259)||(2403-2466)
[»] scaffold0957 (2 HSPs)
scaffold0957 (54-92)||(3314-3352)
scaffold0957 (203-259)||(3155-3210)
[»] scaffold0042 (1 HSPs)
scaffold0042 (161-259)||(29909-30006)
[»] scaffold0043 (1 HSPs)
scaffold0043 (51-83)||(89742-89774)
[»] scaffold0002 (1 HSPs)
scaffold0002 (51-91)||(114659-114699)


Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 19 - 358
Target Start/End: Original strand, 39273032 - 39273371
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  39273032 tccaacaatataaacagaggagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaaatagattaaat 39273131  T
Q  119 atgcaactttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattc 218  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || || |||||||| ||    
T  39273132 ttgcaactttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttggacgaaacgacaatccatatgaatacgatactc 39273231  T
Q  219 tacttattactttattacttggtaaacaattcagtacacttactatattctcgaccatcaatgactcagctgatacctccattttttaactttagagtca 318  Q
    ||||||| |||||||||||| |||||||||| || |||| || |||||||||||||||||||||||  |||||||||||||||| |||||||||||||||    
T  39273232 tacttatcactttattacttagtaaacaatttaggacacctaatatattctcgaccatcaatgactatgctgatacctccatttcttaactttagagtca 39273331  T
Q  319 acttcgtttgtctaccactctataagctatatgtcattct 358  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  39273332 acttcgtttgtctaccactctgtaagttatatgtcattct 39273371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 38 - 242
Target Start/End: Original strand, 1848103 - 1848307
Alignment:
Q  38 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataaccct 136  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||| | |||| |||| |||  ||||| || | |||||||    
T  1848103 gagattcgaagaatcataaccgctgcttacttttctgcaaccaaaa-caggtaaacttgctctgtttcaaacagataaaaattgcaagctctctaaccct 1848201  T
Q  137 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    ||| ||||||||||||||||||||||||||||||||| |||||| |||| ||||||  ||||||   |||||||||||| | ||||||| ||||||||||    
T  1848202 taatttttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggacgaaaggacaatcccagtggatacgatactgtacttatcactttattac 1848301  T
Q  237 ttggta 242  Q
    ||||||    
T  1848302 ttggta 1848307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 2564060 - 2563820
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    |||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||| |||||| |||| |||     
T  2564060 tccaataatataaacagggg-gattcgaaggatcctaaccgctacttacttttctgcaaactaaagcaggtaaacttgctctgttgcaaacagataaaaa 2563962  T
Q  119 atgcaactttataacccttaactt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgata 215  Q
     | ||||| | ||||||||| |||   |||||||||  |||||||| |||||||||||||||||| |||| ||||||| ||||||  |||||||||||||    
T  2563961 tttcaactctctaacccttatcttttattatatcgt-gaacttacagaaataagtaacacaaattgtttggacgaaacgacaatccttgtggatacgata 2563863  T
Q  216 ttctacttattactttattacttggtaaacaattcagtacactt 259  Q
     ||||||||  ||||||||||||||||||| |||  ||||||||    
T  2563862 ctctactta-cactttattacttggtaaacgatttggtacactt 2563820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 50 - 249
Target Start/End: Original strand, 3329544 - 3329745
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttat-at 148  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| |||  ||||||| | ||||||||| |||| || ||    
T  3329544 atcctaaccgctgcttacttttctgcaaccaaaaacaagtaaacttgctatgttgcaaacagataaaaattgcaactctctaacccttatctttcattat 3329643  T
Q  149 -cgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaa 247  Q
     ||| ||||||||||||||||||||| || ||| |||| | ||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||| ||    
T  3329644 acgttaaacttacaaaaataagtaacgcagattgtttggatgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaataa 3329743  T
Q  248 tt 249  Q
    ||    
T  3329744 tt 3329745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 8978862 - 8979088
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||| | ||||  ||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||  |||||| |||| |||     
T  8978862 tccaacaatataaacagaggggatttaaagaatcctaactgctgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaa 8978961  T
Q  119 atgcaactttataaccctt--aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatat 216  Q
     ||||| |   ||||||||  | ||||||||| ||||||||||| |||||||||||  | |||| |||| |||||||||||||| ||||||||| ||||     
T  8978962 ttgcaaatcc-taacccttttatcttttatattgtcaaacttaccaaaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatatgatac 8979060  T
Q  217 tctacttattactttattacttggtaaa 244  Q
    ||||||||| ||||||||||||||||||    
T  8979061 tctacttatcactttattacttggtaaa 8979088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 26 - 259
Target Start/End: Original strand, 8053926 - 8054155
Alignment:
Q  26 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac 125  Q
    ||||||||||| | ||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||||| |  ||||||||||| |||| | |||     
T  8053926 atataaacagaggggattcaaagaatcctaactgctgcttacttttctgcaacc-aaaacaggtaaacttgctatattgcaaatagataaaatttacaag 8054024  T
Q  126 t-ttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 224  Q
    | || |||| |||| ||||||||||||| |||||||||||||||||||    |||| ||||   ||||| |||||  |||||||||||||| |||| |||    
T  8054025 tcttttaactcttatcttttatatcgtc-aacttacaaaaataagtaatgagaattgtttg---gaaacgacaattcatgtggatacgatactctaatta 8054120  T
Q  225 ttactttattacttggtaaacaattcagtacactt 259  Q
    | ||||||||||||||||||| |||  ||||||||    
T  8054121 tcactttattacttggtaaacgatttggtacactt 8054155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 16365948 - 16365707
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||| ||  ||||||||||| |||||||||||||||||||||| |||||||||||||| |||| ||||||| | ||||||||||| |||     
T  16365948 tccaacaatataaataggggagattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacatgtaa-cttgctcagatgcaaatagatcaaaa 16365850  T
Q  119 atgcaactttataacccttaactttt-----atatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacga 213  Q
     || || | | ||| |||||||| ||     |||||||||| ||||  |||||||||||| | |||| |||| || |||| |||||| ||||||||||||    
T  16365849 ttgaaaatctctaaaccttaactcttttattatatcgtcaa-ctta--aaaataagtaacgcgaattgtttgcacaaaacgacaatccatgtggatacga 16365753  T
Q  214 tattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    || ||||||| ||||||||||||||||||||| |||  ||||||||    
T  16365752 tactctactttttactttattacttggtaaacgatttggtacactt 16365707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 245
Target Start/End: Complemental strand, 20582491 - 20582275
Alignment:
Q  26 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa- 124  Q
    ||||| ||| ||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||  |||||     
T  20582491 atatatacaaatgggattcgaagaatcctaactgctgcttacttttctgcaacc-aaaacaggtaaacttgctctgttgcaaatagataaaaattgcaaa 20582393  T
Q  125 -ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactt 223  Q
     |||| ||||||||| ||||||||||||| |||||| |||| ||||||||   |||| | || | ||||| || |||  |||||||||||||    ||||    
T  20582392 tctttttaacccttaccttttatatcgtc-aacttataaaattaagtaacgagaattgtatggaagaaacgacgatccctgtggatacgata---cactt 20582297  T
Q  224 attactttattacttggtaaac 245  Q
    || ||||||||| |||||||||    
T  20582296 atcactttattaattggtaaac 20582275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 125 - 266
Target Start/End: Original strand, 13759823 - 13759964
Alignment:
Q  125 ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 224  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| | || | |||| ||||||| ||||||  |||||||| |||| ||||||||    
T  13759823 ctttctaaaccttaacttttatatcgtcaaacttacaaaaataagtaacgcgaactgtttggacgaaacgacaatccttgtggatatgatactctactta 13759922  T
Q  225 ttactttattacttggtaaacaattcagtacacttactatat 266  Q
    | ||||||||| ||||||||| |||  |||||||||| ||||    
T  13759923 tcactttattaattggtaaacgatttggtacacttaccatat 13759964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 40 - 239
Target Start/End: Original strand, 16058910 - 16059099
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||| ||||| |||||||| |||||| |||| |||  || ||||            |    
T  16058910 gattcgaagaatcctaacagctgcttactttactgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattgaaactc-----------a 16058998  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-ttactttattactt 238  Q
    |||||||| |||||||||||||||||||||||||  ||||| |||| ||||||  |||||| |||||||||||||| |||||||| | ||||||||||||    
T  16058999 cttttataccgtcaaacttacaaaaataagtaactaaaattgtttggacgaaaggacaatccatgtggatacgatactctacttactaactttattactt 16059098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 38 - 261
Target Start/End: Complemental strand, 3734819 - 3734596
Alignment:
Q  38 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccctt 137  Q
    ||||||| |||  ||||||||  ||||||||||||||||||||||| ||||||| ||||||||| |||||| |||| |||| |||||  || ||||||||    
T  3734819 gagattcaaagagtcctaaccattgcttacttttctgcaaccaaaa-caggtaa-cttgctctgttgcaaacagataaaatttgcaatctt-taaccctt 3734723  T
Q  138 aact-------tttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactt 230  Q
    ||||       ||||||||||||| ||||   |||||||||||   |||| |||| || ||||||||||  |||||||||||||| ||||||||| ||||    
T  3734722 aactcttttattttatatcgtcaa-ctta---aaataagtaacgtgaattgtttggaccaaacaacaattcatgtggatacgatactctacttatcactt 3734627  T
Q  231 tattacttggtaaacaattcagtacacttac 261  Q
    |||||||||||||| ||||  ||||||||||    
T  3734626 tattacttggtaaaaaatttggtacacttac 3734596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 11803304 - 11803103
Alignment:
Q  26 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac 125  Q
    ||||| ||||| | ||||||||  ||||||||||||| |||||| ||||||||||||| ||||||||||||||||| |||||| | | |||| ||         
T  11803304 atatatacagaggggattcgaataatcctaaccgctggttacttctctgcaaccaaaa-caggtaaacttgctctgttgcaaaca-actaaaaat----- 11803212  T
Q  126 tttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttat 225  Q
      |  ||||  |||||||||||  |||||||||||||||||||||||| | |||| |||| ||||||  ||||||  ||||||||||||| |||||||||    
T  11803211 --ttcaacc--taacttttatactgtcaaacttacaaaaataagtaacgcgaattgtttggacgaaaggacaatccctgtggatacgatactctacttat 11803116  T
Q  226 tactttattactt 238  Q
     ||||||||||||    
T  11803115 cactttattactt 11803103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 50 - 259
Target Start/End: Original strand, 18368866 - 18369077
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgca--actttataacccttaa-cttttat 146  Q
    |||||||||| | ||||||||||| ||||||||| ||||||| |||||| || |||||| |||| |||  ||||  ||||| |||||||| | |||||||    
T  18368866 atcctaaccgtttcttacttttctacaaccaaaagcaggtaa-cttgctttgttgcaaacagataaaaattgcacgactttctaaccctttatcttttat 18368964  T
Q  147 atc-gtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||  ||||| |||| |||||||||||||   |||| |||| ||||||| ||||||  | ||||||| ||| ||||||||| |||||||||||||||||||    
T  18368965 atttgtcaa-cttataaaaataagtaactagaattgtttggacgaaacgacaatccctatggatacaatactctacttatcactttattacttggtaaac 18369063  T
Q  246 aattcagtacactt 259  Q
     ||| |||||||||    
T  18369064 tatttagtacactt 18369077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 63 - 237
Target Start/End: Original strand, 7492163 - 7492338
Alignment:
Q  63 cttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaactttt-----atatcgtcaaact 157  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| || | |||  ||||| | | |||||||||||| ||     ||||| ||||| |    
T  7492163 cttacttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaacagttaaaaattgcaaatctctaacccttaactcttttattatatcatcaaaat 7492261  T
Q  158 tacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 237  Q
       ||||||||||||  |||||| |||||||||||||||||||  ||||||||||||| ||||||||| | |||||||||    
T  7492262 ---aaaaataagtaatgcaaattgtttgaacgaaacaacaatccttgtggatacgatactctacttatcattttattact 7492338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 4786083 - 4785990
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||| |||||||| ||  | ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||    
T  4786083 tccaacaatataaataggagggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggt-aacttgctctattgcaaatagat 4785990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 130 - 259
Target Start/End: Original strand, 8054458 - 8054586
Alignment:
Q  130 taacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattact 229  Q
    |||| |||| ||||||||||||||| |||||||||||||||||||  |||| |||| ||||||| |||||   |||| |||||||| ||||||||| |||    
T  8054458 taactcttatcttttatatcgtcaa-cttacaaaaataagtaacaagaattgtttggacgaaacgacaattcctgtgaatacgatactctacttatcact 8054556  T
Q  230 ttattacttggtaaacaattcagtacactt 259  Q
    |||||| ||||||||| |||  ||||||||    
T  8054557 ttattatttggtaaacgatttggtacactt 8054586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 245
Target Start/End: Complemental strand, 6042672 - 6042477
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||| | || |||  |||||| |  || |  |||     
T  6042672 gattcaaagaatcctaaccgctgcttatttttctgcaaccaaaaaaaggtaaactt-ctctgttgcaaacatataaaaattgcaacatc-tatctttta- 6042576  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
       ||||| |||||||||   ||||||||||||| |||||| |||||||||||| |||| || ||||||||||||| ||||||||  | |||||||| ||    
T  6042575 ---ttataccgtcaaact---aaaaataagtaacgcaaattgtttgaacgaaacgacaacctctgtggatacgatactctactta-cattttattacatg 6042483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 241
Target Start/End: Complemental strand, 8877643 - 8877441
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttact-tttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccct 136  Q
    ||||| ||| ||||||||||||||||||| ||| |||||||||||  |||||||||||||||| |||||| |||| |||  |||||   ||| |||||||    
T  8877643 gattcaaagaatcctaaccgctgcttactatttttgcaaccaaaat-aggtaaacttgctctgttgcaaacagataaaaattgcaagtttttttaaccct 8877545  T
Q  137 taacttttatatcgtcaaacttacaaaaataagtaacaca-aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatta 235  Q
    |||||||||||  ||| |||||| |||||||||| ||| | |||| |||  || |||   ||||| |||||||||||||| ||||||||| || ||||||    
T  8877544 taacttttatactgtc-aacttataaaaataagt-acagagaattgtttcgacaaaagggcaatccatgtggatacgatactctacttatcaccttatta 8877447  T
Q  236 cttggt 241  Q
    ||||||    
T  8877446 cttggt 8877441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 9864327 - 9864423
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||| |||||| |||  ||||||| ||||||  |||||||| |||| ||||||||| |||||||||||||||||||||||  ||||||||    
T  9864327 aaataagtaacgcaaattgtttagacgaaacgacaatccttgtggatatgatactctacttatcactttattacttggtaaacaatttggtacactt 9864423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 31493029 - 31492946
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||| ||||||| |||| || |||| |||||| |||||||||||||| ||||||||| |||||||||| ||||||||    
T  31493029 aaaataagtaaaacaaattgtttggacaaaacgacaatccatgtggatacgatactctacttatcactttattacctggtaaac 31492946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 5530119 - 5530033
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 249  Q
    |||||||||||||||||| |||| ||||||| | ||||| ||||||||||||  | ||||||| | |||||||||||||||||||||    
T  5530119 aaataagtaacacaaattgtttggacgaaacgaaaatctctgtggatacgatgctttacttatcattttattacttggtaaacaatt 5530033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 23099967 - 23100049
Alignment:
Q  177 aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||| |||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||  ||||||||    
T  23099967 aattgtttggacgaaacgacaatctatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacactt 23100049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 5108787 - 5108714
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| || |||||||||||||  |||||| ||||    
T  5108787 gattcaaagaatcctaaccgctgcttacttttctgcaaccaaaatcaagtaaacttgctctcttgcaaacagat 5108714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 9916664 - 9916583
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    |||||||||||||| ||| ||||   ||||| |||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  9916664 aaataagtaacacatattgtttggttgaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaa 9916583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 9924576 - 9924495
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    |||||||||||||| ||| ||||   ||||| |||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  9924576 aaataagtaacacatattgtttggttgaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaa 9924495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 249
Target Start/End: Complemental strand, 17077325 - 17077140
Alignment:
Q  52 cctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgt 151  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| ||||  |||||| |||| |||  ||||||        ||  |||||||||| |||    
T  17077325 cctaaccgctgcttacttttctgcaaacaaaa-caggtaaacttactctattgcaaacagataaaaattgcaac--------cc--aacttttataccgt 17077237  T
Q  152 caaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 249  Q
    ||| |||||||||||||||||||  |||| |||| ||||||| ||||||    ||||||| ||| ||||| ||| ||||||||| ||| |||||||||    
T  17077236 caa-cttacaaaaataagtaacatgaattgtttggacgaaacgacaatccccatggatacaatactctacctatcactttattatttgataaacaatt 17077140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 9574481 - 9574409
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||||| ||| ||||||||| ||||||||| |||||||| |||||||||| ||| |||||||||    
T  9574481 acgaaacaacaatctctgtagatacgatactctacttatcactttattccttggtaaacgatttagtacactt 9574409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 241
Target Start/End: Complemental strand, 13418743 - 13418553
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||| ||| ||||||||||||||||||||| |||||| | ||||||||||||||||||||| |||||| |||| |||  |||||          | |||    
T  13418743 gattcaaagaatcctaaccgctgcttactttgctgcaatc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa----------cctaa 13418655  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaac-acaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattac-tttattact 237  Q
    |||||||| |||| |||||| ||||||||||||| ||||| | |||| ||||||  ||||||  | ||||||||||| ||||||||| || |||||||||    
T  13418654 cttttataccgtc-aacttaaaaaaataagtaacgacaaa-tgtttggacgaaaggacaatccctatggatacgatactctacttatcacttttattact 13418557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 7318347 - 7318289
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  7318347 acgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaac 7318289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 7397362 - 7397316
Alignment:
Q  41 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacag 87  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  7397362 attcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacag 7397316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 13277627 - 13277525
Alignment:
Q  137 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    ||||||||||| ||| |||||||||||||||| |||||  |||| || | ||||||  |||||| |||||||||||||| |||| |||| ||| ||||||    
T  13277627 taacttttataccgttaaacttacaaaaataattaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctatttatcactgtattac 13277528  T
Q  237 ttg 239  Q
    |||    
T  13277527 ttg 13277525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 17153179 - 17153237
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  17153179 acgaaacgacaatctatgtggatacgatactctacttatcactttcttacttggtaaac 17153237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 259
Target Start/End: Original strand, 9731516 - 9731724
Alignment:
Q  52 cctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa--ctttta---t 146  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||| || | || |||||| |||  ||||| | | |||  | |||  ||||||   |    
T  9731516 cctaaccgctgcttacttttatgcaaccaaaaacaggt-aacttgctatgttacacatagataaaaattgcaaatctctaattcgtaactcttttatttt 9731614  T
Q  147 atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaaca 246  Q
    ||| |||||||   ||||||||||||| | |||| |||| ||||||| ||||||  ||||| ||||||| ||||||||| |||||| |||||  |||||     
T  9731615 atcatcaaact---aaaaataagtaacgcgaattgtttggacgaaacgacaatccttgtggttacgatactctacttatcactttactactttttaaacg 9731711  T
Q  247 attcagtacactt 259  Q
    |||  ||||||||    
T  9731712 atttggtacactt 9731724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 4449102 - 4449002
Alignment:
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||| |||| || |||  ||| ||  ||||||||| ||| | ||||||| ||||||||||||    
T  4449102 acttttataccgtcaaacttacaaaaataagtaacaagaattgtttggacaaaaggacagtccctgtggatacaatactttacttatcactttattactt 4449003  T
Q  239 g 239  Q
    |    
T  4449002 g 4449002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 11221163 - 11221261
Alignment:
Q  161 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||| |||||| |||  ||||||| ||||||  ||||||||| ||| ||||||||| | |||||||||| |||||| |||  ||||||||    
T  11221163 aaaaataagtaacgcaaattgtttacacgaaacgacaatccctgtggatacaatactctacttatcaatttattacttagtaaacgatttggtacactt 11221261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 17153045 - 17153098
Alignment:
Q  54 taaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    |||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  17153045 taaccgctgcttacttttctgcaaccaaaaacaggt-aacttgctttgttgcaaa 17153098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 5797570 - 5797529
Alignment:
Q  202 atgtggatacgatattctacttattactttattacttggtaa 243  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  5797570 atgtggatacgatactctacttattactttattacttggtaa 5797529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 8313420 - 8313477
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||| ||||||  ||||||||||||| ||||||||| ||||||||||||||||||    
T  8313420 acgaaacgacaatccctgtggatacgataatctacttatcactttattacttggtaaa 8313477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 10587024 - 10587121
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||  | || |||  ||||||| ||||||  ||| ||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  10587024 aaaataagtaacatgagttgtttagacgaaacgacaatccctgtagatacgatactctacttatcactttattacttggtaaacgatttggtacactt 10587121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 4819084 - 4819002
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgc--tgcttacttttctgcaaccaaaaacaggtaaacttgctct 100  Q
    ||||| |||||||| ||  | ||||||||| |||||||||||  |||||||||||||||||||||||| |||| ||||||||||    
T  4819084 tccaacaatataaataggagggattcgaagaatcctaaccgcgctgcttacttttctgcaaccaaaaataggt-aacttgctct 4819002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 9131132 - 9131073
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctct 100  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||||||    
T  9131132 gattcgaagaatcctaaccgcagcttacttttttgcaaccaaaaaca-gttaacttgctct 9131073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 10584487 - 10584583
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||| |||| |||  | ||||| |||||| |||||||||||||| | | ||||| ||||||||||||| ||||| |||  ||||||||    
T  10584487 aaataagtaacacgaattgtttctatgaaacgacaatccatgtggatacgatactttgcttatcactttattacttgataaacgatttggtacactt 10584583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 10937674 - 10937618
Alignment:
Q  189 gaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||| |||||| |||||||||||||| | ||||||| |||||||||||||||||||    
T  10937674 gaaacgacaatccatgtggatacgatactatacttatcactttattacttggtaaac 10937618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 13289288 - 13289348
Alignment:
Q  32 acagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 92  Q
    ||||||| ||||||||| || |||||||||  ||| |||||||||||||||||||||||||    
T  13289288 acagatgggattcgaagaattctaaccgcttattaattttctgcaaccaaaaacaggtaaa 13289348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 16297724 - 16297810
Alignment:
Q  53 ctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact 141  Q
    |||||||||||||||||||||||||||||||| |||| ||||| ||||| |||||| | || |||  ||||| ||| ||||||||||||    
T  16297724 ctaaccgctgcttacttttctgcaaccaaaaataggt-aacttactctgttgcaaacatataaaaattgcaa-tttctaacccttaact 16297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 18495471 - 18495375
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||||||| |||  ||||||| ||||||    |||||||  || | ||||||| |||||||||||| |||||||||| |||||||||    
T  18495471 aaataagtaacacaaattgtttagacgaaacgacaatccccatggatacattactttacttatcactttattacttagtaaacaatttagtacactt 18495375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 18662661 - 18662595
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    |||||||||  ||||||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||    
T  18662661 gattcgaagagtcctaaccgctgcttacatttctgcaacc-aaaacaggt-aacttgctctgttgcaaa 18662595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 15869694 - 15869611
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||||||||||| || | |||||  || |||||| ||||  || |||||||||| ||||||||| |||||||||||||||||||    
T  15869694 aaaataagtaacgcagactatttagacaaaacaaaaatccttgcggatacgatactctacttatcactttattacttggtaaac 15869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 18467549 - 18467474
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    |||||||||||| ||||| |||  ||||||| |||||| |||||||||| ||| | ||||||| ||||||||||||    
T  18467549 aaataagtaacataaattgtttagacgaaacgacaatccatgtggatacaatactttacttatcactttattactt 18467474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 1584642 - 1584561
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    |||||||||||| | | || |||  ||||||||||||||  ||||||||||||| || |||||| ||||||||||||||||||    
T  1584642 aaaataagtaacgcgatttgtttagacgaaacaacaatccctgtggatacgatactc-acttatcactttattacttggtaaa 1584561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 2350763 - 2350829
Alignment:
Q  178 attatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    |||||||| || |||| |||||| |||||||||||||| ||||||||  | ||||||||||||||||    
T  2350763 attatttggacaaaacgacaatccatgtggatacgataatctacttagcagtttattacttggtaaa 2350829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 5108649 - 5108568
Alignment:
Q  177 aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||| |||| ||||||| ||||||  ||||||||||||| ||||||||  |||||||||||||||||| ||||  ||||||||    
T  5108649 aattgtttggacgaaacgacaatccttgtggatacgatactctactta-cactttattacttggtaaataatttggtacactt 5108568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 9245279 - 9245197
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||||| |||| ||| |||||||  |||||| |||||||||||||| ||| ||||  | ||| |||||||||||||    
T  9245279 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaac 9245197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 9261302 - 9261220
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||| |||||||||| ||| |||||||  |||||| || ||||||||||| ||| ||||| | ||| |||||||||||||    
T  9261302 aaataagcaacacaaattgtttaaacgaaatgacaatccatatggatacgatactctgcttatcatttttttacttggtaaac 9261220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 18449340 - 18449254
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 249  Q
    ||||||||||| | |||| ||||   ||||| ||||||  | ||||||||||||| ||||| | |||||||||||||||||||||||    
T  18449340 aaataagtaacgccaattgtttggctgaaacgacaatccctatggatacgatattatacttctcactttattacttggtaaacaatt 18449254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 18662539 - 18662457
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||||||||||   |||| |||| ||||||| ||||||  ||||||||||||| ||||||||| |||||| | ||||||||||    
T  18662539 aaataagtaacgtgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttagtgcttggtaaac 18662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 1872884 - 1872808
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    |||||||||||||| |||| |||| | ||||| ||||  ||||||||||||||| ||||||||| | | ||||||||    
T  1872884 aaaataagtaacacgaattgtttgtatgaaacgacaacttatgtggatacgatactctacttatcattgtattactt 1872808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 9890237 - 9890185
Alignment:
Q  207 gatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||| |||||||| |||||||||||| ||||||| ||| |||||||||    
T  9890237 gatacgatactctacttactactttattactcggtaaacgatttagtacactt 9890185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 15869837 - 15869765
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaa 91  Q
    ||||| |||||||||||  | ||||| |||  ||||||||| || |||||||| |||||||||||||||||||    
T  15869837 tccaacaatataaacaggggggattcaaagagtcctaaccgttgtttacttttatgcaaccaaaaacaggtaa 15869765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 16297835 - 16297902
Alignment:
Q  177 aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    |||| |||| ||||||  |||||| ||||| |||||||| ||||||||| || |||||||||||||||    
T  16297835 aattgtttggacgaaatgacaatccatgtgaatacgataatctacttatcacattattacttggtaaa 16297902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 4579195 - 4579114
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||||| |||| |||| || |||  ||||||| | ||||||||||| ||||||||| || ||||||||| ||||||    
T  4579195 aaataagtaacacgaattgtttggacaaaaagacaatctctttggatacgatactctacttatcac-ttattacttagtaaac 4579114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 4449189 - 4449113
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaa 117  Q
    ||||| ||| || |||||||||| |||||||| ||||||| |||| ||||||| | ||||||||||||| |||| |||    
T  4449189 gattcaaagaattctaaccgctgtttacttttttgcaacc-aaaataggtaaattcgctctgctgcaaacagataaaa 4449113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 4986654 - 4986557
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||| | |  |||||  ||||||| |||||| |||||| ||| ||| |||||| |  ||||||||||||||||||| |||  ||||||||    
T  4986654 aaaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctactcagcactttattacttggtaaacgatttggtacactt 4986557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 4990752 - 4990655
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||| | |  |||||  ||||||| |||||| |||||| ||| ||| |||||| |  ||||||||||||||||||| |||  ||||||||    
T  4990752 aaaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctactcagcactttattacttggtaaacgatttggtacactt 4990655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 5797731 - 5797656
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaactt-gctctgctgcaaatagattaa 116  Q
    ||||| ||| ||||||||||||||| || || |||||| ||||| ||||||||||| |||||| ||||||||||||||    
T  5797731 gattcaaagaatcctaaccgctgctaacatt-ctgcaatcaaaa-caggtaaactttgctctgttgcaaatagattaa 5797656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 9131005 - 9130918
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggata--cgatattctacttattactttattacttggtaaacaatt 249  Q
    ||||||||| ||||||||||||| ||||||| | |||| |||||||||  | ||| | ||||||  ||||||||||||| |||||||||    
T  9131005 aaataagtatcacaaattatttggacgaaacgataatccatgtggatatacaatactatacttac-actttattacttgataaacaatt 9130918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 9500518 - 9500461
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||||||||||  ||||||||||||| |||| | || || |||||||||||||||    
T  9500518 acgaaacaacaatccttgtggatacgatactctaatgatcacattattacttggtaaa 9500461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 17191096 - 17191177
Alignment:
Q  45 gaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 126  Q
    |||| ||||||| | || ||| |||||||||||||||||||||||||| | |||||| || ||| |||| |||  |||||||    
T  17191096 gaagaatcctaatcactactttcttttctgcaaccaaaaacaggtaaaatcgctctgttggaaacagataaaaattgcaact 17191177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 17203124 - 17203036
Alignment:
Q  160 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 249  Q
    |||||||||||||| |  ||| |||| ||||||| ||||||   ||| |||||||| |||||||| |||||||||||||  |||||||||    
T  17203124 caaaaataagtaacgcggattgtttggacgaaacgacaatccccgtgaatacgatactctactta-tactttattacttcataaacaatt 17203036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 22067128 - 22067168
Alignment:
Q  51 tcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 92  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  22067128 tcctaaccgttgcttacttttctgcaacc-aaaacaggtaaa 22067168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 2453802 - 2453735
Alignment:
Q  191 aacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||| |||||||||| |||||||| ||||||||  | ||||||||||| ||||||||| | |||||||    
T  2453802 aacaataatctatgtgaatacgatactctacttaa-attttattacttgataaacaatttaatacactt 2453735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 4785910 - 4785854
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 243  Q
    ||||||| ||||||  |||||||  |||| ||||||||| |||||||||||||||||    
T  4785910 acgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggtaa 4785854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 4818910 - 4818854
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 243  Q
    ||||||| ||||||  |||||||  |||| ||||||||| |||||||||||||||||    
T  4818910 acgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggtaa 4818854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 26134785 - 26134844
Alignment:
Q  199 tctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||||||| ||||||||  | ||||||||||||||||| |||  ||||||||    
T  26134785 tctatgtggatacgatactctactta-cattttattacttggtaaacgatttggtacactt 26134844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 7e-62; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 13909097 - 13908847
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| ||||||||||   | ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |||     
T  13909097 tccaacaatataaacaagggggattcaaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaacttgctctgttgcaaacagataaaaa 13908998  T
Q  119 atgcaa--ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatat 216  Q
     |||||  |||| ||||| ||| |||||||||||||||| ||||||||||||||||||| |||| |||| ||||||| ||||||  |||||||||||||     
T  13908997 ttgcaagactttctaaccttta-cttttatatcgtcaaaattacaaaaataagtaacacgaattgtttggacgaaacgacaatccttgtggatacgatac 13908899  T
Q  217 tctacttattactttattacttggtaaacaattcagtacacttactatattc 268  Q
    ||||||||| ||||||||||||||||||| |||  |||||||| ||||||||    
T  13908898 tctacttatcactttattacttggtaaacgatttggtacacttgctatattc 13908847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 15165009 - 15164769
Alignment:
Q  19 tccaataatataaacagatgag-attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaa 117  Q
    ||||| |||||||||||| | | |||||||| |  |||||| |  ||||||||||||||||||||| ||||||||||||||||| |||||| | || |||    
T  15165009 tccaacaatataaacagagggggattcgaagaaaactaacctccacttacttttctgcaaccaaaa-caggtaaacttgctctgttgcaaacaaataaaa 15164911  T
Q  118 tatgcaactttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatatt 217  Q
      ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||  ||||||  ||||||||||||| |    
T  15164910 attgcaactctctaacccttaacttttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggacgaaatgacaatccctgtggatacgatact 15164811  T
Q  218 ctacttattactttattacttggtaaacaattcagtacactt 259  Q
    || ||||||| || |||||||||||||| |||  ||||||||    
T  15164810 ctgcttattaattgattacttggtaaacgatttggtacactt 15164769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 19 - 244
Target Start/End: Complemental strand, 7582540 - 7582314
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||| | ||||| ||| ||||||||| ||||||| ||||||||||||||||||||||||||||| |||  |||||| |||| |||     
T  7582540 tccaacaatataaacagaggggattcaaagaatcctaaccactgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaa 7582441  T
Q  119 atgcaactttataaccctt--aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatat 216  Q
     ||||| |   ||| ||||  | ||||||||||||||||||||| |||||||||||  || ||| |||| |||||||||||||| ||||||||| ||||     
T  7582440 ttgcaaatcc-taagccttttatcttttatatcgtcaaacttaccaaaataagtaatgcagattgtttggacgaaacaacaatccatgtggatatgatac 7582342  T
Q  217 tctacttattactttattacttggtaaa 244  Q
    ||||||||| ||||||||||||||||||    
T  7582341 tctacttatcactttattacttggtaaa 7582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 79 - 257
Target Start/End: Original strand, 16730316 - 16730494
Alignment:
Q  79 caaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaa 178  Q
    ||||||||||||||||||||||| |||||| |||| |||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |     
T  16730316 caaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaactttctaacccttaacttttatattgtcaaacttacaaaaataagtaacgcgag 16730415  T
Q  179 ttatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacac 257  Q
    || |||| ||||||| | ||||  | ||||||||||| ||||||||| ||||| || ||| |||| | ||| |||||||    
T  16730416 ttgtttggacgaaacgaaaatccttttggatacgatactctacttatcactttctttcttcgtaagcgatttagtacac 16730494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 31 - 244
Target Start/End: Original strand, 19562043 - 19562260
Alignment:
Q  31 aacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttat 130  Q
    |||||| | ||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||| |||  ||||| |  ||    
T  19562043 aacagaggggattcgaagaattctaaccgctgattacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaagagataaaaattgcaattaaat 19562142  T
Q  131 aaccc--ttaactt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttat 225  Q
    |||||  ||| |||   |||||  |||||||||| |||||||||||| ||||||| |||| | ||||| |||||   |||||| |||||| | |||||||    
T  19562143 aacccttttatcttttattataatgtcaaactta-aaaaataagtaatacaaattgtttggatgaaacgacaatacttgtggacacgatactttacttat 19562241  T
Q  226 tactttattacttggtaaa 244  Q
     ||||||||||||||||||    
T  19562242 cactttattacttggtaaa 19562260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 245
Target Start/End: Complemental strand, 17217031 - 17216833
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccc--ttaactt---tt 144  Q
    |||||||||| ||||||||||||| ||||||||| || |||||||||||||| |||||| |||| |||  ||||||||| ||||||  ||| |||   ||    
T  17217031 atcctaaccgttgcttacttttctacaaccaaaa-catgtaaacttgctctgttgcaaacagataaaaattgcaactttctaacccttttatcttgtatt 17216933  T
Q  145 atatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||| || |||||||||| |||||||||   |||| |||| ||||||| |||||| ||||||||| |||| ||||||||| |||||||| |||||||||    
T  17216932 atatcatc-aacttacaaatataagtaacgagaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcactttattgcttggtaaa 17216834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 19492568 - 19492797
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||  | ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| || |||||| | | |||||    
T  19492568 tccaacaatataaacaggggggattcgaagaatcctaaccgccgcttacttttctgcaaccaaaaacatgtaaacttgctgtgttgcaaaca-aataaat 19492666  T
Q  119 atgcaactttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattc 218  Q
    |       ||  ||||  |||||||||||| ||| ||| |||||||||||||||| | |||| |||| | ||||| |||||   ||||||||||||| ||    
T  19492667 a-------ttgcaacc--taacttttatattgtc-aacctacaaaaataagtaacgcgaattgtttggatgaaacgacaattcttgtggatacgatactc 19492756  T
Q  219 tacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||  |||||||||||||||||| |||  ||||||||    
T  19492757 tacttatccctttattacttggtaaacgatttggtacactt 19492797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 17709996 - 17709750
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||| ||| | | ||||||||| |||||||| ||| ||||||||| ||||||| ||||||||||||||||||||| |||||| | || |||     
T  17709996 tccaacaatatatacataggggattcgaagaatcctaacagctacttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacatataaaaa 17709898  T
Q  119 atgcaa--ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatat 216  Q
     | |||  |||| ||||||||| |||||||||||||||| ||| |||||||||||||   |||| |    || ||| |||||||  | ||||||| |||     
T  17709897 tttcaagtctttttaacccttatcttttatatcgtcaaa-ttataaaaataagtaacgagaattgt---gacaaaagaacaatccctatggatacaatac 17709802  T
Q  217 tctacttattactttattacttggtaaacaattcagtacacttactatattc 268  Q
    ||||||||| ||||||||||||||||||| |||  |||||||| ||||||||    
T  17709801 tctacttatcactttattacttggtaaacgatttggtacacttgctatattc 17709750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 13692558 - 13692766
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||  | ||||   || |||  |||||| | |||            
T  13692558 gattcgaagaatcctaactactgcttacttttctgcaaccaaaaacaggtaaacttgctcttttacaaactaataaaaattgcaacct-ata-------- 13692648  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
     ||||||| | |||| || ||||||||||||||||| |||| ||||  |||||| |||||| ||||||||| |||| ||||||||| |||||||||||||    
T  13692649 -ttttataccttcaacct-acaaaaataagtaacacgaattgtttggtcgaaacgacaatccatgtggatatgatactctacttatcactttattacttg 13692746  T
Q  240 gtaaacaattcagtacactt 259  Q
    |||||| |||  ||||||||    
T  13692747 gtaaacgatttggtacactt 13692766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 243
Target Start/End: Original strand, 17337012 - 17337216
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| ||| ||| | |||||||||||| ||||||||||||||||||||||||||||| || ||| |||| |||  ||||| | |  ||||||| |    
T  17337012 gattcgaagaatcataatctctgcttacttttatgcaaccaaaaacaggtaaacttgctctgttgtaaacagataaaaattgcaaatctcaaacccttta 17337111  T
Q  140 c-----ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 234  Q
    |     | |||||||||| ||||   ||||||||||||| |||||| |||| ||||||  ||||||| | ||||||||||| ||||||||| || |||||    
T  17337112 ctcttttattatatcgtc-aact---aaaaataagtaacgcaaattgtttggacgaaatgacaatctctttggatacgatactctacttatcacgttatt 17337207  T
Q  235 acttggtaa 243  Q
    ||| |||||    
T  17337208 actcggtaa 17337216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 21323873 - 21323972
Alignment:
Q  160 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||| | |||| |||| ||||||| ||||||||||||||||||||| |||||| || || |||||| ||||||||| ||| |||||||||    
T  21323873 caaaaataagtaacgcgaattgtttggacgaaacgacaatctatgtggatacgatactctactgatcacattattatttggtaaacgatttagtacactt 21323972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 224
Target Start/End: Original strand, 17026221 - 17026394
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||| || ||||| |||||| |||| |||  |||||||            |    
T  17026221 gattcgaagaatcctaaccgctgcttacttgtctgcaaccaaaaacaggtaaatttactctgttgcaaacagataaaaactgcaactc-----------a 17026309  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 224  Q
    ||||||||  ||||||||||||||||||||||||   |||| ||   ||||||  |||||| ||||| |||||||| ||||||||    
T  17026310 cttttatactgtcaaacttacaaaaataagtaactagaattgttcccacgaaaggacaatccatgtgaatacgatactctactta 17026394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 11490648 - 11490534
Alignment:
Q  141 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 240  Q
    |||||||||||||||||    |||||||||||| | |||| |||| | ||||| ||||||  ||||||||||||| ||||||||| |||||||||||||     
T  11490648 ttttatatcgtcaaact----aaaataagtaacgcgaattgtttggaagaaactacaatccctgtggatacgatactctacttatcactttattacttga 11490553  T
Q  241 taaacaattcagtacactt 259  Q
    |||||||||  ||||||||    
T  11490552 taaacaatttggtacactt 11490534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 24639318 - 24639406
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    ||||| |||||||| ||| | ||||| ||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  24639318 tccaacaatataaatagagg-gattcaaagaatcctaaccactgcttacttttctgcaaccgaaaacaggtaaacttgctctgttgcaaa 24639406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 259
Target Start/End: Original strand, 13128768 - 13128971
Alignment:
Q  58 cgctgcttacttttctgcaacc-aaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttat---atcgtca 153  Q
    |||||||||||||||||||||| ||||||||| |||||| ||||| | |||| | || |||  ||||||| | ||||||||| |||||||   || ||||    
T  13128768 cgctgcttacttttctgcaaccgaaaaacaggcaaacttactctgttccaaacaaataaaaattgcaactctctaacccttatcttttattatatggtca 13128867  T
Q  154 aacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagt 253  Q
    |   || ||||||||||||| | | || |||| ||||||| ||||||  | ||||||| ||| ||||||||| | ||||||||||||||||| |||  ||    
T  13128868 ac--taaaaaaataagtaacgcgagttgtttggacgaaacgacaatccctatggatacaatactctacttatcattttattacttggtaaacgatttggt 13128965  T
Q  254 acactt 259  Q
    ||||||    
T  13128966 acactt 13128971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 165 - 261
Target Start/End: Original strand, 13992879 - 13992975
Alignment:
Q  165 ataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 261  Q
    ||||||||||| |||| |||| || |||| | |||| |||||||||||||| ||||||||  |||||||||||||||||||||||  ||||||||||    
T  13992879 ataagtaacacgaattgtttggacaaaacgaaaatccatgtggatacgatactctacttaccactttattacttggtaaacaatttggtacacttac 13992975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 20315098 - 20315002
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||| |||||| |||| ||||||| ||||||  |||||||| |||||||||||||| | ||||||||||||||||| |||  ||||||||    
T  20315098 aaataagtaacgcaaattgtttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattacttggtaaacgatttggtacactt 20315002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 17672101 - 17672004
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||| | | || |||  |||||||||||||| |||||||||| ||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  17672101 aaaataagtaacgcgagttgtttagacgaaacaacaatccatgtggatacaatactctacttatcactttattacttggtaaacgatttggtacactt 17672004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 11700571 - 11700666
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||| |||||||||||| ||| |||||||  ||||||| ||||||||||||| |||| |||| | |||||||||||||||||||||  ||||||||    
T  11700571 aaataggtaacacaaattgtttaaacgaaaagacaatct-tgtggatacgatactctatttatcattttattacttggtaaacaatttggtacactt 11700666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 20829739 - 20829835
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||  |||||| |||||||||||||||||||  ||||||||| ||| || | |||| ||||||||||||||||||| |||  ||||||||    
T  20829739 aaaataagtaatgcaaattttttgaacgaaacaacaatccttgtggatacaatactc-agttatcactttattacttggtaaacgatttggtacactt 20829835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 12406580 - 12406632
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 92  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  12406580 gattcgaagaatcctaaccgctgtttactttcctgcaaccaaaaacaggtaaa 12406632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 19882738 - 19882642
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||| | |||| |||| ||||||| |||||| |||| ||||||||| |||||| || ||||||||||||| ||||| |||  ||||||||    
T  19882738 aaataagtaacgcgaattgtttggacgaaacgacaatccatgttgatacgatactctactaatcactttattacttgataaacgattttgtacactt 19882642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 239
Target Start/End: Complemental strand, 25098043 - 25097856
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||||||||||||| ||||||||  |||||||||||||||||| ||||| || ||| || |||| |||  ||||||           |||    
T  25098043 gattcgaagaatcctaaccgctgcatacttttcaacaaccaaaaacaggtaaatttgctttgttgccaacagataaaaattgcaac-----------taa 25097955  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-ttactttattactt 238  Q
    |||| |||| |||||   || ||||||||||||||  |||| || | || ||| ||||||| |||||||||||||| |||||||| | ||||||||||||    
T  25097954 ctttaatattgtcaa--ctataaaaataagtaacatgaatttttcggacaaaagaacaatccatgtggatacgatactctacttactaactttattactt 25097857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 12578266 - 12578348
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    |||||||| ||| |||||| |||| || |||| |||||| |||||||||||||| |||| |||| ||||||||| ||||||||    
T  12578266 aaaataagaaacgcaaattgtttggacaaaacgacaatccatgtggatacgatactctaattatcactttattatttggtaaa 12578348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 5679304 - 5679207
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||| | |||| |||| ||||||||| | |  |||| ||||||||| |||||| || ||||||||||||||||||| |||  ||||||||    
T  5679304 aaaataagtaacgcgaattgtttggacgaaacaaaagttcatgtagatacgatactctactaatcactttattacttggtaaacgatttggtacactt 5679207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 14648993 - 14648897
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||| |  |||||  | ||||| ||||||  ||||||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  14648993 aaaataagtaacacgagctatttagaagaaacgacaatcc-tgtggatacgatactctacttatcactttattacttggtaaacgatttggtacactt 14648897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 23080439 - 23080342
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactta 260  Q
    ||||||||||| |||||| ||||   ||||| |||||| ||||| |||| ||||||||||||| || |||||| ||||||||  ||| ||||||||||    
T  23080439 aaataagtaacgcaaattgtttggttgaaacgacaatccatgtgaatacaatattctacttatcaccttattatttggtaaattatttagtacactta 23080342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 24639466 - 24639535
Alignment:
Q  174 acaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 243  Q
    ||||||| |||| || |||| | |||| |||||||||||||| ||||||||| |||||||||||||||||    
T  24639466 acaaattgtttggacaaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaa 24639535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 25121104 - 25121175
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||| ||| ||||||||||| |||||| ||||    
T  25121104 gattcgaagaatcctaaccgctgcttacttttctgcaatc-aaaacgggt-aacttgctctgttgcaaacagat 25121175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 12406666 - 12406753
Alignment:
Q  139 acttttatatcgtcaaa-cttacaaaaataagtaacacaaattatttgaacg-aaacaacaatctatgtggatacgatattctactta 224  Q
    ||||||||||||||||| |||||||||||||||||||  |||| || | ||| ||| ||||||| ||||| | |||||||||||||||    
T  12406666 acttttatatcgtcaaaacttacaaaaataagtaacaagaattgttcggacgaaaagaacaatccatgtgcaaacgatattctactta 12406753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 22357533 - 22357634
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattc---tacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||| || | ||| || ||||| |||||| |||||||||||||| |    ||||||| ||||||||||||||||||  ||| |||||||||    
T  22357533 aaataagtaacacgaactgtttaaatgaaacgacaatccatgtggatacgatagtactttacttatcactttattacttggtaaatgatttagtacactt 22357632  T
Q  260 ac 261  Q
    ||    
T  22357633 ac 22357634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 19929675 - 19929757
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||||||||||    |||||  ||||||| |||||| |||||||||||||| |||| |||| ||||| ||||||||||||    
T  19929675 aaaataagtaacacgggctatttagacgaaacgacaatccatgtggatacgatactctatttatcactttgttacttggtaaa 19929757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 25121227 - 25121308
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||| | |||| |||| ||||||| ||||||  ||||||||||||| | ||||||  |||||||||||||||||||    
T  25121227 aaataagtaacgcgaattgtttggacgaaaccacaatccttgtggatacgatactatactta-cactttattacttggtaaac 25121308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 43941812 - 43941874
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 249  Q
    |||||||||||||||||||||||| ||||   ||||||| ||||||||||||| |||| ||||    
T  43941812 acgaaacaacaatctatgtggataggataccttacttatcactttattacttgataaataatt 43941874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 17275890 - 17275833
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||||||||| | | |||||||||||||||| |||| ||||||||| ||||||||    
T  17275890 acgaaacaacaatttctatggatacgatattctaattatcactttattatttggtaaa 17275833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 19092374 - 19092297
Alignment:
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||| ||||||| |||||| ||||| || ||||| ||| ||||| ||||||||||||| |||||||||  ||||||||    
T  19092374 tttggacgaaacgacaatccatgtgaatgcgatactcttcttatcactttattacttgataaacaatttggtacactt 19092297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11935293 - 11935237
Alignment:
Q  26 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaa 82  Q
    ||||||| ||| | ||||||||| ||||||||| ||| |||||||||||||||||||    
T  11935293 atataaatagaggggattcgaagaatcctaaccactgattacttttctgcaaccaaa 11935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 15047219 - 15047144
Alignment:
Q  170 taacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||||||| || |||  ||||||| | |||| |||| ||||||||  ||||||||| |||||||||||||||||||    
T  15047219 taacacaagttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaac 15047144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 15107205 - 15107280
Alignment:
Q  170 taacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||||||| || |||  ||||||| | |||| |||| ||||||||  ||||||||| |||||||||||||||||||    
T  15107205 taacacaagttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaac 15107280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 40227988 - 40227925
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| | |||||| ||||    
T  40227988 atcctaaccgctgcttatttttcggcaacaaaaaataggtaaacttactccgttgcaaacagat 40227925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 22218630 - 22218687
Alignment:
Q  191 aacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 249  Q
    ||||||||||| | ||||||||||| ||||||||  ||||||||||||| |||||||||    
T  22218630 aacaacaatctttatggatacgatactctactta-cactttattacttgataaacaatt 22218687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 22526462 - 22526380
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||||||||||||| ||  ||||   ||||| |||||  |||||||||||||| ||||||||| ||||||||| ||| |||||    
T  22526462 aaataagtaacacagatggtttggttgaaacgacaattcatgtggatacgatactctacttatcactttattatttgataaac 22526380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 8969722 - 8969818
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||| |||| |||| ||||||| |||||||  || |||||| |  ||||||||  |||||||||||| ||||| ||||  ||||||||    
T  8969722 aaaataagtaacacgaattgtttggacgaaacgacaatctcagtagatacgttgctctactta-cactttattactttgtaaataatttggtacactt 8969818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 19900645 - 19900582
Alignment:
Q  195 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||| |||| ||| |||| ||||||||  |||||||||||||||||||||||  ||||||||    
T  19900645 acaatctttgtgaatatgatactctacttac-actttattacttggtaaacaatttggtacactt 19900582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 22175995 - 22176059
Alignment:
Q  195 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||| | ||||||| ||| ||||||||| ||||||||||||| ||||| |||  ||||||||    
T  22175995 acaatctctatggatacaatactctacttatcactttattacttgataaacgatttggtacactt 22176059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 50 - 259
Target Start/End: Original strand, 17610143 - 17610353
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataacccttaacttttatat 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | || |||  | ||| |||| ||||| |||||||||||||    
T  17610143 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaacatataaaaattacaagctttctaacctttaacttttatat 17610242  T
Q  149 cgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaat 248  Q
    |||||||||||||||||||||||||   |||| |||| ||||||| |||||| |||||||||||||| ||||||||| ||||||||||||||||||| ||    
T  17610243 cgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacgatactctacttataactttattacttggtaaacgat 17610342  T
Q  249 tcagtacactt 259  Q
    |  ||||||||    
T  17610343 ttggtacactt 17610353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 259
Target Start/End: Complemental strand, 12208840 - 12208603
Alignment:
Q  23 ataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgc 122  Q
    |||||||||| ||  | ||||||||| ||||||||||||||||||||||||||| | |||| ||||||||||||||||| |||||| ||||||||  ||     
T  12208840 ataatataaataggggggattcgaagaatcctaaccgctgcttacttttctgcagctaaaa-caggtaaacttgctctgttgcaaacagattaaaactga 12208742  T
Q  123 aac-tttataaccctt--aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattct 219  Q
    ||| ||| ||||||||  | ||||||||||||||| |||||||||||||||||| | |||| |||| ||||||| |||||| ||||||||| ||||||||    
T  12208741 aacctttctaacccttttatcttttatatcgtcaa-cttacaaaaataagtaacgcgaattgtttggacgaaacgacaatccatgtggatatgatattct 12208643  T
Q  220 acttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||| ||||||||||||||||||| ||| |||||||||    
T  12208642 acttatcactttattacttggtaaacgatttagtacactt 12208603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 15543844 - 15544063
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact-ttataaccctta 138  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||| || || |||||| | || |||  ||||||| || |||||||||    
T  15543844 gattcgaagaatcctaaccgttgcttacttttctgcaacaaaaaacaggtaaacttactatgttgcaaacaaataaaaattgcaactcttttaaccctta 15543943  T
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
     |||||||||||||||| ||| ||||||||||||||| |||| |||| ||||||| ||||| |  |||||||||||| ||||||||| ||||||||||||    
T  15543944 tcttttatatcgtcaaa-ttaaaaaaataagtaacacgaattgtttggacgaaacgacaatttccgtggatacgatactctacttatcactttattactt 15544042  T
Q  239 ggtaaacaattcagtacactt 259  Q
    ||||||| |||  ||||||||    
T  15544043 ggtaaacgatttggtacactt 15544063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 21449320 - 21449091
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||  | ||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||| || |||||| |||| |||     
T  21449320 tccaacaatataaacaggagggattcgaagaatcctaaccgctgcttacttttctgcatccaaaaacagttaaacttgctatgttgcaaacagataaaaa 21449221  T
Q  119 atgcaactttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattc 218  Q
     ||         ||||  || |||||||| |||||||||||||||||||||||||| ||||| ||||  |||||| ||||||  ||||||||||||| ||    
T  21449220 ttg---------aacc--tatcttttataccgtcaaacttacaaaaataagtaacataaattgtttggccgaaacgacaatccttgtggatacgatactc 21449132  T
Q  219 tacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||| ||||||||||||||||||| |||  ||||||||    
T  21449131 tacttatcactttattacttggtaaacgatttggtacactt 21449091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 50 - 245
Target Start/End: Original strand, 25405518 - 25405713
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataacccttaa-cttttata 147  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| | || |||  ||||| |||| |||||||||| ||||||||    
T  25405518 atcctaaccgctgcttacttt-ctgcaaccaaaaacaagtaaacttgctctgttgcaaacaaataaaaattgcaagctttctaacccttaaacttttata 25405616  T
Q  148 tcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||| ||||||||||||||||||   || | |||| ||||||| ||||||  ||||||||||||| | ||||||| |||||||||||||||||||    
T  25405617 tcgtcaa-cttacaaaaataagtaacgtgaactgtttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaac 25405713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 17359404 - 17359164
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||| ||| | ||||||||| |||||||||||  ||||||||| |||||||||||||||||||| ||||| || ||| |  |||| |||     
T  17359404 tccaacaatataaatagaggggattcgaagaatcctaaccgcatcttacttttatgcaaccaaaaacaggtaaatttgctatgttgccagcagataaaaa 17359305  T
Q  119 atgcaactttataacccttaactt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgata 215  Q
     ||||||| | ||||||||| |||   |||||||||||| ||   |||||||||||||   ||||||||| ||||||| ||||||| | |||||| ||||    
T  17359304 ttgcaactctctaacccttatcttttattatatcgtcaacct---aaaaataagtaacgagaattatttggacgaaacgacaatctttatggatatgata 17359208  T
Q  216 ttctacttattactttattacttggtaaacaattcagtacactt 259  Q
     || |||||| ||||||||||||||||||| |||  ||||||||    
T  17359207 ctcaacttatcactttattacttggtaaacgatttggtacactt 17359164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 16179218 - 16179010
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataacccttaacttttatat 148  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||  |||| |||  |||||    | |||||||||  ||||||||    
T  16179218 atcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaatcagataaaaattgcaagacatctaacccttatattttatat 16179119  T
Q  149 cgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaat 248  Q
    |||| |||||||||||||||||||||  |||| |||| ||||||| ||  ||  | ||||||||||| ||||||||| | ||||||||||| ||||| ||    
T  16179118 cgtc-aacttacaaaaataagtaacaagaattgtttggacgaaacgactttccttttggatacgatactctacttatcagtttattacttgttaaacgat 16179020  T
Q  249 tcagtacact 258  Q
    |  |||||||    
T  16179019 ttggtacact 16179010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 18736129 - 18736337
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||  |||||| |||| |||| |||||| |          ||    
T  18736129 gattcgaagaatccttaccgctgcctacttttctgcaaccaaaaataggtaaacttgctctattgcaaacagataaaatttgcaacct----------aa 18736218  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
     ||||||| |||||| || |||||||||||||||  ||||| |||||||||||| ||||||  |||||||||||||  |||||||| |||||||||||||    
T  18736219 attttataccgtcaacct-acaaaaataagtaacggaaattgtttgaacgaaacgacaatccctgtggatacgatacactacttatcactttattacttg 18736317  T
Q  240 gtaaacaattcagtacactt 259  Q
     ||||| |||  ||||||||    
T  18736318 ttaaacgatttggtacactt 18736337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 25 - 258
Target Start/End: Complemental strand, 9401742 - 9401511
Alignment:
Q  25 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 124  Q
    |||||||| ||| | ||||||||| |||||||||||| ||||||||| || |||| ||||||||||||||| ||||| |||||| |||| |||  |||||    
T  9401742 aatataaatagaggggattcgaagaatcctaaccgctacttacttttttgtaacc-aaaacaggtaaacttactctgttgcaaacagataaaaattgcaa 9401644  T
Q  125 ctttataacccttaacttttatatcgtca--aacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctact 222  Q
    || | ||||| ||| |||||||    |||  |||||||||||||||||||| | |||| |||| ||||||| |||||  |||||||||||||| |||||     
T  9401643 ctctctaaccgttatcttttattatatcaacaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaattcatgtggatacgatactctac- 9401545  T
Q  223 tattactttattacttggtaaacaattcagtacact 258  Q
      |||||||||||| |||||||| |||  |||||||    
T  9401544 --ttactttattacctggtaaactatttggtacact 9401511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 38 - 259
Target Start/End: Complemental strand, 29242730 - 29242521
Alignment:
Q  38 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccctt 137  Q
    ||||||| ||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||||| |||||| |||| |||  |||||| |              
T  29242730 gagattcaaagtatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacct---------- 29242642  T
Q  138 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 237  Q
    ||||||||||||||||| |||||||||||| ||||| | |||| |||| | ||||| ||||||  | ||||||||||| ||||||||| |||||||||||    
T  29242641 aacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggatgaaacgacaatcactatggatacgatactctacttatcactttattact 29242543  T
Q  238 tggtaaacaattcagtacactt 259  Q
    || |||||||||  ||||||||    
T  29242542 tgataaacaatttggtacactt 29242521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 31235905 - 31236145
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||| ||| |  |||| ||| ||| |||||| ||||||||||| |||||||||||||| |||||||||||||| |||||| |||| |||     
T  31235905 tccaacaatataaatagagggaattcaaagaatcttaaccgttgcttacttttatgcaaccaaaaacaagtaaacttgctctgttgcaaagagataaaaa 31236004  T
Q  119 atgcaactttataacccttaactt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgata 215  Q
     ||||||| | |||||||||  ||   |||||||||| |||||  ||||||||||||| | ||||||||| || |||| ||||||| ||| ||||  |||    
T  31236005 ttgcaactctctaacccttatattttattatatcgtc-aactt--aaaaataagtaacgcgaattatttggacaaaacgacaatctttgtagatataata 31236101  T
Q  216 ttctacttattactttattacttggtaaacaattcagtacactt 259  Q
     ||| ||||| |||||||||||| |||||| |||| ||||||||    
T  31236102 ctctgcttatcactttattacttagtaaacgattcggtacactt 31236145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 40 - 241
Target Start/End: Original strand, 21666486 - 21666687
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 137  Q
    ||||||||| |||||||||  ||||||||||||| ||||||||| |||||||||||| | |  |||||| |||| |||  | | |  |||| ||||||||    
T  21666486 gattcgaagaatcctaaccattgcttacttttctacaaccaaaa-caggtaaacttgttgtcttgcaaacagataaaaattactagtctttttaaccctt 21666584  T
Q  138 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 237  Q
    | ||||||||||||||| |||| |||||||||||||   |||| |||| ||||||  |||||| |||||||||||||| ||||||||| |||||||||||    
T  21666585 atcttttatatcgtcaa-cttataaaaataagtaacgagaattgtttggacgaaaggacaatccatgtggatacgatactctacttatcactttattact 21666683  T
Q  238 tggt 241  Q
    ||||    
T  21666684 tggt 21666687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 249
Target Start/End: Original strand, 16069440 - 16069638
Alignment:
Q  41 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaa-tatgcaactttataacccttaa 139  Q
    |||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||  |||| ||| | |||||| |||              
T  16069440 attcgaagaatcctaactgctgcttacttttctacaaccaaaa-caggtaaacttgctctgttgcaagcagataaaaatttgcaacctta---------- 16069528  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    |||||||| || |||||||||||||||||||||||  |||| ||  |||||||| ||||||  |||| ||| |||||| ||||||| |||||||||||||    
T  16069529 cttttataccgccaaacttacaaaaataagtaacaagaattgttcaaacgaaacgacaatccctgtgtatatgatattttacttatcactttattacttg 16069628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 244
Target Start/End: Original strand, 21987872 - 21988064
Alignment:
Q  41 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaac 140  Q
    |||| ||| ||||| |||||||||||||||| |||||||||||||||||||| |||||||| |||||| | || |||  |||||          | ||||    
T  21987872 attcaaagaatccttaccgctgcttacttttatgcaaccaaaaacaggtaaagttgctctgttgcaaacatataaaaattgcaa----------cctaac 21987961  T
Q  141 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 240  Q
    ||||||| |||| | |||||||||||||||||| | ||||  ||| ||||||  |||||||  | |||||||||| ||||||||| ||||||||| ||||    
T  21987962 ttttataccgtc-agcttacaaaaataagtaacgcgaattgattggacgaaatgacaatctccgaggatacgatactctacttatcactttattatttgg 21988060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 241
Target Start/End: Complemental strand, 22623112 - 22622910
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 137  Q
    |||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||| || |||   ||||  |||| ||||| ||    
T  22623112 gatttgaagaatcctaacagctgcttacttttctgcaacc-aaaacaggtaaacttgctctgttgcaaatatataaaaatggcaagtctttttaaccgtt 22623014  T
Q  138 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 237  Q
    |||||| ||| | ||||  | | |||| |||||||| | |||| |||| ||||||  ||||||  |  ||||| |||| |||||| || |||||||||||    
T  22623013 aactttaataccatcaacttaataaaattaagtaacgcgaattttttggacgaaaggacaatcccttaggatatgatactctactaatcactttattact 22622914  T
Q  238 tggt 241  Q
    ||||    
T  22622913 tggt 22622910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 244
Target Start/End: Original strand, 16916823 - 16917016
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||| | |||||| |||||| |||| |||  ||||||           |||    
T  16916823 gattcgaagaatcctacccgctgcttacttttctgcaaccaaaaacaggtaaattcgctctgttgcaaagagataaaaattgcaac-----------taa 16916911  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-ttactttattactt 238  Q
    |||||||| |||| ||| || |||||||||||||   |||| || | ||||||  ||||||  ||||||||||||| |||||||| | ||||||||||||    
T  16916912 cttttataccgtc-aacctataaaaataagtaacgagaattgttcggacgaaaggacaatccctgtggatacgatactctacttactaactttattactt 16917010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 13345337 - 13345433
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||| | |||| |||| || |||| |||||| ||||||||| |||| ||||||||| |||||||||||||||||||||||  ||||||||    
T  13345337 aaataagtaacgcgaattgtttggacaaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacaatttggtacactt 13345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 239
Target Start/End: Original strand, 14781743 - 14781930
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||||||| |||| | ||||||||||||||||||||||||||| |||||||| |||||| | || |||  |||||||            |    
T  14781743 gattcgaagaatcctaactgctgatcacttttctgcaaccaaaaacaggtaaatttgctctgatgcaaacatataaaaattgcaact------------a 14781830  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    ||||| | | |||||||||||||||||||||| |   |||| || | ||||||  |||||   ||||||||||||| |||||||| ||||||||||||||    
T  14781831 cttttttcttgtcaaacttacaaaaataagtatctagaatttttcggacgaaaggacaattcttgtggatacgatactctacttactactttattacttg 14781930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 16787724 - 16787809
Alignment:
Q  160 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||||||||||||| |||||| ||||  | |||| |||||||||||| |||||||| ||||||||| ||||||||||||| |||||    
T  16787724 caaaaataagtaacgcaaattgtttgggcaaaacgacaatctatgtgaatacgatactctacttatcactttattacttgataaac 16787809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 727588 - 727489
Alignment:
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    |||||||||||||||||| ||||||||||||||||  |||| || | |||||| |  ||||  ||||||| ||||| ||||||||| |||||||||||||    
T  727588 cttttatatcgtcaaactaacaaaaataagtaacaagaattgttcggacgaaagagtaatccttgtggatgcgatactctacttatcactttattacttg 727489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 24054099 - 24054001
Alignment:
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    |||||||| ||||||||||||| |||||||||||| ||||| ||   ||||||  ||||||  |||||||| |||| |||||||||||||||||||||||    
T  24054099 cttttataccgtcaaacttacataaataagtaacaaaaattgttgagacgaaaggacaatccctgtggata-gatactctacttattactttattacttg 24054001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 18825781 - 18825675
Alignment:
Q  135 cttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 234  Q
    |||||||||| |||||||||||||| |||| ||||||||  ||||| || |||| |||  |||| |  ||||||||||||| | ||||||| ||||||||    
T  18825781 cttaacttttgtatcgtcaaacttataaaattaagtaacgaaaattgttcgaactaaaggacaacccttgtggatacgatactttacttatcactttatt 18825682  T
Q  235 acttggt 241  Q
    |||||||    
T  18825681 acttggt 18825675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 25403978 - 25404036
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||||||| ||||||    
T  25403978 atcctaaccgctacttacttttctggaaccaaaaacaggtaaagttgctctgttgcaaa 25404036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 3591654 - 3591750
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||  | |||| |||| || |||| ||||||||||||||||||||| |||| |||| ||||||||||||| ||||| |||  ||||||||    
T  3591654 aaataagtaaggcgaattgtttggacaaaacgacaatctatgtggatacgatactctatttatcactttattacttgataaacgattttgtacactt 3591750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 17121377 - 17121421
Alignment:
Q  39 agattcgaaggatcctaaccgctgcttacttttctgcaaccaaaa 83  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  17121377 agattcgaagaatcctaaccgctgcttacttttctgcaaccaaaa 17121421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 18529079 - 18529137
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaat 109  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  18529079 atcctaaccactgcttacttttctacaacc-aaaacaggtaaacttgctctgttgcaaat 18529137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 28008328 - 28008283
Alignment:
Q  38 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaa 83  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  28008328 gagattcaaagaatcctaaccgctgcttacttttctgcaaccaaaa 28008283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 17837615 - 17837519
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||| | |||| |||  || |||  ||||||  |||||||| |||| ||||||||| |||||||||||||||||||||||  ||||||||    
T  17837615 aaataagtaacgcgaattgtttagacaaaatgacaatccttgtggatatgatactctacttataactttattacttggtaaacaatttggtacactt 17837519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 21334574 - 21334646
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaa 91  Q
    ||||| |||||| ||||  | ||||||||| ||||||||||||| |||||||||| |||||||||| ||||||    
T  21334574 tccaacaatatagacaggggggattcgaagaatcctaaccgctgtttacttttcttcaaccaaaaataggtaa 21334646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 23038037 - 23038108
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||| |||||| |||||||||||||| || |||||| ||||||||||||||||||| |||  ||||||||    
T  23038037 acgaaacgacaatccatgtggatacgatactc-acttatcactttattacttggtaaacgatttggtacactt 23038108  T

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Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 14779684 - 14779582
Alignment:
Q  141 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 240  Q
    |||||||||||||| ||||||||||||| |||| | |  | |||| ||||||| ||||||  |||||||| |||| |||| |||| || |||||||||||    
T  14779684 ttttatatcgtcaa-cttacaaaaataaataacgcgatatgtttggacgaaacgacaatccctgtggatatgatactctaattatcacattattacttgg 14779586  T
Q  241 taaa 244  Q
    ||||    
T  14779585 taaa 14779582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 24214643 - 24214560
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||||  || || |||  |||||||||||||| ||||||||||  || | ||||||| |||||||||||||||||||    
T  24214643 aaaataagtaacgtaagttgtttagacgaaacaacaatccatgtggatacagtactgtacttatcactttattacttggtaaac 24214560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 24281376 - 24281293
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||||||||||| |||||| || | |  |||| | |||| ||||||||| |||| ||||||||| |||||||||||||||||||    
T  24281376 aaaataagtaacgcaaattgttcggaaaaaacgataatccatgtggatatgataatctacttatcactttattacttggtaaac 24281293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 51473875 - 51473950
Alignment:
Q  161 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    ||||| ||||||| |||||| |||| || |||| |||||| || ||||||||||| ||||||||| ||||||||||    
T  51473875 aaaaacaagtaacgcaaattgtttggacaaaacgacaatccatatggatacgatactctacttatcactttattac 51473950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 18830607 - 18830501
Alignment:
Q  135 cttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 234  Q
    ||||||||||||| ||||||| ||| |||||||||||| |  |||| |||| ||||||  ||||||  ||||||||||||| | ||  ||| ||||| ||    
T  18830607 cttaacttttataccgtcaaaattaaaaaaataagtaaaaagaattgtttggacgaaaggacaatccctgtggatacgataatttaagtatcactttgtt 18830508  T
Q  235 acttggt 241  Q
    |||||||    
T  18830507 acttggt 18830501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 21847717 - 21847636
Alignment:
Q  177 aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||| |||| ||||||| |||||| |||||||||| ||| ||||||||  ||||||||||||||||||| |||  ||||||||    
T  21847717 aattgtttggacgaaacgacaatccatgtggatacaatactctacttag-actttattacttggtaaacgatttggtacactt 21847636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 24306346 - 24306388
Alignment:
Q  203 tgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  24306346 tgtggatacgatactctacttatcactttattacttggtaaac 24306388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 9787904 - 9787961
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||| ||||| ||| ||||||||||| ||||||||| ||||||||||||| ||||    
T  9787904 acgaaacgacaatttatatggatacgatactctacttatcactttattacttgctaaa 9787961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 9787769 - 9787823
Alignment:
Q  53 ctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    ||||||||  |||||||||||||||||||||||||||  |||||||||| ||||||    
T  9787769 ctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgttgcaaa 9787823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 18100905 - 18100989
Alignment:
Q  54 taaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact 141  Q
    |||||||||||||||||||||||||| |||||| || |||||||| || |||||| |||| |||  ||||| ||| ||||||||||||    
T  18100905 taaccgctgcttacttttctgcaacc-aaaacatgt-aacttgctatgttgcaaacagataaaaattgcaa-tttctaacccttaact 18100989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 21973097 - 21973134
Alignment:
Q  53 ctaaccgctgcttacttttctgcaaccaaaaacaggtaa 91  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  21973097 ctaaccgctg-ttacttttctgcaaccaaaaacaggtaa 21973134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 34481027 - 34480985
Alignment:
Q  203 tgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||  ||||||||||||| |||||||||||||||||||    
T  34481027 tgtggatataatattctacttatcactttattacttggtaaac 34480985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 44795447 - 44795386
Alignment:
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    |||| ||||||| |||||| |||||||||||||| || ||||||  |||||||||||||||||    
T  44795447 tttggacgaaacgacaatccatgtggatacgatactc-acttatctctttattacttggtaaa 44795386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 22664263 - 22664222
Alignment:
Q  204 gtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||| |||| ||||||||| |||||||||||||||||||    
T  22664263 gtggataagatactctacttatcactttattacttggtaaac 22664222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 23179920 - 23179819
Alignment:
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-ttactttattact 237  Q
    ||||||||| |||||||||||||||||||| ||||   |||| || | ||||||  ||||||  |||||||| |||| |||| ||| | |||||||||||    
T  23179920 acttttataccgtcaaacttacaaaaataaataacgagaattgttcggacgaaaggacaatccctgtggatatgatactctatttactaactttattact 23179821  T
Q  238 tg 239  Q
    ||    
T  23179820 tg 23179819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 24267807 - 24267864
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||||||||||||| |||||| |||| | ||||||| | ||||||||||| ||||    
T  24267807 acgaaacaacaatctatatggatatgatactatacttatcattttattacttgataaa 24267864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 27117720 - 27117801
Alignment:
Q  164 aataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||||||||| || ||| ||||   ||||| |||||  ||||| |||| ||| ||||||||| |||||||||||||||||||    
T  27117720 aataagtaacgcagattgtttggttgaaacgacaattcatgtgaatacaatactctacttatcactttattacttggtaaac 27117801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 22664417 - 22664385
Alignment:
Q  51 tcctaaccgctgcttacttttctgcaaccaaaa 83  Q
    ||||||||||| |||||||||||||||||||||    
T  22664417 tcctaaccgctacttacttttctgcaaccaaaa 22664385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 23180006 - 23179962
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaa 84  Q
    ||||||||  ||||| |||||||||||||||||| ||||||||||    
T  23180006 gattcgaataatccttaccgctgcttacttttctccaaccaaaaa 23179962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 26540953 - 26540898
Alignment:
Q  203 tgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| |||  ||||||||    
T  26540953 tgtggatacgatactctacttac-actttattacttggtaaacgatttggtacactt 26540898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 33190888 - 33190856
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaa 82  Q
    |||||||||||||||||||||||||||| ||||    
T  33190888 atcctaaccgctgcttacttttctgcaatcaaa 33190856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 2e-59; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 17743333 - 17743573
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| ||||||||| || ||||||| ||  ||||||||||| |||| ||||||| ||||||||||||||||||||||||  | |||||| |||| |||     
T  17743333 tccaacaatataaacggaggagattcaaataatcctaaccgcggcttccttttctacaaccaaaaacaggtaaacttgcttagttgcaaaaagataaaaa 17743432  T
Q  119 atgcaactttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattc 218  Q
     ||||||| | |||||||||||||||||||||| |||||| |||||||||||||||| |||| |||| ||||||| | |||| |||||||||||||| ||    
T  17743433 ttgcaactctctaacccttaacttttatatcgttaaacttgcaaaaataagtaacacgaattgtttggacgaaacgataatccatgtggatacgatactc 17743532  T
Q  219 tacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||| ||||||||||||||||||| |||  ||||||||    
T  17743533 tacttatcactttattacttggtaaacgatttggtacactt 17743573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 27908975 - 27909216
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||| ||  | ||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| |||| |||     
T  27908975 tccaacaatataaataggggggattcgaagaatcctaaccgctgcttaattttctgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaa 27909073  T
Q  119 atgcaactttataaccctt--aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatat 216  Q
     |||||| || ||||||||  ||||||||||||||||||||||||||||||||||||   |||| |||| | ||||||| || | ||||||||||||||     
T  27909074 ttgcaacgttctaacccttttaacttttatatcgtcaaacttacaaaaataagtaacgtgaattgtttggatgaaacaataacccatgtggatacgatac 27909173  T
Q  217 tctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||| ||||||||||||||||||| |||  ||||||||    
T  27909174 tctacttatcactttattacttggtaaacgatttggtacactt 27909216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 29719109 - 29719328
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| | | || |||  ||||||| | |||||||||     
T  29719109 gattcgaagaatcctaactgctgcttacttttctgcaaccaaacacaggtaaacttgctctgttgcatacatataaaaattgcaactctctaacccttat 29719208  T
Q  140 cttttat---atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
     ||||||   | |||||||||   ||||||||||||| | |||| |||||||||||| ||||||  ||||||||||||| ||||||||| ||||||||||    
T  29719209 attttattataccgtcaaact---aaaaataagtaacgcgaattgtttgaacgaaacgacaatccttgtggatacgataatctacttatcactttattac 29719305  T
Q  237 ttggtaaacaattcagtacactt 259  Q
    ||||||||| |||  ||||||||    
T  29719306 ttggtaaacgatttggtacactt 29719328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 243
Target Start/End: Complemental strand, 28925764 - 28925539
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| ||||||| || | | ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||| || |||||| | || |||     
T  28925764 tccaacaatataagcataggggattcgaagaatcctaacctctgcttacttttctgcaaccaaaa-caggtaaacttgctatgttgcaaacaaataaaaa 28925666  T
Q  119 atgcaa-ctttataacccttaa-cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatat 216  Q
     ||||| |||| |||||||| | ||||||||||||||||||||||||||||| |||||  |||| |||| ||||||| |||||| | |||||||| |       
T  28925665 ttgcaagctttctaaccctttatcttttatatcgtcaaacttacaaaaataaataacatgaattgtttggacgaaacgacaatccacgtggatacaacgc 28925566  T
Q  217 tctacttattactttattacttggtaa 243  Q
    ||||||||| |||||||||||||||||    
T  28925565 tctacttatcactttattacttggtaa 28925539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 55 - 259
Target Start/End: Original strand, 31804791 - 31804997
Alignment:
Q  55 aaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttat---atcgt 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |  |||||| | || |||  ||||||| | ||||||||| |||||||   |||||    
T  31804791 aaccgctgcttacttttctgcaaccaaaaacaggtaaatttgctttattgcaaacaaataaaaattgcaactctctaacccttatcttttattatatcgt 31804890  T
Q  152 caaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattca 251  Q
    ||| ||||||||||||||||||||| |||  ||| |||||||  |||||| ||||||||| ||| ||||||||| ||||||||| |||||||||||||      
T  31804891 caa-cttacaaaaataagtaacacagattggttggacgaaacggcaatctctgtggatacaatactctacttatcactttattatttggtaaacaatttg 31804989  T
Q  252 gtacactt 259  Q
    ||||||||    
T  31804990 gtacactt 31804997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 25 - 244
Target Start/End: Complemental strand, 15339475 - 15339255
Alignment:
Q  25 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 124  Q
    |||||||| ||| | |||| |||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| |||||| | || |||  |||||    
T  15339475 aatataaatagaggggatttgaagaatcctaactgctgcttacttttctgcaacaaaaaacagataaacttgctctgttgcaaacaaataaaaattgcaa 15339376  T
Q  125 ctttataacccttaactt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctac 221  Q
    || | ||||||||| |||   ||||||| |  ||||||| ||| |||||||| | |||| |||| ||||||| |||||| ||||||||| |||| |||||    
T  15339375 ctctctaacccttatcttttattatatcct-taacttac-aaagtaagtaacgctaattgtttggacgaaacgacaatccatgtggatatgatactctac 15339278  T
Q  222 ttattactttattacttggtaaa 244  Q
    || | ||||||||||||||||||    
T  15339277 ttttcactttattacttggtaaa 15339255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 256
Target Start/End: Complemental strand, 17349591 - 17349362
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||| ||| | ||||||||| || || |||||||||||||||| |||||||||||||| |||||||||||||| |||||| |||| |||     
T  17349591 tccaacaatataaatagaggggattcgaagaattctgaccgctgcttacttttttgcaaccaaaaacaagtaaacttgctctgttgcaaacagataaaaa 17349492  T
Q  119 atgcaactttataacccttaactt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgata 215  Q
     |||        |||||||| |||   |||||||||| ||||||| |||||||||||| | || | |||| ||||||| ||||||| |||||||||||||    
T  17349491 ttgc--------aacccttatcttttattatatcgtc-aacttac-aaaataagtaacgcgaaatgtttggacgaaacgacaatctttgtggatacgata 17349402  T
Q  216 ttctacttattactttattacttggtaaacaattcagtaca 256  Q
     ||||||||  ||||||||||||||||||| ||| ||||||    
T  17349401 ctctactta-cactttattacttggtaaacgatttagtaca 17349362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 244
Target Start/End: Complemental strand, 30411889 - 30411695
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||| |||  |||||          | ||     
T  30411889 gattcgaaaaatcctaaccgctgcttacttttctgcaaccaaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaa----------cctat 30411800  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    ||||||||  |||||| ||||||||||||||||| |||||| || | ||||||  ||||||  ||| ||||||||| ||||||||| |||||||||| ||    
T  30411799 cttttatactgtcaaaattacaaaaataagtaacgcaaattgttgggacgaaatgacaatccctgttgatacgatactctacttatcactttattacatg 30411700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 43 - 245
Target Start/End: Complemental strand, 25196229 - 25196026
Alignment:
Q  43 tcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataacccttaac 140  Q
    |||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||| || |||||| | || |||  | |||  |||| ||||| |||||    
T  25196229 tcgaagaatcctaaccactgcttacttttttgcaaccaaaa-caggtaaacttgctatgttgcaaacatataaaaatttcaagtctttttaaccattaac 25196131  T
Q  141 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 240  Q
    || |||||||||||  | | |||||||||||||   |||| |||| ||||||  |||| |  |||||||| |||| ||||||||| ||||||||||||||    
T  25196130 ttatatatcgtcaacttaataaaaataagtaacgtgaattgtttggacgaaaggacaacccctgtggatatgatactctacttatcactttattacttgg 25196031  T
Q  241 taaac 245  Q
    |||||    
T  25196030 taaac 25196026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 24090905 - 24091003
Alignment:
Q  141 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    ||||||| ||||||||||||||||||||||||||  |||| |||| ||||||  |||||| ||||||||||||||||||| |||| |||||||||||||    
T  24090905 ttttataccgtcaaacttacaaaaataagtaacaagaattgtttggacgaaaggacaatccatgtggatacgatattctatttatcactttattacttg 24091003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 29143184 - 29142983
Alignment:
Q  27 tataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 126  Q
    |||| ||||| | ||||||||| ||| ||||||||| |||||||||| |||||||||  |||||||||||||||| |||||| |||| |||  |||||||    
T  29143184 tatatacagaggggattcgaagaatcttaaccgctgtttacttttctacaaccaaaat-aggtaaacttgctctgttgcaaacagataaaaattgcaact 29143086  T
Q  127 ttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttatt 226  Q
               |||||||||| ||||||||||||||||||||||||| | |||| || |||||||   |||||| ||||||||||| || |||||||||     
T  29143085 a----------aacttttataccgtcaaacttacaaaaataagtaacgcgaattgttcgaacgaacggacaatccatgtggatacggtactctacttatc 29142996  T
Q  227 actttattacttg 239  Q
      |||||||||||    
T  29142995 gttttattacttg 29142983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 51 - 261
Target Start/End: Complemental strand, 32085673 - 32085463
Alignment:
Q  51 tcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact-------tt 143  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||| |||| |||  ||||| | | |||| |||||||       ||    
T  32085673 tcctaaccgctgcttacttttctgcaaccaaac-caggtaa-cttgctctgttgcaaacagataaaaattgcaa-tctctaactcttaactcttttattt 32085577  T
Q  144 tatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 243  Q
    ||||||||||| ||||   ||||||||||||| |  | |||  ||||||| |||||| ||||||||| |||| ||||||||| |||||||||||||||||    
T  32085576 tatatcgtcaa-ctta---aaataagtaacacgagctgtttagacgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaa 32085481  T
Q  244 acaattcagtacacttac 261  Q
    ||||||  ||||||||||    
T  32085480 acaatttggtacacttac 32085463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 245
Target Start/End: Original strand, 17635631 - 17635858
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||  |  |||||||  || ||||| |||| ||| || ||||||||||||| ||||||||||||||||| |||||| |||| |||     
T  17635631 tccaacaatataaacagggggaattcgaaaaattctaactgctgtttatttatctgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaa 17635729  T
Q  119 atgcaac-tttataaccctt--aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgata 215  Q
     |||||| ||| ||||||||  | |||||| |||||||| ||||||||||||||||||   | || |||  ||||||| ||||||| |||||||| |||     
T  17635730 ttgcaacctttctaacccttttatcttttacatcgtcaa-cttacaaaaataagtaacgtgagtttttttgacgaaacgacaatctctgtggatatgatt 17635828  T
Q  216 ttctacttattactttattacttggtaaac 245  Q
     ||||||| |  ||||||||||||||||||    
T  17635829 ctctacttttctctttattacttggtaaac 17635858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 245
Target Start/End: Original strand, 17675485 - 17675713
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||  |  |||||||  || |||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||| |||| |||     
T  17675485 tccaacaatataaacagggggaattcgaaaaattctaaccgctgtttatttttctgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaa 17675583  T
Q  119 atgcaa-ctttataaccc--ttaacttttatatcgtcaaacttacaaaaataagtaac-acaaattatttgaacgaaacaacaatctatgtggatacgat 214  Q
     ||||| |||| ||||||  ||| |||||| |||||| ||||||||||||||||||||   |  || |||  ||||||| ||||||| ||| |||| |||    
T  17675584 ttgcaacctttctaacccttttatcttttacatcgtc-aacttacaaaaataagtaacgtgagttttttttgacgaaacgacaatctctgttgatatgat 17675682  T
Q  215 attctacttattactttattacttggtaaac 245  Q
      ||||||| |  ||||||||||||||||||    
T  17675683 tctctacttttctctttattacttggtaaac 17675713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 25618777 - 25618574
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| || | ||||||||||||||||||||||||| ||||||||||||||| ||||| |||||| |||| |||  ||||| | | ||||  || |    
T  25618777 gattcgaagaattcgaaccgctgcttacttttctgcaacc-aaaacaggtaaactttctctgttgcaaacagataaaaattgcaaatctctaacttttca 25618679  T
Q  140 c-----ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 234  Q
    |     | |||||||||| ||||   |||||||||| || | |||| |||  ||||||| |||||| ||||||||| |||| ||||||||| ||||||||    
T  25618678 ctcttttattatatcgtc-aact---aaaaataagttacgcgaattgtttagacgaaacgacaatccatgtggatatgatactctacttatcactttatt 25618583  T
Q  235 acttggtaa 243  Q
    |||||||||    
T  25618582 acttggtaa 25618574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 26603237 - 26603309
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||    
T  26603237 gattcgaagaatcctaaccgctgcttacttttctacaaccaaaaacaggtaaac-tgctctgttgcaaacagat 26603309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 45621880 - 45621978
Alignment:
Q  161 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||||| |||| |||| ||||||| ||||||  ||| ||||||||| ||||||| | ||||||||||||||||||| |||  ||||||||    
T  45621880 aaaaataagtaacacgaattgtttggacgaaacgacaatccttgtagatacgatactctacttctcactttattacttggtaaacgattttgtacactt 45621978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 20174635 - 20174732
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||  |||| |||| ||||||| |||||| ||||||| | |||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  20174635 aaaataagtaacatgaattgtttggacgaaacgacaatccatgtggaaatgatactctacttatcactttattacttggtaaacgatttggtacactt 20174732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 17198078 - 17198010
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| |||| || | |||||||||||||    
T  17198078 gattcgaagaatcttaaccgctgcttacttttctgcaaccaaaaataggtgaattcgctctgctgcaaa 17198010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 239
Target Start/End: Complemental strand, 25535483 - 25535296
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||| |||||||| |  | ||| ||||||||||| |||  ||||||||           |    
T  25535483 gattcgaagaatcccaaccgctgcttacttttttgcaaccaaaa-caggtaaattcacgctgttgcaaatagataaaaattgcaactt-----------a 25535396  T
Q  140 cttttatatcgtcaaactt-acaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    |||||| | ||||||| || ||||||||||||||||  |||| || | ||||||  ||||||  ||||||||||||| ||||||||| ||||||||||||    
T  25535395 ctttta-accgtcaaagttcacaaaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctacttatcactttattactt 25535297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 25888247 - 25888317
Alignment:
Q  189 gaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||| |||||| |||||||||||||| | ||||||| |||||||||||||||||||||||  ||||||||    
T  25888247 gaaacgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacaatttggtacactt 25888317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 26667516 - 26667464
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 92  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  26667516 gattcgaagaatcctaaccgctgtttacttttctgcaaccgaaaacaggtaaa 26667464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 245
Target Start/End: Original strand, 11382654 - 11382836
Alignment:
Q  64 ttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact--tttat---atcgtcaaactt 158  Q
    |||||||||| |||| ||||||| |||| ||||||||| |||||| |||| |||| ||||| | | ||||  ||||||  |||||   |||||||||||     
T  11382654 ttacttttctacaacaaaaaacaagtaa-cttgctctgttgcaaacagataaaatttgcaaatctctaacttttaactcttttatcttatcgtcaaact- 11382751  T
Q  159 acaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
      ||||||||||||| | ||||||||| | ||||  |||||  ||||||||| |||| ||||||||| |||||||||  ||||||||    
T  11382752 --aaaaataagtaacgcgaattatttggatgaaaatacaattcatgtggatatgatactctacttatcactttattatctggtaaac 11382836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 12953293 - 12953376
Alignment:
Q  161 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||||||||| | |||| |||  ||||||| |||||| ||||||| || ||| ||||||||||||||||||||||| ||||    
T  12953293 aaaaataagtaacgcgaattgttttgacgaaacgacaatccatgtggacacaatactctacttattactttattacttgataaa 12953376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 25530657 - 25530571
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactt 127  Q
    ||||||||| ||||||||||||||||||| || ||||||| |||||||||||| | |||||| |||||| |||| |||  ||||||||    
T  25530657 gattcgaagaatcctaaccgctgcttactattttgcaacc-aaaacaggtaaattcgctctgttgcaaacagataaaaattgcaactt 25530571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 60 - 224
Target Start/End: Complemental strand, 25920455 - 25920303
Alignment:
Q  60 ctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgtcaaactta 159  Q
    ||||| ||||||||||||||||||||||||||| | |||||| |||||| |||| |||  ||||||           |||||||||||  ||| ||||||    
T  25920455 ctgctcacttttctgcaaccaaaaacaggtaaaatcgctctgttgcaaacagataaaaattgcaac-----------taacttttataatgtc-aactta 25920368  T
Q  160 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta 224  Q
    ||||||||||||||   |||| || | ||||||  |||||| |||||||||||||| ||||||||    
T  25920367 caaaaataagtaacgagaattgttcggacgaaaggacaatccatgtggatacgatactctactta 25920303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 8447083 - 8447146
Alignment:
Q  195 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||||| |||  ||||||||    
T  8447083 acaatccatgtggatacgataatctactta-tactttattacttggtaaacgatttggtacactt 8447146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 12953225 - 12953289
Alignment:
Q  44 cgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    ||||| ||| ||| || |||||||||||||||||||||||||| ||||||||||| || ||||||    
T  12953225 cgaagaatcgtaatcgttgcttacttttctgcaaccaaaaacatgtaaacttgctatgttgcaaa 12953289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 24090816 - 24090867
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 92  Q
    ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  24090816 gattcgaagcatcctaaccactgcttacttttctgcaacc-aaaacaggtaaa 24090867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 29027595 - 29027512
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||||||||||| ||||||||||| || ||||||||||  ||||| |||| ||| ||| || || ||||||||| |||||||||    
T  29027595 aaaataagtaacgcaaattatttgcacaaaacaacaattcatgtgaatacaatactctgctcatcactttattatttggtaaac 29027512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 30900848 - 30900931
Alignment:
Q  166 taagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 249  Q
    |||||||| | |||| |||  ||||||||||||| || |||||||| ||| |||| |||| ||||||||| |||||||||||||    
T  30900848 taagtaacgcgaattgtttagacgaaacaacaatatacgtggatacaatactctagttatcactttattatttggtaaacaatt 30900931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 25887760 - 25887853
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||| |||||||| ||  | |||| |||| ||| ||| ||||| ||||||||||||||||||||| |||| ||||||||||| |||||| ||||    
T  25887760 tccaacaatataaataggggggatttgaagaatcataatcgctggttacttttctgcaaccaaaaataggt-aacttgctctgttgcaaacagat 25887853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 9774334 - 9774414
Alignment:
Q  161 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 243  Q
    ||||||||||||| ||||||  ||| || |||| |||||| |||||||||||||| |||||  || |||||||| ||||||||    
T  9774334 aaaaataagtaacgcaaattggttggacaaaacgacaatccatgtggatacgatactctac--atcactttattccttggtaa 9774414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 25885460 - 25885542
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||||||||||| |||| ||||||| |||||   ||||||||||||| | | ||||| || ||||||||| ||||||    
T  25885460 aaaataagtaacacaaattgtttggacgaaacgacaattcttgtggatacgatactattcttatcac-ttattactttgtaaac 25885542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 26603348 - 26603447
Alignment:
Q  160 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||||   |||| |||| ||||||  |||||| || |  |||||||| ||||||||| ||||| ||||||| |||||||||  ||||||||    
T  26603348 caaaaataagtaacgtcaattgtttgcacgaaaagacaatccatataaatacgatactctacttatcacttttttacttgataaacaatttggtacactt 26603447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 8503103 - 8503167
Alignment:
Q  195 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||| ||||||||| |||  ||||||||| || |||||||||||||||| |||  ||||||||    
T  8503103 acaatccatgtggatatgatcctctacttatcacgttattacttggtaaacgatttggtacactt 8503167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 23011764 - 23011859
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||| |||| |||||| |||  || |||| ||||||  ||||||||| ||| ||||||||  |||||||||||||||||| ||||  ||||||||    
T  23011764 aaataaataacgcaaattgtttagacaaaacgacaatccttgtggatacaataatctacttac-actttattacttggtaaaaaatttggtacactt 23011859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 25530505 - 25530469
Alignment:
Q  203 tgtggatacgatattctacttattactttattacttg 239  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  25530505 tgtggatacgatactctacttatcactttattacttg 25530469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 27418465 - 27418389
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    |||||||||||||| |||| ||||   ||||  | |||| ||||||||| |||| ||||||||| ||||||||||||    
T  27418465 aaaataagtaacacgaattgtttggttgaaatgataatccatgtggatatgatactctacttatcactttattactt 27418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 45553228 - 45553132
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||| |||||| ||||  ||| || |||| ||||||  |||  |||||||||| ||||||| ||||||||||||| ||||| |||  ||||||||    
T  45553228 aaataattaacacgaattgcttggacaaaacgacaatccctgtaaatacgatattttacttatcactttattacttgataaacgatttggtacactt 45553132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 45 - 259
Target Start/End: Original strand, 29382243 - 29382458
Alignment:
Q  45 gaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataacccttaacttt 143  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||| || |||||| |||| |||  ||||| |||| ||||| ||||||||    
T  29382243 gaagaatcctaaccactgcttacttttctgcaaccaaaaataggtacacttgctatgttgcaaacagataaaaattgcaagctttctaaccattaacttt 29382342  T
Q  144 tatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 243  Q
    |||||||||||||||||||||||||||||| |||||| |||| | ||||| ||||||  ||||||||||||| ||||||||| |||||||||||||||||    
T  29382343 tatatcgtcaaacttacaaaaataagtaacgcaaattgtttggatgaaacgacaatccctgtggatacgatactctacttatcactttattacttggtaa 29382442  T
Q  244 acaattcagtacactt 259  Q
    || |||  ||||||||    
T  29382443 acgatttggtacactt 29382458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 24114140 - 24114379
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||| ||  | ||||||||| ||||||||||||||||||||||| |  ||||||| |||||||||||||||||||||||| |||| |||     
T  24114140 tccaacaatataaataggggggattcgaagaatcctaaccgctgcttacttttcagataccaaaa-caggtaaacttgctctgctgcaaacagataaaaa 24114238  T
Q  119 atgcaac-tttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatatt 217  Q
     |||||| ||||||||||||| ||||||||||||||| |||||||||||||||||| ||| || |||| ||||||| ||||||  || |||||||||| |    
T  24114239 ttgcaacctttataacccttatcttttatatcgtcaa-cttacaaaaataagtaacgcaagttgtttggacgaaacgacaatccctgcggatacgatact 24114337  T
Q  218 ctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||| | |||||||||||||||||||||  ||||||||    
T  24114338 ctacttatcattttattacttggtaaacaatttggtacactt 24114379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 24269839 - 24269600
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||  | ||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| |||| ||      
T  24269839 tccaacaatataaacaggggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaac-tactctgttgcaaacagataaaga 24269741  T
Q  119 atgcaact-ttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatatt 217  Q
     ||||||| ||  ||| ||||  ||||||| |||||||||||||||||||| |||    |||| |||| ||||||| ||||||  ||||||||||||| |    
T  24269740 ttgcaactattcaaactcttattttttataccgtcaaacttacaaaaataaataatgtgaattgtttggacgaaacgacaatccctgtggatacgatact 24269641  T
Q  218 ctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||  |||||||||||||||||| ||||  ||||||||    
T  24269640 ctactta-cactttattacttggtaaataatttggtacactt 24269600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 55 - 238
Target Start/End: Complemental strand, 27659642 - 27659468
Alignment:
Q  55 aaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgtcaa 154  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||  |||||||||||||||  ||||||        ||||| |||||||||||||||    
T  27659642 aaccgctgcttaattttctgcaacaaaaaacaggtaaacttgctcttttgcaaatagattaaaattgcaac--------ccttatcttttatatcgtcaa 27659551  T
Q  155 acttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
     |||||||||||||||||| |  | | |||| ||||||| ||||||  ||| ||||||||| ||||||||| ||||||||||||    
T  27659550 -cttacaaaaataagtaactcggaatgtttggacgaaacgacaatccttgtagatacgatactctacttatcactttattactt 27659468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 244
Target Start/End: Original strand, 13314869 - 13315074
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| ||| |||||| |||||||||||||||||||||||||||||||| ||| || | |||||| | || |||  ||||||| | ||||  |||     
T  13314869 gattcgaagaatcttaaccgttgcttacttttctgcaaccaaaaacaggtaaatttgttcagttgcaaacatataaaaattgcaactctctaacgtttat 13314968  T
Q  140 ctt---ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    |||   |||||||||| ||||||  |||||||||||| | |||| |||| ||||||||| |||| |||||||||||||| | ||||||| ||||||||||    
T  13314969 cttttattatatcgtc-aactta-taaaataagtaacgcgaattgtttggacgaaacaaaaatccatgtggatacgatactatacttatcactttattac 13315066  T
Q  237 ttggtaaa 244  Q
    ||||||||    
T  13315067 ttggtaaa 13315074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 59 - 241
Target Start/End: Complemental strand, 17509447 - 17509266
Alignment:
Q  59 gctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact-ttataacccttaacttttatatcgtcaaact 157  Q
    ||||||||||||| |||||| |||||||||||||||||||||  |||||| || | |||  ||||| | || |||||||||| ||||||| |||||| ||    
T  17509447 gctgcttacttttttgcaac-aaaaacaggtaaacttgctctattgcaaacaggtgaaaattgcaagtcttttaacccttaatttttataccgtcaa-ct 17509350  T
Q  158 tacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggt 241  Q
    || ||||||||||||    |||| |||| |||||| ||||||| ||||||||| |||| ||||||||| |||||||||||||||    
T  17509349 tataaaaataagtaaagagaattgtttggacgaaagaacaatccatgtggatatgatactctacttatcactttattacttggt 17509266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 54 - 244
Target Start/End: Original strand, 18448433 - 18448624
Alignment:
Q  54 taaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataacccttaa-cttttatatcg 150  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||| |||| |||  |||||  |||| ||||| || | |||||||||||    
T  18448433 taaccgttgcttacttttatgcaaccaaaaacaggtaa-cttgctctgttgcaaacagataaaaactgcaagactttctaaccatttatcttttatatcg 18448531  T
Q  151 tcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    |||| |||| |||||||||||||   |||| |||| || |||| ||||||| | | ||||||||  |||| |||||||||||||||||||||||    
T  18448532 tcaa-cttataaaaataagtaacgagaattgtttggacaaaacgacaatctctattgatacgatgctctaattattactttattacttggtaaa 18448624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 50 - 245
Target Start/End: Original strand, 17101792 - 17101976
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatc 149  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||||| |||||| |||| |||  || ||| |          | |||||||| |    
T  17101792 atcctaaccactgcttacttttttgcaatcaaaaacaggtaaacttgctctgttgcaaacagataaaaattggaacct----------atcttttatacc 17101881  T
Q  150 gtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||| |||||||| |||||||||||| ||| |||| | ||||| ||||||  | ||||||||||| ||||||||| |||||||||||||||||||    
T  17101882 gtcaa-cttacaaatataagtaacacatattgtttggatgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaac 17101976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 24110526 - 24110670
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||  | ||||||||  ||||||||| |||||||||||||||||||| ||||||| ||||||| ||||| |||||| |||| ||||    
T  24110526 tccaacaatataaacaggggggattcgaataatcctaacccctgcttacttttctgcaacc-aaaacagataaacttcctctgttgcaaacagataaaat 24110624  T
Q  119 atgcaac-tttataacccttaacttttatatcgtcaaacttacaaaaa 165  Q
     |||||| ||| |||||||||  |||||||||||| ||||||||||||    
T  24110625 -tgcaacttttctaacccttatgttttatatcgtc-aacttacaaaaa 24110670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 259
Target Start/End: Complemental strand, 25226272 - 25226138
Alignment:
Q  124 actttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactt 223  Q
    ||||| ||||||||| |||||||||| ||||||||| ||||||| ||||| |||||| |||| | ||||||| ||||  |||  |||||||| || ||||    
T  25226272 actttctaaccctta-cttttatatcttcaaacttataaaaatatgtaacgcaaattgtttggaggaaacaataatccctgtatatacgatactcaactt 25226174  T
Q  224 attactttattacttggtaaacaattcagtacactt 259  Q
    || ||||||||||||| ||||| ||| |||||||||    
T  25226173 atcactttattacttgataaacgatttagtacactt 25226138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 239
Target Start/End: Original strand, 23893083 - 23893278
Alignment:
Q  32 acagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttata 131  Q
    ||||||| ||||| ||| ||||||||  ||  |||||||||||||||||||| |||||||| ||||| || |||||| |||| |||  ||||||| |       
T  23893083 acagatgggattcaaagaatcctaactactagttacttttctgcaaccaaaa-caggtaaatttgctttgttgcaaacagataaaaattgcaactat--- 23893178  T
Q  132 acccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattacttt 231  Q
            |||||||| ||||||||||||||||||||||||||  |||| || | || ||| |||||||||||| |||| |||| ||||||||| ||||     
T  23893179 --------cttttataccgtcaaacttacaaaaataagtaacaagaattgttcggacaaaagaacaatctatgttgatatgatactctacttatcacttc 23893270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 5851039 - 5850943
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||  ||| ||||   ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  5851039 aaataagtaacacggattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgattaggtacactt 5850943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 26394576 - 26394643
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| || ||||||    
T  26394576 gattcgaagaatcctaaccgttgcttacttttctgcaacc-aaaacaggtaaacttgctttgttgcaaa 26394643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 14528228 - 14528165
Alignment:
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||| ||||||| ||||||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  14528228 tttggacgaaacgacaatctatgtggatacgatactctacgtatcactttattacttggtaaac 14528165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 2637672 - 2637610
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 249  Q
    ||||||| |||||| |||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  2637672 acgaaacgacaatccatgtggatacgatactctacttatcactttattacttgataaacaatt 2637610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 30783774 - 30783824
Alignment:
Q  195 acaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  30783774 acaatctatgtggatacgatactctacttatcactttattacttggtaaac 30783824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 14626241 - 14626191
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctct 100  Q
    |||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  14626241 atcctaactgctgcttacttttctgcaaccaaaaaaaggtaaacatgctct 14626191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 25182316 - 25182377
Alignment:
Q  51 tcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    |||||||| ||| || ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  25182316 tcctaaccactgtttccttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagat 25182377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 14075692 - 14075611
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||||||| || ||| ||||   ||||| |||||| |||||||||||||| ||||||||| ||||| ||||||||||||    
T  14075692 aaataagtaacgcacattgtttggttgaaacgacaatccatgtggatacgatagtctacttatcactttcttacttggtaaa 14075611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 15238896 - 15238811
Alignment:
Q  164 aataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaatt 249  Q
    |||||||||| | |||| |||  ||||||| |||||  |||||||||||||| ||||||||| | ||| |||||||||||||||||    
T  15238896 aataagtaacgcgaattgtttagacgaaacgacaattcatgtggatacgataatctacttatcattttcttacttggtaaacaatt 15238811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 56 - 239
Target Start/End: Complemental strand, 19264237 - 19264064
Alignment:
Q  56 accgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgtcaaa 155  Q
    |||||||||||| ||| | |||||||||| || ||||||||||||| |||||| |||| |||  | |||          ||||||||||||| | |||||    
T  19264237 accgctgcttaccttttttcaaccaaaaatagataaacttgctctgttgcaaaaagataaaaattacaa----------cttaacttttataacatcaaa 19264148  T
Q  156 cttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    ||||||||||||||||||   ||||| ||  | |||| ||||||| || || |||||||| |  |||||| |||||||||||||    
T  19264147 cttacaaaaataagtaacgagaattaatttgatgaaagaacaatccatatgaatacgatacttaacttatcactttattacttg 19264064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 6885069 - 6884960
Alignment:
Q  146 tatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||||||   ||||||||| | ||| || |||| ||||||| |||||| |||| ||||||||| || |||||| ||||||||||| |||| ||    
T  6885069 tatcgtcaaactta---aaataagtagcgcaagttgtttggacgaaacgacaatccatgtagatacgatactc-acttatcactttattactgggtacac 6884974  T
Q  246 aattcagtacactt 259  Q
     ||| |||||||||    
T  6884973 gatttagtacactt 6884960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 17976693 - 17976636
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||| | ||||| ||||||||||||| ||||||||| ||||||||||||| ||||    
T  17976693 acgaaacgaaaatctttgtggatacgatactctacttatcactttattacttgataaa 17976636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 18569284 - 18569204
Alignment:
Q  32 acagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||| ||||||| ||  ||| |||||||||||||||||||||||||| |||||| ||||||| ||| || |||||| ||||    
T  18569284 acagacgagattcaaaaaatcgtaaccgctgcttacttttctgcaacc-aaaacaagtaaactcgctatgttgcaaacagat 18569204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 24645042 - 24644989
Alignment:
Q  60 ctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||||||||||||||||||||||||||||||  ||| | || |||||||||||    
T  24645042 ctgcttacttttctgcaaccaaaaacaggtaactttgttatgttgcaaatagat 24644989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 16404020 - 16403952
Alignment:
Q  153 aaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctac 221  Q
    ||||||||||||||||||||||  |||| || | ||||||  |||||| |||||||||||||| |||||    
T  16404020 aaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctac 16403952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 16404122 - 16404055
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    ||||||||| ||||||||||||||||| ||||||||| || |||| ||||||| | |||||| ||||||    
T  16404122 gattcgaagaatcctaaccgctgcttatttttctgcagcc-aaaataggtaaattcgctctgttgcaaa 16404055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 34497194 - 34497131
Alignment:
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||| ||||||| ||| ||| | ||||||||||| |||||| || |||||||||||||||||||    
T  34497194 tttggacgaaacgacagtctctatggatacgatactctactaatcactttattacttggtaaac 34497131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 44010903 - 44010968
Alignment:
Q  42 ttcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    ||||||| ||| |||||||| |||||| ||||||||||||||||| || |||||| |||| ||||||    
T  44010903 ttcgaagaatcttaaccgctacttactcttctgcaaccaaaaacatgt-aacttgttctgttgcaaa 44010968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 44011049 - 44011106
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||| |||||| |||||||||||||| ||||||||  |||||||||||| ||||||    
T  44011049 acgaaacgacaatccatgtggatacgatactctactta-cactttattacttcgtaaac 44011106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 21314834 - 21314785
Alignment:
Q  51 tcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctct 100  Q
    ||||||||||| ||||||||| || ||| ||||||||| |||||||||||    
T  21314834 tcctaaccgctacttacttttatgtaactaaaaacaggcaaacttgctct 21314785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 244
Target Start/End: Original strand, 24110696 - 24110737
Alignment:
Q  203 tgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||||||||| ||||||||| | ||||||||||||||||    
T  24110696 tgtggatacgatactctacttatcattttattacttggtaaa 24110737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 30806475 - 30806573
Alignment:
Q  141 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatg-----tggatacgatattctacttattactttatta 235  Q
    |||||||||||||||||    |||||||||||| |||||| |||| | ||||| ||||||  ||     ||||||||||| ||||||||| |||||||||    
T  30806475 ttttatatcgtcaaact----aaaataagtaacgcaaattgtttggatgaaacgacaatccttgtggactggatacgatactctacttatcactttatta 30806570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 34497327 - 34497295
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaa 82  Q
    |||||||||||||||||||||||||||| ||||    
T  34497327 atcctaaccgctgcttacttttctgcaagcaaa 34497295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 6e-50; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 27737566 - 27737786
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||| |||| |||  ||||||| | |||||||||     
T  27737566 gattcgaagaatcctaaccgctgcttacttttttgcaac-aaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaactctctaacccttat 27737664  T
Q  140 cttttat---atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    |||| ||   |||||||| |||||||||||||||||| | |||| |||| ||||||||||||||  ||||| || |||| ||||||||| ||||||||||    
T  27737665 ctttcattttatcgtcaa-cttacaaaaataagtaacgcgaattgtttggacgaaacaacaatccttgtgggtatgatactctacttatcactttattac 27737763  T
Q  237 ttggtaaacaattcagtacactt 259  Q
    ||||||||| ||| |||||||||    
T  27737764 ttggtaaacgatttagtacactt 27737786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 38 - 245
Target Start/End: Complemental strand, 5624864 - 5624656
Alignment:
Q  38 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac-tttataaccct 136  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||| |||||  | |||| |||| |||  |||||| ||| |||||||    
T  5624864 gagattcgaagaatcctaaccgctgcttacttttctgcaaccaaaagccggtaaact-gctctattacaaacagataaaaattgcaacctttctaaccct 5624766  T
Q  137 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctat-gtggatacgatattctacttattactttatta 235  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||| || |||| ||||||| |  || ||| |||| ||||||||| |||||||||    
T  5624765 taacttttctatcgtcaaacttacaaaaataagtaacgcaaattgtttgcacaaaacgacaatctctattgtataagatactctacttatcactttatta 5624666  T
Q  236 cttggtaaac 245  Q
    ||||||||||    
T  5624665 cttggtaaac 5624656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 260
Target Start/End: Original strand, 23844322 - 23844563
Alignment:
Q  20 ccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaata 119  Q
    |||| |||||||||||  | ||||||||  |||||||||||||||||||||| ||||||||||| |||||||||||| |||  |||||| |||| |||      
T  23844322 ccaacaatataaacaggagggattcgaaaaatcctaaccgctgcttacttttatgcaaccaaaa-caggtaaacttggtctattgcaaacagataaaaat 23844420  T
Q  120 tgcaac-tttataaccctt--aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatat 216  Q
    |||||| ||| ||||||||  | ||||||||||||||| |||||||||||||||||| | | || |||| ||||||| ||||||  | | |||| ||||     
T  23844421 tgcaacatttctaacccttttatcttttatatcgtcaa-cttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccctttagatatgatac 23844519  T
Q  217 tctacttattactttattacttggtaaacaattcagtacactta 260  Q
    ||||||||| | ||||||||||||||||| |||  |||||||||    
T  23844520 tctacttatcattttattacttggtaaacgatttggtacactta 23844563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 40 - 180
Target Start/End: Complemental strand, 14637090 - 14636948
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat-taaatatgcaactttataaccctt- 137  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| || ||  ||||  ||| ||||| |||| ||||||||     
T  14637090 gattcgaagaatcctattcgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgtaataagataaaaaaatgcatctttctaaccctta 14636991  T
Q  138 aacttttatatcgtcaaacttacaaaaataagtaacacaaatt 180  Q
    || ||||||||||||||||||| ||||||||||||||| ||||    
T  14636990 aaattttatatcgtcaaacttataaaaataagtaacacgaatt 14636948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 40 - 245
Target Start/End: Original strand, 23231862 - 23232066
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact-ttataaccctta 138  Q
    ||||||||| ||||||| || |||||||||||||  |||||||| || ||||| |||||||| |||||| |||| |||| |||||   || ||||| |||    
T  23231862 gattcgaagaatcctaaacgttgcttacttttctataaccaaaa-caagtaaatttgctctgttgcaaacagataaaat-tgcaagacttctaaccgtta 23231959  T
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||| ||||| | |||||   | |||||| ||||  |||||||| ||||||||||||    
T  23231960 acttttatatcgtcaaacttacaaaaataagtaacgcgaattgtttggacgaaccgacaattcttatggatatgataccctacttatcactttattactt 23232059  T
Q  239 ggtaaac 245  Q
    |||||||    
T  23232060 ggtaaac 23232066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 259
Target Start/End: Complemental strand, 9516997 - 9516787
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac-tttataaccctt--aacttttat 146  Q
    |||||||  |||||||| |||||||||| |||||  ||||||||||||| || ||| || |||| |||  | |||| ||| ||||||||  | |||||||    
T  9516997 atcctaatggctgcttaattttctgcaatcaaaat-aggtaaacttgctatgttgctaacagataaaacttacaacctttctaacccttttatcttttat 9516899  T
Q  147 atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaaca 246  Q
    |||||||| |||||||||||||||||| | | || |||| ||||||| |||||| |||||||||||||| ||||||||| ||||||||||| |||||||     
T  9516898 atcgtcaa-cttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattactaggtaaacg 9516800  T
Q  247 attcagtacactt 259  Q
    |||  ||||||||    
T  9516799 atttggtacactt 9516787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 53 - 238
Target Start/End: Original strand, 17826986 - 17827168
Alignment:
Q  53 ctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact-ttataacccttaacttttatatcgt 151  Q
    ||||||| |||||||||||||||||||||||||| ||||||| ||| || |||||| | || |||  ||||||| || ||||||||| ||||||||| ||    
T  17826986 ctaaccgttgcttacttttctgcaaccaaaaacaagtaaact-gctatgttgcaaacatataaaaattgcaactcttttaacccttatcttttatattgt 17827084  T
Q  152 caaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    ||||   | ||||||||||||| | |||| |||| | ||||| |||||| |||||||||||||| |||| |||| ||||||||||||    
T  17827085 caaa---aaaaaaataagtaacgcgaattgtttggaagaaacgacaatccatgtggatacgatactctatttataactttattactt 17827168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 40 - 268
Target Start/End: Original strand, 27124372 - 27124598
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact-ttataaccctta 138  Q
    ||||| ||| ||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||| | || |||  || || | || |||||||||    
T  27124372 gattcaaagaatcttaaccgctgcttacttttctgcaacc-aagacaggtaaacttgctctgttgcaaacatataaaaattggaagtcttttaaccctta 27124470  T
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
      ||||||||||||||   | ||||||||||||||   |||| ||||  |||||| |||||| |||| ||||||||| | || |||| ||||||||||||    
T  27124471 tgttttatatcgtcaa--gttcaaaaataagtaacgagaattgtttgctcgaaacgacaatccatgtcgatacgataatataattatcactttattactt 27124568  T
Q  239 ggtaaacaattcagtacacttactatattc 268  Q
    ||||||| |||  |||||||| | ||||||    
T  27124569 ggtaaacgatttggtacactttccatattc 27124598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 245
Target Start/End: Original strand, 22410234 - 22410410
Alignment:
Q  69 tttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttat---atcgtcaaacttacaaaaa 165  Q
    |||||||||||||||| ||| |||||||||||| |||||| |||| |||  |||||  || ||||||||| |||||||   |||||||| ||||  ||||    
T  22410234 tttctgcaaccaaaaataggaaaacttgctctgttgcaaacagataaaaattgcaagattctaacccttatcttttattatatcgtcaa-ctta--aaaa 22410330  T
Q  166 taagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||   |||| |||||| ||||| ||||||  ||||||||||||| ||||||||| | |||||||||||||||||    
T  22410331 taagtaacgtgaattgtttgaatgaaacgacaatccctgtggatacgatactctacttatcattttattacttggtaaac 22410410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 9726120 - 9726024
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||| |||||| |||| ||||||| |||||| |||||||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  9726120 aaataagtaacgcaaattgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacactt 9726024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 22413026 - 22413126
Alignment:
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||| || | |||||| ||||||| |||| ||||||||| ||||||||| ||||||||||||    
T  22413026 acttttataccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaagaacaatccatgtagatacgatactctacttataactttattactt 22413125  T
Q  239 g 239  Q
    |    
T  22413126 g 22413126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 227
Target Start/End: Complemental strand, 11136119 - 11135941
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttct-gcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccctta 138  Q
    ||||||||| |||||||||||| ||||||||| | ||||||||||||||||||  | |||||| |||||| |||| |||  |||||| |          |    
T  11136119 gattcgaagaatcctaaccgcttcttactttttttgcaaccaaaaacaggtaagttcgctctgttgcaaacagataaaaattgcaacct----------a 11136030  T
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttatta 227  Q
    ||||||||| |||||||||||||||||||| |||||  |||||||   ||||||  ||||||| ||||||||||||| |||||||||||    
T  11136029 acttttataccgtcaaacttacaaaaataattaacaataattattcagacgaaaggacaatctctgtggatacgatactctacttatta 11135941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 24475298 - 24475147
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||  ||||||||||| ||||||||| || ||||||||||||||||| |||||||||||||||| | || |||||| |||| ||      
T  24475298 tccaacaatataaacaggggagattcgaagaatcctaaccactacttacttttctgcaacc-aaaacaggtaaacttgttttgttgcaaacagataaaga 24475200  T
Q  119 atgcaa-ctttataaccc-ttaacttttatatcgtcaaacttacaaaaataagt 170  Q
     ||||| |||| |||||| ||| ||||| ||||||| |||||||||||||||||    
T  24475199 ttgcaacctttctaaccctttatcttttttatcgtc-aacttacaaaaataagt 24475147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 239
Target Start/End: Original strand, 24657346 - 24657532
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| || ||||||||||||||||||||||||||||||| |||||||| | |||||| |||||| |||| |||  | ||||||           |    
T  24657346 gattcgaagaattctaaccgctgcttacttttctgcaaccaaaa-caggtaaattcgctctgttgcaaacagataaaaatttcaactt-----------a 24657433  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    |||| ||| ||||||||||||||||||||||||||  |||| || | |||||| |||||||  ||||||||||||| || |||||| | |||||||||||    
T  24657434 cttt-ataccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaaaacaatccctgtggatacgatactcgacttatcattttattacttg 24657532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 20005781 - 20005900
Alignment:
Q  26 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa- 124  Q
    ||||| ||||| | ||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||| |||||| |||||| | || |||  |||||     
T  20005781 atatatacagaggggattcgaagaatcttaaccgctgcatacctttctgcaaccaaaaacaggtaaactcgctctgttgcaaacaaataaaaattgcaag 20005880  T
Q  125 ctttataacccttaactttt 144  Q
    |||| |||||||||||||||    
T  20005881 ctttctaacccttaactttt 20005900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 17729231 - 17729152
Alignment:
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 261  Q
    |||| ||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||||    
T  17729231 tttggacgaaacgacaatctttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttac 17729152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 25927305 - 25927386
Alignment:
Q  164 aataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||   |||| |||| ||||||| | |||| |||||||||||||||||||||||| |||||||||||||||||||    
T  25927305 aataagtaacgtgaattgtttggacgaaactaaaatccatgtggatacgatattctacttatcactttattacttggtaaac 25927386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 21672434 - 21672518
Alignment:
Q  161 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||| ||||||||| |||| |||| ||||||  | |||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  21672434 aaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttggtaaac 21672518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 23009372 - 23009471
Alignment:
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||| | ||||  ||||||  ||||||||||||  ||||||||| |||||| |||||    
T  23009372 acttttatatcgtcaaacttacaaaaataagtaacaagaatt-tttggaagaaaggacaatccctgtggatacgatgctctacttatcactttaatactt 23009470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 23778992 - 23778893
Alignment:
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||| | ||||  ||||||  ||||||||||||  ||||||||| |||||| |||||    
T  23778992 acttttatatcgtcaaacttacaaaaataagtaacaagaatt-tttggaagaaaggacaatccctgtggatacgatgctctacttatcactttaatactt 23778894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 28933660 - 28933746
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaat 248  Q
    |||||||| |||||||||| |||| ||||||| | ||||  ||||||||||||| ||||||||| ||||||||| ||| ||||||||    
T  28933660 aaaataagcaacacaaattgtttggacgaaacgataatccttgtggatacgatactctacttatcactttattatttgctaaacaat 28933746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 11177049 - 11176952
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||| ||||||||  | ||||| |||| | |||||||||||||| ||||||||| |||||| |||| ||||||| |||  ||||||||    
T  11177049 aaaataagtaacacgaattatttcgaagaaacgacaacccatgtggatacgatactctacttatcactttagtactcggtaaacgattgggtacactt 11176952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 20144978 - 20145067
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    ||||| ||||||| |||| | ||||||||| ||||| |||||||||| |||||||||||| ||||| | |||||||| ||||| ||||||    
T  20144978 tccaacaatataaccagaggggattcgaagaatccttaccgctgcttgcttttctgcaactaaaaatacgtaaactttctctgttgcaaa 20145067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 22187861 - 22187772
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    ||||| ||||||| |||| | ||||||||| ||||| |||||||||| |||||||||||| ||||| | |||||||| ||||| ||||||    
T  22187861 tccaacaatataaccagaggggattcgaagaatccttaccgctgcttgcttttctgcaactaaaaatacgtaaactttctctgttgcaaa 22187772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 244
Target Start/End: Complemental strand, 23143838 - 23143739
Alignment:
Q  143 ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggta 242  Q
    |||||||||||| ||||||||| |||||||||  |||| |||| ||||||| ||||||  |||||||| |||| ||||||||| ||||||||| ||||||    
T  23143838 ttatatcgtcaa-cttacaaaa-taagtaacatgaattgtttggacgaaacgacaatccctgtggatatgatactctacttatcactttattaattggta 23143741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 21679850 - 21679934
Alignment:
Q  161 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||| ||||||||| |||| |||| ||||||  | |||| |||||||||||||| ||||||||| |||||||||||| ||||||    
T  21679850 aaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttagtaaac 21679934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 25782014 - 25781927
Alignment:
Q  25 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    |||||| ||||| | ||||||||| ||||||||  ||| |||||||||||||||| |||| |||||||||||||||| |||||| ||||    
T  25782014 aatatatacagaggggattcgaagaatcctaactactgtttacttttctgcaacc-aaaataggtaaacttgctctgttgcaaacagat 25781927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 18075386 - 18075485
Alignment:
Q  161 aaaaataagtaa-cacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||| | || ||| |||| || |||| |||||| | |||||||||||| ||| ||||| |||||||||||||||||||||||  ||||||||    
T  18075386 aaaaataagtaaactcagattgtttggacaaaacgacaatccacgtggatacgatactctgcttatcactttattacttggtaaacaatttcgtacactt 18075485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 17382275 - 17382218
Alignment:
Q  55 aaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| |||||| ||||    
T  17382275 aaccgctgcttacttttctgcaacc-aaaacatgtaaacttgctctgttgcaaacagat 17382218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 21841663 - 21841765
Alignment:
Q  137 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    ||||||||||| ||||||||||||||||||||||||||  || | || | ||||||  |||||| |||||||| | | | |||||||||  |||||||||    
T  21841663 taacttttataccgtcaaacttacaaaaataagtaacaagaaatgttcggacgaaaggacaatccatgtggattcaaaactctacttatctctttattac 21841762  T
Q  237 ttg 239  Q
    |||    
T  21841763 ttg 21841765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 12183331 - 12183428
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||   |||| || | ||||||  |||||| |||||||||||||| | ||||||| ||||||||||||||||||| |||  ||||||||    
T  12183331 aaaataagtaacgtgaattgttaggacgaaatgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacgatttggtacactt 12183428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 14079336 - 14079421
Alignment:
Q  41 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 126  Q
    |||||||| || |||||||||||||||||||||| ||||||||| ||| |||||| || || |||||| |||| |||  |||||||    
T  14079336 attcgaagaattctaaccgctgcttacttttctgtaaccaaaaataggaaaacttcctttgttgcaaacagataaaaattgcaact 14079421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 23645765 - 23645850
Alignment:
Q  160 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||| ||||   |||| |||| ||||||| ||||||  | ||||||||||| ||||||||| |||||||||||||||||||    
T  23645765 caaaaataattaacgataattgtttggacgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaac 23645850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 6630717 - 6630773
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||| ||||||||||||||| ||||| |||||||||||  ||||||||||||||||    
T  6630717 acgaaacgacaatctatgtggatccgatactctacttatta--ttattacttggtaaac 6630773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 21907511 - 21907448
Alignment:
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||| ||||||| ||||||  ||||||||||||| | ||||||| |||||||||||||||||||    
T  21907511 tttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaac 21907448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 9898978 - 9899056
Alignment:
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttatt-actttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||||||||   |||||||| ||| ||||||| |  |||||||||||||||||||||||  ||||||||    
T  9898978 tttgaacgaaacaacaatccccgtggatacaatactctacttttagactttattacttggtaaacaatttggtacactt 9899056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 17299832 - 17299914
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||| |||||| |||| || |||| ||||||    || |||||||| ||||||||| |||||||||||||||||||    
T  17299832 aaataagtaacgcaaattgtttggactaaacgacaatcccgatgaatacgatactctacttatcactttattacttggtaaac 17299914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 22813612 - 22813665
Alignment:
Q  54 taaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| || ||||||    
T  22813612 taaccgctacttacttttctgcaacc-aaaacaggtaaacttgctttgttgcaaa 22813665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 1635185 - 1635140
Alignment:
Q  38 gagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaa 83  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||||    
T  1635185 gagattcgaagaatcctaaccgctgtttacttttctacaaccaaaa 1635140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 4339851 - 4339737
Alignment:
Q  141 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 240  Q
    |||||||||||||||||    |||||||||||  | ||||  ||| || |||| ||||||  ||||||||| ||| ||||||||| ||||||||| |||     
T  4339851 ttttatatcgtcaaact----aaaataagtaatgcgaattggttggacaaaacgacaatcattgtggatacaatactctacttatcactttattatttga 4339756  T
Q  241 taaacaattcagtacactt 259  Q
    |||||||||  ||||||||    
T  4339755 taaacaatttggtacactt 4339737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 12183208 - 12183279
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||||||| |||||||||| |||||||||||||| |||| ||||||||| |||||||| || |||||| ||||    
T  12183208 gattcgaagaatcctaaccgttgcttacttttctgtaacc-aaaacaggt-aacttgctatgttgcaaacagat 12183279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 20005899 - 20005976
Alignment:
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||| ||||||| | |||| |||| ||||||||| ||| ||||| ||||||||||||||||||| |||  ||||||||    
T  20005899 tttggacgaaacgaaaatccatgtagatacgatactctgcttatcactttattacttggtaaacgatttggtacactt 20005976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 21932100 - 21932149
Alignment:
Q  210 acgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||| ||||||||| |||||||||||||||||||||||  ||||||||    
T  21932100 acgatactctacttatcactttattacttggtaaacaatttggtacactt 21932149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 22567919 - 22567842
Alignment:
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||| ||||||| |||||| |||||||||| ||| | ||||| | || ||||||||||||||||||||  ||||||||    
T  22567919 tttggacgaaaccacaatccatgtggatacaatactatacttttcacgttattacttggtaaacaatttggtacactt 22567842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 17883719 - 17883771
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 92  Q
    |||| |||| ||| ||| |||||||||||||||| ||||||||||||||||||    
T  17883719 gatttgaagaatcataaacgctgcttacttttctccaaccaaaaacaggtaaa 17883771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 9838472 - 9838380
Alignment:
Q  141 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 237  Q
    |||||||||||||||||    |||||||||||| | | || ||| ||| |||  |||||| |||||||||| ||| ||||||||| |||||||||||    
T  9838472 ttttatatcgtcaaact----aaaataagtaacgcgagttgtttcaacaaaatgacaatccatgtggatacaatactctacttatcactttattact 9838380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 19244664 - 19244601
Alignment:
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||| ||||||| ||||||| | | ||| ||||| ||||||||| |||||||||||||||||||    
T  19244664 tttggacgaaacgacaatctctatagattcgatactctacttatcactttattacttggtaaac 19244601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 7543005 - 7543047
Alignment:
Q  207 gatacgatattctacttattactttattacttggtaaacaatt 249  Q
    ||||||||| | ||||||| |||||||||||||||||||||||    
T  7543005 gatacgatactttacttatcactttattacttggtaaacaatt 7543047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 18075289 - 18075331
Alignment:
Q  41 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaa 83  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||    
T  18075289 attcaaagaatcttaaccgctgcttacttttctgcaaccaaaa 18075331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 22566203 - 22566249
Alignment:
Q  203 tgtggatacgatattctacttattactttattacttggtaaacaatt 249  Q
    |||||||| |||| ||||||||| |||||||||||||||||| ||||    
T  22566203 tgtggatatgatactctacttatcactttattacttggtaaataatt 22566249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 15466577 - 15466493
Alignment:
Q  53 ctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact 141  Q
    |||||||||| ||||||||||||||||  ||| |||| ||||||||||| |||||| |||| |||| ||||| | | ||||||||||||    
T  15466577 ctaaccgctgtttacttttctgcaacc--aaataggt-aacttgctctgttgcaaacagataaaatttgcaa-tctctaacccttaact 15466493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 22566049 - 22566090
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaa 91  Q
    |||||||||||||||||||||||| ||| |||||| ||||||    
T  22566049 atcctaaccgctgcttacttttctacaatcaaaaataggtaa 22566090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 8241335 - 8241279
Alignment:
Q  203 tgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||| ||||||||| ||||| |||||| |||||| |||  ||||||||    
T  8241335 tgtggatacgatactctacttatcactttcttacttcgtaaacgatttggtacactt 8241279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 22412940 - 22412999
Alignment:
Q  41 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctg 101  Q
    |||||||| |||||||||||| |||||||| ||| |||| |||||||||||| | ||||||    
T  22412940 attcgaagaatcctaaccgctacttactttcctgtaacc-aaaacaggtaaattcgctctg 22412999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 24252227 - 24252287
Alignment:
Q  160 caaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattcta 220  Q
    |||||||||||||||  |||| |||| || |||| |||||| |||||||||||||| ||||    
T  24252227 caaaaataagtaacaagaattgtttggactaaacgacaatccatgtggatacgatactcta 24252287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 684 - 904
Alignment:
Q  25 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 124  Q
    |||||||||||| | | ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| |||| |||  |||||    
T  684 aatataaacagagggggttcgaagaatcttaaccgcttcttacttttctgcaaccaaaaacaggtaaactttctctgttgcaaacagataaaaattgcaa 783  T
Q  125 -ctttat-aacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctact 222  Q
     |||| | |||||||| |||||||||||||||||||| |||||||||||||    ||| |||| ||||||| |||||||   ||||||||||| ||||||    
T  784 tctttctaaacccttatcttttatatcgtcaaacttataaaaataagtaacgtggattgtttggacgaaacgacaatctcaatggatacgatactctact 883  T
Q  223 tattactttattacttggtaa 243  Q
    ||| |||||||||||||||||    
T  884 tatcactttattacttggtaa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 25 - 173
Target Start/End: Original strand, 20744532 - 20744679
Alignment:
Q  25 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 124  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| || |||||| |||| |||  |||||    
T  20744532 aatataaacaggtgggattcgaagaatcctaaccgctgcttacttttctacaaccaaaa-caggtaaacttgctatgttgcaaacagataaaaattgcaa 20744630  T
Q  125 ctttataacccttaacttttatatcgtcaaacttacaaaaataagtaac 173  Q
    || | ||||||||||||||||||||||||||||||||||||||||||||    
T  20744631 ctctctaacccttaacttttatatcgtcaaacttacaaaaataagtaac 20744679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 17432125 - 17431885
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||| | |  |||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||| |||  |||     
T  17432125 tccaacaatataaacatagggtattcgaagaatcctaaccgctgcttacttttctgcaacc-aaaacaagtaaacttgctctgttgcaaacagaaaaaaa 17432027  T
Q  119 atgcaactttataacccttaacttttatatcgtc-aaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatatt 217  Q
     | ||||| | |||||||||  |||||||||| | ||||||| ||||||||||| |   | || |||| | ||||| ||||||| ||||||||||||| |    
T  17432026 ttacaactctttaacccttatattttatatcgccaaaacttataaaaataagtagcgtgagttgtttggatgaaacgacaatctctgtggatacgatact 17431927  T
Q  218 ctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||   ||||||||||||||||||| ||| |||||||||    
T  17431926 ctactttccactttattacttggtaaacgatttagtacactt 17431885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 82 - 259
Target Start/End: Original strand, 19004146 - 19004323
Alignment:
Q  82 aaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaatta 181  Q
    |||||| ||||||||| ||| |||||| |||| |||  ||||||| | ||||||||| ||||||||||||||||||||||||||||||||||   ||||     
T  19004146 aaacagataaacttgccctgttgcaaacagataaaaattgcaactatttaacccttatcttttatatcgtcaaacttacaaaaataagtaacgtgaattg 19004245  T
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||| || |||  |||||| |||||||||||||| || |||||| ||||||||||||||||||| ||| |||||||||    
T  19004246 tttggacaaaatgacaatccatgtggatacgatactccacttatcactttattacttggtaaacgatttagtacactt 19004323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 40 - 241
Target Start/End: Complemental strand, 34128857 - 34128656
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 137  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||| |  | |||  | |||  |||| ||||||||    
T  34128857 gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaa-caggtaaacttgctctattgcaaacaagtcaaaatttcaagtctttttaaccctt 34128759  T
Q  138 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 237  Q
    |||||||||| | |||| |||| ||||||||| |||   |||| |||| ||||||  |||||   ||||||||||||||||||||||| |||||||||||    
T  34128758 aacttttataccttcaa-cttataaaaataagaaacgagaattttttggacgaaaggacaattcctgtggatacgatattctacttatcactttattact 34128660  T
Q  238 tggt 241  Q
    ||||    
T  34128659 tggt 34128656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 245
Target Start/End: Complemental strand, 39434676 - 39434478
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 137  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||| |||||||||||||        ||| |||| |||  |||||  |||| ||||||||    
T  39434676 gattcgaagaatcctaaccgttgcttacttttctgcaaacaaaa-caggtaaacttgc--------aaacagataaaaattgcaattctttttaaccctt 39434586  T
Q  138 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 237  Q
    |||||||||||||||||  | | ||||||||||||| | |||| |||| || |||  |||||| ||||||||||||| |||||||||| | |||||||||    
T  39434585 aacttttatatcgtcaagttaataaaaataagtaacgcgaattgtttggacaaaaggacaatccatgtggatacgattttctacttatcaatttattact 39434486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 20563957 - 20564158
Alignment:
Q  28 ataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactt 127  Q
    ||||||||| | ||||||||| |||||||| ||| |||||||||||||||||||||||| ||||| |||||||| |||||| |||| |||  ||||||      
T  20563957 ataaacagaggtgattcgaagaatcctaactgcttcttacttttctgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattgcaac-- 20564054  T
Q  128 tataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-tt 226  Q
             | ||||||||| |||||||||||||||||||||||||   ||   |||| |||||| ||||||| |||||||||||||| |||||||| |     
T  20564055 ---------tcacttttataccgtcaaacttacaaaaataagtaactagaagcgtttggacgaaagaacaatccatgtggatacgatactctacttacta 20564145  T
Q  227 actttattacttg 239  Q
    |||||||||||||    
T  20564146 actttattacttg 20564158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 249
Target Start/End: Original strand, 23388813 - 23388925
Alignment:
Q  137 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    ||||||||| | ||||||||||||||||||||||||||  |||| || | ||||||  |||||| |||||||||||||| ||||||||| ||||||||||    
T  23388813 taacttttacaccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattac 23388912  T
Q  237 ttggtaaacaatt 249  Q
    ||||| |||||||    
T  23388913 ttggttaacaatt 23388925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 243
Target Start/End: Original strand, 24245401 - 24245625
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||  | ||||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||| || || ||| | || |||     
T  24245401 tccaacaatataaacagggg-gattcgaagaatcctaaccgttgcttacttttctgcaactaaaa-caggtaaacttgctttgttggaaacaaataaaaa 24245498  T
Q  119 atgcaac-tttataaccctt--aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgata 215  Q
      | ||| ||| ||||||||  | |||||||||  |||| |||||||||||||||||| | | || |||| ||||||| ||||||  |||||||||||||    
T  24245499 tcgaaacctttctaacccttttatcttttatattctcaa-cttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccttgtggatacgata 24245597  T
Q  216 ttctacttattactttattacttggtaa 243  Q
     ||||||||| |||||||||| ||||||    
T  24245598 ctctacttatcactttattacatggtaa 24245625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 245
Target Start/End: Original strand, 20315307 - 20315513
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttat--aaccctt 137  Q
    ||||||||| | ||||| |||| |||||| || ||||||||||| || ||||||||||| || |||||| |||| |||  ||||| ||| |  | |||||    
T  20315307 gattcgaagaaccctaatcgcttcttactattttgcaaccaaaa-catgtaaacttgctttgttgcaaacagataaaaattgcaagtttctttatccctt 20315405  T
Q  138 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 237  Q
    || ||||||||||||||  | | |||||||||| || | |||| |||| ||||||  | |||| |||||||||||||| ||||||||| || ||||||||    
T  20315406 aaattttatatcgtcaacttaataaaaataagttacgcgaattgtttggacgaaaggataatccatgtggatacgatactctacttatcacattattact 20315505  T
Q  238 tggtaaac 245  Q
    ||||||||    
T  20315506 tggtaaac 20315513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 259
Target Start/End: Complemental strand, 19051679 - 19051551
Alignment:
Q  130 taacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattact 229  Q
    ||||||||||||||||| || ||||||||||||||||||||||||  |||| |||  | | ||||||||||  || |||||||| | || |||||| |||    
T  19051679 taacccttaacttttatgtcatcaaacttacaaaaataagtaacaagaattgtttagatggaacaacaatccctg-ggatacgacactcaacttatcact 19051581  T
Q  230 ttattacttggtaaacaattcagtacactt 259  Q
    ||||||||| |||||| |||  ||||||||    
T  19051580 ttattactttgtaaacgatttggtacactt 19051551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 34487736 - 34487640
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||| | |||| |||  ||||||| |||||| ||||||||| |||||||||||||  |||||||||||||||||||||||  ||||||||    
T  34487736 aaaataagtaacgcgaattgtttagacgaaacgacaatccatgtggatatgatattctactta-cactttattacttggtaaacaatttggtacactt 34487640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 15375772 - 15375979
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||||||||| | ||||||||| |||||||||||| |||  ||||||||||| |||||| | || |||  |||||   | |||           
T  15375772 gattcgaagaatcctaaccgttacttacttttatgcaaccaaaaataggcgaacttgctctgttgcaaacaaataaaaattgcaa---tctaa------- 15375861  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
     ||||||| |||||| ||| |||||||||||||  |||||| |||| ||||||| ||||||  |||||||| |||| ||||||||| | ||||||| |||    
T  15375862 -ttttataccgtcaa-cttgcaaaaataagtaatgcaaattttttggacgaaacgacaatccctgtggataggatactctacttatcattttattatttg 15375959  T
Q  240 gtaaacaattcagtacactt 259  Q
    |||||| |||  ||||||||    
T  15375960 gtaaacgatttggtacactt 15375979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 20858807 - 20858707
Alignment:
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    ||||||||| ||||||||||||||||||||||||||  |||| || | || |||  |||||||  |||||||||||| ||||||||| | ||||||||||    
T  20858807 acttttataccgtcaaacttacaaaaataagtaacaagaattgttcggacaaaaggacaatctccgtggatacgatactctacttatcattttattactt 20858708  T
Q  239 g 239  Q
    |    
T  20858707 g 20858707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 245
Target Start/End: Original strand, 25550487 - 25550587
Alignment:
Q  143 ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggta 242  Q
    |||||||||||| ||||||||| |||||||||  |||| |||| ||||||  ||||||  |||||||| |||| ||||||||| ||||||||||||||||    
T  25550487 ttatatcgtcaa-cttacaaaa-taagtaacaagaattgtttggacgaaatgacaatccctgtggatatgatactctacttatcactttattacttggta 25550584  T
Q  243 aac 245  Q
    |||    
T  25550585 aac 25550587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 16523680 - 16523766
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 126  Q
    ||||| ||| ||||||||||||||||||||||||  ||| ||||||||||||| | |||||| |||||| |||| |||  |||||||    
T  16523680 gattcaaagaatcctaaccgctgcttacttttctataacaaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaact 16523766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 20549597 - 20549647
Alignment:
Q  42 ttcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 92  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  20549597 ttcgaagaatcctaaccgctgcttacttgcctgcaaccaaaaacaggtaaa 20549647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 18208249 - 18208345
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||  |||| |||| ||||||  |||||| |||||||||||||| ||||||||  |||||||||||| |||||| |||  ||||||||    
T  18208249 aaaataagtaacatgaattgtttggacgaaaggacaatccatgtggatacgatactctactta-cactttattactttgtaaacgatttggtacactt 18208345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 24140657 - 24140597
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctg 101  Q
    |||| |||| |||||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  24140657 gatttgaagaatcctaaccgttgcttacttttctgcaacc-aaaataggtaaacttgctctg 24140597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 26835885 - 26835799
Alignment:
Q  25 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    |||||| ||| ||| ||||||||| |||||||| ||||| ||||||||||||||  |||||||||||| | |||||| |||||| ||||    
T  26835885 aatatacacatatgggattcgaagaatcctaactgctgcatacttttctgcaac--aaaacaggtaaattcgctctgttgcaaacagat 26835799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 17315090 - 17315182
Alignment:
Q  152 caaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||||||||||||||||||   |||| || | | ||||  |||||| |||||||||||||| | ||||||| ||||||||||||| ||||    
T  17315090 caaacttacaaaaataagtaactagaattgttcggaagaaaggacaatccatgtggatacgatactttacttatcactttattacttgataaa 17315182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 24852173 - 24852253
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 243  Q
    |||||||||||   |||| |||  |||||||||||||| |||||||||||||| | ||||||| | |||||||||||||||    
T  24852173 aaataagtaacgtgaattgtttagacgaaacaacaatccatgtggatacgatactatacttatcattttattacttggtaa 24852253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 261
Target Start/End: Original strand, 17171578 - 17171652
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 261  Q
    ||||||| |||||| |||||||||||||  ||||||||| ||||||||||||| ||||  |||  ||||||||||    
T  17171578 acgaaacgacaatccatgtggatacgatgctctacttatcactttattacttgataaaagatttggtacacttac 17171652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 19086207 - 19086277
Alignment:
Q  190 aaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactta 260  Q
    ||||||||||  |||||||||  ||| ||||||||| ||||||||||||||||||| |||  |||||||||    
T  19086207 aaacaacaattcatgtggatataatactctacttatcactttattacttggtaaacgatttggtacactta 19086277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 24167586 - 24167683
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 261  Q
    |||||||||| ||| ||| |||| | ||||| |||||| ||||  ||| |||| |||||||| |||||||||||||||||||| ||| | |||||||||    
T  24167586 aaataagtaa-acagattgtttggaagaaacgacaatccatgtatatatgatactctacttactactttattacttggtaaacgatttaatacacttac 24167683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 24266955 - 24267051
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||| |||| |||| || |||  | ||||  ||||||||||||| ||||||||  ||||||||||||||||||| |||  ||||||||    
T  24266955 aaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacactt 24267051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 24343586 - 24343682
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||| |||| |||| || |||  | ||||  ||||||||||||| ||||||||  ||||||||||||||||||| |||  ||||||||    
T  24343586 aaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacactt 24343682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 25402337 - 25402434
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||| | ||| ||| | ||||||| ||||||  ||||||||| ||| ||||||||| ||||  |||||||| ||||||||  ||||||||    
T  25402337 aaaataagtaacgcgaatcattaggacgaaacgacaatccctgtggatacaatactctacttatcacttccttacttggcaaacaatttggtacactt 25402434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 28664983 - 28664911
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||||||| ||| |||||| |||||| |||||||||||| |||||||||||| | |||||| |||||| ||||    
T  28664983 gattcgaagaatcttaaccgttgcttatttttctgcaacc-aaaacaggtaaattcgctctgttgcaaacagat 28664911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 15470010 - 15469938
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||| |||||  |||||||||||||| || || ||| ||||||||||||||||||| |||  ||||||||    
T  15470010 acgaaacgacaattcatgtggatacgatactcgacctatcactttattacttggtaaacgatttggtacactt 15469938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 245
Target Start/End: Complemental strand, 24140542 - 24140458
Alignment:
Q  161 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||| ||||| | |||| |||| ||||||  ||||||   |||||||| ||| ||||||||| |||||||||||||||||||    
T  24140542 aaaaatatgtaacgcgaattgtttggacgaaaggacaatcccagtggatacaatactctacttatcactttattacttggtaaac 24140458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 22755577 - 22755523
Alignment:
Q  205 tggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||| |||||||||  ||| |||||||||||||| |||| ||||||||    
T  22755577 tggatacgatactctacttatctcttcattacttggtaaacgattcggtacactt 22755523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 17635378 - 17635325
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgata 215  Q
    |||||||||||||| |||| |||| ||||| ||||||| |||||||||| ||||    
T  17635378 aaaataagtaacacgaattgtttggacgaaccaacaatttatgtggatatgata 17635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 20858894 - 20858827
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    ||||||| | |||||||||||||||||||||| ||||||| |||| ||||||| | ||| || ||||||    
T  20858894 gattcgacgaatcctaaccgctgcttacttttatgcaacc-aaaataggtaaattcgctttgttgcaaa 20858827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 23380290 - 23380354
Alignment:
Q  195 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||| || || |||||||| | ||||||| | |||||||||||||||||||||  ||||||||    
T  23380290 acaatccatatgaatacgatagtttacttatcagtttattacttggtaaacaatttggtacactt 23380354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 8e-43; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 17438293 - 17438512
Alignment:
Q  25 aatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa 124  Q
    |||||||| ||| | ||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||| |||| |||  |||||    
T  17438293 aatataaatagaggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaa-caggtaaaattgctctgttgcaaacagataaaaattgcaa 17438391  T
Q  125 -ctttataacccttaactt-ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctact 222  Q
     |||| ||| |||| | || |||||||||||||||||||||||||||||||   |||| |||| ||||||| |||||| ||||||||| |||| ||||||    
T  17438392 gctttctaaacctttatttattatatcgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatatgatactctact 17438491  T
Q  223 tattactttattacttggtaa 243  Q
    ||| | ||||| |||||||||    
T  17438492 tatcattttataacttggtaa 17438512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 259
Target Start/End: Complemental strand, 21302141 - 21301920
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| ||||||||||||| ||| |||||||||| |||||| |||||||||||||||| |||||| |||| |||  | ||||  | |||||| ||     
T  21302141 gattcgaagaatcctaaccgctgtttatttttctgcaatcaaaaaaaggtaaacttgctctgttgcaaacagataaaaattccaacactctaacccatat 21302042  T
Q  140 cttttat---atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    |||||||   ||||||||  ||||||||||||||||| | |||| |||| ||||||  |||||| |||||||||||||| ||||||||| ||||||||||    
T  21302041 cttttattatatcgtcaat-ttacaaaaataagtaactcgaattgtttggacgaaatgacaatccatgtggatacgatactctacttatcactttattac 21301943  T
Q  237 ttggtaaacaattcagtacactt 259  Q
    ||||||||| |||  ||||||||    
T  21301942 ttggtaaacgatttggtacactt 21301920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 19925504 - 19925701
Alignment:
Q  45 gaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact---ttataacccttaact 141  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| | || |||| ||||| |   || |||||||||| |    
T  19925504 gaagaatcctaaccgctgcttacttttctgcaaaccaaaacaggtaaacttgctctgttgcaaacatataaaat-tgcaagtctcttttaacccttaaat 19925602  T
Q  142 tttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttgg 240  Q
    |||||||||| ||  | | ||||||||||||| | ||||||||| ||||||  |||||| |||||||||||||| ||||| ||| || |||||||||||    
T  19925603 tttatatcgttaacttaataaaaataagtaacgcgaattatttggacgaaaagacaatccatgtggatacgatactctacatatcaccttattacttgg 19925701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 243
Target Start/End: Complemental strand, 12411390 - 12411169
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaat 118  Q
    ||||| |||||||||||  | ||||||||| ||||||||||   |||||| |||||||||||||  |||||||||||| | || |||||| | |  |||     
T  12411390 tccaacaatataaacaggggggattcgaagaatcctaaccgtcacttactgttctgcaaccaaa--caggtaaacttgttgtgttgcaaacata--aaaa 12411295  T
Q  119 atgcaactttataa-cccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatatt 217  Q
     ||||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||||  ||||| |||| ||||||| ||||||  ||||||||||||| |    
T  12411294 ttgcaaatttctaaacccttaacttttatatcatcaaacttagaaaaataagtaacctaaattgtttgtacgaaacgacaatccttgtggatacgatact 12411195  T
Q  218 ctacttattactttattacttggtaa 243  Q
    ||||| || |||||||||||||||||    
T  12411194 ctactaatcactttattacttggtaa 12411169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 27 - 259
Target Start/End: Complemental strand, 19908542 - 19908309
Alignment:
Q  27 tataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 126  Q
    |||||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| || |||||| | || |||  | |||      
T  19908542 tataaacatatgggattcgaagaatcctaactgctgcttacttttctgcaaccaaaaataggtaaacttgctttgttgcaaaaaaataaaaattccaatc 19908443  T
Q  127 ttataacccttaacttttatatcgtcaaact-tacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttat 225  Q
    || ||||||||||||||||||||||||||||  | ||||||| || ||   |||| |||| ||||||| || | |  ||||||||||||| | |||||||    
T  19908442 ttttaacccttaacttttatatcgtcaaactgaaaaaaaataggttacgtgaattgtttggacgaaacgacgacccttgtggatacgatactatacttat 19908343  T
Q  226 tactttattacttggtaaacaattcagtacactt 259  Q
     | ||||||| ||||||||| |||  ||||||||    
T  19908342 cattttattatttggtaaacgatttggtacactt 19908309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 245
Target Start/End: Complemental strand, 932963 - 932758
Alignment:
Q  41 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctta 138  Q
    |||||||| || ||||||||||||||||||||||||||||||| || |||||||||||||| |||||| | || |||  || ||  ||||  |||| |||    
T  932963 attcgaagaatactaaccgctgcttacttttctgcaaccaaaa-caagtaaacttgctctgttgcaaacaaataaaaattgtaagtcttttaaaccttta 932865  T
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    ||||||||| ||||||||||| ||||||||||||    |||| |||| ||||||  ||||||| ||||||||||||| |||| |||| | ||||||||||    
T  932864 acttttataacgtcaaacttataaaaataagtaatgtgaattttttggacgaaaggacaatctctgtggatacgatactctatttatcaatttattactt 932765  T
Q  239 ggtaaac 245  Q
     ||||||    
T  932764 agtaaac 932758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 40 - 245
Target Start/End: Original strand, 16245607 - 16245812
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    |||||| || || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||  ||||| | | ||||||||||    
T  16245607 gattcggagaattctaaccgctgcttacttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaaatctctaacccttaa 16245705  T
Q  140 --ctttta---tatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 234  Q
      ||||||   ||| ||||||||    ||||||||||||   |||| |||| ||||||  | |||| ||||||||| |||| ||||||||| ||||||||    
T  16245706 ctcttttattttattgtcaaact----aaaataagtaacgagaattgtttggacgaaatgataatccatgtggatatgatactctacttatcactttatt 16245801  T
Q  235 acttggtaaac 245  Q
    |||||||||||    
T  16245802 acttggtaaac 16245812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 244
Target Start/End: Complemental strand, 4650447 - 4650248
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa--ctttataaccctt 137  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||| |||| |||  |||||  |||| ||||||||    
T  4650447 gattcgaagaatcctaaccgttgcttacttttctgcaacc-aaaacaggtaaacttgctccgttgcaaacagataaaaattgcaagtctttttaaccctt 4650349  T
Q  138 aacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattact 237  Q
    ||||||| ||||||| |||||     |||||||||| | |||| ||||  |||||  ||||||  ||||||||||||| | |||| || |||||||||||    
T  4650348 aacttttgtatcgtc-aactt-----aataagtaacgcgaattgtttgggcgaaaggacaatccctgtggatacgatactttactcatcactttattact 4650255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 239
Target Start/End: Original strand, 16229831 - 16230019
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| |||| |||  ||||||||           |    
T  16229831 gattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaactt-----------a 16229919  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    |||||||| | |||||||||||||||||||||||   |||| |  | || |||  ||||||  ||||||||||||| |||||||| ||||||||||||||    
T  16229920 cttttataccatcaaacttacaaaaataagtaactagaattgtaaggacaaaaggacaatccctgtggatacgatactctacttactactttattacttg 16230019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 241
Target Start/End: Complemental strand, 8770243 - 8770039
Alignment:
Q  26 atataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaac 125  Q
    ||||| ||||| | ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| | || |||  |||||     
T  8770243 atatatacagaggggattcgaagaatcctaactgctgcttacttttctgcaacc-aaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa- 8770146  T
Q  126 tttataacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttat 225  Q
             | |||||||||||  ||||||||||||||| |||||||||  |||| ||   || |||  |||||| ||||||||| |||| | |||||||    
T  8770145 ---------cctaacttttatactgtcaaacttacaaaactaagtaacaagaattgttcagacaaaaggacaatccatgtggatatgatactttacttat 8770055  T
Q  226 tactttattacttggt 241  Q
     |||||||||||||||    
T  8770054 cactttattacttggt 8770039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 21325439 - 21325342
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||||||||| |||| ||||||| ||||| | ||||||||||||| | ||||||| | |||||||||||||||||||||  ||||||||    
T  21325439 aaaataagtaacacaaattgtttggacgaaacgacaatttttgtggatacgatactatacttatcagtttattacttggtaaacaatttggtacactt 21325342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 12754800 - 12754868
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaa 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  12754800 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaccaggtaaactagctctgttgcaaa 12754868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 239
Target Start/End: Complemental strand, 8170093 - 8169907
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||| | ||| || |||||| |||| |||  | |||||            |    
T  8170093 gattcgaagaatcctaaccgctgcatacttttctgcaaccaaaaacaggtaaattcgctatgttgcaaacagataaaaattacaact------------a 8170006  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    |||||||| |  | ||||||||||||||||||||   |||| || | |||||| || ||||| ||||||||||||||| |||||| ||||||||||||||    
T  8170005 cttttataccaac-aacttacaaaaataagtaactagaattgttcggacgaaagaaaaatctctgtggatacgatattttacttactactttattacttg 8169907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 241
Target Start/End: Complemental strand, 8765327 - 8765137
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| | || |||  |||||          | |||    
T  8765327 gattcgaagaatcttaactgctgcttacttttctgcaacc-aaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa----------cctaa 8765239  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    ||||||||  ||||||||||||||| |||||||||  |||| ||   || |||  |||||| |||||||||||||| | ||||||| ||||||||| |||    
T  8765238 cttttatactgtcaaacttacaaaactaagtaacaagaattgttcagacaaaaggacaatccatgtggatacgatactttacttatcactttattaattg 8765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 259
Target Start/End: Original strand, 19171810 - 19171931
Alignment:
Q  137 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    |||||||||||||||||| || ||||||||||||||  |||||| |||| ||||||| ||||||  |||| ||| |||  ||| ||||| ||||||||||    
T  19171810 taacttttatatcgtcaacct-acaaaaataagtaatgcaaattgtttggacgaaacgacaatccttgtgaatatgatcctctgcttatcactttattac 19171908  T
Q  237 ttggtaaacaattcagtacactt 259  Q
    ||||||||||||| |||| ||||    
T  19171909 ttggtaaacaatttagtatactt 19171931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 259
Target Start/End: Complemental strand, 22349532 - 22349411
Alignment:
Q  137 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    |||||||||||  ||||| |||||||||||||||||    |||| |||| ||||||| ||||| ||||||||||||||| ||||||||| |||||||||     
T  22349532 taacttttatactgtcaa-cttacaaaaataagtaatgtgaattgtttggacgaaacgacaatttatgtggatacgatactctacttatcactttattat 22349434  T
Q  237 ttggtaaacaattcagtacactt 259  Q
    ||||||||| |||  ||||||||    
T  22349433 ttggtaaacgatttggtacactt 22349411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 27413766 - 27413835
Alignment:
Q  32 acagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctg 101  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  27413766 acagacgagatacgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaaatcgctctg 27413835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 257
Target Start/End: Complemental strand, 20429920 - 20429714
Alignment:
Q  52 cctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa-cttttat---a 147  Q
    ||||||| ||| ||||||||||||||||||||  || ||||||||||||| |||||| | || |||  |||||  || |||||||||  |||||||   |    
T  20429920 cctaaccactgattacttttctgcaaccaaaat-agataaacttgctctgttgcaaacatataaaaattgcaaacttctaacccttactcttttattata 20429822  T
Q  148 tcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaa 247  Q
    ||||||||||||  |||||||||||| | |||| | || | ||||  ||||||  | | ||||||||| ||||||||| | |||||||||||||||||||    
T  20429821 tcgtcaaactta--aaaataagtaacgcgaattgtgtggatgaaatgacaatccttatagatacgatactctacttatcattttattacttggtaaacaa 20429724  T
Q  248 ttcagtacac 257  Q
    || |||||||    
T  20429723 tttagtacac 20429714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 8889130 - 8889229
Alignment:
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttg 239  Q
    |||||||| |||||||||||||||||||||||||   |||| || ||||||||  ||||||  ||||||||| ||| ||||||||| |||||||||||||    
T  8889130 cttttataccgtcaaacttacaaaaataagtaacgagaattgttcgaacgaaaggacaatccctgtggatacaatactctacttatcactttattacttg 8889229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 12805890 - 12805972
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    |||||||||||| |||||| |||| | ||||| |||||| ||||||||| |||| ||||||||| ||||||||||||||||||    
T  12805890 aaaataagtaacgcaaattgtttggatgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaa 12805972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 245
Target Start/End: Original strand, 21303242 - 21303437
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaact-------t 142  Q
    |||||||||||||||||||||||||||||||||| || |||| ||||||||| |||||| |||| |||  ||||| | | |||||||| |||       |    
T  21303242 atcctaaccgctgcttacttttctgcaaccaaaa-caagtaa-cttgctctgttgcaaacagataaaaattgcaa-tctctaaccctttactcttttatt 21303338  T
Q  143 ttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggta 242  Q
    |||||| ||||| ||||   |||||||||||  ||||| |||| | ||||||||||||| ||||| ||||||| ||||||||| | ||||||| ||||||    
T  21303339 ttatatagtcaa-ctta---aaataagtaacggaaattgtttggatgaaacaacaatctttgtggctacgatactctacttatcattttattatttggta 21303434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 8557130 - 8557211
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||||||||| |||||| ||| || ||||| |||||| |||||||||||||| ||||||||| ||||||||||| ||||||    
T  8557130 aaataagtaacgcaaattgtttaaatgaaacgacaatccatgtggatacgatactctacttatcactttattactcggtaaa 8557211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 10917992 - 10917920
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||||| |||  ||||||||    
T  10917992 acgaaacaacaatccatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacactt 10917920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 821515 - 821597
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||||  |||| |||  ||||||| | |||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  821515 aaataagtaacatgaattgtttacacgaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaaac 821597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 18458456 - 18458521
Alignment:
Q  194 aacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||  ||||||||    
T  18458456 aacaatctttgtggatacgatactctacttatcactttattacttgataaacaatttggtacactt 18458521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 12759445 - 12759389
Alignment:
Q  203 tgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||    
T  12759445 tgtggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 12759389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 19909850 - 19909902
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 92  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  19909850 gattcaaagaatcctaaccgctgcttacttttctgcaacaaaaaacaggtaaa 19909902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 8319138 - 8319055
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||||||||||||  |||| |||| ||||||| | ||||  ||||||||| ||||||||||||| |||| ||||||||||||||    
T  8319138 aaaataagtaacatgaattgtttgtacgaaacgataatccctgtggatactatattctacttatcacttcattacttggtaaac 8319055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 28729016 - 28728961
Alignment:
Q  189 gaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  28729016 gaaacgacaatctatgtggatacgatactctacttatcactttattacttgataaa 28728961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 2167632 - 2167698
Alignment:
Q  177 aattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 243  Q
    |||| |||| ||||||| ||| | ||||||||||||||| ||||||||| |||||||||||||||||    
T  2167632 aattgtttggacgaaacgacattttatgtggatacgatactctacttatcactttattacttggtaa 2167698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 7494971 - 7495045
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaac 93  Q
    ||||| |||||||| ||| | ||||||||  ||||||| | |||||||||||||| |||||||||||||||||||    
T  7494971 tccaacaatataaatagaggggattcgaataatcctaatccctgcttacttttctacaaccaaaaacaggtaaac 7495045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 21825870 - 21825967
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 261  Q
    ||||||||||| | || | |||| ||||||||| |||| |||||||||||||| ||||||||  ||||||||||| ||||||| |||  ||||||||||    
T  21825870 aaataagtaacgcgaactgtttggacgaaacaaaaatccatgtggatacgatactctactta-cactttattactcggtaaacgatttggtacacttac 21825967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 3116419 - 3116515
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||   |||| |||| ||||||| ||||||  ||||||||| ||| || |||||| |||||||||||||||||||||||  ||||||||    
T  3116419 aaaataagtaacgtgaattgtttggacgaaacgacaatccctgtggatactatactc-acttatcactttattacttggtaaacaatttggtacactt 3116515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 259
Target Start/End: Complemental strand, 41508588 - 41508369
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||| ||| ||| ||||||||| |||||||||||||||||||| || |||| |||||| || |||||| ||||  ||  ||||| | | ||||||||||    
T  41508588 gattcaaagaatcttaaccgctggttacttttctgcaaccaaaa-catgtaa-cttgctttgttgcaaacagatacaaattgcaaatctctaacccttaa 41508491  T
Q  140 ct--tttat---atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttatt 234  Q
    ||  |||||   ||||||||| |   ||||||||||||  |||||| |||| || |||| ||||||   |  ||||||||||||||| ||| ||||||||    
T  41508490 ctcttttattttatcgtcaaatt---aaaaataagtaatgcaaattgtttggactaaacgacaatccccgcagatacgatattctacctatcactttatt 41508394  T
Q  235 acttggtaaacaattcagtacactt 259  Q
    ||||| ||||| |||  ||||||||    
T  41508393 acttgataaacgatttggtacactt 41508369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 8883000 - 8883087
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactt 127  Q
    ||||||||| |||||||| || ||||| ||||||||||| ||||| ||||||||| ||| || |||||| |||| |||  ||||||||    
T  8883000 gattcgaagaatcctaactgcagcttaattttctgcaactaaaaataggtaaactcgctatgttgcaaacagataaaaattgcaactt 8883087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 19171744 - 19171799
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaactt 95  Q
    ||||||||| ||||||||| |||| |||||||||||||| |||||||| |||||||    
T  19171744 gattcgaagaatcctaaccactgcatacttttctgcaacaaaaaacagataaactt 19171799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 12805768 - 12805810
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaa 82  Q
    ||||||||| ||||||||| |||||||||||||||||||||||    
T  12805768 gattcgaagaatcctaacccctgcttacttttctgcaaccaaa 12805810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 19576108 - 19576150
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 92  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  19576108 atcctaaccgctgcttgcttttctgcaaccaaaaataggtaaa 19576150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 31286017 - 31286096
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    |||||||||||  ||||| |||| |||||||| |||||  |||||||||||||||||| |||  ||||||||||||||||||    
T  31286017 aaataagtaacggaaattgtttggacgaaaca-caatccctgtggatacgatattctagtta-cactttattacttggtaaa 31286096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 6289967 - 6289919
Alignment:
Q  197 aatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||| ||||||||| |||| ||||||||| |||||||||||||||||||    
T  6289967 aatccatgtggatatgatactctacttatcactttattacttggtaaac 6289919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 18736717 - 18736768
Alignment:
Q  207 gatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||||||||| ||||||||||||||||||| |||  ||||||||    
T  18736717 gatacgatattctacttat-actttattacttggtaaacgatttggtacactt 18736768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 19909937 - 19910020
Alignment:
Q  139 acttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctact 222  Q
    |||||||||  ||||||||||||||||||||||||   |||| || ||| ||||  ||||||  ||||||||||||| ||||||    
T  19909937 acttttatacggtcaaacttacaaaaataagtaactagaattgttcgaaagaaaggacaatccctgtggatacgatactctact 19910020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 7478211 - 7478285
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaac 93  Q
    ||||| |||||||| ||| | ||||||||  ||||||| | |||||||| ||||| |||| ||||||||||||||    
T  7478211 tccaacaatataaatagaggggattcgaataatcctaatccctgcttacatttctacaactaaaaacaggtaaac 7478285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 10744976 - 10744918
Alignment:
Q  187 acgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||| ||||||  | |||| |||||| ||||||||| |||||||||||||||||||    
T  10744976 acgaaacgacaatccctatggaaacgatactctacttatcactttattacttggtaaac 10744918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 27542944 - 27542997
Alignment:
Q  191 aacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    |||||||||  |||||||||||||| |||||||| ||||||||| ||||||||||    
T  27542944 aacaacaattcatgtggatacgatactctactta-tactttatttcttggtaaac 27542997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 18736560 - 18736593
Alignment:
Q  50 atcctaaccgctgcttacttttctgcaaccaaaa 83  Q
    ||||||||||||||||| ||||||||||||||||    
T  18736560 atcctaaccgctgcttatttttctgcaaccaaaa 18736593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 20023430 - 20023502
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||| ||| |||||||| ||| ||||||||||||||||| ||||| |||||| | |||||| |||||| ||||    
T  20023430 gattcaaagaatcctaactgctacttacttttctgcaacc-aaaactggtaaattcgctctgttgcaaacagat 20023502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 21325558 - 21325487
Alignment:
Q  44 cgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaa 117  Q
    ||||| ||| |||||||| ||||||||||||||||| |||  |||| ||||||||||| ||||||||||| |||    
T  21325558 cgaagaatcataaccgctacttacttttctgcaacc-aaattaggt-aacttgctctgttgcaaatagataaaa 21325487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 10745101 - 10745051
Alignment:
Q  61 tgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||||| ||||||||||||||| ||||||| ||||||||| |||||||||||    
T  10745101 tgcttacatttctgcaaccaaaa-caggtaa-cttgctctgttgcaaatagat 10745051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 11518002 - 11518038
Alignment:
Q  203 tgtggatacgatattctacttattactttattacttg 239  Q
    |||||||| |||||||||||||| |||||||||||||    
T  11518002 tgtggatatgatattctacttatcactttattacttg 11518038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 45 - 244
Target Start/End: Complemental strand, 70129 - 69930
Alignment:
Q  45 gaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaa-ctttataacccttaacttt 143  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||  |||||| | || |||  ||||| |||| ||||| ||| ||||    
T  70129 gaagaatcctaactgctgcttacttttctacaaccaaaaacaggtaaacttgctctattgcaaacaaataaaaattgcaacctttctaacctttatcttt 70030  T
Q  144 tatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 243  Q
    |||||| || ||| ||||||||||||||||   |||| |||| ||||||| ||||||  |||| |||||||| | ||||| | |||||||||||||||||    
T  70029 tatatcatc-aacatacaaaaataagtaacgagaattgtttggacgaaacgacaatccttgtgtatacgatactttacttgtcactttattacttggtaa 69931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 40 - 244
Target Start/End: Original strand, 35871 - 36077
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccctt-a 138  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| ||| || || | ||||||||| |||  ||||| | | |||||||| |    
T  35871 gattctaagaatcctaaccgctgcttacttttctgcaaccaaaatcaggtaa-ctttctttgttccaaatagataaaaattgcaaatctctaacccttta 35969  T
Q  139 acttttatat-----cgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttat 233  Q
    ||| ||||||     |||||||||||   ||||||||||||| ||||||||| | ||||| |||||  |||||||||||||| ||||||||| |||||||    
T  35970 actcttatattttatcgtcaaactta---aaataagtaacacgaattatttggatgaaacgacaattcatgtggatacgatactctacttatcactttat 36066  T
Q  234 tacttggtaaa 244  Q
    ||||| |||||    
T  36067 tacttagtaaa 36077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 249
Target Start/End: Complemental strand, 3655 - 3543
Alignment:
Q  137 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    ||||||||| | ||||||||||||||||||||||||||  |||| || | ||||||  |||||| |||||||||||||| ||||||||| ||||||||||    
T  3655 taacttttacaccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattac 3556  T
Q  237 ttggtaaacaatt 249  Q
    ||||| |||||||    
T  3555 ttggttaacaatt 3543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 12175 - 12111
Alignment:
Q  195 acaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||| || || |||||||| | ||||||| | |||||||||||||||||||||  ||||||||    
T  12175 acaatccatatgaatacgatagtttacttatcagtttattacttggtaaacaatttggtacactt 12111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 191
Target Start/End: Complemental strand, 25196 - 25056
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    |||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||  |||||          |||||    
T  25196 gatttgaagaatcctaaccgttgcttacttttctgcaacc-aaaacaggtaaacttgctctgttgcaaatagagaaaaattgcaa----------cttaa 25108  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaa 191  Q
    |||||||| ||||||||||||||||||||||||||  |||| |||| |||||    
T  25107 cttttataccgtcaaacttacaaaaataagtaacaataattgtttggacgaa 25056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 238
Target Start/End: Complemental strand, 21486 - 21299
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| ||||||| |||| |||||||||||| |||||||| ||||||||||| ||||| |||||| | || |||  ||||||||          ||    
T  21486 gattcgaagaatcctaatcgctacttacttttctgaaaccaaaa-caggtaaacttcctctgttgcaaacaaataaaaattgcaactt----------aa 21398  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattactt 238  Q
    |||||||| ||||||||||||||||||| ||||||  |||| || | ||||||  ||||||  |||||||| |||| ||||||||| ||||||||||||    
T  21397 cttttataccgtcaaacttacaaaaatatgtaacaagaattgttcggacgaaaggacaatccctgtggatatgatactctacttatcactttattactt 21299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 221
Target Start/End: Complemental strand, 652 - 482
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||| | |||||| |||||| |||| |||  ||||||||           |    
T  652 gattcgaagaatcctaaccgctgcttacttttctgcaacc-aaaacaggtaaattcgctctgttgcaaacagataaaaattgcaactt-----------a 565  T
Q  140 cttttatatcgtc-aaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctac 221  Q
    ||||||||  ||| |||||||||||||||| |||||  |||| || | ||||||  |||||| |||||||||||||| |||||    
T  564 cttttatactgtcaaaacttacaaaaataattaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctac 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 72253 - 72159
Alignment:
Q  19 tccaataatataaacagatgagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    ||||| |||||||||||| | ||||||||| ||||| ||  ||||||||||||||||||| ||||| | |||||||||||||| |||||| ||||    
T  72253 tccaacaatataaacagaggggattcgaagaatccttactactgcttacttttctgcaactaaaaatacgtaaacttgctctgttgcaaacagat 72159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 72125 - 72072
Alignment:
Q  208 atacgatattctacttattactttattacttggtaaacaattcagtacacttac 261  Q
    |||| ||| ||||||||| ||||||||||||||| |||||||  ||||||||||    
T  72125 ataccatactctacttatcactttattacttggttaacaatttggtacacttac 72072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 15868 - 15800
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaat 109  Q
    ||||||||| || |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  15868 gattcgaagaatactaaccgctgcttacttttccgcaaccaaaaacaggt-aacttgctctgttgcaaat 15800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 6385 - 6303
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||  | |||| |||| |||||||||||||| |||||||||||||| | ||||||| |||||||||||| ||||||    
T  6385 aaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatacgatactttacttatgactttattacttcgtaaac 6303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 39655 - 39586
Alignment:
Q  190 aaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||| |||||||||||||  ||||||||| |||||||||||||||||| ||||  ||||||||    
T  39655 aaacaacaatcaatgtggatacgatgctctacttatcactttattacttggtaaataattttgtacactt 39586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 39792 - 39735
Alignment:
Q  54 taaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagat 113  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||    
T  39792 taaccgctgcttacttttctgcaacc-aaaacaggt-aacttgctctgttgcaaacagat 39735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 181706 - 181786
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaa 243  Q
    |||||||||||||| | ||||||| || |||| ||||||||||||||||||||| || | |||| |||||||||||||||||    
T  181706 aaaataagtaacacgacttatttggacaaaacgacaatctatgtggatacgatactc-atttatcactttattacttggtaa 181786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 11338 - 11242
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||  |||||| ||||   |||||||||||| |||| |||| |||| ||||||||| ||||||||| ||| ||||||||| |||||||||    
T  11338 aaataagtaatgcaaattgtttggttgaaacaacaatccatgtagatatgatactctacttatcactttattatttgataaacaatttagtacactt 11242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 239
Target Start/End: Complemental strand, 76626 - 76439
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    ||||||||| ||||||| || ||||||||||||| |||||||||||||||||| ||||| || || ||| | || |||| ||||||           |||    
T  76626 gattcgaagaatcctaatcggtgcttacttttctacaaccaaaaacaggtaaatttgctatgttgtaaacatataaaatttgcaac-----------taa 76538  T
Q  140 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctactta-ttactttattactt 238  Q
    |||||||| | ||||   |||||||||||||||||  |||| || | |||||| |||||||  |||||||| |||| |||||||| | ||||||||||||    
T  76537 cttttataccctcaa--ctacaaaaataagtaacaagaattgttcggacgaaagaacaatccctgtggatatgatactctacttactaactttattactt 76440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 234465 - 234362
Alignment:
Q  137 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    |||||||||||  || |||||||||||||||||| |||  |||| || | ||||||  ||||||| ||||| ||||||| | ||||||| ||||||||||    
T  234465 taacttttatagagttaaacttacaaaaataagtgacaagaattgttcggacgaaaggacaatctctgtgggtacgatactatacttatcactttattac 234366  T
Q  237 ttgg 240  Q
    ||||    
T  234365 ttgg 234362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 48162 - 48273
Alignment:
Q  130 taacccttaacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattact 229  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| | || || |||| |||||   |||||| ||   ||||||||| ||||||||| |||    
T  48162 taacccttatcttttacatcgtcaa-cttacaaaaataagtaagagaa-ttgtttggacgaattgacaatccata--gatacgatactctacttatcact 48257  T
Q  230 ttattacttggtaaac 245  Q
    ||||||||||||||||    
T  48258 ttattacttggtaaac 48273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 54960 - 54862
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaa-caacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||| |||  |||||  |||||| | ||||||  ||||||||| ||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  54960 aaaataagtaacgcaagctatttagacgaaaacgacaatccctgtggatacaatactctacttatcactttattacttggtaaacgatttggtacactt 54862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 245
Target Start/End: Original strand, 266 - 472
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgca--actttataaccc-t 136  Q
    ||||||||| |||||||| ||||||||  |||||  ||||||||||||||  |||||||||  |||||  |||| |||  ||||  ||||| |||||| |    
T  266 gattcgaagaatcctaacggctgcttatatttctaaaaccaaaaacaggt-tacttgctctattgcaagcagataaaaattgcaagactttctaaccctt 364  T
Q  137 taacttttatatcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattac 236  Q
    || ||||||||||||| |||||| | |||||  ||||   |||| |||| ||||||  ||||||  ||| ||||||||| ||||| ||| ||||||||||    
T  365 tatcttttatatcgtc-aacttatataaatatctaacgagaattgtttggacgaaatgacaatccctgttgatacgatactctacgtatcactttattac 463  T
Q  237 ttggtaaac 245  Q
    || ||||||    
T  464 tttgtaaac 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 15498 - 15547
Alignment:
Q  195 acaatctatgtggatacgatattctacttattactttattacttggtaaa 244  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||||||||    
T  15498 acaatccatgtggatacgatactctacatattactttattacttggtaaa 15547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 168299 - 168395
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||| |  |||||  | ||||| ||||||  ||||||||||||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  168299 aaaataagtaacacgagctatttagaagaaacgacaatcc-tgtggatacgatactctacttatcactttattacttggtaaacgatttggtacactt 168395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 69301 - 69204
Alignment:
Q  41 attcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataaccctta 138  Q
    |||| ||| ||||||||||||||||| |||||||||   || ||||||||||||| ||||| |||||| |||| |||  ||||| | |||||||||||    
T  69301 attctaagaatcctaaccgctgcttatttttctgcatgtaagaacaggtaaactttctctgttgcaaacagataaaaattgcaattctataaccctta 69204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 3856 - 3801
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaactt 95  Q
    |||| |||| ||||||||||| |||||||||||||||| |||||| ||||||||||    
T  3856 gattggaagaatcctaaccgcagcttacttttctgcaaacaaaaataggtaaactt 3801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 1792 - 1734
Alignment:
Q  203 tgtggatacgatattctacttattactttattacttggtaaacaattcagtacacttac 261  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||| ||  ||||||||||    
T  1792 tgtggatacgatactctacttatcacttttttacttggtaaacagtttggtacacttac 1734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 4484 - 4566
Alignment:
Q  163 aaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaac 245  Q
    ||||||||||||| |||| ||| |||||||  |||||| |||||||||||||| ||| ||||  | ||| |||||||||||||    
T  4484 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaac 4566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 807 - 730
Alignment:
Q  182 tttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||| ||||||| ||||||  ||| ||||| ||| ||||||||| ||||||||||||||||||| |||  ||||||||    
T  807 tttggacgaaacgacaatccttgttgatacaatactctacttatcactttattacttggtaaacgatttggtacactt 730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 245
Target Start/End: Complemental strand, 35759 - 35553
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaactttataacccttaa 139  Q
    |||| |||| ||| |||||||||||||| ||||||||||||||| ||||||| |||||| || |||| | | || |||  ||||| | | |||||||| |    
T  35759 gatttgaagaatcttaaccgctgcttacctttctgcaaccaaaa-caggtaa-cttgctttgttgcagacaaataaaaattgcaaatctctaacccttta 35662  T
Q  140 ---cttttat---atcgtcaaacttacaaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttat 233  Q
       |||||||   ||| |||||||||   ||||||||||  | |||| |||| ||||||| | |||| |||||||||| ||| |||| |||| |||||||    
T  35661 actcttttattttatcatcaaactta---aaataagtaaggcgaattgtttggacgaaacgaaaatccatgtggatacaatactctatttatcactttat 35565  T
Q  234 tacttggtaaac 245  Q
    |||||| |||||    
T  35564 tacttgataaac 35553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 2818 - 2882
Alignment:
Q  162 aaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttatt 226  Q
    |||||||||||||| |||| |||| ||||||| |||||  |||||||||||||| || |||||||    
T  2818 aaaataagtaacacgaattgtttggacgaaacgacaattcatgtggatacgatactcaacttatt 2882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 6592 - 6644
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaa 92  Q
    ||||||||| ||||| |||||||||||||||| || ||||||||||| |||||    
T  6592 gattcgaagaatcctgaccgctgcttacttttttgaaaccaaaaacaagtaaa 6644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 5982 - 6068
Alignment:
Q  40 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgctgcaaatagattaaatatgcaact 126  Q
    ||||||||| ||||| |||| | ||||||||||| |||||||||||| ||||| | |||||  |||||| |||| |||  |||||||    
T  5982 gattcgaagaatcctgaccgttacttacttttctacaaccaaaaacaagtaaattcgctctattgcaaacagataaaaattgcaact 6068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 2435 - 2372
Alignment:
Q  196 caatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||| |||||||||||||| |||||||||  |||||||| ||||||||| |||  ||||||||    
T  2435 caatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacactt 2372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 2466 - 2403
Alignment:
Q  196 caatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||| |||||||||||||| |||||||||  |||||||| ||||||||| |||  ||||||||    
T  2466 caatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacactt 2403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 3352 - 3314
Alignment:
Q  54 taaccgctgcttacttttctgcaaccaaaaacaggtaaa 92  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  3352 taaccgctgcttacttttctataaccaaaaacaggtaaa 3314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 3210 - 3155
Alignment:
Q  203 tgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    ||||||||||||| ||||| ||  |||||||||||||||||||||||  ||||||||    
T  3210 tgtggatacgatactctacatac-actttattacttggtaaacaattttgtacactt 3155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 30006 - 29909
Alignment:
Q  161 aaaaataagtaacacaaattatttgaacgaaacaacaatctatgtggatacgatattctacttattactttattacttggtaaacaattcagtacactt 259  Q
    |||||||||||||  ||||| |||||  || || ||||||| | ||||||| ||| ||||||||  ||||||||||||||||||| |||  ||||||||    
T  30006 aaaaataagtaacgtaaattgtttgacagatacgacaatctctatggataccatactctacttac-actttattacttggtaaacgatttggtacactt 29909  T

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Target: scaffold0043 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 89742 - 89774
Alignment:
Q  51 tcctaaccgctgcttacttttctgcaaccaaaa 83  Q
    |||||||||||||||| ||||||||||||||||    
T  89742 tcctaaccgctgcttatttttctgcaaccaaaa 89774  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 114699 - 114659
Alignment:
Q  51 tcctaaccgctgcttacttttctgcaaccaaaaacaggtaa 91  Q
    ||||||||| || || |||||||||||||||||||||||||    
T  114699 tcctaaccgttgtttccttttctgcaaccaaaaacaggtaa 114659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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